Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002564

Physical Location & Seq

Genomic Coordinates Forward (+)

19284339 .. 19285582

Gene Structure 1244 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G51970.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1038 bp

ATGGCGAGTTTCATCAAGGCATGGGGTTTAGTGATCATCTCACTGTGTTACACTTTTTTCATTGCCAAATTGGTTCCAAAAGGAATCAAAAGGCTCATACTATTTTTCCCTGTCTTCCTCATTTTCTTCATAGTACCTTTCTTGATATATTCCTTACATTTACTCGGCATCACGGCTTTCTTCATCGCTTGGCTAGCAAATTTCAAGCTCTTATTATTTGCATTAGGGCGCGGTCCTCTCTCTTCAAACCATAAACCCCTATCTCTCCCTATTTTCTTAGCTGTCTCTTGCTTGCCCATCAAGATTCAGCTGAGCCCAAAACCTACAAAAACTCACTCCCATGAAGGATCCACAGAGGGTCCTTTGATTTATACCATAAAGGCAGTTTTTGTGGTTCTCATCATCAAAGCCTACGAATACAGTACCAAATTGCCTGAGAAAGTCGTGCTGACTCTCTACGCGATCCACATATATTTCGCCCTTGAGATCATCCTTGCCGCCACAGCTGCTGCGGTTCGAGCCATGTCGGATCTTGAGCTCGAGCCACAGTTCAACAAGCCGTACCTAGCGACATCACTTCAAGATTTCTGGGGGAGACGATGGAACCTGATGGTCACTGGAATCTTACGGCCAACCGTGTACGAACCGTCACTTCAACTGTTCTCGGTTTTGGGCCCGAACTATTCCCAGATTCTTGCAGCTTTCGGGACGTTTGTTGTCTCTGGGATAATGCACGAGCTCATCTTCTTCTACATGGGACGGTTGAGGCCAGACTGGAAGATGATGTGGTTCTTCCTCATAAATGGATTTTGCACGACCGTGGAGATCGCCATCAAGAAAACCATTAACGGTAGGTGGAGATTCCCGAAAGCAATCAGTCAGGTTTTGACACTCACTTTTGTGATGGTGACGGCATTGTGGCTGTTCTTGCCCGAATTTAATCGGTGCAACATAGTTGAGAAGGCTCTTGATGAGTACGCAGCCATAGGCGCATTTGCAGTCGAGGTCAGGAGGAAACTGACCGCATATCTTTTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006629 GO:0006706 GO:0008150 GO:0008152 GO:0008202 GO:0009056 GO:0009987 GO:0016042 GO:0016125 GO:0016127 GO:0030258 GO:0034433 GO:0034434 GO:0044237 GO:0044238 GO:0044255 GO:0071704 GO:1901360 GO:1901361 GO:1901575 GO:1901615 GO:1901616

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MBOAT_2

Protein Analysis

345

Amino Acids

39.32

Weight (kDa)

9.68

Isoelectric Point (pI)

44.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MBOAT_2	PF13813	181 - 266	6.8e-20	Membrane bound O-acyl transferase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002564)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51970
fragaria_vesca	FvH4_3g00990 FvH4_7g01920
malus_domestica	MD02G1299400.v1.1 MD02G1299700.v1.1 MD02G1299800.v1.1 MD10G1331600.v1.1
prunus_persica	Prupe.2G024800_v2.0.a1 Prupe.2G024900_v2.0.a1 Prupe.4G010500_v2.0.a1
pyrus_communis	pycom02g25180 pycom10g28120
rosa_chinensis	RchiOBHm_Chr1g0318541 RchiOBHm_Chr1g0318551 RchiOBHm_Chr5g0001521
rosa_laevigata	RLG00000030527 RLG00000030528 RLG00000030935
rosa_multiflora	Rmu_sc0001304.1_g000049 Rmu_sc0001304.1_g000050 Rmu_sc0002545.1_g000037 Rmu_sc0026087.1_g000001
rosa_roxburghii	Rroxscaffold_1G00074890 Rroxscaffold_4G00329020
rosa_rugosa	Rorug01G0022100 Rorug01G0022200 Rorug04G0390800
rosa_samantha	Rh1AG034800 Rh1AG034900 Rh1BG030600 Rh1BG030700 Rh1BG031300 Rh1CG034200 Rh1DG036400 Rh5AG011900 Rh5BG014400 Rh5CG012900 Rh5DG012200
rosa_wichuraiana	Rw1G002750 Rw5G001120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	2 cut(s)	231, 461
AciI	CCGC	4 cut(s)	231, 498, 512, 1023
AclWI	GGATC	4 cut(s)	342, 355, 457, 537
AcoI	YGGCCR	1 cut(s)	629
AcsI	RAATTY	2 cut(s)	199, 935
AfaI	GTAC	5 cut(s)	135, 424, 563, 641, 977
AgsI	TTSAA	5 cut(s)	205, 246, 553, 581, 656
AleI	CACNNNNGTG	2 cut(s)	818, 899
AluBI	AGCT	7 cut(s)	208, 281, 310, 506, 538, 701, 739
AluI	AGCT	7 cut(s)	208, 281, 310, 506, 538, 701, 739
Alw21I	GWGCWC	2 cut(s)	540, 741
Alw26I	GTCTC	3 cut(s)	289, 589, 724
AlwI	GGATC	4 cut(s)	342, 355, 457, 537
AlwNI	CAGNNNCTG	1 cut(s)	509
Ama87I	CYCGRG	1 cut(s)	539
AoxI	GGCC	3 cut(s)	629, 673, 767
ApaI	GGGCCC	1 cut(s)	677
ApeKI	GCWGC	4 cut(s)	506, 509, 698, 980
ApoI	RAATTY	2 cut(s)	199, 935
AspLEI	GCGC	2 cut(s)	231, 992
AspS9I	GGNCC	4 cut(s)	233, 359, 673, 674
AsuHPI	GGTGA	1 cut(s)	919
AsuNHI	GCTAGC	1 cut(s)	193
AvaI	CYCGRG	1 cut(s)	539
AvaII	GGWCC	2 cut(s)	233, 359
BaeGI	GKGCMC	1 cut(s)	677
BamHI	GGATCC	1 cut(s)	347
BanII	GRGCYC	4 cut(s)	317, 540, 677, 741
BauI	CACGAG	1 cut(s)	734
BbsI	GAAGAC	1 cut(s)	106
Bbv12I	GWGCWC	2 cut(s)	540, 741
BbvI	GCAGC	4 cut(s)	493, 496, 710, 992
BccI	CCATC	5 cut(s)	305, 594, 604, 839, 898
BceAI	ACGGC	4 cut(s)	189, 544, 644, 927
BclI	TGATCA	1 cut(s)	33
BcoDI	GTCTC	3 cut(s)	289, 589, 724
BfaI	CTAG	2 cut(s)	194, 566
BisI	GCNGC	5 cut(s)	498, 507, 510, 699, 981
BlpI	GCTNAGC	1 cut(s)	311
BlsI	GCNGC	5 cut(s)	499, 508, 511, 700, 982
Bme18I	GGWCC	2 cut(s)	233, 359
BmeT110I	CYCGRG	1 cut(s)	539
BmgT120I	GGNCC	4 cut(s)	233, 359, 673, 674
BmiI	GGNNCC	5 cut(s)	75, 349, 360, 605, 675
BmsI	GCATC	1 cut(s)	177
BmtI	GCTAGC	1 cut(s)	197
BpiI	GAAGAC	1 cut(s)	106
Bpu1102I	GCTNAGC	1 cut(s)	311
BpuEI	CTTGAG	2 cut(s)	503, 554
BsaBI	GATNNNNATC	1 cut(s)	830
BsaJI	CCNNGG	1 cut(s)	819
Bse1I	ACTGG	2 cut(s)	622, 779
Bse3DI	GCAATG	1 cut(s)	60
Bse8I	GATNNNNATC	1 cut(s)	830
BseDI	CCNNGG	1 cut(s)	819
BseGI	GGATG	1 cut(s)	489
BseJI	GATNNNNATC	1 cut(s)	830
BseMI	GCAATG	1 cut(s)	60
BseMII	CTCAG	2 cut(s)	302, 426
BseNI	ACTGG	2 cut(s)	622, 779
BseSI	GKGCMC	1 cut(s)	677
BseXI	GCAGC	4 cut(s)	493, 496, 710, 992
Bsh1236I	CGCG	2 cut(s)	231, 461
Bsh1285I	CGRYCG	1 cut(s)	819
BshFI	GGCC	3 cut(s)	631, 675, 769
BsiEI	CGRYCG	1 cut(s)	819
BsiHKAI	GWGCWC	2 cut(s)	540, 741
BsiHKCI	CYCGRG	1 cut(s)	539
BslFI	GGGAC	2 cut(s)	721, 771
BsmAI	GTCTC	3 cut(s)	289, 589, 724
BsmBI	CGTCTC	1 cut(s)	589
BsmFI	GGGAC	2 cut(s)	721, 771
BsnI	GGCC	3 cut(s)	631, 675, 769
BsoBI	CYCGRG	1 cut(s)	539
Bsp120I	GGGCCC	1 cut(s)	673
Bsp1286I	GDGCHC	4 cut(s)	317, 540, 677, 741
Bsp143I	GATC	6 cut(s)	33, 347, 462, 486, 529, 825
Bsp1720I	GCTNAGC	1 cut(s)	311
BspACI	CCGC	4 cut(s)	231, 498, 512, 1023
BspANI	GGCC	3 cut(s)	631, 675, 769
BspCNI	CTCAG	2 cut(s)	303, 427
BspFNI	CGCG	2 cut(s)	231, 461
BspLI	GGNNCC	5 cut(s)	75, 349, 360, 605, 675
BspOI	GCTAGC	1 cut(s)	197
BspPI	GGATC	4 cut(s)	342, 355, 457, 537
BsrDI	GCAATG	1 cut(s)	60
BsrI	ACTGG	2 cut(s)	622, 779
BssECI	CCNNGG	1 cut(s)	819
BssMI	GATC	6 cut(s)	33, 347, 462, 486, 529, 825
BssSI	CACGAG	1 cut(s)	734
Bst2BI	CACGAG	1 cut(s)	734
Bst4CI	ACNGT	9 cut(s)	45, 422, 549, 637, 648, 660, 762, 820, 851
Bst6I	CTCTTC	1 cut(s)	247
BstC8I	GCNNGC	2 cut(s)	195, 293
BstDEI	CTNAG	3 cut(s)	277, 311, 435
BstDSI	CCRYGG	1 cut(s)	819
BstF5I	GGATG	1 cut(s)	489
BstFNI	CGCG	2 cut(s)	231, 461
BstHHI	GCGC	2 cut(s)	231, 992
BstKTI	GATC	6 cut(s)	36, 350, 465, 489, 532, 828
BstMAI	GTCTC	3 cut(s)	289, 589, 724
BstMBI	GATC	6 cut(s)	33, 347, 462, 486, 529, 825
BstMCI	CGRYCG	1 cut(s)	819
BstMWI	GCNNNNNNNGC	6 cut(s)	194, 503, 506, 518, 928, 989
BstSLI	GKGCMC	1 cut(s)	677
BstUI	CGCG	2 cut(s)	231, 461
BstV1I	GCAGC	4 cut(s)	493, 496, 710, 992
BstV2I	GAAGAC	1 cut(s)	106
BstX2I	RGATCY	2 cut(s)	347, 529
BstYI	RGATCY	2 cut(s)	347, 529
BsuRI	GGCC	3 cut(s)	631, 675, 769
BtgI	CCRYGG	1 cut(s)	819
BtgZI	GCGATG	1 cut(s)	169
BtsCI	GGATG	1 cut(s)	489
BtsIMutI	CAGTG	2 cut(s)	41, 615
Cac8I	GCNNGC	2 cut(s)	195, 293
CaiI	CAGNNNCTG	1 cut(s)	509
CfoI	GCGC	2 cut(s)	231, 992
Cfr13I	GGNCC	4 cut(s)	233, 359, 673, 674
Csp6I	GTAC	5 cut(s)	134, 423, 562, 640, 976
CviAII	CATG	4 cut(s)	21, 341, 523, 754
CviQI	GTAC	5 cut(s)	134, 423, 562, 640, 976
DdeI	CTNAG	3 cut(s)	277, 311, 435
DpnI	GATC	6 cut(s)	35, 349, 464, 488, 531, 827
DpnII	GATC	6 cut(s)	33, 347, 462, 486, 529, 825
EaeI	YGGCCR	1 cut(s)	629
Eam1104I	CTCTTC	1 cut(s)	247
EarI	CTCTTC	1 cut(s)	247
Ecl136II	GAGCTC	2 cut(s)	538, 739
Eco24I	GRGCYC	4 cut(s)	317, 540, 677, 741
Eco47I	GGWCC	2 cut(s)	233, 359
Eco53kI	GAGCTC	2 cut(s)	538, 739
Eco88I	CYCGRG	1 cut(s)	539
EcoICRI	GAGCTC	2 cut(s)	538, 739
EcoO109I	RGGNCCY	1 cut(s)	359
EcoT38I	GRGCYC	4 cut(s)	317, 540, 677, 741
Esp3I	CGTCTC	1 cut(s)	589
FaeI	CATG	4 cut(s)	24, 344, 526, 757
FaqI	GGGAC	2 cut(s)	721, 771
FatI	CATG	4 cut(s)	20, 340, 522, 753
FbaI	TGATCA	1 cut(s)	33
Fnu4HI	GCNGC	5 cut(s)	498, 507, 510, 699, 981
FokI	GGATG	1 cut(s)	476
FriOI	GRGCYC	4 cut(s)	317, 540, 677, 741
Fsp4HI	GCNGC	5 cut(s)	498, 507, 510, 699, 981
FspBI	CTAG	2 cut(s)	194, 566
GlaI	GCGC	2 cut(s)	230, 991
GluI	GCNGC	5 cut(s)	498, 507, 510, 699, 981
HaeIII	GGCC	3 cut(s)	631, 675, 769
HhaI	GCGC	2 cut(s)	231, 992
Hin1II	CATG	4 cut(s)	24, 344, 526, 757
Hin6I	GCGC	2 cut(s)	229, 990
HinP1I	GCGC	2 cut(s)	229, 990
HinfI	GANTC	6 cut(s)	84, 304, 451, 621, 691, 861
HphI	GGTGA	1 cut(s)	919
Hpy166II	GTNNAC	1 cut(s)	640
Hpy188I	TCNGA	1 cut(s)	529
Hpy188III	TCNNGA	9 cut(s)	142, 301, 533, 581, 706, 835, 865, 968, 1009
Hpy8I	GTNNAC	1 cut(s)	640
HpyAV	CCTTC	2 cut(s)	338, 955
HpyCH4III	ACNGT	9 cut(s)	45, 422, 549, 637, 648, 660, 762, 820, 851
HpyCH4IV	ACGT	1 cut(s)	710
HpyCH4V	TGCA	6 cut(s)	221, 698, 733, 813, 948, 998
HpyF10VI	GCNNNNNNNGC	6 cut(s)	194, 503, 506, 518, 928, 989
HpyF3I	CTNAG	3 cut(s)	277, 311, 435
HpySE526I	ACGT	1 cut(s)	710
Hsp92II	CATG	4 cut(s)	24, 344, 526, 757
HspAI	GCGC	2 cut(s)	229, 990
Ksp22I	TGATCA	1 cut(s)	33
Kzo9I	GATC	6 cut(s)	33, 347, 462, 486, 529, 825
Lsp1109I	GCAGC	4 cut(s)	493, 496, 710, 992
LweI	GCATC	1 cut(s)	177
MaeI	CTAG	2 cut(s)	194, 566
MaeII	ACGT	1 cut(s)	710
MaeIII	GTNAC	4 cut(s)	47, 613, 648, 907
MalI	GATC	6 cut(s)	35, 349, 464, 488, 531, 827
MboI	GATC	6 cut(s)	33, 347, 462, 486, 529, 825
MboII	GAAGA	8 cut(s)	106, 118, 172, 234, 736, 739, 784, 790
MflI	RGATCY	2 cut(s)	347, 529
MhlI	GDGCHC	4 cut(s)	317, 540, 677, 741
MluCI	AATT	4 cut(s)	68, 199, 428, 935
MlyI	GAGTC	1 cut(s)	445
MmeI	TCCRAC	1 cut(s)	507
MnlI	CCTC	7 cut(s)	128, 246, 349, 759, 806, 997, 1005
MseI	TTAA	3 cut(s)	846, 939, 1036
MslI	CAYNNNNRTG	3 cut(s)	339, 818, 899
MspA1I	CMGCKG	2 cut(s)	310, 506
MvnI	CGCG	2 cut(s)	231, 461
MwoI	GCNNNNNNNGC	6 cut(s)	194, 503, 506, 518, 928, 989
NdeII	GATC	6 cut(s)	33, 347, 462, 486, 529, 825
NheI	GCTAGC	1 cut(s)	193
NlaIII	CATG	4 cut(s)	24, 344, 526, 757
NlaIV	GGNNCC	5 cut(s)	75, 349, 360, 605, 675
NmeAIII	GCCGAG	1 cut(s)	144
NmuCI	GTSAC	3 cut(s)	613, 648, 907
OliI	CACNNNNGTG	2 cut(s)	818, 899
PaeR7I	CTCGAG	1 cut(s)	539
PfeI	GAWTC	5 cut(s)	84, 304, 621, 691, 861
PkrI	GCNGC	5 cut(s)	499, 508, 511, 700, 982
PleI	GAGTC	1 cut(s)	445
PpsI	GAGTC	1 cut(s)	445
PpuMI	RGGWCCY	1 cut(s)	359
Psp124BI	GAGCTC	2 cut(s)	540, 741
Psp5II	RGGWCCY	1 cut(s)	359
PspN4I	GGNNCC	5 cut(s)	75, 349, 360, 605, 675
PspOMI	GGGCCC	1 cut(s)	673
PspPI	GGNCC	4 cut(s)	233, 359, 673, 674
PspPPI	RGGWCCY	1 cut(s)	359
PspXI	VCTCGAGB	1 cut(s)	539
PstNI	CAGNNNCTG	1 cut(s)	509
PsuI	RGATCY	2 cut(s)	347, 529
PvuII	CAGCTG	2 cut(s)	310, 506
RsaI	GTAC	5 cut(s)	135, 424, 563, 641, 977
RsaNI	GTAC	5 cut(s)	134, 423, 562, 640, 976
RseI	CAYNNNNRTG	3 cut(s)	339, 818, 899
SacI	GAGCTC	2 cut(s)	540, 741
SaqAI	TTAA	3 cut(s)	846, 939, 1036
SatI	GCNGC	5 cut(s)	498, 507, 510, 699, 981
Sau3AI	GATC	6 cut(s)	33, 347, 462, 486, 529, 825
Sau96I	GGNCC	4 cut(s)	233, 359, 673, 674
SchI	GAGTC	1 cut(s)	445
SduI	GDGCHC	4 cut(s)	317, 540, 677, 741
SfaNI	GCATC	1 cut(s)	177
Sfr274I	CTCGAG	1 cut(s)	539
SinI	GGWCC	2 cut(s)	233, 359
SlaI	CTCGAG	1 cut(s)	539
SmiMI	CAYNNNNRTG	3 cut(s)	339, 818, 899
SmlI	CTYRAG	3 cut(s)	482, 533, 539
SmoI	CTYRAG	3 cut(s)	482, 533, 539
Sse9I	AATT	4 cut(s)	68, 199, 428, 935
SsiI	CCGC	4 cut(s)	231, 498, 512, 1023
SspMI	CTAG	2 cut(s)	194, 566
SstI	GAGCTC	2 cut(s)	540, 741
TaaI	ACNGT	9 cut(s)	45, 422, 549, 637, 648, 660, 762, 820, 851
TaiI	ACGT	1 cut(s)	713
TaqI	TCGA	3 cut(s)	517, 540, 1002
TasI	AATT	4 cut(s)	68, 199, 428, 935
TauI	GCSGC	1 cut(s)	500
TfiI	GAWTC	5 cut(s)	84, 304, 621, 691, 861
Tru1I	TTAA	3 cut(s)	846, 939, 1036
Tru9I	TTAA	3 cut(s)	846, 939, 1036
TscAI	CASTG	2 cut(s)	48, 622
TseFI	GTSAC	3 cut(s)	613, 648, 907
TseI	GCWGC	4 cut(s)	506, 509, 698, 980
Tsp45I	GTSAC	3 cut(s)	613, 648, 907
TspDTI	ATGAA	4 cut(s)	49, 118, 172, 357
TspRI	CASTG	2 cut(s)	48, 622
VpaK11BI	GGWCC	2 cut(s)	233, 359
XapI	RAATTY	2 cut(s)	199, 935
XhoI	CTCGAG	1 cut(s)	539
XspI	CTAG	2 cut(s)	194, 566

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.