Rroxscaffold_4G00329020

acyl-CoA--sterol O-acyltransferase 1-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Reverse (-)
62154770 .. 62155891
1122 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00329020.1

Sequence Viewer

Length: 1122 bp
ATGGAAGGTGAATTTGGTAACTTCGTTGAGGTATTAACTTCAATATTTGTTTGCATATTCTATTCCTACTCCCTTGGCAAAATAGTCCCCAAAGGTAAAACCAGACTCCTTTGTGTTCTCCCAGTTGTGTGTCTCTTCTTGTACCTCCCTCTTCACCTCTCCTCTGTACATCTTGGAGGTGCCACTGCTTTTTTCATTTCATGGCTTGGCAGCTTCAAGCTTCTGCTTTTCGCCTTTGACAAAGGTCCTTTGGCTTCAGACCCATCAATCTCGATTGGACGTTTCATGGCCATTGCTTGCCTCCCAATCGAAATCCAAGAAAACACACCTCCAAAACCTCAAAATGCCCAAATTGAAACCAACCCATCTCCATCAAAACCTCATCTGAATGGCCAAAATGGGAAAACCCCACATCCCAGAAACACCAAATCAACAACCCTGAATCATGTAATCAAGGGCTTCCTTTTGGCCATTCTAATTGGGGTCCTTTATTATAGCGAGCATTTCCATCCAAAGCTCATCTTAGTGCTTCATTGCCTTTACATATATCTTCTCCTAGAGTTCCTCCTAGCAATGGTAGGAGTCCTGGCTCGAGCCCTTTTGGGATTGGAACTCAAGCCCCACTTCAACGAGCCCTACCTCTCCACATCGCTACAAGACTTCTGGGGCAGAAGATGGAACCTCATGGCCACCAGTATCCTACGCCCGGCCGTATACGAACCCGTCCTCGACTTCTCCACGCGCTTCATCGGCCGGAAATGGGCTCCAATTCCTGCTGTGATGGGAAGCTTCGTAGTGTCCGGGCTCATGCACGAGCTGATTTACTACTACCAGGGACGCGTGAAGCCCACGTGGGAGGTTACGTGGTTCTTCGTTCTGCAGGGGTTGTGTTTGACACTGGAGATCGTTTTGAAGAAGGCGTTGAGGGGCAGGTTCCGGTTGCCGACGCCGGTCTCTGTGGTGTTGACAGTTGGGTTTGTGGTTGCGACTTGCTTCTGGCTCTTCTTTCCGCAGTTTCTTCGGAGCAAGGCTGATGTTAGAATGCTCGAAGAGTATGTTGCTTTTGGTGCGTACATGAAGAATGTGGCTCGAACTTTCCAAACATCTTTGTCTAGCTCATGA

Protein Analysis

373

Amino Acids

42.12

Weight (kDa)

9.43

Isoelectric Point (pI)

36.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MBOAT_2 PF13813 206 - 292 1.4e-18 Membrane bound O-acyl transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 921
AccB1I GGYRCC 1 cut(s) 179
AccI GTMKAC 1 cut(s) 714
AccII CGCG 2 cut(s) 742, 840
AciI CCGC 1 cut(s) 1010
AcoI YGGCCR 6 cut(s) 288, 391, 468, 687, 708, 751
AcsI RAATTY 1 cut(s) 11
AcuI CTGAAG 1 cut(s) 240
AcvI CACGTG 1 cut(s) 852
AcyI GRCGYC 1 cut(s) 947
AfaI GTAC 3 cut(s) 143, 168, 1073
AfiI CCNNNNNNNGG 3 cut(s) 574, 706, 760
AflIII ACRYGT 1 cut(s) 838
AgsI TTSAA 5 cut(s) 42, 217, 356, 628, 913
AjnI CCWGG 2 cut(s) 585, 831
AjuI GAANNNNNNNTTGG 1 cut(s) 29
AluBI AGCT 6 cut(s) 213, 220, 517, 789, 817, 1116
AluI AGCT 6 cut(s) 213, 220, 517, 789, 817, 1116
Alw26I GTCTC 2 cut(s) 137, 958
Ama87I CYCGRG 1 cut(s) 591
AoxI GGCC 6 cut(s) 288, 391, 468, 687, 708, 751
ApeKI GCWGC 1 cut(s) 210
ApoI RAATTY 1 cut(s) 11
AspLEI GCGC 1 cut(s) 744
AspS9I GGNCC 2 cut(s) 245, 484
AsuC2I CCSGG 2 cut(s) 707, 802
AsuHPI GGTGA 2 cut(s) 20, 146
AvaI CYCGRG 1 cut(s) 591
AvaII GGWCC 2 cut(s) 245, 484
BalI TGGCCA 4 cut(s) 290, 393, 470, 689
BanI GGYRCC 1 cut(s) 179
BanII GRGCYC 4 cut(s) 598, 636, 766, 807
BauI CACGAG 1 cut(s) 812
BbrPI CACGTG 1 cut(s) 852
BbvI GCAGC 1 cut(s) 222
BccI CCATC 6 cut(s) 271, 373, 379, 516, 669, 775
BceAI ACGGC 1 cut(s) 695
BcgI CGANNNNNNTGC 2 cut(s) 1001, 1035
BciT130I CCWGG 2 cut(s) 587, 833
BciVI GTATCC 1 cut(s) 707
BcnI CCSGG 2 cut(s) 707, 802
BcoDI GTCTC 2 cut(s) 137, 958
BfaI CTAG 3 cut(s) 557, 569, 1113
BfmI CTRYAG 1 cut(s) 878
BfuAI ACCTGC 1 cut(s) 921
BfuI GTATCC 1 cut(s) 707
BisI GCNGC 1 cut(s) 211
BlsI GCNGC 1 cut(s) 212
Bme1390I CCNGG 4 cut(s) 587, 707, 802, 833
Bme18I GGWCC 2 cut(s) 245, 484
BmeT110I CYCGRG 1 cut(s) 591
BmgT120I GGNCC 2 cut(s) 245, 484
BmiI GGNNCC 5 cut(s) 181, 485, 680, 765, 935
BmrFI CCNGG 4 cut(s) 587, 707, 802, 833
BmrI ACTGGG 1 cut(s) 116
BmuI ACTGGG 1 cut(s) 116
BoxI GACNNNNGTC 2 cut(s) 243, 950
BpmI CTGGAG 1 cut(s) 920
BpuEI CTTGAG 1 cut(s) 599
BpuMI CCSGG 2 cut(s) 707, 802
BsaAI YACGTR 2 cut(s) 852, 864
BsaHI GRCGYC 1 cut(s) 947
BsaI GGTCTC 1 cut(s) 958
BsaJI CCNNGG 2 cut(s) 73, 832
BsaWI WCCGGW 1 cut(s) 936
BsaXI ACNNNNNCTCC 2 cut(s) 848, 878
Bsc4I CCNNNNNNNGG 3 cut(s) 574, 706, 760
Bse118I RCCGGY 1 cut(s) 949
Bse1I ACTGG 3 cut(s) 122, 693, 903
Bse3DI GCAATG 3 cut(s) 291, 532, 579
BseBI CCWGG 2 cut(s) 587, 833
BseDI CCNNGG 2 cut(s) 73, 832
BseGI GGATG 2 cut(s) 412, 508
BseLI CCNNNNNNNGG 3 cut(s) 574, 706, 760
BseMI GCAATG 3 cut(s) 291, 532, 579
BseNI ACTGG 3 cut(s) 122, 693, 903
BseRI GAGGAG 1 cut(s) 151
BseX3I CGGCCG 2 cut(s) 708, 751
BseXI GCAGC 1 cut(s) 222
Bsh1236I CGCG 2 cut(s) 742, 840
Bsh1285I CGRYCG 2 cut(s) 711, 754
BshFI GGCC 6 cut(s) 290, 393, 470, 689, 710, 753
BshNI GGYRCC 1 cut(s) 179
BsiEI CGRYCG 2 cut(s) 711, 754
BsiHKCI CYCGRG 1 cut(s) 591
BsiSI CCGG 5 cut(s) 707, 754, 801, 937, 950
BslFI GGGAC 2 cut(s) 71, 849
BslI CCNNNNNNNGG 3 cut(s) 574, 706, 760
BsmAI GTCTC 2 cut(s) 137, 958
BsmFI GGGAC 2 cut(s) 71, 849
BsmI GAATGC 1 cut(s) 1047
BsnI GGCC 6 cut(s) 290, 393, 470, 689, 710, 753
Bso31I GGTCTC 1 cut(s) 958
BsoBI CYCGRG 1 cut(s) 591
Bsp1286I GDGCHC 4 cut(s) 598, 636, 766, 807
Bsp1407I TGTACA 1 cut(s) 166
Bsp143I GATC 1 cut(s) 903
BspACI CCGC 1 cut(s) 1010
BspANI GGCC 6 cut(s) 290, 393, 470, 689, 710, 753
BspFNI CGCG 2 cut(s) 742, 840
BspHI TCATGA 1 cut(s) 1118
BspLI GGNNCC 5 cut(s) 181, 485, 680, 765, 935
BspMAI CTGCAG 1 cut(s) 882
BspMI ACCTGC 1 cut(s) 921
BspQI GCTCTTC 1 cut(s) 1007
BspT107I GGYRCC 1 cut(s) 179
BspTNI GGTCTC 1 cut(s) 958
BsrDI GCAATG 3 cut(s) 291, 532, 579
BsrFI RCCGGY 1 cut(s) 949
BsrGI TGTACA 1 cut(s) 166
BsrI ACTGG 3 cut(s) 122, 693, 903
BssAI RCCGGY 1 cut(s) 949
BssECI CCNNGG 2 cut(s) 73, 832
BssMI GATC 1 cut(s) 903
BssNAI GTATAC 1 cut(s) 715
BssNI GRCGYC 1 cut(s) 947
BssSI CACGAG 1 cut(s) 812
BssT1I CCWWGG 1 cut(s) 73
Bst1107I GTATAC 1 cut(s) 715
Bst2BI CACGAG 1 cut(s) 812
Bst2UI CCWGG 2 cut(s) 587, 833
Bst4CI ACNGT 1 cut(s) 970
Bst6I CTCTTC 4 cut(s) 140, 156, 1007, 1044
BstACI GRCGYC 1 cut(s) 947
BstAUI TGTACA 1 cut(s) 166
BstBAI YACGTR 2 cut(s) 852, 864
BstC8I GCNNGC 2 cut(s) 298, 500
BstDEI CTNAG 1 cut(s) 523
BstF5I GGATG 2 cut(s) 412, 508
BstFNI CGCG 2 cut(s) 742, 840
BstHHI GCGC 1 cut(s) 744
BstKTI GATC 1 cut(s) 906
BstMAI GTCTC 2 cut(s) 137, 958
BstMBI GATC 1 cut(s) 903
BstMCI CGRYCG 2 cut(s) 711, 754
BstMWI GCNNNNNNNGC 2 cut(s) 750, 1067
BstNI CCWGG 2 cut(s) 587, 833
BstPAI GACNNNNGTC 2 cut(s) 243, 950
BstSCI CCNGG 4 cut(s) 585, 705, 800, 831
BstSFI CTRYAG 1 cut(s) 878
BstUI CGCG 2 cut(s) 742, 840
BstV1I GCAGC 1 cut(s) 222
BstZ17I GTATAC 1 cut(s) 715
BstZI CGGCCG 2 cut(s) 708, 751
BsuI GTATCC 1 cut(s) 707
BsuRI GGCC 6 cut(s) 290, 393, 470, 689, 710, 753
BtgZI GCGATG 1 cut(s) 633
BtsCI GGATG 2 cut(s) 412, 508
BtsI GCAGTG 1 cut(s) 183
BtsIMutI CAGTG 2 cut(s) 183, 896
BveI ACCTGC 1 cut(s) 921
Cac8I GCNNGC 2 cut(s) 298, 500
CciI TCATGA 1 cut(s) 1118
CfoI GCGC 1 cut(s) 744
Cfr10I RCCGGY 1 cut(s) 949
Cfr13I GGNCC 2 cut(s) 245, 484
CseI GACGC 2 cut(s) 846, 955
Csp6I GTAC 3 cut(s) 142, 167, 1072
CviAII CATG 7 cut(s) 201, 286, 446, 685, 808, 1075, 1119
CviQI GTAC 3 cut(s) 142, 167, 1072
DdeI CTNAG 1 cut(s) 523
DpnI GATC 1 cut(s) 905
DpnII GATC 1 cut(s) 903
EaeI YGGCCR 6 cut(s) 288, 391, 468, 687, 708, 751
EagI CGGCCG 2 cut(s) 708, 751
Eam1104I CTCTTC 4 cut(s) 140, 156, 1007, 1044
EarI CTCTTC 4 cut(s) 140, 156, 1007, 1044
EclXI CGGCCG 2 cut(s) 708, 751
Eco130I CCWWGG 1 cut(s) 73
Eco24I GRGCYC 4 cut(s) 598, 636, 766, 807
Eco31I GGTCTC 1 cut(s) 958
Eco47I GGWCC 2 cut(s) 245, 484
Eco52I CGGCCG 2 cut(s) 708, 751
Eco57I CTGAAG 1 cut(s) 240
Eco72I CACGTG 1 cut(s) 852
Eco88I CYCGRG 1 cut(s) 591
EcoO109I RGGNCCY 2 cut(s) 245, 484
EcoRII CCWGG 2 cut(s) 585, 831
EcoT14I CCWWGG 1 cut(s) 73
EcoT38I GRGCYC 4 cut(s) 598, 636, 766, 807
ErhI CCWWGG 1 cut(s) 73
FaeI CATG 7 cut(s) 204, 289, 449, 688, 811, 1078, 1122
FalI AAGNNNNNCTT 4 cut(s) 506, 538, 608, 640
FaqI GGGAC 2 cut(s) 71, 849
FatI CATG 7 cut(s) 200, 285, 445, 684, 807, 1074, 1118
FblI GTMKAC 1 cut(s) 714
Fnu4HI GCNGC 1 cut(s) 211
FokI GGATG 2 cut(s) 399, 495
FriOI GRGCYC 4 cut(s) 598, 636, 766, 807
Fsp4HI GCNGC 1 cut(s) 211
FspBI CTAG 3 cut(s) 557, 569, 1113
GlaI GCGC 1 cut(s) 743
GluI GCNGC 1 cut(s) 211
GsuI CTGGAG 1 cut(s) 920
HaeIII GGCC 6 cut(s) 290, 393, 470, 689, 710, 753
HapII CCGG 5 cut(s) 707, 754, 801, 937, 950
HgaI GACGC 2 cut(s) 846, 955
HhaI GCGC 1 cut(s) 744
Hin1I GRCGYC 1 cut(s) 947
Hin1II CATG 7 cut(s) 204, 289, 449, 688, 811, 1078, 1122
Hin6I GCGC 1 cut(s) 742
HinP1I GCGC 1 cut(s) 742
HincII GTYRAC 1 cut(s) 966
HindII GTYRAC 1 cut(s) 966
HindIII AAGCTT 2 cut(s) 218, 787
HinfI GANTC 3 cut(s) 105, 442, 582
HpaII CCGG 5 cut(s) 707, 754, 801, 937, 950
HphI GGTGA 2 cut(s) 20, 146
Hpy166II GTNNAC 2 cut(s) 715, 966
Hpy188I TCNGA 3 cut(s) 259, 387, 1023
Hpy188III TCNNGA 2 cut(s) 271, 1119
Hpy8I GTNNAC 2 cut(s) 715, 966
Hpy99I CGWCG 1 cut(s) 949
HpyAV CCTTC 1 cut(s) 910
HpyCH4III ACNGT 1 cut(s) 970
HpyCH4IV ACGT 3 cut(s) 280, 851, 863
HpyCH4V TGCA 3 cut(s) 54, 811, 880
HpyF10VI GCNNNNNNNGC 2 cut(s) 750, 1067
HpyF3I CTNAG 1 cut(s) 523
HpySE526I ACGT 3 cut(s) 280, 851, 863
Hsp92I GRCGYC 1 cut(s) 947
Hsp92II CATG 7 cut(s) 204, 289, 449, 688, 811, 1078, 1122
HspAI GCGC 1 cut(s) 742
Kzo9I GATC 1 cut(s) 903
LguI GCTCTTC 1 cut(s) 1007
LmnI GCTCC 2 cut(s) 769, 1023
Lsp1109I GCAGC 1 cut(s) 222
MaeI CTAG 3 cut(s) 557, 569, 1113
MaeII ACGT 3 cut(s) 280, 851, 863
MaeIII GTNAC 2 cut(s) 17, 859
MalI GATC 1 cut(s) 905
MboI GATC 1 cut(s) 903
MhlI GDGCHC 4 cut(s) 598, 636, 766, 807
MlsI TGGCCA 4 cut(s) 290, 393, 470, 689
MluCI AATT 4 cut(s) 11, 351, 477, 768
MluI ACGCGT 1 cut(s) 838
MluNI TGGCCA 4 cut(s) 290, 393, 470, 689
MlyI GAGTC 2 cut(s) 99, 591
Mox20I TGGCCA 4 cut(s) 290, 393, 470, 689
MscI TGGCCA 4 cut(s) 290, 393, 470, 689
MseI TTAA 1 cut(s) 35
MslI CAYNNNNRTG 2 cut(s) 387, 524
Msp20I TGGCCA 4 cut(s) 290, 393, 470, 689
MspI CCGG 5 cut(s) 707, 754, 801, 937, 950
MspR9I CCNGG 4 cut(s) 587, 707, 802, 833
Mva1269I GAATGC 1 cut(s) 1047
MvaI CCWGG 2 cut(s) 587, 833
MvnI CGCG 2 cut(s) 742, 840
MwoI GCNNNNNNNGC 2 cut(s) 750, 1067
NciI CCSGG 2 cut(s) 707, 802
NdeII GATC 1 cut(s) 903
NlaIII CATG 7 cut(s) 204, 289, 449, 688, 811, 1078, 1122
NlaIV GGNNCC 5 cut(s) 181, 485, 680, 765, 935
PaeR7I CTCGAG 1 cut(s) 591
PagI TCATGA 1 cut(s) 1118
PciSI GCTCTTC 1 cut(s) 1007
PctI GAATGC 1 cut(s) 1047
PfeI GAWTC 1 cut(s) 442
PkrI GCNGC 1 cut(s) 212
PleI GAGTC 2 cut(s) 99, 590
PmaCI CACGTG 1 cut(s) 852
PmlI CACGTG 1 cut(s) 852
PpsI GAGTC 2 cut(s) 99, 590
Ppu21I YACGTR 2 cut(s) 852, 864
PpuMI RGGWCCY 2 cut(s) 245, 484
PshAI GACNNNNGTC 2 cut(s) 243, 950
Psp5II RGGWCCY 2 cut(s) 245, 484
Psp6I CCWGG 2 cut(s) 585, 831
PspCI CACGTG 1 cut(s) 852
PspGI CCWGG 2 cut(s) 585, 831
PspN4I GGNNCC 5 cut(s) 181, 485, 680, 765, 935
PspPI GGNCC 2 cut(s) 245, 484
PspPPI RGGWCCY 2 cut(s) 245, 484
PspXI VCTCGAGB 1 cut(s) 591
PstI CTGCAG 1 cut(s) 882
RsaI GTAC 3 cut(s) 143, 168, 1073
RsaNI GTAC 3 cut(s) 142, 167, 1072
RseI CAYNNNNRTG 2 cut(s) 387, 524
SapI GCTCTTC 1 cut(s) 1007
SaqAI TTAA 1 cut(s) 35
SatI GCNGC 1 cut(s) 211
Sau3AI GATC 1 cut(s) 903
Sau96I GGNCC 2 cut(s) 245, 484
SchI GAGTC 2 cut(s) 99, 591
ScrFI CCNGG 4 cut(s) 587, 707, 802, 833
SduI GDGCHC 4 cut(s) 598, 636, 766, 807
SfcI CTRYAG 1 cut(s) 878
Sfr274I CTCGAG 1 cut(s) 591
SinI GGWCC 2 cut(s) 245, 484
SlaI CTCGAG 1 cut(s) 591
SmiMI CAYNNNNRTG 2 cut(s) 387, 524
SmlI CTYRAG 2 cut(s) 591, 614
SmoI CTYRAG 2 cut(s) 591, 614
Sse9I AATT 4 cut(s) 11, 351, 477, 768
SsiI CCGC 1 cut(s) 1010
SspI AATATT 1 cut(s) 45
SspMI CTAG 3 cut(s) 557, 569, 1113
StyD4I CCNGG 4 cut(s) 585, 705, 800, 831
StyI CCWWGG 1 cut(s) 73
TaaI ACNGT 1 cut(s) 970
TaiI ACGT 3 cut(s) 283, 854, 866
TaqI TCGA 6 cut(s) 272, 309, 592, 729, 1047, 1090
TasI AATT 4 cut(s) 11, 351, 477, 768
TatI WGTACW 1 cut(s) 166
TfiI GAWTC 1 cut(s) 442
Tru1I TTAA 1 cut(s) 35
Tru9I TTAA 1 cut(s) 35
TscAI CASTG 2 cut(s) 190, 903
TseI GCWGC 1 cut(s) 210
TspDTI ATGAA 6 cut(s) 184, 189, 274, 521, 736, 1091
TspRI CASTG 2 cut(s) 190, 903
VpaK11BI GGWCC 2 cut(s) 245, 484
XapI RAATTY 1 cut(s) 11
XhoI CTCGAG 1 cut(s) 591
XmiI GTMKAC 1 cut(s) 714
XspI CTAG 3 cut(s) 557, 569, 1113
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.