MD11G1110100.v1.1

ENTH domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0003209
Physical Location & Seq
Forward (+)
9728932 .. 9730789
1858 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1110100.v1.1.491

Sequence Viewer

Length: 981 bp
ATGTCAATATTAAGCAACAATATCAGCAGCAGCAACAATGGCGCACCTTCATTTCATGAGTTCAAGAAACAAGCTTCTTTCTTCTTCAAGGAGAAGATCAAGACTGCAAGACTAGTCCTCACAGATGTTACACCAGCGCAACTATTGACTGAAGAAGCTACAAATGGGAATCCATTGTCTCCAGACACAAGGACCTTGGGTTCAATTTCAAAGGCTGCTTTCGAACTCGAAGATTACACAAGAATTGTGGAGATTTTACACAAAAGATTAGTGAAGTTTGAAAAAAAGAACTGGAGGGTCTCCTACAATTCTCTGATTGTTGTTGAGCATTTGCTGACTCATGGACCAGAAAGCGTTGCAGTTGAGTTTGAGGTTGACAAAGATGTTATTCAACAGATGGGAAGCTTTCAGCATATAGATGAGAAAGGATTCAATTGGGGTCTTGCTCTTAGAAAGAAGTCCGGGAGAATTTTGAAGCTGCTTGAGAAGGGACCTCTTCTCAAAGAGGAGAGAGACAAAGCTAGGAAGCTATCCAGAGGGATTCACGGGTTTGGGAGCTTCTGCCAAAGATCATCTGGCTCTTCAGCACAAGGGATTTTAAGAGAATCATCATTTCAAACATATGGAAGGTCTAATTCTCAAACTCTCTTCAGCGACGACGGAAACCAGGAGAATCAGTTTCCATCATCTGACATCAAAGATTTTACTAAGAAAGTTGATGAATCAAAGCGAAGCAATGAAAGCATTGTGATCGTTGTGGCTGTCAACGATGAAGTAGAGAAACCCGAAGCTCGAACAAGTTTTAAAGAAAACATGGTTCCAAACAAGAACGATTTGGAAAGATGCTGCTGCAAGGGAGAGTCTAACCCACTTTTGGATGGTGAGATAGATGTGTCTAGGGTTGAAATTTCTGCTGGGGATGCACATCCCTTCAATGAAACGCACAATCTAAGTGCTGCTTCATTGCTTGCTGCAACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04144 map04144
Pfam Domains
Protein Families
ENTH

Protein Analysis

327

Amino Acids

36.37

Weight (kDa)

6.48

Isoelectric Point (pI)

32.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ENTH PF01417 44 - 164 1.6e-29 ENTH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 468, 906
AcuI CTGAAG 3 cut(s) 171, 567, 634
AfiI CCNNNNNNNGG 1 cut(s) 874
AhlI ACTAGT 1 cut(s) 112
AjnI CCWGG 1 cut(s) 666
AloI GAACNNNNNNTCC 2 cut(s) 184, 216
AluBI AGCT 8 cut(s) 74, 158, 405, 478, 521, 529, 558, 791
AluI AGCT 8 cut(s) 74, 158, 405, 478, 521, 529, 558, 791
Alw26I GTCTC 3 cut(s) 183, 304, 507
ApeKI GCWGC 8 cut(s) 27, 30, 215, 478, 846, 849, 956, 971
ApoI RAATTY 2 cut(s) 468, 906
Asp700I GAANNNNTTC 1 cut(s) 428
AspLEI GCGC 2 cut(s) 44, 139
AspS9I GGNCC 3 cut(s) 192, 344, 491
AsuC2I CCSGG 1 cut(s) 463
AsuHPI GGTGA 1 cut(s) 893
AsuII TTCGAA 1 cut(s) 222
AvaII GGWCC 3 cut(s) 192, 344, 491
BbvI GCAGC 8 cut(s) 39, 42, 202, 465, 833, 836, 943, 958
BccI CCATC 3 cut(s) 391, 691, 872
BcgI CGANNNNNNTGC 2 cut(s) 733, 767
BciT130I CCWGG 1 cut(s) 668
BcnI CCSGG 1 cut(s) 463
BcoDI GTCTC 3 cut(s) 183, 304, 507
BcuI ACTAGT 1 cut(s) 112
BfaI CTAG 3 cut(s) 113, 522, 897
BisI GCNGC 8 cut(s) 28, 31, 216, 479, 847, 850, 957, 972
BlsI GCNGC 8 cut(s) 29, 32, 217, 480, 848, 851, 958, 973
Bme1390I CCNGG 2 cut(s) 463, 668
Bme18I GGWCC 3 cut(s) 192, 344, 491
BmgT120I GGNCC 3 cut(s) 192, 344, 491
BmiI GGNNCC 2 cut(s) 492, 819
BmrFI CCNGG 2 cut(s) 463, 668
BmsI GCATC 2 cut(s) 833, 910
BpmI CTGGAG 2 cut(s) 165, 313
Bpu14I TTCGAA 1 cut(s) 222
BpuEI CTTGAG 1 cut(s) 503
BpuMI CCSGG 1 cut(s) 463
BsaBI GATNNNNATC 1 cut(s) 924
BsaI GGTCTC 1 cut(s) 304
BsaJI CCNNGG 1 cut(s) 195
BsaXI ACNNNNNCTCC 2 cut(s) 662, 692
Bsc4I CCNNNNNNNGG 1 cut(s) 874
Bse1I ACTGG 1 cut(s) 296
Bse3DI GCAATG 2 cut(s) 742, 962
Bse8I GATNNNNATC 1 cut(s) 924
BseBI CCWGG 1 cut(s) 668
BseDI CCNNGG 1 cut(s) 195
BseGI GGATG 3 cut(s) 883, 925, 925
BseJI GATNNNNATC 1 cut(s) 924
BseLI CCNNNNNNNGG 1 cut(s) 874
BseMI GCAATG 2 cut(s) 742, 962
BseNI ACTGG 1 cut(s) 296
BseRI GAGGAG 1 cut(s) 521
BseXI GCAGC 8 cut(s) 39, 42, 202, 465, 833, 836, 943, 958
BseYI CCCAGC 1 cut(s) 914
BsiSI CCGG 1 cut(s) 462
BslFI GGGAC 1 cut(s) 504
BslI CCNNNNNNNGG 1 cut(s) 874
BsmAI GTCTC 3 cut(s) 183, 304, 507
BsmFI GGGAC 1 cut(s) 504
Bso31I GGTCTC 1 cut(s) 304
Bsp119I TTCGAA 1 cut(s) 222
Bsp143I GATC 3 cut(s) 96, 569, 750
BspHI TCATGA 1 cut(s) 55
BspLI GGNNCC 2 cut(s) 492, 819
BspQI GCTCTTC 1 cut(s) 586
BspT104I TTCGAA 1 cut(s) 222
BspTNI GGTCTC 1 cut(s) 304
BsrDI GCAATG 2 cut(s) 742, 962
BsrI ACTGG 1 cut(s) 296
BssECI CCNNGG 1 cut(s) 195
BssMI GATC 3 cut(s) 96, 569, 750
BssT1I CCWWGG 1 cut(s) 195
Bst2UI CCWGG 1 cut(s) 668
Bst6I CTCTTC 3 cut(s) 501, 586, 653
BstBI TTCGAA 1 cut(s) 222
BstC8I GCNNGC 1 cut(s) 969
BstDEI CTNAG 3 cut(s) 449, 708, 950
BstF5I GGATG 3 cut(s) 883, 925, 925
BstHHI GCGC 2 cut(s) 44, 139
BstKTI GATC 3 cut(s) 99, 572, 753
BstMAI GTCTC 3 cut(s) 183, 304, 507
BstMBI GATC 3 cut(s) 96, 569, 750
BstMWI GCNNNNNNNGC 3 cut(s) 39, 741, 920
BstNI CCWGG 1 cut(s) 668
BstSCI CCNGG 2 cut(s) 461, 666
BstV1I GCAGC 8 cut(s) 39, 42, 202, 465, 833, 836, 943, 958
BtsCI GGATG 3 cut(s) 883, 925, 925
Cac8I GCNNGC 1 cut(s) 969
CciI TCATGA 1 cut(s) 55
CfoI GCGC 2 cut(s) 44, 139
Cfr13I GGNCC 3 cut(s) 192, 344, 491
CspCI CAANNNNNGTGG 2 cut(s) 228, 263
CviAII CATG 3 cut(s) 56, 341, 814
DdeI CTNAG 3 cut(s) 449, 708, 950
DpnI GATC 3 cut(s) 98, 571, 752
DpnII GATC 3 cut(s) 96, 569, 750
DraI TTTAAA 1 cut(s) 805
Eam1104I CTCTTC 3 cut(s) 501, 586, 653
EarI CTCTTC 3 cut(s) 501, 586, 653
Eco130I CCWWGG 1 cut(s) 195
Eco31I GGTCTC 1 cut(s) 304
Eco47I GGWCC 3 cut(s) 192, 344, 491
Eco57I CTGAAG 3 cut(s) 171, 567, 634
EcoO109I RGGNCCY 2 cut(s) 192, 491
EcoRII CCWGG 1 cut(s) 666
EcoT14I CCWWGG 1 cut(s) 195
ErhI CCWWGG 1 cut(s) 195
FaeI CATG 3 cut(s) 59, 344, 817
FaiI YATR 7 cut(s) 57, 342, 414, 416, 622, 624, 815
FalI AAGNNNNNCTT 2 cut(s) 943, 975
FaqI GGGAC 1 cut(s) 504
FatI CATG 3 cut(s) 55, 340, 813
FauNDI CATATG 1 cut(s) 622
Fnu4HI GCNGC 8 cut(s) 28, 31, 216, 479, 847, 850, 957, 972
FokI GGATG 3 cut(s) 890, 912, 932
Fsp4HI GCNGC 8 cut(s) 28, 31, 216, 479, 847, 850, 957, 972
FspBI CTAG 3 cut(s) 113, 522, 897
GlaI GCGC 2 cut(s) 43, 138
GluI GCNGC 8 cut(s) 28, 31, 216, 479, 847, 850, 957, 972
GsaI CCCAGC 1 cut(s) 918
GsuI CTGGAG 2 cut(s) 165, 313
HapII CCGG 1 cut(s) 462
HhaI GCGC 2 cut(s) 44, 139
Hin1II CATG 3 cut(s) 59, 344, 817
Hin6I GCGC 2 cut(s) 42, 137
HinP1I GCGC 2 cut(s) 42, 137
HincII GTYRAC 2 cut(s) 376, 766
HindII GTYRAC 2 cut(s) 376, 766
HindIII AAGCTT 2 cut(s) 72, 403
HinfI GANTC 8 cut(s) 169, 337, 429, 541, 605, 673, 722, 860
HpaII CCGG 1 cut(s) 462
HphI GGTGA 1 cut(s) 893
Hpy166II GTNNAC 2 cut(s) 376, 766
Hpy188I TCNGA 2 cut(s) 315, 691
Hpy188III TCNNGA 5 cut(s) 56, 64, 100, 182, 534
Hpy8I GTNNAC 2 cut(s) 376, 766
Hpy99I CGWCG 2 cut(s) 659, 662
HpyAV CCTTC 4 cut(s) 57, 481, 621, 940
HpyCH4V TGCA 5 cut(s) 107, 359, 852, 923, 974
HpyF10VI GCNNNNNNNGC 3 cut(s) 39, 741, 920
HpyF3I CTNAG 3 cut(s) 449, 708, 950
Hsp92II CATG 3 cut(s) 59, 344, 817
HspAI GCGC 2 cut(s) 42, 137
Kzo9I GATC 3 cut(s) 96, 569, 750
LguI GCTCTTC 1 cut(s) 586
LmnI GCTCC 1 cut(s) 555
Lsp1109I GCAGC 8 cut(s) 39, 42, 202, 465, 833, 836, 943, 958
LweI GCATC 2 cut(s) 833, 910
MaeI CTAG 3 cut(s) 113, 522, 897
MaeIII GTNAC 1 cut(s) 127
MalI GATC 3 cut(s) 98, 571, 752
MboI GATC 3 cut(s) 96, 569, 750
MboII GAAGA 8 cut(s) 73, 76, 106, 164, 242, 488, 573, 640
MfeI CAATTG 1 cut(s) 433
MluCI AATT 7 cut(s) 204, 243, 307, 433, 468, 634, 906
MlyI GAGTC 2 cut(s) 331, 869
MnlI CCTC 6 cut(s) 128, 288, 364, 499, 504, 530
MroXI GAANNNNTTC 1 cut(s) 428
MseI TTAA 4 cut(s) 11, 599, 804, 979
MslI CAYNNNNRTG 1 cut(s) 417
MspI CCGG 1 cut(s) 462
MspR9I CCNGG 2 cut(s) 463, 668
MunI CAATTG 1 cut(s) 433
MvaI CCWGG 1 cut(s) 668
MwoI GCNNNNNNNGC 3 cut(s) 39, 741, 920
NciI CCSGG 1 cut(s) 463
NdeI CATATG 1 cut(s) 622
NdeII GATC 3 cut(s) 96, 569, 750
NlaIII CATG 3 cut(s) 59, 344, 817
NlaIV GGNNCC 2 cut(s) 492, 819
NspV TTCGAA 1 cut(s) 222
PagI TCATGA 1 cut(s) 55
PciSI GCTCTTC 1 cut(s) 586
PdmI GAANNNNTTC 1 cut(s) 428
PfeI GAWTC 6 cut(s) 169, 429, 541, 605, 673, 722
PfoI TCCNGGA 1 cut(s) 461
PkrI GCNGC 8 cut(s) 29, 32, 217, 480, 848, 851, 958, 973
PleI GAGTC 2 cut(s) 331, 868
PpsI GAGTC 2 cut(s) 331, 868
PpuMI RGGWCCY 2 cut(s) 192, 491
Psp5II RGGWCCY 2 cut(s) 192, 491
Psp6I CCWGG 1 cut(s) 666
PspFI CCCAGC 1 cut(s) 914
PspGI CCWGG 1 cut(s) 666
PspN4I GGNNCC 2 cut(s) 492, 819
PspPI GGNCC 3 cut(s) 192, 344, 491
PspPPI RGGWCCY 2 cut(s) 192, 491
RseI CAYNNNNRTG 1 cut(s) 417
SapI GCTCTTC 1 cut(s) 586
SaqAI TTAA 4 cut(s) 11, 599, 804, 979
SatI GCNGC 8 cut(s) 28, 31, 216, 479, 847, 850, 957, 972
Sau3AI GATC 3 cut(s) 96, 569, 750
Sau96I GGNCC 3 cut(s) 192, 344, 491
SchI GAGTC 2 cut(s) 331, 869
ScrFI CCNGG 2 cut(s) 463, 668
SfaNI GCATC 2 cut(s) 833, 910
SfuI TTCGAA 1 cut(s) 222
SinI GGWCC 3 cut(s) 192, 344, 491
SmiMI CAYNNNNRTG 1 cut(s) 417
SmlI CTYRAG 1 cut(s) 482
SmoI CTYRAG 1 cut(s) 482
SpeI ACTAGT 1 cut(s) 112
Sse9I AATT 7 cut(s) 204, 243, 307, 433, 468, 634, 906
SspI AATATT 1 cut(s) 9
SspMI CTAG 3 cut(s) 113, 522, 897
StyD4I CCNGG 2 cut(s) 461, 666
StyI CCWWGG 1 cut(s) 195
TaqI TCGA 3 cut(s) 222, 228, 793
TasI AATT 7 cut(s) 204, 243, 307, 433, 468, 634, 906
TfiI GAWTC 6 cut(s) 169, 429, 541, 605, 673, 722
Tru1I TTAA 4 cut(s) 11, 599, 804, 979
Tru9I TTAA 4 cut(s) 11, 599, 804, 979
TseI GCWGC 8 cut(s) 27, 30, 215, 478, 846, 849, 956, 971
TspDTI ATGAA 7 cut(s) 39, 44, 735, 753, 786, 951, 951
TspGWI ACGGA 1 cut(s) 675
VpaK11BI GGWCC 3 cut(s) 192, 344, 491
XapI RAATTY 2 cut(s) 468, 906
XcmI CCANNNNNNNNNTGG 1 cut(s) 572
XmnI GAANNNNTTC 1 cut(s) 428
XspI CTAG 3 cut(s) 113, 522, 897
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.