AT3G46540

ENTH domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0003209
Physical Location & Seq
Reverse (-)
17133960 .. 17136152
2193 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G46540.1

Sequence Viewer

Length: 924 bp
ATGTCAATGATGAGCAGAACTCGAAGCAGCATCGCCATGGGAACACCATCTTTCCTTGAGTTGAAGAAACAAGCTTCATTTTTCTTCAAAGAGAAGCTTAAAACGGCGCGTTTAGCTCTCACCGATGTTACTCCTCTTCAACTAATGACTGAGGAAGCTACGGATGGTGAGTCATGTGGACCAAATACACAAACCTTAGGGTCCATTTCAAAGGCTGCTTTTGAGTTTGAAGATTACTTGGCGATTGTTGAAGTCTTGCACAAAAGATTGGCAAAGTTCGATAAGAGAAACTGGAGGATGGCTTATAACTCACTAATAGTTGTTGAGCATTTACTCACTCATGGACCAGAGAGTGTTTCCGATGAGTTTCAAGGTGATATAGATGTTATCTCCCAAATGCAAACCTTCCAACAGATTGACGAGAAAGGGTTTAATTGGGGATTAGCTGTTAGAAAGAAAGCAGAGAAGGTTTTAAAGCTACTTGAGAAAGGGGAATTACTTAAGGAAGAAAGGAAGCGAGCTCGTGAGCTGTCTCGAGGGATTCAAGGTTTCGGTAGCTTTAACCACAAGTCTTCATCTCATTCTTTGTCAGAGCATGAAGTCTTACAAGAATCTACAGTCTATAGGAAATGTAATTCCAATTTTACCAAGAATTACGATGAGGATGACCAAGAGAACACTATGGTTTCTCCTAATGACGCCAACCTTTTTCCTCAGCCGCTGGTAGCTGACCCGAGCGAGGAATCTAGGACGGGTATGAAAGAAAATATGGATCCTGAAGATGATGAGAACACAGAGGTAAACCCACTTTTGGGTTTTAGTAAAAAGGAGGGTCAAGAACTAGCCGGAGAAGACGAGAACCATCCATTTACGGATGGCGAGAGTAAGCATACAGTAGTCTTGCTTGATGAGAACACAGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04144 map04144
Pfam Domains
Protein Families
ENTH

Protein Analysis

307

Amino Acids

34.77

Weight (kDa)

4.96

Isoelectric Point (pI)

38.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ENTH PF01417 44 - 167 2.6e-34 ENTH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 306
AccII CGCG 1 cut(s) 109
AciI CCGC 1 cut(s) 719
AclWI GGATC 2 cut(s) 767, 780
AcuI CTGAAG 1 cut(s) 798
AcyI GRCGYC 1 cut(s) 699
AfiI CCNNNNNNNGG 3 cut(s) 739, 811, 812
AflII CTTAAG 1 cut(s) 500
AgsI TTSAA 8 cut(s) 64, 88, 140, 210, 230, 251, 371, 545
Alw21I GWGCWC 1 cut(s) 523
Alw26I GTCTC 1 cut(s) 537
AlwI GGATC 2 cut(s) 767, 780
AlwNI CAGNNNCTG 1 cut(s) 721
Ama87I CYCGRG 2 cut(s) 534, 733
ApeKI GCWGC 2 cut(s) 27, 215
AspLEI GCGC 1 cut(s) 109
AspS9I GGNCC 3 cut(s) 179, 201, 344
AsuHPI GGTGA 3 cut(s) 112, 179, 386
AvaI CYCGRG 2 cut(s) 534, 733
AvaII GGWCC 3 cut(s) 179, 201, 344
AxyI CCTNAGG 1 cut(s) 196
BamHI GGATCC 1 cut(s) 772
BanII GRGCYC 1 cut(s) 523
BauI CACGAG 1 cut(s) 522
BbsI GAAGAC 2 cut(s) 564, 858
Bbv12I GWGCWC 1 cut(s) 523
BbvCI CCTCAGC 1 cut(s) 714
BbvI GCAGC 2 cut(s) 39, 202
BccI CCATC 5 cut(s) 55, 158, 292, 869, 870
BceAI ACGGC 1 cut(s) 120
BcoDI GTCTC 1 cut(s) 537
BfaI CTAG 2 cut(s) 747, 842
BfmI CTRYAG 2 cut(s) 615, 622
BfrI CTTAAG 1 cut(s) 500
BisI GCNGC 3 cut(s) 28, 216, 719
BlsI GCNGC 3 cut(s) 29, 217, 720
Bme18I GGWCC 3 cut(s) 179, 201, 344
BmeT110I CYCGRG 2 cut(s) 534, 733
BmgT120I GGNCC 3 cut(s) 179, 201, 344
BmiI GGNNCC 2 cut(s) 202, 774
BmsI GCATC 1 cut(s) 39
BpiI GAAGAC 2 cut(s) 564, 858
BplI GAGNNNNNCTC 1 cut(s) 36
BpmI CTGGAG 1 cut(s) 313
Bpu10I CCTNAGC 1 cut(s) 714
BpuEI CTTGAG 2 cut(s) 77, 503
BsaHI GRCGYC 1 cut(s) 699
BsaJI CCNNGG 1 cut(s) 36
Bsc4I CCNNNNNNNGG 3 cut(s) 739, 811, 812
Bse1I ACTGG 1 cut(s) 296
Bse21I CCTNAGG 1 cut(s) 196
BseDI CCNNGG 1 cut(s) 36
BseGI GGATG 5 cut(s) 169, 303, 670, 862, 880
BseLI CCNNNNNNNGG 3 cut(s) 739, 811, 812
BseMII CTCAG 2 cut(s) 141, 728
BseNI ACTGG 1 cut(s) 296
BseRI GAGGAG 1 cut(s) 123
BseXI GCAGC 2 cut(s) 39, 202
Bsh1236I CGCG 1 cut(s) 109
BsiHKAI GWGCWC 1 cut(s) 523
BsiHKCI CYCGRG 2 cut(s) 534, 733
BsiSI CCGG 1 cut(s) 846
BslI CCNNNNNNNGG 3 cut(s) 739, 811, 812
BsmAI GTCTC 1 cut(s) 537
BsoBI CYCGRG 2 cut(s) 534, 733
Bsp1286I GDGCHC 1 cut(s) 523
Bsp143I GATC 1 cut(s) 772
Bsp19I CCATGG 1 cut(s) 36
BspACI CCGC 1 cut(s) 719
BspCNI CTCAG 2 cut(s) 142, 727
BspFNI CGCG 1 cut(s) 109
BspLI GGNNCC 2 cut(s) 202, 774
BspPI GGATC 2 cut(s) 767, 780
BspTI CTTAAG 1 cut(s) 500
BsrI ACTGG 1 cut(s) 296
BssECI CCNNGG 1 cut(s) 36
BssMI GATC 1 cut(s) 772
BssNI GRCGYC 1 cut(s) 699
BssSI CACGAG 1 cut(s) 522
BssT1I CCWWGG 1 cut(s) 36
Bst2BI CACGAG 1 cut(s) 522
Bst4CI ACNGT 2 cut(s) 619, 895
Bst6I CTCTTC 1 cut(s) 141
BstACI GRCGYC 1 cut(s) 699
BstAFI CTTAAG 1 cut(s) 500
BstC8I GCNNGC 1 cut(s) 519
BstDEI CTNAG 3 cut(s) 150, 196, 714
BstDSI CCRYGG 1 cut(s) 36
BstF5I GGATG 5 cut(s) 169, 303, 670, 862, 880
BstFNI CGCG 1 cut(s) 109
BstHHI GCGC 1 cut(s) 109
BstKTI GATC 1 cut(s) 775
BstMAI GTCTC 1 cut(s) 537
BstMBI GATC 1 cut(s) 772
BstMWI GCNNNNNNNGC 1 cut(s) 113
BstSFI CTRYAG 2 cut(s) 615, 622
BstUI CGCG 1 cut(s) 109
BstV1I GCAGC 2 cut(s) 39, 202
BstV2I GAAGAC 2 cut(s) 564, 858
BstX2I RGATCY 1 cut(s) 772
BstYI RGATCY 1 cut(s) 772
Bsu36I CCTNAGG 1 cut(s) 196
BtgI CCRYGG 1 cut(s) 36
BtgZI GCGATG 1 cut(s) 16
BtsCI GGATG 5 cut(s) 169, 303, 670, 862, 880
Cac8I GCNNGC 1 cut(s) 519
CaiI CAGNNNCTG 1 cut(s) 721
CfoI GCGC 1 cut(s) 109
Cfr13I GGNCC 3 cut(s) 179, 201, 344
CseI GACGC 1 cut(s) 707
CviAII CATG 4 cut(s) 37, 174, 341, 596
DdeI CTNAG 3 cut(s) 150, 196, 714
DpnI GATC 1 cut(s) 774
DpnII GATC 1 cut(s) 772
DraI TTTAAA 1 cut(s) 474
Eam1104I CTCTTC 1 cut(s) 141
EarI CTCTTC 1 cut(s) 141
Ecl136II GAGCTC 1 cut(s) 521
Eco130I CCWWGG 1 cut(s) 36
Eco24I GRGCYC 1 cut(s) 523
Eco47I GGWCC 3 cut(s) 179, 201, 344
Eco53kI GAGCTC 1 cut(s) 521
Eco57I CTGAAG 1 cut(s) 798
Eco81I CCTNAGG 1 cut(s) 196
Eco88I CYCGRG 2 cut(s) 534, 733
EcoICRI GAGCTC 1 cut(s) 521
EcoT14I CCWWGG 1 cut(s) 36
EcoT38I GRGCYC 1 cut(s) 523
ErhI CCWWGG 1 cut(s) 36
FaeI CATG 4 cut(s) 40, 177, 344, 599
FalI AAGNNNNNCTT 2 cut(s) 81, 113
FatI CATG 4 cut(s) 36, 173, 340, 595
Fnu4HI GCNGC 3 cut(s) 28, 216, 719
FokI GGATG 5 cut(s) 176, 310, 677, 849, 887
FriOI GRGCYC 1 cut(s) 523
Fsp4HI GCNGC 3 cut(s) 28, 216, 719
FspBI CTAG 2 cut(s) 747, 842
GlaI GCGC 1 cut(s) 108
GluI GCNGC 3 cut(s) 28, 216, 719
GsuI CTGGAG 1 cut(s) 313
HapII CCGG 1 cut(s) 846
HgaI GACGC 1 cut(s) 707
HhaI GCGC 1 cut(s) 109
Hin1I GRCGYC 1 cut(s) 699
Hin1II CATG 4 cut(s) 40, 177, 344, 599
Hin6I GCGC 1 cut(s) 107
HinP1I GCGC 1 cut(s) 107
HindIII AAGCTT 2 cut(s) 72, 95
HinfI GANTC 4 cut(s) 170, 541, 611, 743
HpaII CCGG 1 cut(s) 846
HphI GGTGA 3 cut(s) 112, 179, 386
Hpy166II GTNNAC 2 cut(s) 179, 802
Hpy188I TCNGA 2 cut(s) 361, 592
Hpy188III TCNNGA 4 cut(s) 524, 534, 776, 836
Hpy8I GTNNAC 2 cut(s) 179, 802
HpyAV CCTTC 2 cut(s) 415, 460
HpyCH4III ACNGT 2 cut(s) 619, 895
HpyCH4V TGCA 2 cut(s) 259, 400
HpyF10VI GCNNNNNNNGC 1 cut(s) 113
HpyF3I CTNAG 3 cut(s) 150, 196, 714
Hsp92I GRCGYC 1 cut(s) 699
Hsp92II CATG 4 cut(s) 40, 177, 344, 599
HspAI GCGC 1 cut(s) 107
Kzo9I GATC 1 cut(s) 772
LpnPI CCDG 5 cut(s) 277, 360, 707, 789, 859
Lsp1109I GCAGC 2 cut(s) 39, 202
LweI GCATC 1 cut(s) 39
MaeI CTAG 2 cut(s) 747, 842
MaeIII GTNAC 1 cut(s) 127
MalI GATC 1 cut(s) 774
MboI GATC 1 cut(s) 772
MboII GAAGA 8 cut(s) 76, 76, 128, 242, 518, 564, 791, 863
MflI RGATCY 1 cut(s) 772
MhlI GDGCHC 1 cut(s) 523
MluCI AATT 5 cut(s) 433, 494, 634, 640, 652
MlyI GAGTC 1 cut(s) 179
MmeI TCCRAC 1 cut(s) 433
MnlI CCTC 9 cut(s) 144, 145, 288, 530, 655, 723, 733, 790, 823
MseI TTAA 6 cut(s) 99, 432, 473, 501, 561, 922
MslI CAYNNNNRTG 1 cut(s) 35
MspA1I CMGCKG 1 cut(s) 721
MspCI CTTAAG 1 cut(s) 500
MspI CCGG 1 cut(s) 846
MvnI CGCG 1 cut(s) 109
MwoI GCNNNNNNNGC 1 cut(s) 113
NcoI CCATGG 1 cut(s) 36
NdeII GATC 1 cut(s) 772
NlaIII CATG 4 cut(s) 40, 177, 344, 599
NlaIV GGNNCC 2 cut(s) 202, 774
PaeR7I CTCGAG 1 cut(s) 534
PfeI GAWTC 3 cut(s) 541, 611, 743
PkrI GCNGC 3 cut(s) 29, 217, 720
PleI GAGTC 1 cut(s) 178
PpsI GAGTC 1 cut(s) 178
PsiI TTATAA 1 cut(s) 306
Psp124BI GAGCTC 1 cut(s) 523
PspN4I GGNNCC 2 cut(s) 202, 774
PspPI GGNCC 3 cut(s) 179, 201, 344
PstNI CAGNNNCTG 1 cut(s) 721
PsuI RGATCY 1 cut(s) 772
RseI CAYNNNNRTG 1 cut(s) 35
SacI GAGCTC 1 cut(s) 523
SaqAI TTAA 6 cut(s) 99, 432, 473, 501, 561, 922
SatI GCNGC 3 cut(s) 28, 216, 719
Sau3AI GATC 1 cut(s) 772
Sau96I GGNCC 3 cut(s) 179, 201, 344
SchI GAGTC 1 cut(s) 179
SduI GDGCHC 1 cut(s) 523
SfaNI GCATC 1 cut(s) 39
SfcI CTRYAG 2 cut(s) 615, 622
Sfr274I CTCGAG 1 cut(s) 534
SinI GGWCC 3 cut(s) 179, 201, 344
SlaI CTCGAG 1 cut(s) 534
SmiMI CAYNNNNRTG 1 cut(s) 35
SmlI CTYRAG 4 cut(s) 56, 482, 500, 534
SmoI CTYRAG 4 cut(s) 56, 482, 500, 534
Sse9I AATT 5 cut(s) 433, 494, 634, 640, 652
SsiI CCGC 1 cut(s) 719
SspMI CTAG 2 cut(s) 747, 842
SstI GAGCTC 1 cut(s) 523
StyI CCWWGG 1 cut(s) 36
TaaI ACNGT 2 cut(s) 619, 895
TaqI TCGA 3 cut(s) 22, 279, 535
TasI AATT 5 cut(s) 433, 494, 634, 640, 652
TauI GCSGC 1 cut(s) 721
TfiI GAWTC 3 cut(s) 541, 611, 743
Tru1I TTAA 6 cut(s) 99, 432, 473, 501, 561, 922
Tru9I TTAA 6 cut(s) 99, 432, 473, 501, 561, 922
TseI GCWGC 2 cut(s) 27, 215
TspDTI ATGAA 4 cut(s) 66, 564, 612, 773
TspGWI ACGGA 2 cut(s) 176, 887
Vha464I CTTAAG 1 cut(s) 500
VpaK11BI GGWCC 3 cut(s) 179, 201, 344
XhoI CTCGAG 1 cut(s) 534
XspI CTAG 2 cut(s) 747, 842
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.