RLG00000035718

ENTH domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0003209
Physical Location & Seq
Reverse (-)
70777898 .. 70779376
1479 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000035718

Sequence Viewer

Length: 984 bp
ATGTCTGTCTTGAGCAACCATAGTGGTACGACTACACCATTGTTTAATGAATTGAAGAAGCAAGCTTCCTTCTTTTTCAAGGAGCAGATCAAGAACGCAAGGTTGGTCCTCACAGATGTAACACCAGCTCAATTATTGACTGAGGAAGCTACAAACGGAAATCCATGGGCACCAGACACAAGGACTTTGGCTTCCATTTCAAGGGCTGCTTTTGAACTCGATGACTTTACAAGAATTGTGGAGATTTTGCACAAAAGATTCCTCAAGTTTGAGAGAAAGGACTGGAGGGTATCATACAATTCTCTGATTGTGCTTGAAAACTTGTTGACTCATGGACCAGAGAGTGTTGCAGCTGAGTTTGAGGTTGACAAAGGTGTTATTGAACAGATGGGAGGCTTTCAGCACATAGATGAGAAAGGATTCAATTGGGGTCTTGCAGTTAGAAAAAAGTCTCTGAGAATATTGAAGCTGCTACACCAAGGAAACTTTCTCAAAGAAGAGAGAGACCGAGCTCGAAAACTAACAAGAGGCATTCAAGGATTTGGAAGCTTTTGCCAGAGAACATCTTCGGCACAAGGCATTTTAAGAGAATCATCGTATGAAACATATGGAAGGTCTAATTCTGACTTCGTCAACCATGAAGGTCAAGAAAATCAGCTACCATCCCCCAGTATTGAAGATTTACCAAAGAAATTAGGAGAATCGAAGCAGAATAATGAAAGCGTAAGCACCGACTCTAGCAAGGAAGCAGGGAATTCAAGCTGTAGGGATGGTCTGGTGGCTAAGAAACCTGGAACTCAAACGAGTTTTAAAGAAAACAAGGTTCCAAACAAGGAGGTATTAGATAAATGGAACTGCGAGGAGGAGTTTAACCCACTTCTTTTGGGTGATAACAAAGATGAGTCCAGAATTGAACTTTCTACTGAAGATGATCACCCTTTCAGTGACACTAACAATCAAAGTGCATCTTCGTTGCTTGTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04144 map04144
Pfam Domains
Protein Families
ENTH

Protein Analysis

328

Amino Acids

36.86

Weight (kDa)

5.77

Isoelectric Point (pI)

37.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ENTH PF01417 41 - 163 3.7e-29 ENTH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 169
AcsI RAATTY 1 cut(s) 754
AcuI CTGAAG 1 cut(s) 945
AfaI GTAC 1 cut(s) 28
AfiI CCNNNNNNNGG 1 cut(s) 201
AjnI CCWGG 1 cut(s) 790
AjuI GAANNNNNNNTTGG 4 cut(s) 86, 118, 471, 503
AluBI AGCT 9 cut(s) 65, 128, 149, 353, 469, 512, 549, 658, 762
AluI AGCT 9 cut(s) 65, 128, 149, 353, 469, 512, 549, 658, 762
Alw21I GWGCWC 1 cut(s) 514
Alw26I GTCTC 2 cut(s) 456, 498
ApeKI GCWGC 3 cut(s) 206, 350, 469
ApoI RAATTY 1 cut(s) 754
Asp700I GAANNNNTTC 2 cut(s) 419, 565
AspS9I GGNCC 2 cut(s) 106, 335
AsuHPI GGTGA 2 cut(s) 899, 926
AvaII GGWCC 2 cut(s) 106, 335
BaeGI GKGCMC 1 cut(s) 172
BanI GGYRCC 1 cut(s) 169
BanII GRGCYC 1 cut(s) 514
Bbv12I GWGCWC 1 cut(s) 514
BbvI GCAGC 3 cut(s) 193, 362, 456
BccI CCATC 3 cut(s) 382, 670, 764
BciT130I CCWGG 1 cut(s) 792
BclI TGATCA 1 cut(s) 931
BcoDI GTCTC 2 cut(s) 456, 498
BfaI CTAG 1 cut(s) 738
BfmI CTRYAG 1 cut(s) 763
BisI GCNGC 3 cut(s) 207, 351, 470
BlsI GCNGC 3 cut(s) 208, 352, 471
Bme1390I CCNGG 1 cut(s) 792
Bme18I GGWCC 2 cut(s) 106, 335
BmgT120I GGNCC 2 cut(s) 106, 335
BmiI GGNNCC 2 cut(s) 171, 825
BmrFI CCNGG 1 cut(s) 792
BmrI ACTGGG 1 cut(s) 663
BmsI GCATC 1 cut(s) 974
BmuI ACTGGG 1 cut(s) 663
BpmI CTGGAG 1 cut(s) 304
BpuEI CTTGAG 2 cut(s) 31, 248
BsaI GGTCTC 1 cut(s) 498
BsaJI CCNNGG 2 cut(s) 164, 478
Bsc4I CCNNNNNNNGG 1 cut(s) 201
Bse1I ACTGG 2 cut(s) 287, 669
BseBI CCWGG 1 cut(s) 792
BseDI CCNNGG 2 cut(s) 164, 478
BseGI GGATG 2 cut(s) 662, 775
BseLI CCNNNNNNNGG 1 cut(s) 201
BseMII CTCAG 3 cut(s) 132, 345, 446
BseNI ACTGG 2 cut(s) 287, 669
BseRI GAGGAG 2 cut(s) 875, 878
BseSI GKGCMC 1 cut(s) 172
BseXI GCAGC 3 cut(s) 193, 362, 456
BshNI GGYRCC 1 cut(s) 169
BsiHKAI GWGCWC 1 cut(s) 514
BslI CCNNNNNNNGG 1 cut(s) 201
BsmAI GTCTC 2 cut(s) 456, 498
BsmI GAATGC 1 cut(s) 531
Bso31I GGTCTC 1 cut(s) 498
Bsp1286I GDGCHC 2 cut(s) 172, 514
Bsp143I GATC 2 cut(s) 87, 931
Bsp19I CCATGG 1 cut(s) 164
BspCNI CTCAG 3 cut(s) 133, 346, 447
BspLI GGNNCC 2 cut(s) 171, 825
BspT107I GGYRCC 1 cut(s) 169
BspTNI GGTCTC 1 cut(s) 498
BsrI ACTGG 2 cut(s) 287, 669
BssECI CCNNGG 2 cut(s) 164, 478
BssMI GATC 2 cut(s) 87, 931
BssT1I CCWWGG 2 cut(s) 164, 478
Bst2UI CCWGG 1 cut(s) 792
Bst6I CTCTTC 1 cut(s) 492
BstC8I GCNNGC 1 cut(s) 63
BstDEI CTNAG 4 cut(s) 141, 354, 455, 783
BstDSI CCRYGG 1 cut(s) 164
BstF5I GGATG 2 cut(s) 662, 775
BstKTI GATC 2 cut(s) 90, 934
BstMAI GTCTC 2 cut(s) 456, 498
BstMBI GATC 2 cut(s) 87, 931
BstNI CCWGG 1 cut(s) 792
BstSCI CCNGG 1 cut(s) 790
BstSFI CTRYAG 1 cut(s) 763
BstSLI GKGCMC 1 cut(s) 172
BstV1I GCAGC 3 cut(s) 193, 362, 456
BtgI CCRYGG 1 cut(s) 164
BtsCI GGATG 2 cut(s) 662, 775
BtsIMutI CAGTG 1 cut(s) 949
Cac8I GCNNGC 1 cut(s) 63
Cfr13I GGNCC 2 cut(s) 106, 335
Csp6I GTAC 1 cut(s) 27
CspCI CAANNNNNGTGG 6 cut(s) 4, 39, 219, 254, 864, 899
CviAII CATG 3 cut(s) 165, 332, 638
CviQI GTAC 1 cut(s) 27
DdeI CTNAG 4 cut(s) 141, 354, 455, 783
DpnI GATC 2 cut(s) 89, 933
DpnII GATC 2 cut(s) 87, 931
DraI TTTAAA 1 cut(s) 811
Eam1104I CTCTTC 1 cut(s) 492
EarI CTCTTC 1 cut(s) 492
Ecl136II GAGCTC 1 cut(s) 512
Eco130I CCWWGG 2 cut(s) 164, 478
Eco24I GRGCYC 1 cut(s) 514
Eco31I GGTCTC 1 cut(s) 498
Eco47I GGWCC 2 cut(s) 106, 335
Eco53kI GAGCTC 1 cut(s) 512
Eco57I CTGAAG 1 cut(s) 945
EcoICRI GAGCTC 1 cut(s) 512
EcoRI GAATTC 1 cut(s) 754
EcoRII CCWGG 1 cut(s) 790
EcoT14I CCWWGG 2 cut(s) 164, 478
EcoT38I GRGCYC 1 cut(s) 514
ErhI CCWWGG 2 cut(s) 164, 478
FaeI CATG 3 cut(s) 168, 335, 641
FalI AAGNNNNNCTT 4 cut(s) 193, 225, 952, 984
FatI CATG 3 cut(s) 164, 331, 637
FauNDI CATATG 1 cut(s) 607
FbaI TGATCA 1 cut(s) 931
Fnu4HI GCNGC 3 cut(s) 207, 351, 470
FokI GGATG 2 cut(s) 649, 782
FriOI GRGCYC 1 cut(s) 514
Fsp4HI GCNGC 3 cut(s) 207, 351, 470
FspBI CTAG 1 cut(s) 738
GluI GCNGC 3 cut(s) 207, 351, 470
GsuI CTGGAG 1 cut(s) 304
Hin1II CATG 3 cut(s) 168, 335, 641
HincII GTYRAC 3 cut(s) 327, 367, 634
HindII GTYRAC 3 cut(s) 327, 367, 634
HindIII AAGCTT 2 cut(s) 63, 547
HinfI GANTC 7 cut(s) 258, 328, 420, 590, 701, 734, 902
HphI GGTGA 2 cut(s) 899, 926
Hpy166II GTNNAC 3 cut(s) 327, 367, 634
Hpy188I TCNGA 3 cut(s) 306, 456, 625
Hpy188III TCNNGA 4 cut(s) 10, 91, 647, 906
Hpy8I GTNNAC 3 cut(s) 327, 367, 634
HpyAV CCTTC 3 cut(s) 79, 606, 635
HpyCH4V TGCA 4 cut(s) 250, 350, 437, 965
HpyF3I CTNAG 4 cut(s) 141, 354, 455, 783
Hsp92II CATG 3 cut(s) 168, 335, 641
Ksp22I TGATCA 1 cut(s) 931
Kzo9I GATC 2 cut(s) 87, 931
LmnI GCTCC 1 cut(s) 82
Lsp1109I GCAGC 3 cut(s) 193, 362, 456
LweI GCATC 1 cut(s) 974
MaeI CTAG 1 cut(s) 738
MaeIII GTNAC 2 cut(s) 118, 944
MalI GATC 2 cut(s) 89, 933
MboI GATC 2 cut(s) 87, 931
MboII GAAGA 6 cut(s) 67, 509, 558, 689, 938, 960
MfeI CAATTG 1 cut(s) 424
MhlI GDGCHC 2 cut(s) 172, 514
MluCI AATT 9 cut(s) 50, 131, 234, 298, 424, 619, 692, 754, 909
MlyI GAGTC 3 cut(s) 322, 728, 911
MroXI GAANNNNTTC 2 cut(s) 419, 565
MseI TTAA 4 cut(s) 45, 584, 810, 870
MslI CAYNNNNRTG 1 cut(s) 408
MspA1I CMGCKG 1 cut(s) 353
MspR9I CCNGG 1 cut(s) 792
MunI CAATTG 1 cut(s) 424
Mva1269I GAATGC 1 cut(s) 531
MvaI CCWGG 1 cut(s) 792
NcoI CCATGG 1 cut(s) 164
NdeI CATATG 1 cut(s) 607
NdeII GATC 2 cut(s) 87, 931
NlaIII CATG 3 cut(s) 168, 335, 641
NlaIV GGNNCC 2 cut(s) 171, 825
NmuCI GTSAC 1 cut(s) 944
PctI GAATGC 1 cut(s) 531
PdmI GAANNNNTTC 2 cut(s) 419, 565
PfeI GAWTC 4 cut(s) 258, 420, 590, 701
PflFI GACNNNGTC 1 cut(s) 629
PkrI GCNGC 3 cut(s) 208, 352, 471
PleI GAGTC 3 cut(s) 322, 728, 910
PpsI GAGTC 3 cut(s) 322, 728, 910
Psp124BI GAGCTC 1 cut(s) 514
Psp6I CCWGG 1 cut(s) 790
PspGI CCWGG 1 cut(s) 790
PspN4I GGNNCC 2 cut(s) 171, 825
PspPI GGNCC 2 cut(s) 106, 335
PsyI GACNNNGTC 1 cut(s) 629
PvuII CAGCTG 1 cut(s) 353
RsaI GTAC 1 cut(s) 28
RsaNI GTAC 1 cut(s) 27
RseI CAYNNNNRTG 1 cut(s) 408
SacI GAGCTC 1 cut(s) 514
SaqAI TTAA 4 cut(s) 45, 584, 810, 870
SatI GCNGC 3 cut(s) 207, 351, 470
Sau3AI GATC 2 cut(s) 87, 931
Sau96I GGNCC 2 cut(s) 106, 335
SchI GAGTC 3 cut(s) 322, 728, 911
ScrFI CCNGG 1 cut(s) 792
SduI GDGCHC 2 cut(s) 172, 514
SfaNI GCATC 1 cut(s) 974
SfcI CTRYAG 1 cut(s) 763
SinI GGWCC 2 cut(s) 106, 335
SmiMI CAYNNNNRTG 1 cut(s) 408
SmlI CTYRAG 2 cut(s) 10, 263
SmoI CTYRAG 2 cut(s) 10, 263
Sse9I AATT 9 cut(s) 50, 131, 234, 298, 424, 619, 692, 754, 909
SspI AATATT 1 cut(s) 462
SspMI CTAG 1 cut(s) 738
SstI GAGCTC 1 cut(s) 514
StyD4I CCNGG 1 cut(s) 790
StyI CCWWGG 2 cut(s) 164, 478
TaqI TCGA 3 cut(s) 219, 514, 704
TaqII GACCGA 1 cut(s) 522
TasI AATT 9 cut(s) 50, 131, 234, 298, 424, 619, 692, 754, 909
TfiI GAWTC 4 cut(s) 258, 420, 590, 701
Tru1I TTAA 4 cut(s) 45, 584, 810, 870
Tru9I TTAA 4 cut(s) 45, 584, 810, 870
TscAI CASTG 1 cut(s) 949
TseFI GTSAC 1 cut(s) 944
TseI GCWGC 3 cut(s) 206, 350, 469
Tsp45I GTSAC 1 cut(s) 944
TspDTI ATGAA 4 cut(s) 63, 615, 654, 732
TspGWI ACGGA 1 cut(s) 171
TspRI CASTG 1 cut(s) 949
Tth111I GACNNNGTC 1 cut(s) 629
VpaK11BI GGWCC 2 cut(s) 106, 335
XapI RAATTY 1 cut(s) 754
XmnI GAANNNNTTC 2 cut(s) 419, 565
XspI CTAG 1 cut(s) 738
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.