pycom11g09090

ENTH domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0003209
Physical Location & Seq
Forward (+)
7249444 .. 7251084
1641 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g09090.3

Sequence Viewer

Length: 981 bp
ATGTCAATCTTAAGCAACAATATCAGCAGCAGCAACAATGGGGCACCTTCATTTCATGAGTTCAAGAAACAAGCTTCTTTCTTCTTCAAGGAGAAGATCAAGACTGCAAGACTAGTCCTCACAGATGTTACACCAGCGCAACTATTGACTGAAGAAGCTACAAATGGGAATCCATTGTCTCCAGACACAAGGACTTTGGGTTCAATTTCAAAGGCTGCTTTTGAACTCGAAGATTACACAAGAATTGTGGAGATTTTGCACAAAAGATTAGTGAAGTTTGAAAGGAAGAACTGGAGGGTCTCTTACAATTCTCTGATTGTTGTTGAGCATTTGCTGACTCATGGACCAGAAAGCGTTGCAGTTGAGTTTGAGGTTGACAAAGATGTTATTCAACAGATGGGAAGCTTTCAGCATATAGATGAGAAAGGATTCAATTGGGGTCTTGCTCTTAGAAAGAAGTCCGGGAGAATTTTGAAGCTGCTAGAGAAAGGACCTCTTCTCAAAGAGGAGAGAGACAAAGCTAGGAAGCTAACCAGAGGGATTCAAGGGTTTGGGAGTTTCTGCCAAATATCATCTGGCTCTTCAGCACAAGGGATTTTAAGAGAATCATCATTTCAAACATATGGAAGGTCTAAGTCTCAATCTCTCTTCAGTGACGACGAAAACCAGGAGAATCAGTTTCCATCATCTGACGTCAAAAATTTTACTAAGAAAGTTGAAGAATCAAAGCGAAGCAACGAAAGCATTGCGATCGTTGTGGCTGTCAACGATGAAGTAGAGAAACCCGAAGCTCGAACAAGTTTTAAAGAAAACATGGTTCCAAACAAGGACGATTTGGAGAGATGCTGCTGCAAGGGAGAGTCTAACCCACTTTTGGATGGTGAGAAAGATGTGTCTAGGGTTGAAATTTCTGCTGAGGATGCACATCCCTTCAATGAAACGCACAATCTAAGTGCTGCTTCATTGCTTGCTGCAACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04144 map04144
Pfam Domains
Protein Families
ENTH

Protein Analysis

327

Amino Acids

36.49

Weight (kDa)

6.23

Isoelectric Point (pI)

33.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 696
AccB1I GGYRCC 1 cut(s) 43
AcsI RAATTY 3 cut(s) 468, 700, 906
AcuI CTGAAG 3 cut(s) 171, 567, 634
AcyI GRCGYC 1 cut(s) 693
AfiI CCNNNNNNNGG 1 cut(s) 874
AflII CTTAAG 1 cut(s) 10
AhlI ACTAGT 1 cut(s) 112
AjnI CCWGG 1 cut(s) 666
AloI GAACNNNNNNTCC 2 cut(s) 184, 216
AluBI AGCT 7 cut(s) 74, 158, 405, 478, 521, 529, 791
AluI AGCT 7 cut(s) 74, 158, 405, 478, 521, 529, 791
Alw26I GTCTC 4 cut(s) 183, 304, 507, 642
ApeKI GCWGC 8 cut(s) 27, 30, 215, 478, 846, 849, 956, 971
ApoI RAATTY 3 cut(s) 468, 700, 906
Asp700I GAANNNNTTC 1 cut(s) 428
AspLEI GCGC 1 cut(s) 139
AspS9I GGNCC 2 cut(s) 344, 491
AsuC2I CCSGG 1 cut(s) 463
AsuHPI GGTGA 1 cut(s) 893
AvaII GGWCC 2 cut(s) 344, 491
BaeGI GKGCMC 1 cut(s) 46
BanI GGYRCC 1 cut(s) 43
BbvCI CCTCAGC 1 cut(s) 915
BbvI GCAGC 8 cut(s) 39, 42, 202, 465, 833, 836, 943, 958
BccI CCATC 3 cut(s) 391, 691, 872
BcgI CGANNNNNNTGC 4 cut(s) 728, 733, 762, 767
BciT130I CCWGG 1 cut(s) 668
BcnI CCSGG 1 cut(s) 463
BcoDI GTCTC 4 cut(s) 183, 304, 507, 642
BcuI ACTAGT 1 cut(s) 112
BfaI CTAG 4 cut(s) 113, 482, 522, 897
BfrI CTTAAG 1 cut(s) 10
BisI GCNGC 8 cut(s) 28, 31, 216, 479, 847, 850, 957, 972
BlsI GCNGC 8 cut(s) 29, 32, 217, 480, 848, 851, 958, 973
Bme1390I CCNGG 2 cut(s) 463, 668
Bme18I GGWCC 2 cut(s) 344, 491
BmgT120I GGNCC 2 cut(s) 344, 491
BmiI GGNNCC 2 cut(s) 45, 819
BmrFI CCNGG 2 cut(s) 463, 668
BmsI GCATC 2 cut(s) 833, 910
BpmI CTGGAG 2 cut(s) 165, 313
Bpu10I CCTNAGC 1 cut(s) 915
BpuMI CCSGG 1 cut(s) 463
BsaBI GATNNNNATC 1 cut(s) 924
BsaHI GRCGYC 1 cut(s) 693
BsaI GGTCTC 1 cut(s) 304
BsaXI ACNNNNNCTCC 2 cut(s) 662, 692
Bsc4I CCNNNNNNNGG 1 cut(s) 874
Bse1I ACTGG 1 cut(s) 296
Bse3DI GCAATG 2 cut(s) 744, 962
Bse8I GATNNNNATC 1 cut(s) 924
BseBI CCWGG 1 cut(s) 668
BseGI GGATG 3 cut(s) 883, 925, 925
BseJI GATNNNNATC 1 cut(s) 924
BseLI CCNNNNNNNGG 1 cut(s) 874
BseMI GCAATG 2 cut(s) 744, 962
BseMII CTCAG 1 cut(s) 906
BseNI ACTGG 1 cut(s) 296
BseRI GAGGAG 1 cut(s) 521
BseSI GKGCMC 1 cut(s) 46
BseXI GCAGC 8 cut(s) 39, 42, 202, 465, 833, 836, 943, 958
Bsh1285I CGRYCG 1 cut(s) 753
BshNI GGYRCC 1 cut(s) 43
BsiEI CGRYCG 1 cut(s) 753
BsiSI CCGG 1 cut(s) 462
BslI CCNNNNNNNGG 1 cut(s) 874
BsmAI GTCTC 4 cut(s) 183, 304, 507, 642
Bso31I GGTCTC 1 cut(s) 304
Bsp1286I GDGCHC 1 cut(s) 46
Bsp143I GATC 2 cut(s) 96, 750
BspCNI CTCAG 1 cut(s) 907
BspHI TCATGA 1 cut(s) 55
BspLI GGNNCC 2 cut(s) 45, 819
BspQI GCTCTTC 1 cut(s) 586
BspT107I GGYRCC 1 cut(s) 43
BspTI CTTAAG 1 cut(s) 10
BspTNI GGTCTC 1 cut(s) 304
BsrDI GCAATG 2 cut(s) 744, 962
BsrI ACTGG 1 cut(s) 296
BssMI GATC 2 cut(s) 96, 750
BssNI GRCGYC 1 cut(s) 693
Bst2UI CCWGG 1 cut(s) 668
Bst6I CTCTTC 3 cut(s) 501, 586, 653
BstACI GRCGYC 1 cut(s) 693
BstAFI CTTAAG 1 cut(s) 10
BstC8I GCNNGC 1 cut(s) 969
BstDEI CTNAG 5 cut(s) 449, 633, 708, 915, 950
BstF5I GGATG 3 cut(s) 883, 925, 925
BstHHI GCGC 1 cut(s) 139
BstKTI GATC 2 cut(s) 99, 753
BstMAI GTCTC 4 cut(s) 183, 304, 507, 642
BstMBI GATC 2 cut(s) 96, 750
BstMCI CGRYCG 1 cut(s) 753
BstMWI GCNNNNNNNGC 2 cut(s) 741, 920
BstNI CCWGG 1 cut(s) 668
BstSCI CCNGG 2 cut(s) 461, 666
BstSLI GKGCMC 1 cut(s) 46
BstV1I GCAGC 8 cut(s) 39, 42, 202, 465, 833, 836, 943, 958
BtsCI GGATG 3 cut(s) 883, 925, 925
BtsIMutI CAGTG 1 cut(s) 658
Cac8I GCNNGC 1 cut(s) 969
CciI TCATGA 1 cut(s) 55
CfoI GCGC 1 cut(s) 139
Cfr13I GGNCC 2 cut(s) 344, 491
CspCI CAANNNNNGTGG 2 cut(s) 228, 263
CviAII CATG 3 cut(s) 56, 341, 814
DdeI CTNAG 5 cut(s) 449, 633, 708, 915, 950
DpnI GATC 2 cut(s) 98, 752
DpnII GATC 2 cut(s) 96, 750
DraI TTTAAA 1 cut(s) 805
Eam1104I CTCTTC 3 cut(s) 501, 586, 653
EarI CTCTTC 3 cut(s) 501, 586, 653
Eco31I GGTCTC 1 cut(s) 304
Eco47I GGWCC 2 cut(s) 344, 491
Eco57I CTGAAG 3 cut(s) 171, 567, 634
EcoO109I RGGNCCY 1 cut(s) 491
EcoRII CCWGG 1 cut(s) 666
FaeI CATG 3 cut(s) 59, 344, 817
FaiI YATR 7 cut(s) 57, 342, 414, 416, 622, 624, 815
FalI AAGNNNNNCTT 4 cut(s) 480, 512, 943, 975
FatI CATG 3 cut(s) 55, 340, 813
FauNDI CATATG 1 cut(s) 622
Fnu4HI GCNGC 8 cut(s) 28, 31, 216, 479, 847, 850, 957, 972
FokI GGATG 3 cut(s) 890, 912, 932
Fsp4HI GCNGC 8 cut(s) 28, 31, 216, 479, 847, 850, 957, 972
FspBI CTAG 4 cut(s) 113, 482, 522, 897
GlaI GCGC 1 cut(s) 138
GluI GCNGC 8 cut(s) 28, 31, 216, 479, 847, 850, 957, 972
GsuI CTGGAG 2 cut(s) 165, 313
HapII CCGG 1 cut(s) 462
HhaI GCGC 1 cut(s) 139
Hin1I GRCGYC 1 cut(s) 693
Hin1II CATG 3 cut(s) 59, 344, 817
Hin6I GCGC 1 cut(s) 137
HinP1I GCGC 1 cut(s) 137
HincII GTYRAC 2 cut(s) 376, 766
HindII GTYRAC 2 cut(s) 376, 766
HindIII AAGCTT 2 cut(s) 72, 403
HinfI GANTC 8 cut(s) 169, 337, 429, 541, 605, 673, 722, 860
HpaII CCGG 1 cut(s) 462
HphI GGTGA 1 cut(s) 893
Hpy166II GTNNAC 2 cut(s) 376, 766
Hpy188I TCNGA 2 cut(s) 315, 691
Hpy188III TCNNGA 4 cut(s) 56, 64, 100, 182
Hpy8I GTNNAC 2 cut(s) 376, 766
Hpy99I CGWCG 1 cut(s) 662
HpyAV CCTTC 3 cut(s) 57, 621, 940
HpyCH4IV ACGT 1 cut(s) 693
HpyCH4V TGCA 6 cut(s) 107, 259, 359, 852, 923, 974
HpyF10VI GCNNNNNNNGC 2 cut(s) 741, 920
HpyF3I CTNAG 5 cut(s) 449, 633, 708, 915, 950
HpySE526I ACGT 1 cut(s) 693
Hsp92I GRCGYC 1 cut(s) 693
Hsp92II CATG 3 cut(s) 59, 344, 817
HspAI GCGC 1 cut(s) 137
Kzo9I GATC 2 cut(s) 96, 750
LguI GCTCTTC 1 cut(s) 586
LpnPI CCDG 9 cut(s) 147, 195, 277, 360, 475, 547, 561, 653, 680
Lsp1109I GCAGC 8 cut(s) 39, 42, 202, 465, 833, 836, 943, 958
LweI GCATC 2 cut(s) 833, 910
MaeI CTAG 4 cut(s) 113, 482, 522, 897
MaeII ACGT 1 cut(s) 693
MaeIII GTNAC 2 cut(s) 127, 653
MalI GATC 2 cut(s) 98, 752
MboI GATC 2 cut(s) 96, 750
MfeI CAATTG 1 cut(s) 433
MhlI GDGCHC 1 cut(s) 46
MluCI AATT 7 cut(s) 204, 243, 307, 433, 468, 700, 906
MlyI GAGTC 2 cut(s) 331, 869
MnlI CCTC 7 cut(s) 128, 288, 364, 499, 504, 530, 910
MroXI GAANNNNTTC 1 cut(s) 428
MseI TTAA 4 cut(s) 11, 599, 804, 979
MslI CAYNNNNRTG 1 cut(s) 417
MspCI CTTAAG 1 cut(s) 10
MspI CCGG 1 cut(s) 462
MspR9I CCNGG 2 cut(s) 463, 668
MunI CAATTG 1 cut(s) 433
MvaI CCWGG 1 cut(s) 668
MwoI GCNNNNNNNGC 2 cut(s) 741, 920
NciI CCSGG 1 cut(s) 463
NdeI CATATG 1 cut(s) 622
NdeII GATC 2 cut(s) 96, 750
NlaIII CATG 3 cut(s) 59, 344, 817
NlaIV GGNNCC 2 cut(s) 45, 819
NmuCI GTSAC 1 cut(s) 653
PagI TCATGA 1 cut(s) 55
PciSI GCTCTTC 1 cut(s) 586
PdmI GAANNNNTTC 1 cut(s) 428
PfeI GAWTC 6 cut(s) 169, 429, 541, 605, 673, 722
PfoI TCCNGGA 1 cut(s) 461
PkrI GCNGC 8 cut(s) 29, 32, 217, 480, 848, 851, 958, 973
Ple19I CGATCG 1 cut(s) 753
PleI GAGTC 2 cut(s) 331, 868
PpsI GAGTC 2 cut(s) 331, 868
PpuMI RGGWCCY 1 cut(s) 491
Psp5II RGGWCCY 1 cut(s) 491
Psp6I CCWGG 1 cut(s) 666
PspGI CCWGG 1 cut(s) 666
PspN4I GGNNCC 2 cut(s) 45, 819
PspPI GGNCC 2 cut(s) 344, 491
PspPPI RGGWCCY 1 cut(s) 491
PvuI CGATCG 1 cut(s) 753
RseI CAYNNNNRTG 1 cut(s) 417
SapI GCTCTTC 1 cut(s) 586
SaqAI TTAA 4 cut(s) 11, 599, 804, 979
SatI GCNGC 8 cut(s) 28, 31, 216, 479, 847, 850, 957, 972
Sau3AI GATC 2 cut(s) 96, 750
Sau96I GGNCC 2 cut(s) 344, 491
SchI GAGTC 2 cut(s) 331, 869
ScrFI CCNGG 2 cut(s) 463, 668
SduI GDGCHC 1 cut(s) 46
SfaNI GCATC 2 cut(s) 833, 910
SinI GGWCC 2 cut(s) 344, 491
SmiMI CAYNNNNRTG 1 cut(s) 417
SmlI CTYRAG 1 cut(s) 10
SmoI CTYRAG 1 cut(s) 10
SpeI ACTAGT 1 cut(s) 112
Sse9I AATT 7 cut(s) 204, 243, 307, 433, 468, 700, 906
SspMI CTAG 4 cut(s) 113, 482, 522, 897
StyD4I CCNGG 2 cut(s) 461, 666
TaiI ACGT 1 cut(s) 696
TaqI TCGA 2 cut(s) 228, 793
TasI AATT 7 cut(s) 204, 243, 307, 433, 468, 700, 906
TfiI GAWTC 6 cut(s) 169, 429, 541, 605, 673, 722
Tru1I TTAA 4 cut(s) 11, 599, 804, 979
Tru9I TTAA 4 cut(s) 11, 599, 804, 979
TscAI CASTG 1 cut(s) 658
TseFI GTSAC 1 cut(s) 653
TseI GCWGC 8 cut(s) 27, 30, 215, 478, 846, 849, 956, 971
Tsp45I GTSAC 1 cut(s) 653
TspDTI ATGAA 5 cut(s) 39, 44, 786, 951, 951
TspRI CASTG 1 cut(s) 658
Vha464I CTTAAG 1 cut(s) 10
VpaK11BI GGWCC 2 cut(s) 344, 491
XapI RAATTY 3 cut(s) 468, 700, 906
XcmI CCANNNNNNNNNTGG 1 cut(s) 572
XmnI GAANNNNTTC 1 cut(s) 428
XspI CTAG 4 cut(s) 113, 482, 522, 897
ZraI GACGTC 1 cut(s) 694
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.