Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0003366

Physical Location & Seq

Genomic Coordinates Reverse (-)

78395522 .. 78398112

Gene Structure 2591 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG457400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2304 bp

ATGACACTTGTATATGTCTTAATCTTCCTCACAACCTTCATATCTTCGCTGCCACCCAGCAGTGTGGTTGTCAATGGCCTAGGATTAGCATCCACCACTGCCATAGCATATGGCACGTCAACTATTTGTGGCGTTGTAGCTAACCACCAGACGCAGTTCATACAATGCTACCAAAACAACCGGACTATTTTAGTCCAACCCTCTGTCTCTTTTGAAGCAATATCTGGTGGGAAGACCTTCTTCTGTGGTCTCCGGTCCGGTGGCTTTAGCCTTCTTTGCTGGGACACCAGCTCTGTTAGCTTCAATCCTAGACGTATATACCACAGTGACGACGTAGCGTTGACTGATCTTACGGTTGGTGATGCTCAAGTTTGTGCCAGAGAGGTCAACTCTAGCACAGTCAGGTGCTGGAGAGGAGGGGCTTTGTTTCACTCACCAGGGGAGGCATTGAAGTTCAAGACAGTGACATCTGGAAGTGGGTTTACATGTGGGATTTTGATGAATGGTAGCAGAGTCCTCTGTTGGGGAAATGGTATTGGAGCTGAGATTCAAAAAGGGTTCGAGAATGTGTTAATGTCAAGCTTAATTGCTGGAGAGTCTCATGCTTGTGGCTTGAGGAAAAATGGAACTTTGGTCTGCAAAGGGAACAATGATTCCGGGCAATTGAATGTACCTTATGGGGCCAAGTTTTCAGGCCTTGCATTGGGAGCAAATTTTACTTGTGCTATAAGGCAAAGCAATGGCTATGTTGTATGCTGGGGTCACAGTGATGTTGTTGGAAATGTTTCGTTTGAGTCGATTGTTGCAGGTTTGGATTTTGTATGTGGACTAACAAGAGGTAATCTATCAGTGATTTGTTGGGGACCAGGATGGTCTAGTTCTGAAAATGATGTTACTTTGGGATCGATCATTCCGGGTCCATGTATACAAACTCCTTGTAGCAGCTGTGGTGTGTACCCAAATTCGGAGACTCTTTGTGGTGGGTCGGGGAATATATGCAACTCATGCCAGACCGAGCTTCCAGTTGCAGTGCCTTTGCTTCCAACAAGTCCACTGGAAAAAGGTTCTTCATCATCCATAGGAAAAAATAAGCTTTTGTTGGTTTTTGTAATAGTTGGATCAGTTGGGGCTTTTGCTGGACTTTGCACTGTTCTTTTCTGCTTATGGATTGGACTGTGCAGCTCTTGGTTCAACAACCGGGAGTCTGATGAGCAACTCACAAGTGCTGCTGACCCCAATGTAGGGGCTCTGGTTGAGATCCAAAACGTTCCTAATGCTCCATTTCAGCACTTTAGTAGTAGTTCATCATCAAAGCATGCAGACAAGACTGAAGAATTTGTATTAGCAGAGCTTTCTGCCGCCACTAAGCATTTCTCAACCCAAAACAAGATTGGTGCCGGGAGCTTTGGTATTGTATACAGAGGCAAGCTCTCTGATGGTCGCGAAGTGGCCATCAAGAGAGGAGATACTAGTACAAAAACCAAGAAATTCCAGGAGAAAGAAAGCGCGTTTGATTCTGAAGTAGCATTGCTGTCTCGGCTTCACCACAAGCATTTGGTGAAGCTAGTGGGATCGTGTGAAGATAAAGACGAGAGGCTTTTGGTTTACGAGTACATGAGTAATGGCTCGCTTCATGATCACTTGCACAACAAGAAAAATGTGGAGAAAAGTAGCAGCATTGTGAACTCTTGGAAAATGAGGATGAGAATAGCATTGGATGCTGCAAGGGGGATTGAGTATCTTCACACTTATGCAGTGCCGCCAATAATTCATCGAGACATCAAGTCCTCTAACATTCTCTTGGATGCAGACATGACTGCAAGAGTATCTGATTTCGGGCTGTCATTGTTGGGGCCGGCATCTGATCAAGAGGTACTGTCATCAAAGGCCGTTGGGACAGTAGGGTACATTGATCCAGAGTACTTTGTACTAAACGTTTTGACTGCAAAGAGCGATGTCTATGGCTTCGGAGTGGTGTTGTTGGAGCTTTTGACAGGGAAGAGGGCTGTTTTCAGTGACAGTGAAGAAGGAACAGGTCCAATTGGTGTTGTGGAATATGCAGGGCCAAGGATAATGGCAGGAGATCTGCAAAGCTTGTTGGATAAAAGGCTTGGGCAGCCGGAGCCAAATGAGGCCGAAGCAGTTCAGCTAGTAGCTAATACTGCTATGCATTGTCTGAGTTTAGAGGGGAAAGAAAGGCCTAGTATGACTGACATTGTTGCCAATTTGGAGAGAGCAATTGCCTTTTGTGAACAGGAACCTGTTAGCTTCTCTACCTCCGCAATTTCCCTTCCTTCACTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0042802 GO:0042803 GO:0046983

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase RCC1_2

Protein Analysis

767

Amino Acids

81.88

Weight (kDa)

5.97

Isoelectric Point (pI)

35.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RCC1_2	PF13540	197 - 221	2.7e-06	Regulator of chromosome condensation (RCC1) repeat
Pkinase	PF00069	459 - 741	3e-44	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	460 - 743	1.2e-44	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003366)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55950
fragaria_vesca	FvH4_3g38710 FvH4_7g24490
malus_domestica	MD00G1166500.v1.1 MD01G1153100.v1.1 MD03G1068800.v1.1 MD07G1222100.v1.1 MD11G1073300.v1.1
prunus_persica	Prupe.2G250300_v2.0.a1 Prupe.6G056600_v2.0.a1
pyrus_communis	pycom01g17070 pycom03g05510
rosa_chinensis	RchiOBHm_Chr1g0370251 RchiOBHm_Chr5g0065501 RchiOBHm_Chr5g0069861
rosa_laevigata	RLG00000027065 RLG00000036103
rosa_multiflora	Rmu_co8321277.1_g000001 Rmu_sc0000738.1_g000002 Rmu_sc0026893.1_g000001 Rmu_sc0037931.1_g000001
rosa_roxburghii	Rroxscaffold_1G00011190 Rroxscaffold_4G00286710 Rroxscaffold_4G00287300
rosa_rugosa	Rorug01G0355200 Rorug05G0400300
rosa_samantha	Rh1AG363800 Rh1BG326900 Rh1CG340200 Rh1DG357300 Rh5AG457400 Rh5BG476200 Rh5CG500000 Rh5DG488000
rosa_wichuraiana	Rw1G032010 Rw5G042700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	797
AccB1I	GGYRCC	1 cut(s)	1394
AccI	GTMKAC	2 cut(s)	925, 1416
AccII	CGCG	2 cut(s)	1443, 1508
AciI	CCGC	3 cut(s)	1359, 1760, 2280
AclI	AACGTT	2 cut(s)	1266, 1935
AclWI	GGATC	5 cut(s)	910, 1126, 1252, 1579, 1907
AcoI	YGGCCR	1 cut(s)	1449
AcsI	RAATTY	4 cut(s)	712, 961, 1334, 1487
AcuI	CTGAAG	2 cut(s)	1350, 1539
AfaI	GTAC	8 cut(s)	672, 956, 1474, 1613, 1875, 1907, 1922, 1929
AfiI	CCNNNNNNNGG	5 cut(s)	523, 703, 964, 1241, 1242
AflIII	ACRYGT	1 cut(s)	485
AgsI	TTSAA	7 cut(s)	215, 304, 451, 457, 551, 667, 1192
AhdI	GACNNNNNGTC	1 cut(s)	1783
AhlI	ACTAGT	1 cut(s)	1469
AjiI	CACGTC	1 cut(s)	117
AjnI	CCWGG	3 cut(s)	436, 865, 1491
AloI	GAACNNNNNNTCC	2 cut(s)	638, 670
Alw26I	GTCTC	6 cut(s)	211, 254, 603, 962, 1539, 1770
AlwI	GGATC	5 cut(s)	910, 1126, 1252, 1579, 1907
AlwNI	CAGNNNCTG	1 cut(s)	408
AoxI	GGCC	9 cut(s)	76, 681, 694, 1449, 1853, 1887, 2063, 2133, 2198
ApeKI	GCWGC	7 cut(s)	49, 942, 1179, 1226, 1674, 1721, 2116
ApoI	RAATTY	4 cut(s)	712, 961, 1334, 1487
Asp700I	GAANNNNTTC	3 cut(s)	236, 784, 2142
AspA2I	CCTAGG	1 cut(s)	79
AspLEI	GCGC	1 cut(s)	1508
AspS9I	GGNCC	7 cut(s)	255, 681, 863, 917, 1853, 2036, 2063
AsuC2I	CCSGG	4 cut(s)	658, 915, 1199, 1399
AsuHPI	GGTGA	4 cut(s)	371, 426, 1535, 1570
AvaII	GGWCC	4 cut(s)	255, 863, 917, 2036
AvrII	CCTAGG	1 cut(s)	79
BalI	TGGCCA	1 cut(s)	1451
BanI	GGYRCC	1 cut(s)	1394
BanII	GRGCYC	1 cut(s)	1249
BarI	GAAGNNNNNNTAC	2 cut(s)	466, 498
BbsI	GAAGAC	1 cut(s)	239
BbvI	GCAGC	7 cut(s)	36, 954, 1191, 1213, 1686, 1708, 2128
BccI	CCATC	3 cut(s)	864, 1430, 1460
BceAI	ACGGC	1 cut(s)	1874
BciT130I	CCWGG	3 cut(s)	438, 867, 1493
BclI	TGATCA	2 cut(s)	1636, 1864
BcnI	CCSGG	4 cut(s)	658, 915, 1199, 1399
BcoDI	GTCTC	6 cut(s)	211, 254, 603, 962, 1539, 1770
BcuI	ACTAGT	1 cut(s)	1469
BfaI	CTAG	8 cut(s)	80, 309, 393, 876, 1470, 1565, 2150, 2202
BfuAI	ACCTGC	1 cut(s)	797
BglII	AGATCT	1 cut(s)	2083
BisI	GCNGC	9 cut(s)	50, 943, 1180, 1227, 1359, 1675, 1722, 1760, 2117
BlnI	CCTAGG	1 cut(s)	79
BlsI	GCNGC	9 cut(s)	51, 944, 1181, 1228, 1360, 1676, 1723, 1761, 2118
BmcAI	AGTACT	1 cut(s)	1922
Bme1390I	CCNGG	7 cut(s)	438, 658, 867, 915, 1199, 1399, 1493
Bme18I	GGWCC	4 cut(s)	255, 863, 917, 2036
BmeRI	GACNNNNNGTC	1 cut(s)	1783
BmgBI	CACGTC	1 cut(s)	117
BmgT120I	GGNCC	7 cut(s)	255, 681, 863, 917, 1853, 2036, 2063
BmiI	GGNNCC	7 cut(s)	682, 864, 918, 1396, 1854, 2124, 2259
BmrFI	CCNGG	7 cut(s)	438, 658, 867, 915, 1199, 1399, 1493
BmsI	GCATC	5 cut(s)	98, 352, 1708, 1795, 1868
BpiI	GAAGAC	1 cut(s)	239
BplI	GAGNNNNNCTC	4 cut(s)	374, 406, 1413, 1445
BpmI	CTGGAG	2 cut(s)	430, 612
BpuEI	CTTGAG	2 cut(s)	351, 634
BpuMI	CCSGG	4 cut(s)	658, 915, 1199, 1399
Bsa29I	ATCGAT	1 cut(s)	905
BsaBI	GATNNNNATC	1 cut(s)	88
BsaI	GGTCTC	1 cut(s)	254
BsaJI	CCNNGG	3 cut(s)	79, 437, 2066
BsaWI	WCCGGW	3 cut(s)	180, 252, 257
BsaXI	ACNNNNNCTCC	2 cut(s)	1393, 1423
Bsc4I	CCNNNNNNNGG	5 cut(s)	523, 703, 964, 1241, 1242
Bse118I	RCCGGY	1 cut(s)	1855
Bse1I	ACTGG	2 cut(s)	1022, 1059
Bse3DI	GCAATG	2 cut(s)	745, 1526
Bse8I	GATNNNNATC	1 cut(s)	88
BseBI	CCWGG	3 cut(s)	438, 867, 1493
BseCI	ATCGAT	1 cut(s)	905
BseDI	CCNNGG	3 cut(s)	79, 437, 2066
BseGI	GGATG	6 cut(s)	89, 875, 1073, 1707, 1723, 1810
BseJI	GATNNNNATC	1 cut(s)	88
BseLI	CCNNNNNNNGG	5 cut(s)	523, 703, 964, 1241, 1242
BseMI	GCAATG	2 cut(s)	745, 1526
BseMII	CTCAG	2 cut(s)	534, 2168
BseNI	ACTGG	2 cut(s)	1022, 1059
BseRI	GAGGAG	2 cut(s)	429, 1476
BseXI	GCAGC	7 cut(s)	36, 954, 1191, 1213, 1686, 1708, 2128
BseYI	CCCAGC	3 cut(s)	56, 279, 756
BsgI	GTGCAG	1 cut(s)	1198
Bsh1236I	CGCG	2 cut(s)	1443, 1508
BshFI	GGCC	9 cut(s)	78, 683, 696, 1451, 1855, 1889, 2065, 2135, 2200
BshNI	GGYRCC	1 cut(s)	1394
BshVI	ATCGAT	1 cut(s)	905
BsiSI	CCGG	9 cut(s)	181, 253, 258, 657, 914, 1198, 1398, 1856, 2120
BslFI	GGGAC	3 cut(s)	296, 876, 1909
BslI	CCNNNNNNNGG	5 cut(s)	523, 703, 964, 1241, 1242
BsmAI	GTCTC	6 cut(s)	211, 254, 603, 962, 1539, 1770
BsmFI	GGGAC	3 cut(s)	296, 876, 1909
BsnI	GGCC	9 cut(s)	78, 683, 696, 1451, 1855, 1889, 2065, 2135, 2200
Bso31I	GGTCTC	1 cut(s)	254
Bsp1286I	GDGCHC	1 cut(s)	1249
Bsp68I	TCGCGA	1 cut(s)	1443
BspACI	CCGC	3 cut(s)	1359, 1760, 2280
BspANI	GGCC	9 cut(s)	78, 683, 696, 1451, 1855, 1889, 2065, 2135, 2200
BspCNI	CTCAG	2 cut(s)	535, 2169
BspDI	ATCGAT	1 cut(s)	905
BspFNI	CGCG	2 cut(s)	1443, 1508
BspHI	TCATGA	1 cut(s)	1633
BspLI	GGNNCC	7 cut(s)	682, 864, 918, 1396, 1854, 2124, 2259
BspMI	ACCTGC	1 cut(s)	797
BspPI	GGATC	5 cut(s)	910, 1126, 1252, 1579, 1907
BspT107I	GGYRCC	1 cut(s)	1394
BspTNI	GGTCTC	1 cut(s)	254
BsrDI	GCAATG	2 cut(s)	745, 1526
BsrFI	RCCGGY	1 cut(s)	1855
BsrI	ACTGG	2 cut(s)	1022, 1059
BssAI	RCCGGY	1 cut(s)	1855
BssECI	CCNNGG	3 cut(s)	79, 437, 2066
BssNAI	GTATAC	2 cut(s)	926, 1417
BssT1I	CCWWGG	2 cut(s)	79, 2066
Bst1107I	GTATAC	2 cut(s)	926, 1417
Bst2UI	CCWGG	3 cut(s)	438, 867, 1493
Bst6I	CTCTTC	1 cut(s)	1994
BstAPI	GCANNNNNTGC	2 cut(s)	1005, 1718
BstC8I	GCNNGC	4 cut(s)	1317, 1427, 1628, 1857
BstDEI	CTNAG	3 cut(s)	543, 1365, 2177
BstF5I	GGATG	6 cut(s)	89, 875, 1073, 1707, 1723, 1810
BstFNI	CGCG	2 cut(s)	1443, 1508
BstHHI	GCGC	1 cut(s)	1508
BstMAI	GTCTC	6 cut(s)	211, 254, 603, 962, 1539, 1770
BstMWI	GCNNNNNNNGC	9 cut(s)	276, 297, 707, 1005, 1537, 1718, 2116, 2122, 2162
BstNI	CCWGG	3 cut(s)	438, 867, 1493
BstNSI	RCATGY	2 cut(s)	489, 1319
BstSCI	CCNGG	7 cut(s)	436, 656, 865, 913, 1197, 1397, 1491
BstUI	CGCG	2 cut(s)	1443, 1508
BstV1I	GCAGC	7 cut(s)	36, 954, 1191, 1213, 1686, 1708, 2128
BstV2I	GAAGAC	1 cut(s)	239
BstX2I	RGATCY	2 cut(s)	1257, 2083
BstXI	CCANNNNNNTGG	1 cut(s)	64
BstYI	RGATCY	2 cut(s)	1257, 2083
BstZ17I	GTATAC	2 cut(s)	926, 1417
Bsu15I	ATCGAT	1 cut(s)	905
BsuRI	GGCC	9 cut(s)	78, 683, 696, 1451, 1855, 1889, 2065, 2135, 2200
BsuTUI	ATCGAT	1 cut(s)	905
BtgZI	GCGATG	1 cut(s)	1968
BtrI	CACGTC	1 cut(s)	117
BtsCI	GGATG	6 cut(s)	89, 875, 1073, 1707, 1723, 1810
BtsI	GCAGTG	4 cut(s)	67, 96, 1035, 1761
BtuMI	TCGCGA	1 cut(s)	1443
BveI	ACCTGC	1 cut(s)	797
Cac8I	GCNNGC	4 cut(s)	1317, 1427, 1628, 1857
CaiI	CAGNNNCTG	1 cut(s)	408
CciI	TCATGA	1 cut(s)	1633
CfoI	GCGC	1 cut(s)	1508
Cfr10I	RCCGGY	1 cut(s)	1855
Cfr13I	GGNCC	7 cut(s)	255, 681, 863, 917, 1853, 2036, 2063
ClaI	ATCGAT	1 cut(s)	905
CpoI	CGGWCCG	1 cut(s)	255
CseI	GACGC	1 cut(s)	160
Csp6I	GTAC	8 cut(s)	671, 955, 1473, 1612, 1874, 1906, 1921, 1928
CspI	CGGWCCG	1 cut(s)	255
CviAII	CATG	8 cut(s)	486, 602, 921, 1005, 1316, 1615, 1634, 1813
CviQI	GTAC	8 cut(s)	671, 955, 1473, 1612, 1874, 1906, 1921, 1928
DdeI	CTNAG	3 cut(s)	543, 1365, 2177
DriI	GACNNNNNGTC	1 cut(s)	1783
EaeI	YGGCCR	1 cut(s)	1449
Eam1104I	CTCTTC	1 cut(s)	1994
Eam1105I	GACNNNNNGTC	1 cut(s)	1783
EarI	CTCTTC	1 cut(s)	1994
Eco130I	CCWWGG	2 cut(s)	79, 2066
Eco147I	AGGCCT	2 cut(s)	696, 2200
Eco24I	GRGCYC	1 cut(s)	1249
Eco31I	GGTCTC	1 cut(s)	254
Eco47I	GGWCC	4 cut(s)	255, 863, 917, 2036
Eco57I	CTGAAG	2 cut(s)	1350, 1539
EcoRII	CCWGG	3 cut(s)	436, 865, 1491
EcoT14I	CCWWGG	2 cut(s)	79, 2066
EcoT22I	ATGCAT	1 cut(s)	2172
EcoT38I	GRGCYC	1 cut(s)	1249
ErhI	CCWWGG	2 cut(s)	79, 2066
FaeI	CATG	8 cut(s)	489, 605, 924, 1008, 1319, 1618, 1637, 1816
FalI	AAGNNNNNCTT	2 cut(s)	224, 256
FaqI	GGGAC	3 cut(s)	296, 876, 1909
FatI	CATG	8 cut(s)	485, 601, 920, 1004, 1315, 1614, 1633, 1812
FauNDI	CATATG	1 cut(s)	109
FbaI	TGATCA	2 cut(s)	1636, 1864
FblI	GTMKAC	2 cut(s)	925, 1416
Fnu4HI	GCNGC	9 cut(s)	50, 943, 1180, 1227, 1359, 1675, 1722, 1760, 2117
FokI	GGATG	6 cut(s)	76, 882, 1060, 1714, 1730, 1817
FriOI	GRGCYC	1 cut(s)	1249
Fsp4HI	GCNGC	9 cut(s)	50, 943, 1180, 1227, 1359, 1675, 1722, 1760, 2117
FspBI	CTAG	8 cut(s)	80, 309, 393, 876, 1470, 1565, 2150, 2202
GlaI	GCGC	1 cut(s)	1507
GluI	GCNGC	9 cut(s)	50, 943, 1180, 1227, 1359, 1675, 1722, 1760, 2117
GsaI	CCCAGC	3 cut(s)	60, 283, 760
GsuI	CTGGAG	2 cut(s)	430, 612
HaeIII	GGCC	9 cut(s)	78, 683, 696, 1451, 1855, 1889, 2065, 2135, 2200
HapII	CCGG	9 cut(s)	181, 253, 258, 657, 914, 1198, 1398, 1856, 2120
HgaI	GACGC	1 cut(s)	160
HhaI	GCGC	1 cut(s)	1508
Hin1II	CATG	8 cut(s)	489, 605, 924, 1008, 1319, 1618, 1637, 1816
Hin6I	GCGC	1 cut(s)	1506
HinP1I	GCGC	1 cut(s)	1506
HincII	GTYRAC	3 cut(s)	120, 342, 388
HindII	GTYRAC	3 cut(s)	120, 342, 388
HindIII	AAGCTT	3 cut(s)	580, 1091, 2092
HinfI	GANTC	8 cut(s)	513, 547, 596, 653, 794, 970, 1202, 1514
HpaII	CCGG	9 cut(s)	181, 253, 258, 657, 914, 1198, 1398, 1856, 2120
HphI	GGTGA	4 cut(s)	371, 426, 1535, 1570
Hpy188I	TCNGA	9 cut(s)	883, 967, 1207, 1435, 1519, 1831, 1864, 1970, 2178
Hpy188III	TCNNGA	9 cut(s)	457, 471, 562, 1442, 1456, 1634, 1775, 1868, 1916
Hpy99I	CGWCG	1 cut(s)	335
HpyAV	CCTTC	6 cut(s)	46, 247, 281, 2021, 2300, 2304
HpyCH4IV	ACGT	5 cut(s)	116, 313, 333, 1266, 1935
HpyF10VI	GCNNNNNNNGC	9 cut(s)	276, 297, 707, 1005, 1537, 1718, 2116, 2122, 2162
HpyF3I	CTNAG	3 cut(s)	543, 1365, 2177
HpySE526I	ACGT	5 cut(s)	116, 313, 333, 1266, 1935
Hsp92II	CATG	8 cut(s)	489, 605, 924, 1008, 1319, 1618, 1637, 1816
HspAI	GCGC	1 cut(s)	1506
KroI	GCCGGC	1 cut(s)	1855
KroNI	GCCGGC	1 cut(s)	1857
Ksp22I	TGATCA	2 cut(s)	1636, 1864
LmnI	GCTCC	6 cut(s)	539, 707, 1282, 1401, 1984, 2122
Lsp1109I	GCAGC	7 cut(s)	36, 954, 1191, 1213, 1686, 1708, 2128
LweI	GCATC	5 cut(s)	98, 352, 1708, 1795, 1868
MaeI	CTAG	8 cut(s)	80, 309, 393, 876, 1470, 1565, 2150, 2202
MaeII	ACGT	5 cut(s)	116, 313, 333, 1266, 1935
MaeIII	GTNAC	5 cut(s)	326, 463, 761, 892, 2015
MfeI	CAATTG	3 cut(s)	662, 2040, 2238
MflI	RGATCY	2 cut(s)	1257, 2083
MhlI	GDGCHC	1 cut(s)	1249
MlsI	TGGCCA	1 cut(s)	1451
MluNI	TGGCCA	1 cut(s)	1451
MlyI	GAGTC	5 cut(s)	522, 605, 803, 964, 1211
MmeI	TCCRAC	6 cut(s)	220, 757, 1067, 1096, 1962, 2079
Mox20I	TGGCCA	1 cut(s)	1451
Mph1103I	ATGCAT	1 cut(s)	2172
MroNI	GCCGGC	1 cut(s)	1855
MroXI	GAANNNNTTC	3 cut(s)	236, 784, 2142
MscI	TGGCCA	1 cut(s)	1451
MseI	TTAA	3 cut(s)	20, 572, 584
MslI	CAYNNNNRTG	3 cut(s)	606, 768, 1749
Msp20I	TGGCCA	1 cut(s)	1451
MspA1I	CMGCKG	1 cut(s)	945
MspI	CCGG	9 cut(s)	181, 253, 258, 657, 914, 1198, 1398, 1856, 2120
MspR9I	CCNGG	7 cut(s)	438, 658, 867, 915, 1199, 1399, 1493
MunI	CAATTG	3 cut(s)	662, 2040, 2238
MvaI	CCWGG	3 cut(s)	438, 867, 1493
MvnI	CGCG	2 cut(s)	1443, 1508
MwoI	GCNNNNNNNGC	9 cut(s)	276, 297, 707, 1005, 1537, 1718, 2116, 2122, 2162
NaeI	GCCGGC	1 cut(s)	1857
NciI	CCSGG	4 cut(s)	658, 915, 1199, 1399
NdeI	CATATG	1 cut(s)	109
NgoMIV	GCCGGC	1 cut(s)	1855
NlaIII	CATG	8 cut(s)	489, 605, 924, 1008, 1319, 1618, 1637, 1816
NlaIV	GGNNCC	7 cut(s)	682, 864, 918, 1396, 1854, 2124, 2259
NmeAIII	GCCGAG	1 cut(s)	1516
NmuCI	GTSAC	4 cut(s)	326, 463, 761, 2015
NruI	TCGCGA	1 cut(s)	1443
NsiI	ATGCAT	1 cut(s)	2172
NspI	RCATGY	2 cut(s)	489, 1319
PaeI	GCATGC	1 cut(s)	1319
PagI	TCATGA	1 cut(s)	1633
PceI	AGGCCT	2 cut(s)	696, 2200
PciI	ACATGT	1 cut(s)	485
PcsI	WCGNNNNNNNCGW	1 cut(s)	794
PdiI	GCCGGC	1 cut(s)	1857
PdmI	GAANNNNTTC	3 cut(s)	236, 784, 2142
PfeI	GAWTC	3 cut(s)	547, 653, 1514
PfoI	TCCNGGA	1 cut(s)	1491
PkrI	GCNGC	9 cut(s)	51, 944, 1181, 1228, 1360, 1676, 1723, 1761, 2118
PleI	GAGTC	5 cut(s)	521, 604, 802, 964, 1210
PpsI	GAGTC	5 cut(s)	521, 604, 802, 964, 1210
PscI	ACATGT	1 cut(s)	485
Psp1406I	AACGTT	2 cut(s)	1266, 1935
Psp6I	CCWGG	3 cut(s)	436, 865, 1491
PspFI	CCCAGC	3 cut(s)	56, 279, 756
PspGI	CCWGG	3 cut(s)	436, 865, 1491
PspN4I	GGNNCC	7 cut(s)	682, 864, 918, 1396, 1854, 2124, 2259
PspPI	GGNCC	7 cut(s)	255, 681, 863, 917, 1853, 2036, 2063
PstNI	CAGNNNCTG	1 cut(s)	408
PsuI	RGATCY	2 cut(s)	1257, 2083
PvuII	CAGCTG	1 cut(s)	945
RruI	TCGCGA	1 cut(s)	1443
RsaI	GTAC	8 cut(s)	672, 956, 1474, 1613, 1875, 1907, 1922, 1929
RsaNI	GTAC	8 cut(s)	671, 955, 1473, 1612, 1874, 1906, 1921, 1928
RseI	CAYNNNNRTG	3 cut(s)	606, 768, 1749
Rsr2I	CGGWCCG	1 cut(s)	255
RsrII	CGGWCCG	1 cut(s)	255
SaqAI	TTAA	3 cut(s)	20, 572, 584
SatI	GCNGC	9 cut(s)	50, 943, 1180, 1227, 1359, 1675, 1722, 1760, 2117
Sau96I	GGNCC	7 cut(s)	255, 681, 863, 917, 1853, 2036, 2063
ScaI	AGTACT	1 cut(s)	1922
SchI	GAGTC	5 cut(s)	522, 605, 803, 964, 1211
ScrFI	CCNGG	7 cut(s)	438, 658, 867, 915, 1199, 1399, 1493
SduI	GDGCHC	1 cut(s)	1249
SfaNI	GCATC	5 cut(s)	98, 352, 1708, 1795, 1868
SinI	GGWCC	4 cut(s)	255, 863, 917, 2036
SmiMI	CAYNNNNRTG	3 cut(s)	606, 768, 1749
SmlI	CTYRAG	2 cut(s)	366, 613
SmoI	CTYRAG	2 cut(s)	366, 613
SpeI	ACTAGT	1 cut(s)	1469
SphI	GCATGC	1 cut(s)	1319
SseBI	AGGCCT	2 cut(s)	696, 2200
SsiI	CCGC	3 cut(s)	1359, 1760, 2280
SspMI	CTAG	8 cut(s)	80, 309, 393, 876, 1470, 1565, 2150, 2202
StuI	AGGCCT	2 cut(s)	696, 2200
StyD4I	CCNGG	7 cut(s)	436, 656, 865, 913, 1197, 1397, 1491
StyI	CCWWGG	2 cut(s)	79, 2066
TaiI	ACGT	5 cut(s)	119, 316, 336, 1269, 1938
TaqI	TCGA	4 cut(s)	561, 797, 905, 1774
TaqII	GACCGA	1 cut(s)	1028
TatI	WGTACW	4 cut(s)	1472, 1611, 1920, 1927
TauI	GCSGC	2 cut(s)	1361, 1762
TfiI	GAWTC	3 cut(s)	547, 653, 1514
Tru1I	TTAA	3 cut(s)	20, 572, 584
Tru9I	TTAA	3 cut(s)	20, 572, 584
TseFI	GTSAC	4 cut(s)	326, 463, 761, 2015
TseI	GCWGC	7 cut(s)	49, 942, 1179, 1226, 1674, 1721, 2116
Tsp45I	GTSAC	4 cut(s)	326, 463, 761, 2015
TspDTI	ATGAA	7 cut(s)	28, 148, 515, 1059, 1293, 1622, 1760
VpaK11BI	GGWCC	4 cut(s)	255, 863, 917, 2036
XapI	RAATTY	4 cut(s)	712, 961, 1334, 1487
XceI	RCATGY	2 cut(s)	489, 1319
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1388
XmaJI	CCTAGG	1 cut(s)	79
XmiI	GTMKAC	2 cut(s)	925, 1416
XmnI	GAANNNNTTC	3 cut(s)	236, 784, 2142
XspI	CTAG	8 cut(s)	80, 309, 393, 876, 1470, 1565, 2150, 2202
ZrmI	AGTACT	1 cut(s)	1922
Zsp2I	ATGCAT	1 cut(s)	2172

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.