Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0003366

Physical Location & Seq

Genomic Coordinates Reverse (-)

32990898 .. 32993162

Gene Structure 2265 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g38710.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2265 bp

ATGACACTTGTATTTGTCTTCATCTTCTTCACAGCCTTCATCTCTCTGCTGATACCCAACAGTGTGGTTGTCAATGGCCTTGGATTAGCTTCCACCACTGCCATTGTATATGGCACTTCAACTATTTGTGGCATTGTAGCTAACCACCAAACGCAGTTCATACAATGCTACCAAAACAACCGGACTATTTTAGTCCAACCCTATGTCTCTTTTGAAGCAATATCTGGTGGGAAGACCTTCTTTTGTGGTCTCCGGTCCGGTGGCCTTAGCCTTCTCTGCTGGGACACCAGCTCAGTTAGCTTCAATCCTAGACGTATATACCACAGTGATGACGTAACGTTGACTAATCTAACGGTTGGTGATGCTCAAGTTTGTGCCAGAGAGGTCAACTCCAGCATAGTCAGATGCTGGAGAGGAGGGGATTTGTTTCACTCACCTGGGGAGGCATTGAAGTTCAAGACAGTCACATCTGGAAGTGGCTTCACATGTGGGATTTTGATGAATGGTAGCAGAGTCCTCTGCTGGGGTAATGGTGTTGGAGCTGAGATTCAGAAAGGGTTTGAAGATATGTCAATGTCAAGCTTGATTGCAGGAGAGTCTCATGCTTGCGGCCTACGGAAAAATGGAACTTTGGTCTGCAAAGGGAACAACGATTCCGGGCAATTGAATGTACCTTATGGTGCTTCCGTTTTCAAGTTTTCAGGCCTTGCATTGGGAGCAAACTTTACTTGTGCTATAAGGCAAAGCAGTGGTTATGCTGTATGCTGGGGTCATAGTGATGTTGTTGGAACTGTTTCATTTGAGTCGATTGTTGCAGGTTTGGATTTTGTATGTGGACTAACAAGAAGTAATCTATCAGTGATTTGTTGGGGACCAGGATGGTCTAGTTCTGAAAATCATGTTACTTTGGGATCGATCATTCCAGGTCCATGTGTACAAACACCATGTCGCAGCTGTGGTGTGTACCCAAATTCGGAGACTCTTTGTGGTGGGTCGAGGCAGATATGCAACTCATGCCAGACCGAGCTTCCAGTTGCAGTGCCTTTGCTTCCAACAAACCCACCGGAAAAAGGTTCTTCATCATCCATAGGAAGAAATAAGCTTTTGTTGACATTTGTGATAGTTGGATCAATAGGGACTTTTGCTGGAGTTTGCACTATTATGTTCTGCCTATGGATTAGACTATGCAGCTTTTGGTCCAACAATCCGAAGACTGAGCAACTCAAAAGTGCTGCTGACCGCAATGTAGGTGCTCCGGTTGAGAACCAAAATGTTCCTAGTGCTCTGAGAAGTAGTTCATCATCAAAGCATACAGACAAGACTGAAGAATTTGTACTAGCAGAGCTTTCTGCTGCCACTAAGCATTTTTCAACCCAAAACAAGATTGGTGCTGGGAGCTTTGGTATTGTATACAGAGGCAAGCTCTCCGATGGTCGTGAAGTGGCCATCAAGAGAGGAGATACTAGTACAAAAACGAAGAAATTCCAGGAGAAAGAAAGTGCATTTGATTCCGAACTAGCATTGCTGTCTCGGCTTCACCACAAGCATCTGGTGAAGTTAGTGGGATCATGTGAAGATAAAGATGACAGGCTTTTGGTTTACGAGTACATGAGCAACGGTTCACTTCATGATCACTTGCATAACAAGAAGAATGTGGAGAAAAGTAGCAGCATTGTAAATTCTTGGGAAATGAGGATGAGAATAGCATTGGATGCTGCAAGGGGGATTGAGTATCTTCACACTTATGCGGTGCCTCCAATAATTCACCGAGACATCAAGTCCTCTAACATTCTGTTGGATTCGGACATGACAGCAAGAGTATCCGATTTCGGGCTGTCACTGTTGGGGCCTGCATCTGATCAAGAGATCATGTCATCAAAGGCAGTTGGGACAATAGGTTACATTGATCCAGAGTACTTTGTACTAAACGTTTTGACAGCAAAGAGCGATGTCTATGGCTTCGGAGTGGTGTTGTTGGAGCTTTTGACAGGAAAGAGGGCAGTTTTCAATGACAGTGAAGAAGGAACAGGTCCAATGGGTATGGTGGAATATGCAGGGCCAAGGATAATGGCAGGAGAGCTGCAAAGCTTGCTGGATAAGAGGGTTGGACAGCCGGAACCAAACGAGGCCGAAGCAGTTCAGCTGGTGGCTTATACTGCCATGCATTGTGTGAATTTAGAGGGAAAAGAAAGGCCTAGTATGATTGACATTGTTGCCAATTTGGAGAGAGCAATTGCTCTTTGTGAACAGGAACCTCTTAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0042802 GO:0042803 GO:0046983

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase RCC1_2

Protein Analysis

755

Amino Acids

81.35

Weight (kDa)

6.51

Isoelectric Point (pI)

36.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RCC1_2	PF13540	197 - 221	1.9e-06	Regulator of chromosome condensation (RCC1) repeat
Pkinase	PF00069	457 - 734	8.2e-44	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	458 - 741	3.3e-44	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003366)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55950
fragaria_vesca	FvH4_3g38710 FvH4_7g24490
malus_domestica	MD00G1166500.v1.1 MD01G1153100.v1.1 MD03G1068800.v1.1 MD07G1222100.v1.1 MD11G1073300.v1.1
prunus_persica	Prupe.2G250300_v2.0.a1 Prupe.6G056600_v2.0.a1
pyrus_communis	pycom01g17070 pycom03g05510
rosa_chinensis	RchiOBHm_Chr1g0370251 RchiOBHm_Chr5g0065501 RchiOBHm_Chr5g0069861
rosa_laevigata	RLG00000027065 RLG00000036103
rosa_multiflora	Rmu_co8321277.1_g000001 Rmu_sc0000738.1_g000002 Rmu_sc0026893.1_g000001 Rmu_sc0037931.1_g000001
rosa_roxburghii	Rroxscaffold_1G00011190 Rroxscaffold_4G00286710 Rroxscaffold_4G00287300
rosa_rugosa	Rorug01G0355200 Rorug05G0400300
rosa_samantha	Rh1AG363800 Rh1BG326900 Rh1CG340200 Rh1DG357300 Rh5AG457400 Rh5BG476200 Rh5CG500000 Rh5DG488000
rosa_wichuraiana	Rw1G032010 Rw5G042700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	806
AccB1I	GGYRCC	1 cut(s)	1750
AccI	GTMKAC	1 cut(s)	1410
AciI	CCGC	3 cut(s)	609, 1240, 1748
AclI	AACGTT	2 cut(s)	338, 1929
AclWI	GGATC	4 cut(s)	919, 1135, 1573, 1901
AcoI	YGGCCR	1 cut(s)	1443
AcsI	RAATTY	5 cut(s)	970, 1328, 1481, 1678, 2173
AcuI	CTGAAG	1 cut(s)	1344
AfaI	GTAC	8 cut(s)	672, 936, 965, 1335, 1468, 1607, 1916, 1923
AfiI	CCNNNNNNNGG	5 cut(s)	523, 712, 973, 1070, 1830
AflIII	ACRYGT	1 cut(s)	485
AhdI	GACNNNNNGTC	1 cut(s)	1777
AhlI	ACTAGT	1 cut(s)	1463
AjnI	CCWGG	4 cut(s)	436, 874, 922, 1485
AloI	GAACNNNNNNTCC	2 cut(s)	638, 670
Alw21I	GWGCWC	2 cut(s)	1255, 1285
Alw26I	GTCTC	6 cut(s)	211, 254, 603, 971, 1533, 1764
AlwI	GGATC	4 cut(s)	919, 1135, 1573, 1901
AlwNI	CAGNNNCTG	1 cut(s)	408
AoxI	GGCC	9 cut(s)	76, 262, 610, 703, 1443, 1847, 2057, 2127, 2192
ApeKI	GCWGC	7 cut(s)	951, 1188, 1232, 1352, 1668, 1715, 2080
ApoI	RAATTY	5 cut(s)	970, 1328, 1481, 1678, 2173
ArsI	GACNNNNNNTTYG	2 cut(s)	931, 963
Asp700I	GAANNNNTTC	5 cut(s)	236, 793, 1294, 1481, 2136
AspS9I	GGNCC	7 cut(s)	255, 872, 926, 1197, 1847, 2030, 2057
AsuC2I	CCSGG	1 cut(s)	658
AsuHPI	GGTGA	5 cut(s)	371, 426, 1529, 1564, 1757
AvaII	GGWCC	5 cut(s)	255, 872, 926, 1197, 2030
BalI	TGGCCA	1 cut(s)	1445
BanI	GGYRCC	1 cut(s)	1750
BarI	GAAGNNNNNNTAC	2 cut(s)	1317, 1349
BbsI	GAAGAC	3 cut(s)	10, 239, 1217
Bbv12I	GWGCWC	2 cut(s)	1255, 1285
BbvI	GCAGC	7 cut(s)	963, 1200, 1219, 1339, 1680, 1702, 2067
BccI	CCATC	3 cut(s)	873, 1424, 1454
BciT130I	CCWGG	4 cut(s)	438, 876, 924, 1487
BciVI	GTATCC	1 cut(s)	1831
BclI	TGATCA	2 cut(s)	1630, 1858
BcnI	CCSGG	1 cut(s)	658
BcoDI	GTCTC	6 cut(s)	211, 254, 603, 971, 1533, 1764
BcuI	ACTAGT	1 cut(s)	1463
BfaI	CTAG	8 cut(s)	309, 885, 1278, 1337, 1464, 1517, 2196, 2263
BfuAI	ACCTGC	1 cut(s)	806
BfuI	GTATCC	1 cut(s)	1831
BisI	GCNGC	8 cut(s)	610, 952, 1189, 1233, 1353, 1669, 1716, 2081
BlsI	GCNGC	8 cut(s)	611, 953, 1190, 1234, 1354, 1670, 1717, 2082
BmcAI	AGTACT	1 cut(s)	1916
Bme1390I	CCNGG	5 cut(s)	438, 658, 876, 924, 1487
Bme18I	GGWCC	5 cut(s)	255, 872, 926, 1197, 2030
BmeRI	GACNNNNNGTC	1 cut(s)	1777
BmgT120I	GGNCC	7 cut(s)	255, 872, 926, 1197, 1847, 2030, 2057
BmiI	GGNNCC	5 cut(s)	873, 1752, 1848, 2118, 2253
BmrFI	CCNGG	5 cut(s)	438, 658, 876, 924, 1487
BmsI	GCATC	5 cut(s)	352, 395, 1555, 1702, 1862
BpiI	GAAGAC	3 cut(s)	10, 239, 1217
BplI	GAGNNNNNCTC	4 cut(s)	374, 406, 1407, 1439
BpmI	CTGGAG	3 cut(s)	376, 430, 1167
Bpu10I	CCTNAGC	1 cut(s)	266
BpuEI	CTTGAG	1 cut(s)	351
BpuMI	CCSGG	1 cut(s)	658
Bsa29I	ATCGAT	1 cut(s)	914
BsaI	GGTCTC	1 cut(s)	254
BsaJI	CCNNGG	3 cut(s)	79, 437, 2060
BsaWI	WCCGGW	5 cut(s)	180, 252, 257, 1063, 1255
BsaXI	ACNNNNNCTCC	2 cut(s)	1387, 1417
Bsc4I	CCNNNNNNNGG	5 cut(s)	523, 712, 973, 1070, 1830
Bse1I	ACTGG	1 cut(s)	1031
Bse3DI	GCAATG	2 cut(s)	1249, 1520
BseBI	CCWGG	4 cut(s)	438, 876, 924, 1487
BseCI	ATCGAT	1 cut(s)	914
BseDI	CCNNGG	3 cut(s)	79, 437, 2060
BseGI	GGATG	4 cut(s)	884, 1082, 1701, 1717
BseLI	CCNNNNNNNGG	5 cut(s)	523, 712, 973, 1070, 1830
BseMI	GCAATG	2 cut(s)	1249, 1520
BseMII	CTCAG	4 cut(s)	306, 534, 1206, 1277
BseNI	ACTGG	1 cut(s)	1031
BseRI	GAGGAG	2 cut(s)	429, 1470
BseXI	GCAGC	7 cut(s)	963, 1200, 1219, 1339, 1680, 1702, 2067
BseYI	CCCAGC	4 cut(s)	279, 522, 765, 1391
BshFI	GGCC	9 cut(s)	78, 264, 612, 705, 1445, 1849, 2059, 2129, 2194
BshNI	GGYRCC	1 cut(s)	1750
BshVI	ATCGAT	1 cut(s)	914
BsiHKAI	GWGCWC	2 cut(s)	1255, 1285
BsiSI	CCGG	7 cut(s)	181, 253, 258, 657, 1064, 1256, 2114
BslFI	GGGAC	4 cut(s)	296, 885, 1150, 1903
BslI	CCNNNNNNNGG	5 cut(s)	523, 712, 973, 1070, 1830
BsmAI	GTCTC	6 cut(s)	211, 254, 603, 971, 1533, 1764
BsmFI	GGGAC	4 cut(s)	296, 885, 1150, 1903
BsnI	GGCC	9 cut(s)	78, 264, 612, 705, 1445, 1849, 2059, 2129, 2194
Bso31I	GGTCTC	1 cut(s)	254
Bsp1286I	GDGCHC	2 cut(s)	1255, 1285
Bsp1407I	TGTACA	1 cut(s)	934
Bsp143I	GATC	8 cut(s)	911, 915, 1127, 1565, 1630, 1858, 1866, 1906
BspACI	CCGC	3 cut(s)	609, 1240, 1748
BspANI	GGCC	9 cut(s)	78, 264, 612, 705, 1445, 1849, 2059, 2129, 2194
BspCNI	CTCAG	4 cut(s)	305, 535, 1207, 1278
BspDI	ATCGAT	1 cut(s)	914
BspHI	TCATGA	1 cut(s)	1627
BspLI	GGNNCC	5 cut(s)	873, 1752, 1848, 2118, 2253
BspMI	ACCTGC	1 cut(s)	806
BspPI	GGATC	4 cut(s)	919, 1135, 1573, 1901
BspT107I	GGYRCC	1 cut(s)	1750
BspTNI	GGTCTC	1 cut(s)	254
BsrDI	GCAATG	2 cut(s)	1249, 1520
BsrGI	TGTACA	1 cut(s)	934
BsrI	ACTGG	1 cut(s)	1031
BssECI	CCNNGG	3 cut(s)	79, 437, 2060
BssMI	GATC	8 cut(s)	911, 915, 1127, 1565, 1630, 1858, 1866, 1906
BssNAI	GTATAC	1 cut(s)	1411
BssT1I	CCWWGG	2 cut(s)	79, 2060
Bst1107I	GTATAC	1 cut(s)	1411
Bst2UI	CCWGG	4 cut(s)	438, 876, 924, 1487
Bst4CI	ACNGT	8 cut(s)	62, 326, 355, 463, 793, 1619, 1842, 2015
BstAPI	GCANNNNNTGC	3 cut(s)	1014, 1712, 2089
BstAUI	TGTACA	1 cut(s)	934
BstC8I	GCNNGC	4 cut(s)	607, 1421, 1851, 2090
BstDEI	CTNAG	7 cut(s)	266, 292, 543, 1215, 1286, 1359, 2258
BstF5I	GGATG	4 cut(s)	884, 1082, 1701, 1717
BstKTI	GATC	8 cut(s)	914, 918, 1130, 1568, 1633, 1861, 1869, 1909
BstMAI	GTCTC	6 cut(s)	211, 254, 603, 971, 1533, 1764
BstMBI	GATC	8 cut(s)	911, 915, 1127, 1565, 1630, 1858, 1866, 1906
BstMWI	GCNNNNNNNGC	8 cut(s)	276, 297, 716, 1014, 1531, 1712, 2089, 2156
BstNI	CCWGG	4 cut(s)	438, 876, 924, 1487
BstNSI	RCATGY	1 cut(s)	489
BstSCI	CCNGG	5 cut(s)	436, 656, 874, 922, 1485
BstV1I	GCAGC	7 cut(s)	963, 1200, 1219, 1339, 1680, 1702, 2067
BstV2I	GAAGAC	3 cut(s)	10, 239, 1217
BstXI	CCANNNNNNTGG	1 cut(s)	64
BstZ17I	GTATAC	1 cut(s)	1411
Bsu15I	ATCGAT	1 cut(s)	914
BsuI	GTATCC	1 cut(s)	1831
BsuRI	GGCC	9 cut(s)	78, 264, 612, 705, 1445, 1849, 2059, 2129, 2194
BsuTUI	ATCGAT	1 cut(s)	914
BtgZI	GCGATG	1 cut(s)	1962
BtsCI	GGATG	4 cut(s)	884, 1082, 1701, 1717
BtsI	GCAGTG	3 cut(s)	96, 754, 1044
BtsIMutI	CAGTG	8 cut(s)	67, 96, 331, 754, 864, 1044, 1838, 2020
BveI	ACCTGC	1 cut(s)	806
Cac8I	GCNNGC	4 cut(s)	607, 1421, 1851, 2090
CaiI	CAGNNNCTG	1 cut(s)	408
CciI	TCATGA	1 cut(s)	1627
Cfr13I	GGNCC	7 cut(s)	255, 872, 926, 1197, 1847, 2030, 2057
ClaI	ATCGAT	1 cut(s)	914
CpoI	CGGWCCG	1 cut(s)	255
Csp6I	GTAC	8 cut(s)	671, 935, 964, 1334, 1467, 1606, 1915, 1922
CspCI	CAANNNNNGTGG	2 cut(s)	85, 120
CspI	CGGWCCG	1 cut(s)	255
CviQI	GTAC	8 cut(s)	671, 935, 964, 1334, 1467, 1606, 1915, 1922
DdeI	CTNAG	7 cut(s)	266, 292, 543, 1215, 1286, 1359, 2258
DpnI	GATC	8 cut(s)	913, 917, 1129, 1567, 1632, 1860, 1868, 1908
DpnII	GATC	8 cut(s)	911, 915, 1127, 1565, 1630, 1858, 1866, 1906
DriI	GACNNNNNGTC	1 cut(s)	1777
EaeI	YGGCCR	1 cut(s)	1443
Eam1105I	GACNNNNNGTC	1 cut(s)	1777
Eco130I	CCWWGG	2 cut(s)	79, 2060
Eco147I	AGGCCT	2 cut(s)	705, 2194
Eco31I	GGTCTC	1 cut(s)	254
Eco47I	GGWCC	5 cut(s)	255, 872, 926, 1197, 2030
Eco57I	CTGAAG	1 cut(s)	1344
EcoO109I	RGGNCCY	1 cut(s)	1847
EcoRII	CCWGG	4 cut(s)	436, 874, 922, 1485
EcoT14I	CCWWGG	2 cut(s)	79, 2060
EcoT22I	ATGCAT	1 cut(s)	2166
ErhI	CCWWGG	2 cut(s)	79, 2060
FalI	AAGNNNNNCTT	2 cut(s)	224, 256
FaqI	GGGAC	4 cut(s)	296, 885, 1150, 1903
FbaI	TGATCA	2 cut(s)	1630, 1858
FblI	GTMKAC	1 cut(s)	1410
Fnu4HI	GCNGC	8 cut(s)	610, 952, 1189, 1233, 1353, 1669, 1716, 2081
FokI	GGATG	4 cut(s)	891, 1069, 1708, 1724
Fsp4HI	GCNGC	8 cut(s)	610, 952, 1189, 1233, 1353, 1669, 1716, 2081
FspBI	CTAG	8 cut(s)	309, 885, 1278, 1337, 1464, 1517, 2196, 2263
GluI	GCNGC	8 cut(s)	610, 952, 1189, 1233, 1353, 1669, 1716, 2081
GsaI	CCCAGC	4 cut(s)	283, 526, 769, 1395
GsuI	CTGGAG	3 cut(s)	376, 430, 1167
HaeIII	GGCC	9 cut(s)	78, 264, 612, 705, 1445, 1849, 2059, 2129, 2194
HapII	CCGG	7 cut(s)	181, 253, 258, 657, 1064, 1256, 2114
HincII	GTYRAC	3 cut(s)	342, 388, 1110
HindII	GTYRAC	3 cut(s)	342, 388, 1110
HindIII	AAGCTT	3 cut(s)	580, 1100, 2086
HinfI	GANTC	8 cut(s)	513, 547, 596, 653, 803, 979, 1508, 1799
HpaII	CCGG	7 cut(s)	181, 253, 258, 657, 1064, 1256, 2114
HphI	GGTGA	5 cut(s)	371, 426, 1529, 1564, 1757
Hpy188III	TCNNGA	7 cut(s)	457, 471, 1436, 1450, 1628, 1862, 1910
HpyAV	CCTTC	4 cut(s)	46, 247, 281, 2015
HpyCH4III	ACNGT	8 cut(s)	62, 326, 355, 463, 793, 1619, 1842, 2015
HpyCH4IV	ACGT	4 cut(s)	313, 333, 338, 1929
HpyF10VI	GCNNNNNNNGC	8 cut(s)	276, 297, 716, 1014, 1531, 1712, 2089, 2156
HpyF3I	CTNAG	7 cut(s)	266, 292, 543, 1215, 1286, 1359, 2258
HpySE526I	ACGT	4 cut(s)	313, 333, 338, 1929
Ksp22I	TGATCA	2 cut(s)	1630, 1858
Kzo9I	GATC	8 cut(s)	911, 915, 1127, 1565, 1630, 1858, 1866, 1906
LmnI	GCTCC	5 cut(s)	539, 716, 1258, 1395, 1978
Lsp1109I	GCAGC	7 cut(s)	963, 1200, 1219, 1339, 1680, 1702, 2067
LweI	GCATC	5 cut(s)	352, 395, 1555, 1702, 1862
MaeI	CTAG	8 cut(s)	309, 885, 1278, 1337, 1464, 1517, 2196, 2263
MaeII	ACGT	4 cut(s)	313, 333, 338, 1929
MaeIII	GTNAC	5 cut(s)	334, 463, 901, 1836, 1898
MalI	GATC	8 cut(s)	913, 917, 1129, 1567, 1632, 1860, 1868, 1908
MboI	GATC	8 cut(s)	911, 915, 1127, 1565, 1630, 1858, 1866, 1906
MfeI	CAATTG	2 cut(s)	662, 2232
MhlI	GDGCHC	2 cut(s)	1255, 1285
MlsI	TGGCCA	1 cut(s)	1445
MluCI	AATT	9 cut(s)	662, 970, 1328, 1481, 1678, 1761, 2173, 2218, 2232
MluNI	TGGCCA	1 cut(s)	1445
MlyI	GAGTC	4 cut(s)	522, 605, 812, 973
MmeI	TCCRAC	9 cut(s)	220, 517, 766, 1076, 1105, 1224, 1776, 1956, 2086
Mox20I	TGGCCA	1 cut(s)	1445
Mph1103I	ATGCAT	1 cut(s)	2166
MroXI	GAANNNNTTC	5 cut(s)	236, 793, 1294, 1481, 2136
MscI	TGGCCA	1 cut(s)	1445
MslI	CAYNNNNRTG	4 cut(s)	327, 777, 1160, 1743
Msp20I	TGGCCA	1 cut(s)	1445
MspA1I	CMGCKG	2 cut(s)	954, 2143
MspI	CCGG	7 cut(s)	181, 253, 258, 657, 1064, 1256, 2114
MspR9I	CCNGG	5 cut(s)	438, 658, 876, 924, 1487
MunI	CAATTG	2 cut(s)	662, 2232
MvaI	CCWGG	4 cut(s)	438, 876, 924, 1487
MwoI	GCNNNNNNNGC	8 cut(s)	276, 297, 716, 1014, 1531, 1712, 2089, 2156
NciI	CCSGG	1 cut(s)	658
NdeII	GATC	8 cut(s)	911, 915, 1127, 1565, 1630, 1858, 1866, 1906
NlaIV	GGNNCC	5 cut(s)	873, 1752, 1848, 2118, 2253
NmeAIII	GCCGAG	1 cut(s)	1510
NmuCI	GTSAC	2 cut(s)	463, 1836
NsiI	ATGCAT	1 cut(s)	2166
NspI	RCATGY	1 cut(s)	489
PagI	TCATGA	1 cut(s)	1627
PceI	AGGCCT	2 cut(s)	705, 2194
PciI	ACATGT	1 cut(s)	485
PdmI	GAANNNNTTC	5 cut(s)	236, 793, 1294, 1481, 2136
PfeI	GAWTC	4 cut(s)	547, 653, 1508, 1799
PfoI	TCCNGGA	1 cut(s)	1485
PkrI	GCNGC	8 cut(s)	611, 953, 1190, 1234, 1354, 1670, 1717, 2082
PleI	GAGTC	4 cut(s)	521, 604, 811, 973
PpsI	GAGTC	4 cut(s)	521, 604, 811, 973
PscI	ACATGT	1 cut(s)	485
Psp1406I	AACGTT	2 cut(s)	338, 1929
Psp6I	CCWGG	4 cut(s)	436, 874, 922, 1485
PspFI	CCCAGC	4 cut(s)	279, 522, 765, 1391
PspGI	CCWGG	4 cut(s)	436, 874, 922, 1485
PspN4I	GGNNCC	5 cut(s)	873, 1752, 1848, 2118, 2253
PspPI	GGNCC	7 cut(s)	255, 872, 926, 1197, 1847, 2030, 2057
PstNI	CAGNNNCTG	1 cut(s)	408
PvuII	CAGCTG	2 cut(s)	954, 2143
RsaI	GTAC	8 cut(s)	672, 936, 965, 1335, 1468, 1607, 1916, 1923
RsaNI	GTAC	8 cut(s)	671, 935, 964, 1334, 1467, 1606, 1915, 1922
RseI	CAYNNNNRTG	4 cut(s)	327, 777, 1160, 1743
Rsr2I	CGGWCCG	1 cut(s)	255
RsrII	CGGWCCG	1 cut(s)	255
SatI	GCNGC	8 cut(s)	610, 952, 1189, 1233, 1353, 1669, 1716, 2081
Sau3AI	GATC	8 cut(s)	911, 915, 1127, 1565, 1630, 1858, 1866, 1906
Sau96I	GGNCC	7 cut(s)	255, 872, 926, 1197, 1847, 2030, 2057
ScaI	AGTACT	1 cut(s)	1916
SchI	GAGTC	4 cut(s)	522, 605, 812, 973
ScrFI	CCNGG	5 cut(s)	438, 658, 876, 924, 1487
SduI	GDGCHC	2 cut(s)	1255, 1285
SfaNI	GCATC	5 cut(s)	352, 395, 1555, 1702, 1862
SinI	GGWCC	5 cut(s)	255, 872, 926, 1197, 2030
SmiMI	CAYNNNNRTG	4 cut(s)	327, 777, 1160, 1743
SmlI	CTYRAG	1 cut(s)	366
SmoI	CTYRAG	1 cut(s)	366
SpeI	ACTAGT	1 cut(s)	1463
Sse9I	AATT	9 cut(s)	662, 970, 1328, 1481, 1678, 1761, 2173, 2218, 2232
SseBI	AGGCCT	2 cut(s)	705, 2194
SsiI	CCGC	3 cut(s)	609, 1240, 1748
SspMI	CTAG	8 cut(s)	309, 885, 1278, 1337, 1464, 1517, 2196, 2263
StuI	AGGCCT	2 cut(s)	705, 2194
StyD4I	CCNGG	5 cut(s)	436, 656, 874, 922, 1485
StyI	CCWWGG	2 cut(s)	79, 2060
TaaI	ACNGT	8 cut(s)	62, 326, 355, 463, 793, 1619, 1842, 2015
TaiI	ACGT	4 cut(s)	316, 336, 341, 1932
TaqI	TCGA	3 cut(s)	806, 914, 995
TaqII	GACCGA	1 cut(s)	1037
TasI	AATT	9 cut(s)	662, 970, 1328, 1481, 1678, 1761, 2173, 2218, 2232
TatI	WGTACW	6 cut(s)	934, 1333, 1466, 1605, 1914, 1921
TauI	GCSGC	1 cut(s)	612
TfiI	GAWTC	4 cut(s)	547, 653, 1508, 1799
TscAI	CASTG	8 cut(s)	67, 103, 331, 754, 864, 1044, 1845, 2020
TseFI	GTSAC	2 cut(s)	463, 1836
TseI	GCWGC	7 cut(s)	951, 1188, 1232, 1352, 1668, 1715, 2080
Tsp45I	GTSAC	2 cut(s)	463, 1836
TspDTI	ATGAA	8 cut(s)	10, 28, 148, 515, 786, 1068, 1287, 1616
TspGWI	ACGGA	2 cut(s)	631, 676
TspRI	CASTG	8 cut(s)	67, 103, 331, 754, 864, 1044, 1845, 2020
VpaK11BI	GGWCC	5 cut(s)	255, 872, 926, 1197, 2030
XapI	RAATTY	5 cut(s)	970, 1328, 1481, 1678, 2173
XceI	RCATGY	1 cut(s)	489
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1382
XmiI	GTMKAC	1 cut(s)	1410
XmnI	GAANNNNTTC	5 cut(s)	236, 793, 1294, 1481, 2136
XspI	CTAG	8 cut(s)	309, 885, 1278, 1337, 1464, 1517, 2196, 2263
ZrmI	AGTACT	1 cut(s)	1916
Zsp2I	ATGCAT	1 cut(s)	2166

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.