Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003366

Physical Location & Seq

Genomic Coordinates Reverse (-)

20753565 .. 20756690

Gene Structure 3126 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G55950.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2445 bp

ATGAAGAGGTTTATCAACTCAACCGTGACGTTTTCCGTCACCGTCACCATCGCCGTTATCATCTTCTTCCTCTTGTCTCCCGTCACCTCCTTAGGTTCAGGCTCAACTTACGCAGTCGTATACGGCTCCGACACCGTCTGCGCATTGATCTCCGGTCAACCCACACAACGTATCCTCTGTTACGACACGCGTCTTAATATCAACGTCACTCTAAACCCCGGCGTCTCATTCTCCTCAATAGCCGCCGGAGATAATTTCCTCTGCGGTATACGCTCCGGTGGTTACAGCCTTCTCTGTTGGGATAACATCGGAAGCTACTCTCCAAACCGGAAACGAATCTACCAAAACGACAACGTTTTACTCGAGACTCTCTCCGTCGGGGATAAACAAATCTGCGCAACCGTTAACGGTACAAATTCCTTAAAATGCTGGAGAGGTTCCGTTTCCGATCAATCAAAACCTCCGAACGAGAGATTCCGATCAATTTCATCCGGCGTTGGTTTCTCCTGCGGCGTTTCGATTCGAAATAACCGAATCCTTTGCTGGGGAACCGATCCGGTTAAATCGAATCAGATCCAAACCGGATTCGGAAACACGCCGATGGTGACCATCTCCGCAGGTAAATCACACGCTTGTGGATTAAACACTACTGGGAATTTGATTTGCATCGGAAACAACGATTCTGGTCAGCTCAATGTTATTGCTCCAGATCAACCTAACCTTTACTCATCATCTCTCTCTCTCGGATCAAATTTCACCTGCGCGATGCGAATCTCGAATAATTCTGTGGTTTGTTGGGGCGGAGGAGCAGAGAGATTCAACAATGTCACGGATTCGATCTCTTTCGAATCGATTTCCTCGGGTCCGGGTCTAATTTGCGGGTTGATTTCAAGTAATCTCTCAATCATGTGTTGGAATCCTACAAATTTCTCCAGAATCTTCCTCCCTTTCCCAGAAGTTTTACCAGGTCCTTGCGTTGAATCATCATCATCCTCTCTTTGCTCTTGTGGTGTTTATCCACAATCTGATAAGCTCTGTTCTGGTACTGGCTCGATTTGTAAATCATGTCCGATTCAATTTCCAGCGAGTCCTCCGAGTCAATTTCCTCTTCCACCACCACCACCACCACCACCGCCATCACCGTCAACTTCATCTCCACCGTCGAAAGCTTTAACAAGAGGATTATTAGCGTTTGCGATCGTTGGATCAGTTGGAGCATTTGCAGGGATCTGTAGTGTGGTTTACTGTTTATGGACTGGAGTTTGCTTGGGGAAGAAGAAAGTTCATAACTCGGTTCAACCGACGATAACTCGCGGTGGTTCTAATAGCCGGTCTAACAGTTCGAATAGCCGGTCGTTATCTATAAGACGTCAAGGATCGAGAATGCTATCAATGAGGAGGCAGAGAAGTGGAACATCGTCGATGAAGCACGCCGATAAAGCGGAAGAGTTTTCGTTCTCCGAGCTTGCTTCGGCTACCGGAAACTTCTCTCTAGAGAACAAAATCGGTTCGGGGAGCTTTGGTGTTGTTTACAGAGGTAAACTCAATGACGGGAGAGAAGTAGCGATCAAACGCGGGGAAGTAAACGCGAAGATGAAGAAGTTTCAAGAGAAAGAAACCGCGTTTGATTCGGAAATCGCGTTTTTATCGAGGCTTCATCATAAGCATTTGGTGAGACTAGTTGGTTACTGCGAAGAAAGAGAAGAGAAGCTTCTCGTTTACGATTACATGAAGAATGGTGCGCTTTACGATCATCTACACGACAAGAACAACGTCGAAAAACATAGTAGCTTGATCAATTCTTGGAAAATGCGGATCAAAATCGCGTTAGATGCGGCTAGAGGAATCGAGTATCTACATAACTACGCAGTGCCACCGATTATTCATAGAGATATTAAGTCGTCTAACATCTTGCTTGACTCTAATTGGGTCGCTAGAGTTTCGGATTTCGGGTTATCATTAATGGGTCCGGTGCTAGGGAAAGATCATAATCCTTATCAACGTCCAACGAAAGCTGCGGGGACGGTCGGATATATTGATCCAGAGTATTATAGTCTTAATGTTTTAACGGATAAGAGCGATGTGTATGGACTAGGAGTGGTGTTGTTAGAATTGTTGACCGGGAAAAGAGCGATATTTAGGAACAATGGTGATGTGGAGGAGGAGGAAGGGTGTGTTCCGGTGCATTTGGTGGATTACTCGGTTCCGGCGATAACGGCTGATGAGTTGAGTACAATTTTGGATCCGAGAGTTGGATCACCGGAGCTAGGTGAAGGAGATGCGGTGGAGCTGGTGGCTTATACGGCTATGCATTGTGTGAATGCGGAAGGGAGAAACAGGCCGACAATGACGGATATAGTAGGGAATTTGGAGAGAGCATTGGATTTGTGTGGGGATAGTCATGGGAGTATCTCTAGTGGCATTTGTTCTATTGTCTCTGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0042802 GO:0042803 GO:0046983

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05169 map04010 map04064 map04620 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05169

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr RCC1_2

Protein Analysis

814

Amino Acids

87.68

Weight (kDa)

8.33

Isoelectric Point (pI)

41.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WD40_RLD	PF25390	140 - 267	1.8e-06	RCC1-like domain
RCC1_2	PF13540	202 - 230	9e-08	Regulator of chromosome condensation (RCC1) repeat
Pkinase	PF00069	497 - 724	3.6e-41	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	497 - 788	9.9e-41	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003366)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55950
fragaria_vesca	FvH4_3g38710 FvH4_7g24490
malus_domestica	MD00G1166500.v1.1 MD01G1153100.v1.1 MD03G1068800.v1.1 MD07G1222100.v1.1 MD11G1073300.v1.1
prunus_persica	Prupe.2G250300_v2.0.a1 Prupe.6G056600_v2.0.a1
pyrus_communis	pycom01g17070 pycom03g05510
rosa_chinensis	RchiOBHm_Chr1g0370251 RchiOBHm_Chr5g0065501 RchiOBHm_Chr5g0069861
rosa_laevigata	RLG00000027065 RLG00000036103
rosa_multiflora	Rmu_co8321277.1_g000001 Rmu_sc0000738.1_g000002 Rmu_sc0026893.1_g000001 Rmu_sc0037931.1_g000001
rosa_roxburghii	Rroxscaffold_1G00011190 Rroxscaffold_4G00286710 Rroxscaffold_4G00287300
rosa_rugosa	Rorug01G0355200 Rorug05G0400300
rosa_samantha	Rh1AG363800 Rh1BG326900 Rh1CG340200 Rh1DG357300 Rh5AG457400 Rh5BG476200 Rh5CG500000 Rh5DG488000
rosa_wichuraiana	Rw1G032010 Rw5G042700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	767
AatII	GACGTC	1 cut(s)	1372
Acc16I	TGCGCA	2 cut(s)	142, 397
Acc36I	ACCTGC	2 cut(s)	608, 767
AccI	GTMKAC	2 cut(s)	120, 268
AccII	CGCG	8 cut(s)	190, 764, 1314, 1575, 1589, 1622, 1640, 1826
AclI	AACGTT	1 cut(s)	354
AcsI	RAATTY	5 cut(s)	415, 655, 751, 925, 2365
AcyI	GRCGYC	2 cut(s)	222, 1369
AfaI	GTAC	3 cut(s)	412, 1045, 2233
AfiI	CCNNNNNNNGG	4 cut(s)	544, 1976, 2252, 2267
AflIII	ACRYGT	1 cut(s)	188
AgsI	TTSAA	6 cut(s)	820, 891, 980, 1076, 1298, 1607
AhlI	ACTAGT	1 cut(s)	1678
AjnI	CCWGG	1 cut(s)	964
AleI	CACNNNNGTG	1 cut(s)	633
Alw26I	GTCTC	5 cut(s)	81, 229, 359, 1669, 2440
Ama87I	CYCGRG	2 cut(s)	362, 859
AoxI	GGCC	1 cut(s)	2339
ApeKI	GCWGC	1 cut(s)	2015
ApoI	RAATTY	5 cut(s)	415, 655, 751, 925, 2365
ArsI	GACNNNNNNTTYG	2 cut(s)	1337, 1369
AseI	ATTAAT	1 cut(s)	1961
AspLEI	GCGC	4 cut(s)	143, 398, 764, 1744
AspS9I	GGNCC	3 cut(s)	863, 968, 1967
AsuC2I	CCSGG	3 cut(s)	219, 867, 2122
AsuII	TTCGAA	3 cut(s)	523, 846, 1343
AvaI	CYCGRG	2 cut(s)	362, 859
AvaII	GGWCC	3 cut(s)	863, 968, 1967
AxyI	CCTNAGG	1 cut(s)	91
BamHI	GGATCC	1 cut(s)	2242
BbvI	GCAGC	1 cut(s)	2002
BccI	CCATC	4 cut(s)	56, 595, 617, 1144
BceAI	ACGGC	4 cut(s)	38, 139, 2232, 2319
BcgI	CGANNNNNNTGC	2 cut(s)	522, 556
BciT130I	CCWGG	1 cut(s)	966
BciVI	GTATCC	1 cut(s)	182
BclI	TGATCA	1 cut(s)	1794
BcnI	CCSGG	3 cut(s)	219, 867, 2122
BcoDI	GTCTC	5 cut(s)	81, 229, 359, 1669, 2440
BcuI	ACTAGT	1 cut(s)	1678
BfaI	CTAG	8 cut(s)	1493, 1679, 1839, 1935, 1976, 2093, 2267, 2415
BfmI	CTRYAG	1 cut(s)	1231
BfuAI	ACCTGC	2 cut(s)	608, 767
BfuI	GTATCC	1 cut(s)	182
BisI	GCNGC	4 cut(s)	243, 511, 1836, 2016
BlsI	GCNGC	4 cut(s)	244, 512, 1837, 2017
Bme1390I	CCNGG	4 cut(s)	219, 867, 966, 2122
Bme18I	GGWCC	3 cut(s)	863, 968, 1967
BmeT110I	CYCGRG	2 cut(s)	362, 859
BmgT120I	GGNCC	3 cut(s)	863, 968, 1967
BmiI	GGNNCC	7 cut(s)	127, 439, 550, 864, 1968, 2205, 2244
BmrFI	CCNGG	4 cut(s)	219, 867, 966, 2122
BmrI	ACTGGG	1 cut(s)	660
BmsI	GCATC	4 cut(s)	675, 756, 1822, 2269
BmuI	ACTGGG	1 cut(s)	660
BoxI	GACNNNNGTC	1 cut(s)	189
BplI	GAGNNNNNCTC	4 cut(s)	356, 388, 1527, 1559
BpmI	CTGGAG	4 cut(s)	451, 690, 916, 1278
Bpu14I	TTCGAA	3 cut(s)	523, 846, 1343
BpuMI	CCSGG	3 cut(s)	219, 867, 2122
Bsa29I	ATCGAT	1 cut(s)	851
BsaBI	GATNNNNATC	5 cut(s)	478, 665, 770, 1820, 1989
BsaHI	GRCGYC	2 cut(s)	222, 1369
BsaJI	CCNNGG	2 cut(s)	217, 858
BsaWI	WCCGGW	9 cut(s)	152, 275, 327, 556, 581, 1478, 1969, 2179, 2260
BsaXI	ACNNNNNCTCC	8 cut(s)	1138, 1168, 1507, 1537, 2156, 2186, 2268, 2298
Bsc4I	CCNNNNNNNGG	4 cut(s)	544, 1976, 2252, 2267
Bse118I	RCCGGY	2 cut(s)	1329, 1350
Bse1I	ACTGG	3 cut(s)	655, 1051, 1261
Bse21I	CCTNAGG	1 cut(s)	91
Bse8I	GATNNNNATC	5 cut(s)	478, 665, 770, 1820, 1989
BseBI	CCWGG	1 cut(s)	966
BseCI	ATCGAT	1 cut(s)	851
BseDI	CCNNGG	2 cut(s)	217, 858
BseGI	GGATG	2 cut(s)	488, 989
BseJI	GATNNNNATC	5 cut(s)	478, 665, 770, 1820, 1989
BseLI	CCNNNNNNNGG	4 cut(s)	544, 1976, 2252, 2267
BseNI	ACTGG	3 cut(s)	655, 1051, 1261
BseRI	GAGGAG	5 cut(s)	223, 819, 1411, 2174, 2177
BseXI	GCAGC	1 cut(s)	2002
BseYI	CCCAGC	1 cut(s)	543
Bsh1236I	CGCG	8 cut(s)	190, 764, 1314, 1575, 1589, 1622, 1640, 1826
Bsh1285I	CGRYCG	3 cut(s)	1200, 1355, 2028
BshFI	GGCC	1 cut(s)	2341
BshVI	ATCGAT	1 cut(s)	851
BsiEI	CGRYCG	3 cut(s)	1200, 1355, 2028
BsiHKCI	CYCGRG	2 cut(s)	362, 859
BslFI	GGGAC	1 cut(s)	2035
BslI	CCNNNNNNNGG	4 cut(s)	544, 1976, 2252, 2267
BsmAI	GTCTC	5 cut(s)	81, 229, 359, 1669, 2440
BsmBI	CGTCTC	1 cut(s)	229
BsmFI	GGGAC	1 cut(s)	2035
BsmI	GAATGC	2 cut(s)	1389, 2326
BsnI	GGCC	1 cut(s)	2341
BsoBI	CYCGRG	2 cut(s)	362, 859
Bsp119I	TTCGAA	3 cut(s)	523, 846, 1343
BspANI	GGCC	1 cut(s)	2341
BspDI	ATCGAT	1 cut(s)	851
BspFNI	CGCG	8 cut(s)	190, 764, 1314, 1575, 1589, 1622, 1640, 1826
BspLI	GGNNCC	7 cut(s)	127, 439, 550, 864, 1968, 2205, 2244
BspMI	ACCTGC	2 cut(s)	608, 767
BspT104I	TTCGAA	3 cut(s)	523, 846, 1343
BsrFI	RCCGGY	2 cut(s)	1329, 1350
BsrI	ACTGG	3 cut(s)	655, 1051, 1261
BssAI	RCCGGY	2 cut(s)	1329, 1350
BssECI	CCNNGG	2 cut(s)	217, 858
BssNAI	GTATAC	2 cut(s)	121, 269
BssNI	GRCGYC	2 cut(s)	222, 1369
Bst1107I	GTATAC	2 cut(s)	121, 269
Bst2UI	CCWGG	1 cut(s)	966
Bst6I	CTCTTC	3 cut(s)	1113, 1440, 1698
BstACI	GRCGYC	2 cut(s)	222, 1369
BstBI	TTCGAA	3 cut(s)	523, 846, 1343
BstC8I	GCNNGC	2 cut(s)	1431, 1467
BstDEI	CTNAG	1 cut(s)	91
BstEII	GGTNACC	1 cut(s)	604
BstF5I	GGATG	2 cut(s)	488, 989
BstFNI	CGCG	8 cut(s)	190, 764, 1314, 1575, 1589, 1622, 1640, 1826
BstHHI	GCGC	4 cut(s)	143, 398, 764, 1744
BstMAI	GTCTC	5 cut(s)	81, 229, 359, 1669, 2440
BstMCI	CGRYCG	3 cut(s)	1200, 1355, 2028
BstMWI	GCNNNNNNNGC	5 cut(s)	270, 1439, 1832, 2216, 2303
BstNI	CCWGG	1 cut(s)	966
BstPAI	GACNNNNGTC	1 cut(s)	189
BstPI	GGTNACC	1 cut(s)	604
BstSCI	CCNGG	4 cut(s)	217, 865, 964, 2120
BstSFI	CTRYAG	1 cut(s)	1231
BstUI	CGCG	8 cut(s)	190, 764, 1314, 1575, 1589, 1622, 1640, 1826
BstV1I	GCAGC	1 cut(s)	2002
BstX2I	RGATCY	3 cut(s)	573, 1227, 2242
BstYI	RGATCY	3 cut(s)	573, 1227, 2242
BstZ17I	GTATAC	2 cut(s)	121, 269
Bsu15I	ATCGAT	1 cut(s)	851
Bsu36I	CCTNAGG	1 cut(s)	91
BsuI	GTATCC	1 cut(s)	182
BsuRI	GGCC	1 cut(s)	2341
BsuTUI	ATCGAT	1 cut(s)	851
BtgZI	GCGATG	3 cut(s)	34, 779, 2094
BtsCI	GGATG	2 cut(s)	488, 989
BtsI	GCAGTG	1 cut(s)	1875
BtsIMutI	CAGTG	1 cut(s)	1875
BveI	ACCTGC	2 cut(s)	608, 767
Cac8I	GCNNGC	2 cut(s)	1431, 1467
CfoI	GCGC	4 cut(s)	143, 398, 764, 1744
Cfr10I	RCCGGY	2 cut(s)	1329, 1350
Cfr13I	GGNCC	3 cut(s)	863, 968, 1967
ClaI	ATCGAT	1 cut(s)	851
CseI	GACGC	2 cut(s)	179, 211
CsiI	ACCWGGT	1 cut(s)	964
Csp6I	GTAC	3 cut(s)	411, 1044, 2232
CviAII	CATG	4 cut(s)	907, 1065, 1729, 2402
CviQI	GTAC	3 cut(s)	411, 1044, 2232
DdeI	CTNAG	1 cut(s)	91
Eam1104I	CTCTTC	3 cut(s)	1113, 1440, 1698
EarI	CTCTTC	3 cut(s)	1113, 1440, 1698
EciI	GGCGGA	1 cut(s)	816
Eco47I	GGWCC	3 cut(s)	863, 968, 1967
Eco81I	CCTNAGG	1 cut(s)	91
Eco88I	CYCGRG	2 cut(s)	362, 859
Eco91I	GGTNACC	1 cut(s)	604
EcoO109I	RGGNCCY	1 cut(s)	968
EcoO65I	GGTNACC	1 cut(s)	604
EcoRII	CCWGG	1 cut(s)	964
EcoT22I	ATGCAT	1 cut(s)	2313
Esp3I	CGTCTC	1 cut(s)	229
FaeI	CATG	4 cut(s)	910, 1068, 1732, 2405
FalI	AAGNNNNNCTT	2 cut(s)	1695, 1727
FaqI	GGGAC	1 cut(s)	2035
FatI	CATG	4 cut(s)	906, 1064, 1728, 2401
FauI	CCCGC	3 cut(s)	872, 1568, 2011
FbaI	TGATCA	1 cut(s)	1794
FblI	GTMKAC	2 cut(s)	120, 268
Fnu4HI	GCNGC	4 cut(s)	243, 511, 1836, 2016
FokI	GGATG	2 cut(s)	475, 976
Fsp4HI	GCNGC	4 cut(s)	243, 511, 1836, 2016
FspBI	CTAG	8 cut(s)	1493, 1679, 1839, 1935, 1976, 2093, 2267, 2415
FspI	TGCGCA	2 cut(s)	142, 397
GlaI	GCGC	4 cut(s)	142, 397, 763, 1743
GluI	GCNGC	4 cut(s)	243, 511, 1836, 2016
GsaI	CCCAGC	1 cut(s)	547
GsuI	CTGGAG	4 cut(s)	451, 690, 916, 1278
HaeIII	GGCC	1 cut(s)	2341
HgaI	GACGC	2 cut(s)	179, 211
HhaI	GCGC	4 cut(s)	143, 398, 764, 1744
Hin1I	GRCGYC	2 cut(s)	222, 1369
Hin1II	CATG	4 cut(s)	910, 1068, 1732, 2405
Hin6I	GCGC	4 cut(s)	141, 396, 762, 1742
HinP1I	GCGC	4 cut(s)	141, 396, 762, 1742
HincII	GTYRAC	4 cut(s)	158, 406, 1146, 2118
HindII	GTYRAC	4 cut(s)	158, 406, 1146, 2118
HindIII	AAGCTT	2 cut(s)	1167, 1709
HpaI	GTTAAC	1 cut(s)	406
Hpy188III	TCNNGA	8 cut(s)	364, 707, 775, 933, 1380, 1493, 1607, 2042
Hpy99I	CGWCG	5 cut(s)	380, 1165, 1306, 1423, 1778
HpyAV	CCTTC	4 cut(s)	299, 2162, 2267, 2321
HpyCH4IV	ACGT	7 cut(s)	29, 169, 204, 354, 1369, 1773, 2002
HpyCH4V	TGCA	4 cut(s)	666, 1223, 2185, 2311
HpyF10VI	GCNNNNNNNGC	5 cut(s)	270, 1439, 1832, 2216, 2303
HpyF3I	CTNAG	1 cut(s)	91
HpySE526I	ACGT	7 cut(s)	29, 169, 204, 354, 1369, 1773, 2002
Hsp92I	GRCGYC	2 cut(s)	222, 1369
Hsp92II	CATG	4 cut(s)	910, 1068, 1732, 2405
HspAI	GCGC	4 cut(s)	141, 396, 762, 1742
Ksp22I	TGATCA	1 cut(s)	1794
KspAI	GTTAAC	1 cut(s)	406
LmnI	GCTCC	8 cut(s)	131, 278, 709, 806, 1214, 1515, 2263, 2287
Lsp1109I	GCAGC	1 cut(s)	2002
LweI	GCATC	4 cut(s)	675, 756, 1822, 2269
MabI	ACCWGGT	1 cut(s)	964
MaeI	CTAG	8 cut(s)	1493, 1679, 1839, 1935, 1976, 2093, 2267, 2415
MaeII	ACGT	7 cut(s)	29, 169, 204, 354, 1369, 1773, 2002
MflI	RGATCY	3 cut(s)	573, 1227, 2242
MluI	ACGCGT	1 cut(s)	188
MlyI	GAGTC	4 cut(s)	361, 1096, 1105, 1913
MmeI	TCCRAC	7 cut(s)	153, 893, 1183, 1192, 2008, 2030, 2233
Mph1103I	ATGCAT	1 cut(s)	2313
MslI	CAYNNNNRTG	2 cut(s)	599, 633
MspR9I	CCNGG	4 cut(s)	219, 867, 966, 2122
Mva1269I	GAATGC	2 cut(s)	1389, 2326
MvaI	CCWGG	1 cut(s)	966
MvnI	CGCG	8 cut(s)	190, 764, 1314, 1575, 1589, 1622, 1640, 1826
MwoI	GCNNNNNNNGC	5 cut(s)	270, 1439, 1832, 2216, 2303
NciI	CCSGG	3 cut(s)	219, 867, 2122
NlaIII	CATG	4 cut(s)	910, 1068, 1732, 2405
NlaIV	GGNNCC	7 cut(s)	127, 439, 550, 864, 1968, 2205, 2244
NmuCI	GTSAC	7 cut(s)	25, 37, 43, 82, 205, 604, 826
NsbI	TGCGCA	2 cut(s)	142, 397
NsiI	ATGCAT	1 cut(s)	2313
NspV	TTCGAA	3 cut(s)	523, 846, 1343
OliI	CACNNNNGTG	1 cut(s)	633
PaeR7I	CTCGAG	1 cut(s)	362
PaqCI	CACCTGC	1 cut(s)	767
PcsI	WCGNNNNNNNCGW	6 cut(s)	360, 529, 675, 1298, 1637, 2207
PctI	GAATGC	2 cut(s)	1389, 2326
PflFI	GACNNNGTC	1 cut(s)	134
PkrI	GCNGC	4 cut(s)	244, 512, 1837, 2017
Ple19I	CGATCG	1 cut(s)	1200
PleI	GAGTC	4 cut(s)	361, 1095, 1104, 1913
PpsI	GAGTC	4 cut(s)	361, 1095, 1104, 1913
PpuMI	RGGWCCY	1 cut(s)	968
PshAI	GACNNNNGTC	1 cut(s)	189
PshBI	ATTAAT	1 cut(s)	1961
Psp1406I	AACGTT	1 cut(s)	354
Psp5II	RGGWCCY	1 cut(s)	968
Psp6I	CCWGG	1 cut(s)	964
PspEI	GGTNACC	1 cut(s)	604
PspFI	CCCAGC	1 cut(s)	543
PspGI	CCWGG	1 cut(s)	964
PspN4I	GGNNCC	7 cut(s)	127, 439, 550, 864, 1968, 2205, 2244
PspPI	GGNCC	3 cut(s)	863, 968, 1967
PspPPI	RGGWCCY	1 cut(s)	968
PsuI	RGATCY	3 cut(s)	573, 1227, 2242
PsyI	GACNNNGTC	1 cut(s)	134
PvuI	CGATCG	1 cut(s)	1200
RsaI	GTAC	3 cut(s)	412, 1045, 2233
RsaNI	GTAC	3 cut(s)	411, 1044, 2232
RseI	CAYNNNNRTG	2 cut(s)	599, 633
SatI	GCNGC	4 cut(s)	243, 511, 1836, 2016
Sau96I	GGNCC	3 cut(s)	863, 968, 1967
SchI	GAGTC	4 cut(s)	361, 1096, 1105, 1913
ScrFI	CCNGG	4 cut(s)	219, 867, 966, 2122
SexAI	ACCWGGT	1 cut(s)	964
SfaNI	GCATC	4 cut(s)	675, 756, 1822, 2269
SfcI	CTRYAG	1 cut(s)	1231
Sfr274I	CTCGAG	1 cut(s)	362
SfuI	TTCGAA	3 cut(s)	523, 846, 1343
SinI	GGWCC	3 cut(s)	863, 968, 1967
SlaI	CTCGAG	1 cut(s)	362
SmiMI	CAYNNNNRTG	2 cut(s)	599, 633
SmlI	CTYRAG	1 cut(s)	362
SmoI	CTYRAG	1 cut(s)	362
SpeI	ACTAGT	1 cut(s)	1678
SspMI	CTAG	8 cut(s)	1493, 1679, 1839, 1935, 1976, 2093, 2267, 2415
StyD4I	CCNGG	4 cut(s)	217, 865, 964, 2120
TaiI	ACGT	7 cut(s)	32, 172, 207, 357, 1372, 1776, 2005
TatI	WGTACW	1 cut(s)	2231
TauI	GCSGC	3 cut(s)	245, 513, 1838
TscAI	CASTG	1 cut(s)	1875
TseFI	GTSAC	7 cut(s)	25, 37, 43, 82, 205, 604, 826
TseI	GCWGC	1 cut(s)	2015
Tsp45I	GTSAC	7 cut(s)	25, 37, 43, 82, 205, 604, 826
TspDTI	ATGAA	9 cut(s)	17, 477, 1140, 1274, 1439, 1610, 1646, 1745, 1874
TspGWI	ACGGA	6 cut(s)	25, 364, 430, 845, 2084, 2366
TspRI	CASTG	1 cut(s)	1875
Tth111I	GACNNNGTC	1 cut(s)	134
VpaK11BI	GGWCC	3 cut(s)	863, 968, 1967
VspI	ATTAAT	1 cut(s)	1961
XapI	RAATTY	5 cut(s)	415, 655, 751, 925, 2365
XbaI	TCTAGA	1 cut(s)	1492
XhoI	CTCGAG	1 cut(s)	362
XmiI	GTMKAC	2 cut(s)	120, 268
XspI	CTAG	8 cut(s)	1493, 1679, 1839, 1935, 1976, 2093, 2267, 2415
ZraI	GACGTC	1 cut(s)	1370
Zsp2I	ATGCAT	1 cut(s)	2313

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.