Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0004570

Physical Location & Seq

Genomic Coordinates Forward (+)

18538360 .. 18541761

Gene Structure 3402 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0208300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2052 bp

ATGCCGAGGCGCCACAACAACGACATGGACCTGATGATCCCCGGGAAGATCAGAAAGCGAGGCTGCTCGTCGTCGGCTTCGTCTTCGTCTTCGATCATCCAGAACTACAGATTCAAGCGGGCGATTCTGGTAGGGAAGCGGGGCGGATCCACTACGCCCGTGCCTACCTGGAAGCTCATGGGATCCAGGTCCCCCGCGTCCGCATTGCGGGGGGCCATGGAGTCTCCCAAGTACGCGCCGTCGCAGGGCGGCGGCGTTTCGAAGGGGAAACAGTCACCGAGGCCTCCGGTGTCGGCGAGGAAGCTGGCGGCGACGCTGTGGGAAATGAACGACGTGCCGTCGCCGAGAGTGAAGGAAGAGGTGGATGAGCGGAGGATGAGGAAGGAGATTAGGGCCAGAGAGAAAGAGAGGGTTGCTCGGTCTCTGCGCTCGGGTTCTCTGCCTCCTCATCTCTCCGATCCGTCGCACAGTCCCGTTTCAGAGAGGATGGATCGATCTGGAACAGGTAGTTTCCACAGAAGGTCATCCTCTATTTCACAGAGGCTCAGGCTTACAGATCAACATTCTGGAATATTGGATTCTCATGGAAATGGCAGCCTAATGGAGGTTGAGTCTCGATCAAGAGCCCAGACTCCGACTAGATCGAGAGCTCAGACTCCTAGTGCTTCAACTGTTGGAATCAAGCCACGTTTGAAGGATGTTAGTAATGCTCTGACAACGTCTAAAGAGCTACTGAAAATTATACACCGCATTTGGGGTAATGAAGATCAGCCTTCATCTAGCATGGCCCTTATCTCAGCCTTACATGCTGAGCTAGAGAGGGCTCGTTTGCTGGTGAATCAGCATATCCACGAACAGCGCTCAGAGCAGAATGAGATCAGCTATCTCATGAAGTGTTTTGCTGAAGAAAAGGCAGCTTGGAAAAGCAAGGAGCACAAAGTAGTTGAGGCTGCCATCGAGTCTGTTGCAGAAGAACTTGAGGTAGAGAGAAAACTGAGAAGGAGGCTTGAAAACTTGAACAAGAAACTCGGGAAAGAACTGGCAGAGACAAAAGCATCTCTCGTTAAGGCAGTCAAAGAACTTGAGAGTGAGAAGAGAACGAGAGAGATCATGGAACAAGTGTGTGATGAATTAGCCAGGGATATTAATGAAGATAAACTTGAAGCAGAGGAACTGAAGTGGGAGTCTGCAAAAGTTCGTGAAGAGGTCGAAAAGGAAAGGGAGATGATGCAGTTCTCTGATGTGCTGCGTGAGGGGAGAGCTCAAGAGAAACTCTCAGAGGCAAAATATCAGCTTGAGGAGAAGAATGCTGCTGTTGATATGTTGAGGAGTCAACTTGAAGCCTTTATGGGAAGTAAGAGAACAAAAGAAAAAGGACGCGGTTCTGCTCATCTGAAAGATGAAGATATTGCAGCCTATCTAAGTAGAACTTGCCTCGGTTCCCATCAGGGTGAAGAAAAAGATGAGGATGGAGGAGAAGTTGAAGATGGAGTAGAATGCGAAGAGGATTCTGCTGAAAGTGATTTGCATTCCATAGAATTAAGTATGGGCAACAATAACAAAAGCTATAACTGGAGTCATGCTTCTGTAGCTGCTCGGGATCCAAGATGGGCTCCAAATGATGACGAAGAAATCAAAGGGAGGAAGTCCATGTCAGGGAAGCCACCAAGAAAAAGCACTTCTTTGCAAAGGAGCATATCAGATGGATTGGAATGGGGCATGCAGACTGAAAGGCTCCAAAATTCAGGAGATAGGGTAGATTGGGAGAGCTTTCCCGACCTGGAGAGGCAAATGCAAGGAAAGGGTTGTGGAGACGAAATGCAGGGGTATAAATCATCGAAGGGTCTTAGGGACCAAATGTTATCTGGCTCTAGGTTTGGATCTGCTAGAGTTCATGCTAGTCCAACACGGCAGTGGGGGCAGCCATGGCCTTCACGAGATCCTACGAGTGCAGTTCACGATAGGCCTCCCTCTGTCCATGGCAGTGGTTCAAAGTCAAGACTAGCAGAGCTAAGAGGTGAAGGCCAGAATGGCAGAAGGTCTAAACGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0006810 GO:0006811 GO:0006812 GO:0006885 GO:0008150 GO:0012505 GO:0015672 GO:0031410 GO:0031982 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0044424 GO:0044444 GO:0044464 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0055067 GO:0055080 GO:0065007 GO:0065008 GO:0097708 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger

Protein Analysis

683

Amino Acids

76.7

Weight (kDa)

9.26

Isoelectric Point (pI)

56.85

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004570)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17630 AT3G17630
fragaria_vesca	FvH4_4g21880
malus_domestica	MD13G1136000.v1.1 MD16G1131400.v1.1
prunus_persica	Prupe.1G209400_v2.0.a1
pyrus_communis	pycom16g11580
rosa_chinensis	RchiOBHm_Chr3g0483861
rosa_laevigata	RLG00000007178 RLG00000023257
rosa_multiflora	Rmu_co8183874.1_g000001 Rmu_co8462775.1_g000001 Rmu_sc0004940.1_g000012 Rmu_sc0005901.1_g000001 Rmu_sc0009599.1_g000012
rosa_roxburghii	Rroxscaffold_5G00369850 Rroxscaffold_6G00398090
rosa_rugosa	Rorug03G0208200.1 Rorug03G0208300 Rorug04G0222700 Rorug04G0222800
rosa_samantha	Rh3AG257000 Rh3BG293400 Rh3CG291700 Rh3DG286700 Rh4AG279900 Rh4AG280100 Rh4BG285300 Rh4BG285500 Rh4CG300900
rosa_wichuraiana	Rw3G023230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	9
AccBSI	CCGCTC	1 cut(s)	370
AccII	CGCG	3 cut(s)	197, 236, 1380
AcsI	RAATTY	1 cut(s)	1741
AcuI	CTGAAG	2 cut(s)	924, 1196
AcyI	GRCGYC	1 cut(s)	10
AfaI	GTAC	1 cut(s)	233
AfeI	AGCGCT	1 cut(s)	860
AfiI	CCNNNNNNNGG	5 cut(s)	207, 245, 604, 754, 1656
AgsI	TTSAA	9 cut(s)	115, 669, 694, 1010, 1018, 1163, 1340, 1484, 1992
AhdI	GACNNNNNGTC	1 cut(s)	337
AjiI	CACGTC	1 cut(s)	334
AjnI	CCWGG	4 cut(s)	167, 185, 1136, 1779
AleI	CACNNNNGTG	1 cut(s)	1912
Alw21I	GWGCWC	3 cut(s)	652, 936, 1264
Alw26I	GTCTC	5 cut(s)	228, 426, 618, 1040, 1806
Ama87I	CYCGRG	4 cut(s)	41, 430, 1028, 1596
Aor51HI	AGCGCT	1 cut(s)	860
AoxI	GGCC	7 cut(s)	213, 281, 393, 786, 1928, 1964, 2023
ApeKI	GCWGC	9 cut(s)	63, 594, 914, 950, 1246, 1310, 1412, 1592, 1921
ApoI	RAATTY	1 cut(s)	1741
AseI	ATTAAT	1 cut(s)	1146
AspLEI	GCGC	4 cut(s)	12, 238, 429, 861
AspS9I	GGNCC	6 cut(s)	28, 189, 213, 393, 787, 1852
AsuC2I	CCSGG	2 cut(s)	42, 43
AsuHPI	GGTGA	4 cut(s)	267, 847, 1463, 2030
AsuII	TTCGAA	1 cut(s)	260
AvaI	CYCGRG	4 cut(s)	41, 430, 1028, 1596
AvaII	GGWCC	3 cut(s)	28, 189, 1852
BamHI	GGATCC	3 cut(s)	146, 182, 1600
BanI	GGYRCC	1 cut(s)	9
BanII	GRGCYC	5 cut(s)	628, 652, 826, 1264, 1615
BauI	CACGAG	1 cut(s)	1935
BbsI	GAAGAC	2 cut(s)	75, 81
Bbv12I	GWGCWC	3 cut(s)	652, 936, 1264
BbvI	GCAGC	9 cut(s)	50, 606, 926, 937, 1233, 1297, 1424, 1579, 1933
BccI	CCATC	7 cut(s)	481, 962, 1452, 1463, 1481, 1602, 1697
BceAI	ACGGC	3 cut(s)	223, 322, 1925
BcgI	CGANNNNNNTGC	2 cut(s)	947, 981
BciT130I	CCWGG	4 cut(s)	169, 187, 1138, 1781
BcnI	CCSGG	2 cut(s)	42, 43
BcoDI	GTCTC	5 cut(s)	228, 426, 618, 1040, 1806
BfaI	CTAG	8 cut(s)	639, 660, 780, 815, 1872, 1887, 1899, 2003
BfmI	CTRYAG	2 cut(s)	106, 1587
BfoI	RGCGCY	2 cut(s)	13, 862
BglI	GCCNNNNNGGC	1 cut(s)	2031
BlpI	GCTNAGC	1 cut(s)	810
Bme1390I	CCNGG	6 cut(s)	42, 43, 169, 187, 1138, 1781
Bme18I	GGWCC	3 cut(s)	28, 189, 1852
BmeRI	GACNNNNNGTC	1 cut(s)	337
BmeT110I	CYCGRG	4 cut(s)	41, 430, 1028, 1596
BmgBI	CACGTC	1 cut(s)	334
BmgT120I	GGNCC	6 cut(s)	28, 189, 213, 393, 787, 1852
BmrFI	CCNGG	6 cut(s)	42, 43, 169, 187, 1138, 1781
BmsI	GCATC	2 cut(s)	1064, 1218
BpiI	GAAGAC	2 cut(s)	75, 81
BplI	GAGNNNNNCTC	4 cut(s)	400, 432, 1259, 1291
BpmI	CTGGAG	2 cut(s)	1594, 1802
Bpu10I	CCTNAGC	1 cut(s)	545
Bpu1102I	GCTNAGC	1 cut(s)	810
Bpu14I	TTCGAA	1 cut(s)	260
BpuEI	CTTGAG	4 cut(s)	998, 1103, 1248, 1316
BpuMI	CCSGG	2 cut(s)	42, 43
Bsa29I	ATCGAT	1 cut(s)	493
BsaHI	GRCGYC	1 cut(s)	10
BsaI	GGTCTC	1 cut(s)	426
BsaJI	CCNNGG	9 cut(s)	5, 40, 41, 216, 278, 1137, 1435, 1925, 1978
BsaWI	WCCGGW	1 cut(s)	286
BsaXI	ACNNNNNCTCC	6 cut(s)	596, 626, 1464, 1494, 1740, 1770
Bsc4I	CCNNNNNNNGG	5 cut(s)	207, 245, 604, 754, 1656
Bse1I	ACTGG	2 cut(s)	1044, 1577
Bse3DI	GCAATG	1 cut(s)	203
BseBI	CCWGG	4 cut(s)	169, 187, 1138, 1781
BseCI	ATCGAT	1 cut(s)	493
BseDI	CCNNGG	9 cut(s)	5, 40, 41, 216, 278, 1137, 1435, 1925, 1978
BseGI	GGATG	7 cut(s)	96, 370, 381, 492, 524, 703, 1474
BseLI	CCNNNNNNNGG	5 cut(s)	207, 245, 604, 754, 1656
BseMI	GCAATG	1 cut(s)	203
BseMII	CTCAG	7 cut(s)	559, 665, 801, 810, 876, 986, 1290
BseNI	ACTGG	2 cut(s)	1044, 1577
BseRI	GAGGAG	4 cut(s)	435, 1313, 1342, 1488
BseXI	GCAGC	9 cut(s)	50, 606, 926, 937, 1233, 1297, 1424, 1579, 1933
BsgI	GTGCAG	1 cut(s)	1971
Bsh1236I	CGCG	3 cut(s)	197, 236, 1380
BshFI	GGCC	7 cut(s)	215, 283, 395, 788, 1930, 1966, 2025
BshNI	GGYRCC	1 cut(s)	9
BshVI	ATCGAT	1 cut(s)	493
BsiHKAI	GWGCWC	3 cut(s)	652, 936, 1264
BsiHKCI	CYCGRG	4 cut(s)	41, 430, 1028, 1596
BsiSI	CCGG	2 cut(s)	42, 287
BslFI	GGGAC	3 cut(s)	175, 456, 1865
BslI	CCNNNNNNNGG	5 cut(s)	207, 245, 604, 754, 1656
BsmAI	GTCTC	5 cut(s)	228, 426, 618, 1040, 1806
BsmBI	CGTCTC	1 cut(s)	1806
BsmFI	GGGAC	3 cut(s)	175, 456, 1865
BsmI	GAATGC	3 cut(s)	1312, 1502, 1528
BsnI	GGCC	7 cut(s)	215, 283, 395, 788, 1930, 1966, 2025
Bso31I	GGTCTC	1 cut(s)	426
BsoBI	CYCGRG	4 cut(s)	41, 430, 1028, 1596
Bsp119I	TTCGAA	1 cut(s)	260
Bsp1286I	GDGCHC	6 cut(s)	628, 652, 826, 936, 1264, 1615
Bsp1720I	GCTNAGC	1 cut(s)	810
Bsp19I	CCATGG	3 cut(s)	216, 1925, 1978
BspANI	GGCC	7 cut(s)	215, 283, 395, 788, 1930, 1966, 2025
BspCNI	CTCAG	7 cut(s)	558, 664, 802, 809, 875, 987, 1289
BspDI	ATCGAT	1 cut(s)	493
BspFNI	CGCG	3 cut(s)	197, 236, 1380
BspHI	TCATGA	1 cut(s)	888
BspT104I	TTCGAA	1 cut(s)	260
BspT107I	GGYRCC	1 cut(s)	9
BspTNI	GGTCTC	1 cut(s)	426
BsrBI	CCGCTC	1 cut(s)	370
BsrDI	GCAATG	1 cut(s)	203
BsrI	ACTGG	2 cut(s)	1044, 1577
BssECI	CCNNGG	9 cut(s)	5, 40, 41, 216, 278, 1137, 1435, 1925, 1978
BssNI	GRCGYC	1 cut(s)	10
BssSI	CACGAG	1 cut(s)	1935
BssT1I	CCWWGG	3 cut(s)	216, 1925, 1978
Bst2BI	CACGAG	1 cut(s)	1935
Bst2UI	CCWGG	4 cut(s)	169, 187, 1138, 1781
Bst4CI	ACNGT	4 cut(s)	273, 470, 673, 2049
Bst6I	CTCTTC	4 cut(s)	351, 1088, 1197, 1497
BstACI	GRCGYC	1 cut(s)	10
BstBI	TTCGAA	1 cut(s)	260
BstC8I	GCNNGC	3 cut(s)	120, 306, 1721
BstDSI	CCRYGG	3 cut(s)	216, 1925, 1978
BstENI	CCTNNNNNAGG	1 cut(s)	602
BstF5I	GGATG	7 cut(s)	96, 370, 381, 492, 524, 703, 1474
BstFNI	CGCG	3 cut(s)	197, 236, 1380
BstH2I	RGCGCY	2 cut(s)	13, 862
BstHHI	GCGC	4 cut(s)	12, 238, 429, 861
BstMAI	GTCTC	5 cut(s)	228, 426, 618, 1040, 1806
BstMWI	GCNNNNNNNGC	6 cut(s)	806, 865, 1589, 1918, 1927, 2031
BstNI	CCWGG	4 cut(s)	169, 187, 1138, 1781
BstNSI	RCATGY	2 cut(s)	809, 1723
BstSCI	CCNGG	6 cut(s)	40, 41, 167, 185, 1136, 1779
BstSFI	CTRYAG	2 cut(s)	106, 1587
BstUI	CGCG	3 cut(s)	197, 236, 1380
BstV1I	GCAGC	9 cut(s)	50, 606, 926, 937, 1233, 1297, 1424, 1579, 1933
BstV2I	GAAGAC	2 cut(s)	75, 81
BstX2I	RGATCY	5 cut(s)	146, 182, 1600, 1880, 1939
BstXI	CCANNNNNNTGG	1 cut(s)	1985
BstYI	RGATCY	5 cut(s)	146, 182, 1600, 1880, 1939
Bsu15I	ATCGAT	1 cut(s)	493
BsuRI	GGCC	7 cut(s)	215, 283, 395, 788, 1930, 1966, 2025
BsuTUI	ATCGAT	1 cut(s)	493
BtgI	CCRYGG	3 cut(s)	216, 1925, 1978
BtrI	CACGTC	1 cut(s)	334
BtsCI	GGATG	7 cut(s)	96, 370, 381, 492, 524, 703, 1474
BtsI	GCAGTG	2 cut(s)	1919, 1990
BtsIMutI	CAGTG	2 cut(s)	1919, 1990
Cac8I	GCNNGC	3 cut(s)	120, 306, 1721
CciI	TCATGA	1 cut(s)	888
CfoI	GCGC	4 cut(s)	12, 238, 429, 861
Cfr13I	GGNCC	6 cut(s)	28, 189, 213, 393, 787, 1852
Cfr9I	CCCGGG	1 cut(s)	41
ClaI	ATCGAT	1 cut(s)	493
CseI	GACGC	3 cut(s)	186, 322, 1386
Csp6I	GTAC	1 cut(s)	232
CviQI	GTAC	1 cut(s)	232
DinI	GGCGCC	1 cut(s)	11
DriI	GACNNNNNGTC	1 cut(s)	337
Eam1104I	CTCTTC	4 cut(s)	351, 1088, 1197, 1497
Eam1105I	GACNNNNNGTC	1 cut(s)	337
EarI	CTCTTC	4 cut(s)	351, 1088, 1197, 1497
EciI	GGCGGA	1 cut(s)	159
Ecl136II	GAGCTC	2 cut(s)	650, 1262
Eco130I	CCWWGG	3 cut(s)	216, 1925, 1978
Eco147I	AGGCCT	2 cut(s)	283, 1966
Eco24I	GRGCYC	5 cut(s)	628, 652, 826, 1264, 1615
Eco31I	GGTCTC	1 cut(s)	426
Eco47I	GGWCC	3 cut(s)	28, 189, 1852
Eco47III	AGCGCT	1 cut(s)	860
Eco53kI	GAGCTC	2 cut(s)	650, 1262
Eco57I	CTGAAG	2 cut(s)	924, 1196
Eco88I	CYCGRG	4 cut(s)	41, 430, 1028, 1596
EcoICRI	GAGCTC	2 cut(s)	650, 1262
EcoNI	CCTNNNNNAGG	1 cut(s)	602
EcoO109I	RGGNCCY	1 cut(s)	189
EcoRII	CCWGG	4 cut(s)	167, 185, 1136, 1779
EcoT14I	CCWWGG	3 cut(s)	216, 1925, 1978
EcoT38I	GRGCYC	5 cut(s)	628, 652, 826, 1264, 1615
EgeI	GGCGCC	1 cut(s)	11
EheI	GGCGCC	1 cut(s)	11
ErhI	CCWWGG	3 cut(s)	216, 1925, 1978
Esp3I	CGTCTC	1 cut(s)	1806
FalI	AAGNNNNNCTT	6 cut(s)	1143, 1175, 1414, 1446, 1666, 1698
FaqI	GGGAC	3 cut(s)	175, 456, 1865
FauI	CCCGC	4 cut(s)	111, 132, 201, 202
FokI	GGATG	7 cut(s)	83, 377, 388, 499, 511, 710, 1481
FriOI	GRGCYC	5 cut(s)	628, 652, 826, 1264, 1615
FspBI	CTAG	8 cut(s)	639, 660, 780, 815, 1872, 1887, 1899, 2003
GlaI	GCGC	4 cut(s)	11, 237, 428, 860
GsuI	CTGGAG	2 cut(s)	1594, 1802
HaeII	RGCGCY	2 cut(s)	13, 862
HaeIII	GGCC	7 cut(s)	215, 283, 395, 788, 1930, 1966, 2025
HapII	CCGG	2 cut(s)	42, 287
HgaI	GACGC	3 cut(s)	186, 322, 1386
HhaI	GCGC	4 cut(s)	12, 238, 429, 861
Hin1I	GRCGYC	1 cut(s)	10
Hin6I	GCGC	4 cut(s)	10, 236, 427, 859
HinP1I	GCGC	4 cut(s)	10, 236, 427, 859
HincII	GTYRAC	1 cut(s)	1334
HindII	GTYRAC	1 cut(s)	1334
HpaII	CCGG	2 cut(s)	42, 287
HphI	GGTGA	4 cut(s)	267, 847, 1463, 2030
Hpy166II	GTNNAC	2 cut(s)	1334, 1957
Hpy8I	GTNNAC	2 cut(s)	1334, 1957
Hpy99I	CGWCG	7 cut(s)	73, 76, 244, 316, 335, 343, 466
HpyCH4III	ACNGT	4 cut(s)	273, 470, 673, 2049
HpyCH4IV	ACGT	3 cut(s)	333, 688, 719
HpyF10VI	GCNNNNNNNGC	6 cut(s)	806, 865, 1589, 1918, 1927, 2031
HpySE526I	ACGT	3 cut(s)	333, 688, 719
Hsp92I	GRCGYC	1 cut(s)	10
HspAI	GCGC	4 cut(s)	10, 236, 427, 859
KasI	GGCGCC	1 cut(s)	9
LmnI	GCTCC	4 cut(s)	931, 1618, 1692, 1740
Lsp1109I	GCAGC	9 cut(s)	50, 606, 926, 937, 1233, 1297, 1424, 1579, 1933
LweI	GCATC	2 cut(s)	1064, 1218
MaeI	CTAG	8 cut(s)	639, 660, 780, 815, 1872, 1887, 1899, 2003
MaeII	ACGT	3 cut(s)	333, 688, 719
MaeIII	GTNAC	1 cut(s)	273
MbiI	CCGCTC	1 cut(s)	370
MflI	RGATCY	5 cut(s)	146, 182, 1600, 1880, 1939
MhlI	GDGCHC	6 cut(s)	628, 652, 826, 936, 1264, 1615
MluCI	AATT	4 cut(s)	738, 1130, 1538, 1741
Mly113I	GGCGCC	1 cut(s)	10
MlyI	GAGTC	8 cut(s)	230, 620, 625, 649, 968, 1193, 1339, 1585
MmeI	TCCRAC	3 cut(s)	655, 659, 1928
MseI	TTAA	3 cut(s)	1065, 1146, 1541
MslI	CAYNNNNRTG	4 cut(s)	588, 1449, 1912, 1983
MspI	CCGG	2 cut(s)	42, 287
MspR9I	CCNGG	6 cut(s)	42, 43, 169, 187, 1138, 1781
Mva1269I	GAATGC	3 cut(s)	1312, 1502, 1528
MvaI	CCWGG	4 cut(s)	169, 187, 1138, 1781
MvnI	CGCG	3 cut(s)	197, 236, 1380
MwoI	GCNNNNNNNGC	6 cut(s)	806, 865, 1589, 1918, 1927, 2031
NarI	GGCGCC	1 cut(s)	10
NciI	CCSGG	2 cut(s)	42, 43
NcoI	CCATGG	3 cut(s)	216, 1925, 1978
NmeAIII	GCCGAG	2 cut(s)	30, 369
NmuCI	GTSAC	1 cut(s)	273
NspI	RCATGY	2 cut(s)	809, 1723
NspV	TTCGAA	1 cut(s)	260
OliI	CACNNNNGTG	1 cut(s)	1912
PaeI	GCATGC	1 cut(s)	1723
PagI	TCATGA	1 cut(s)	888
PceI	AGGCCT	2 cut(s)	283, 1966
PcsI	WCGNNNNNNNCGW	1 cut(s)	77
PctI	GAATGC	3 cut(s)	1312, 1502, 1528
PfeI	GAWTC	6 cut(s)	111, 124, 578, 678, 838, 1508
PflFI	GACNNNGTC	1 cut(s)	718
PleI	GAGTC	8 cut(s)	229, 619, 625, 649, 967, 1192, 1338, 1584
PluTI	GGCGCC	1 cut(s)	13
PpsI	GAGTC	8 cut(s)	229, 619, 625, 649, 967, 1192, 1338, 1584
PpuMI	RGGWCCY	1 cut(s)	189
PshBI	ATTAAT	1 cut(s)	1146
Psp124BI	GAGCTC	2 cut(s)	652, 1264
Psp5II	RGGWCCY	1 cut(s)	189
Psp6I	CCWGG	4 cut(s)	167, 185, 1136, 1779
PspGI	CCWGG	4 cut(s)	167, 185, 1136, 1779
PspPI	GGNCC	6 cut(s)	28, 189, 213, 393, 787, 1852
PspPPI	RGGWCCY	1 cut(s)	189
PsuI	RGATCY	5 cut(s)	146, 182, 1600, 1880, 1939
PsyI	GACNNNGTC	1 cut(s)	718
RsaI	GTAC	1 cut(s)	233
RsaNI	GTAC	1 cut(s)	232
RseI	CAYNNNNRTG	4 cut(s)	588, 1449, 1912, 1983
SacI	GAGCTC	2 cut(s)	652, 1264
SaqAI	TTAA	3 cut(s)	1065, 1146, 1541
Sau96I	GGNCC	6 cut(s)	28, 189, 213, 393, 787, 1852
SchI	GAGTC	8 cut(s)	230, 620, 625, 649, 968, 1193, 1339, 1585
ScrFI	CCNGG	6 cut(s)	42, 43, 169, 187, 1138, 1781
SduI	GDGCHC	6 cut(s)	628, 652, 826, 936, 1264, 1615
SfaNI	GCATC	2 cut(s)	1064, 1218
SfcI	CTRYAG	2 cut(s)	106, 1587
SfoI	GGCGCC	1 cut(s)	11
SfuI	TTCGAA	1 cut(s)	260
SinI	GGWCC	3 cut(s)	28, 189, 1852
SmaI	CCCGGG	1 cut(s)	43
SmiMI	CAYNNNNRTG	4 cut(s)	588, 1449, 1912, 1983
SmlI	CTYRAG	4 cut(s)	977, 1082, 1263, 1295
SmoI	CTYRAG	4 cut(s)	977, 1082, 1263, 1295
SphI	GCATGC	1 cut(s)	1723
Sse9I	AATT	4 cut(s)	738, 1130, 1538, 1741
SseBI	AGGCCT	2 cut(s)	283, 1966
SspDI	GGCGCC	1 cut(s)	9
SspI	AATATT	1 cut(s)	573
SspMI	CTAG	8 cut(s)	639, 660, 780, 815, 1872, 1887, 1899, 2003
SstI	GAGCTC	2 cut(s)	652, 1264
StuI	AGGCCT	2 cut(s)	283, 1966
StyD4I	CCNGG	6 cut(s)	40, 41, 167, 185, 1136, 1779
StyI	CCWWGG	3 cut(s)	216, 1925, 1978
TaaI	ACNGT	4 cut(s)	273, 470, 673, 2049
TaiI	ACGT	3 cut(s)	336, 691, 722
TaqI	TCGA	8 cut(s)	92, 260, 493, 616, 644, 957, 1209, 1838
TaqII	GACCGA	1 cut(s)	408
TasI	AATT	4 cut(s)	738, 1130, 1538, 1741
TauI	GCSGC	3 cut(s)	252, 255, 311
TfiI	GAWTC	6 cut(s)	111, 124, 578, 678, 838, 1508
Tru1I	TTAA	3 cut(s)	1065, 1146, 1541
Tru9I	TTAA	3 cut(s)	1065, 1146, 1541
TscAI	CASTG	2 cut(s)	1919, 1990
TseFI	GTSAC	1 cut(s)	273
TseI	GCWGC	9 cut(s)	63, 594, 914, 950, 1246, 1310, 1412, 1592, 1921
Tsp45I	GTSAC	1 cut(s)	273
TspDTI	ATGAA	8 cut(s)	341, 765, 777, 905, 1143, 1164, 1416, 1883
TspGWI	ACGGA	1 cut(s)	450
TspMI	CCCGGG	1 cut(s)	41
TspRI	CASTG	2 cut(s)	1919, 1990
Tth111I	GACNNNGTC	1 cut(s)	718
VpaK11BI	GGWCC	3 cut(s)	28, 189, 1852
VspI	ATTAAT	1 cut(s)	1146
XagI	CCTNNNNNAGG	1 cut(s)	602
XapI	RAATTY	1 cut(s)	1741
XceI	RCATGY	2 cut(s)	809, 1723
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1862, 1911
XmaI	CCCGGG	1 cut(s)	41
XspI	CTAG	8 cut(s)	639, 660, 780, 815, 1872, 1887, 1899, 2003

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.