Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0003366

Physical Location & Seq

Genomic Coordinates Reverse (-)

18883245 .. 18885614

Gene Structure 2370 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g24490.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2370 bp

ATGACGAAACTACCCTTCTCCGTTTTCATTTCCATCCTCACCGTCTTCTTCACCGTCCCATTTTCCCATGCACTCGGCTCCGGCGCCACTCTCGCCGTCAGCTACCCCTCCGGCGCCGTCTGCGGCCTGGTCTCCGGCCAACCCACGCAGCGCATAGTCTGCTACCTCCGAGGCCAAACCATCAACGTCGAGCCCAACATCTCCTTCTCGTCAATCTCCGGCGGCCGGACCTCTCTCTGCGGCCTCCGCTCCGGCGGCTACGCCCTCCTCTGTTACGACAATCTCCTCTCTCAAAACTCAACCTTTACTTCGAAAAGAGTCTACTTTAACGAAACCGGTGAGCTCGAAAACATATCAGTCGGAGAAAACCATTTTTGCGCCAGCGTGGCAGGCTCCGGCGCCGTGAAATGTTGGCGAGGAGATACCAGAACGTTTCCACTTCCATCTGGGTCGGACCAATTCGGGTCCATCTCATCTGGGTCGGGCTTCTCTTGTGGAATCACCAAGAACAGTTCAAGGGTCCGGTGCTGGGGGACTAGTACTTCCATGGCCGCCGAGATTGAAAACGGCTTCGGAGAAACGGCAATGGCGACTATCCAAGCTGGTGGTTCTCACGTGTGTGGAGTCAACGTTACTGGGTCAATAATCTGCAGAGGCAACAACGACTCTGGTCAATTAAATGCACCGCCGGGAAGTTATTCCGGCTTGGCTCTCGGAGATAACCACAGCTGTGCTATTAGAATTTCAAACCAGTCTGTGATTTGCTGGGGCGGCAGAGGAGGAGAGTTCAGGTCTAATGTGACTGCAGCGACGTCGTTTCAGGTGATCGTTTCAGGGTCTAATTTCACTTGTGGATTAACCTCGAGTAACTTTTCGATTATATGTTGGGGAGTTGGTTGGCCTAGTTCAGAGGTTGAAGGTGAGCTTGGGTTGCCGGAGATTCTTCCAGGTCGTTGTGTACAGTCGTCTTGTAGTGAATGTGGTATTTATCCTCAGTCTCAGAAGCTCTGTTATGGCTCTGGGAACATTTGTAATCCTTGTCCGATTTTGGTGCCGACATCACCGCCGTCTCCGGCGGTGAAACCGCCGGCGGATTCTCCATCCGGGGGTTTAAAGACGGGGTTGTTAGTGTTCTGCATTGTGGGTTCTATTGGAGGGTTTGCGGGGATTTGTACTGTGATTTATTGTTTGTGGAGGGGTGGTTGTTTTGGGCACAAGAAAGTTCATAATTCAGTTCAGCCTACTATTACTAGAGGTGGAGGTGGTAGTTCCAACAATGGGAATATGTCAAACAACAGCCCTCCTTCAAGATCAGCTACTATTAGGCGGCAGGGCTCGAGGATCATGAGGAGGCAGAGGAGTGGGACTTCGTCAAATAAGCACACTGAGAGGGCTGAGGAGTTTTCACTGGCTGAGCTTGCAGCGGCTACTAATGGTTTTGCATTGGAGAACAAGATTGGCGCAGGGAGCTTTGGAGTGGTGTACAGAGGGAAATTGGATGACGGGCGCGAGGTTGCTATTAAGAGAGGGGAAACTACAACCAAGATGAAGAAGTATCAAGAGAAAGAGAGTGCTTTTGATTCAGAGTTGGCGTTCTTGTCGAGGCTTCATCACAAGCATTTGGTTAGGCTTGTTGGGTATTGTGAGGAGAAGGAGGAGAGGTTGTTGGTTTATGAGTACATGAAGAATGGTGCGCTCTATGATCATTTACATGACAAGAACAATGTCGAGAGGAGTAGTAGTTTGATTAATTCGTGGAAAATGAGGATCAAGGTGGCTTTAGATGCTGCAAGAGGCATTGAGTATCTCCACAACTATGCAGTCCCTCCTATAATTCACAGAGATATAAAGTCCTCCAACATTCTGATCGATGGTAATTGGACTGGAAGAGTATCAGATTTCGGATTATCACTATTGGGTCCGGAACATGGCAGGGACTATAGGCCAATGAAGGCAGCTGGAACCGTTGGCTACATTGATCCAGAGTACTATGGTTTAAACTTATTAACAGCAAAGAGTGATGTGTATGGCCTTGGTGTGGTGTTGTTAGAGCTTTTGACAGGAAAAAGAGCAATCTTTAGGAACAGTGAAGACGGAGGAACACCCACCAGTGTTGTGGACTACACCGTGCCGCAGATCATGGCCGGAGAGTTAGAGAAGGTTTTGGACCCAAGGGTTGGACCTCCGGAAATCAATGAAGCAGAGGCGGTTGAGTTGGTGGCGTATACTGCAATGCATTGTGTGAACTTGGAAGGTAAAGATAGACCAACCATGACTGACATTGTGGCCAATTTGGAGCGAGCTTTAAGTCTCTGCGAGGAAAGCCCTGTTGGCAGCATATCTAGCGGCTCAATCATCTCTGCCGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0042802 GO:0042803 GO:0046983

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05169 map04010 map04064 map04620 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05169

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr RCC1_2

Protein Analysis

790

Amino Acids

84.17

Weight (kDa)

7.69

Isoelectric Point (pI)

44.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	481 - 763	3.1e-42	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	482 - 765	1.3e-40	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003366)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55950
fragaria_vesca	FvH4_3g38710 FvH4_7g24490
malus_domestica	MD00G1166500.v1.1 MD01G1153100.v1.1 MD03G1068800.v1.1 MD07G1222100.v1.1 MD11G1073300.v1.1
prunus_persica	Prupe.2G250300_v2.0.a1 Prupe.6G056600_v2.0.a1
pyrus_communis	pycom01g17070 pycom03g05510
rosa_chinensis	RchiOBHm_Chr1g0370251 RchiOBHm_Chr5g0065501 RchiOBHm_Chr5g0069861
rosa_laevigata	RLG00000027065 RLG00000036103
rosa_multiflora	Rmu_co8321277.1_g000001 Rmu_sc0000738.1_g000002 Rmu_sc0026893.1_g000001 Rmu_sc0037931.1_g000001
rosa_roxburghii	Rroxscaffold_1G00011190 Rroxscaffold_4G00286710 Rroxscaffold_4G00287300
rosa_rugosa	Rorug01G0355200 Rorug05G0400300
rosa_samantha	Rh1AG363800 Rh1BG326900 Rh1CG340200 Rh1DG357300 Rh5AG457400 Rh5BG476200 Rh5CG500000 Rh5DG488000
rosa_wichuraiana	Rw1G032010 Rw5G042700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	815
AccB1I	GGYRCC	4 cut(s)	83, 113, 398, 1051
AccB7I	CCANNNNNTGG	1 cut(s)	2177
AccBSI	CCGCTC	1 cut(s)	249
AccI	GTMKAC	2 cut(s)	321, 2225
AccII	CGCG	1 cut(s)	1509
AccIII	TCCGGA	2 cut(s)	1921, 2185
AclI	AACGTT	2 cut(s)	431, 630
AclWI	GGATC	3 cut(s)	1349, 1775, 1973
AcoI	YGGCCR	5 cut(s)	136, 223, 549, 2142, 2286
AcsI	RAATTY	1 cut(s)	741
AcvI	CACGTG	1 cut(s)	616
AcyI	GRCGYC	4 cut(s)	84, 114, 399, 812
AfaI	GTAC	6 cut(s)	541, 960, 1174, 1484, 1679, 1988
AfiI	CCNNNNNNNGG	7 cut(s)	225, 529, 1106, 1278, 1928, 2038, 2177
AflIII	ACRYGT	1 cut(s)	615
AgeI	ACCGGT	1 cut(s)	335
AgsI	TTSAA	5 cut(s)	516, 563, 747, 917, 1308
AhlI	ACTAGT	1 cut(s)	536
AjnI	CCWGG	2 cut(s)	126, 946
AjuI	GAANNNNNNNTTGG	6 cut(s)	188, 220, 909, 941, 2313, 2345
AleI	CACNNNNGTG	2 cut(s)	618, 729
Alw21I	GWGCWC	1 cut(s)	345
Alw26I	GTCTC	4 cut(s)	136, 1002, 1074, 2315
AlwI	GGATC	3 cut(s)	1349, 1775, 1973
Ama87I	CYCGRG	2 cut(s)	862, 1336
Aor13HI	TCCGGA	2 cut(s)	1921, 2185
ApeKI	GCWGC	6 cut(s)	148, 806, 1421, 1787, 1955, 2334
ApoI	RAATTY	1 cut(s)	741
AseI	ATTAAT	1 cut(s)	1749
AsiGI	ACCGGT	1 cut(s)	335
Asp700I	GAANNNNTTC	1 cut(s)	697
AspLEI	GCGC	8 cut(s)	86, 116, 153, 380, 401, 1463, 1509, 1696
AspS9I	GGNCC	7 cut(s)	228, 454, 465, 520, 1919, 2167, 2180
AsuC2I	CCSGG	2 cut(s)	690, 1105
AsuHPI	GGTGA	8 cut(s)	31, 43, 350, 493, 835, 932, 1053, 1090
AsuII	TTCGAA	1 cut(s)	311
AvaI	CYCGRG	2 cut(s)	862, 1336
AvaII	GGWCC	7 cut(s)	228, 454, 465, 520, 1919, 2167, 2180
BaeGI	GKGCMC	1 cut(s)	1215
BalI	TGGCCA	1 cut(s)	2288
BanI	GGYRCC	4 cut(s)	83, 113, 398, 1051
BanII	GRGCYC	3 cut(s)	195, 345, 1337
BbrPI	CACGTG	1 cut(s)	616
BbsI	GAAGAC	2 cut(s)	37, 2097
Bbv12I	GWGCWC	1 cut(s)	345
BbvCI	CCTCAGC	1 cut(s)	1395
BbvI	GCAGC	6 cut(s)	160, 818, 1433, 1774, 1967, 2346
BccI	CCATC	6 cut(s)	41, 188, 451, 476, 1108, 1865
BceAI	ACGGC	6 cut(s)	80, 101, 386, 583, 597, 1051
BcgI	CGANNNNNNTGC	4 cut(s)	795, 829, 1033, 1067
BciT130I	CCWGG	2 cut(s)	128, 948
BclI	TGATCA	1 cut(s)	1702
BcnI	CCSGG	2 cut(s)	690, 1105
BcoDI	GTCTC	4 cut(s)	136, 1002, 1074, 2315
BcuI	ACTAGT	1 cut(s)	536
BfaI	CTAG	4 cut(s)	537, 903, 1251, 2343
BfmI	CTRYAG	3 cut(s)	649, 804, 1939
BfoI	RGCGCY	3 cut(s)	87, 117, 402
BglI	GCCNNNNNGGC	2 cut(s)	386, 2331
BlpI	GCTNAGC	1 cut(s)	1413
BmcAI	AGTACT	2 cut(s)	541, 1988
Bme1390I	CCNGG	4 cut(s)	128, 690, 948, 1105
Bme18I	GGWCC	7 cut(s)	228, 454, 465, 520, 1919, 2167, 2180
BmeT110I	CYCGRG	2 cut(s)	862, 1336
BmgT120I	GGNCC	7 cut(s)	228, 454, 465, 520, 1919, 2167, 2180
BmrFI	CCNGG	4 cut(s)	128, 690, 948, 1105
BmrI	ACTGGG	1 cut(s)	645
BmsI	GCATC	1 cut(s)	1774
BmuI	ACTGGG	1 cut(s)	645
BoxI	GACNNNNGTC	1 cut(s)	669
BpiI	GAAGAC	2 cut(s)	37, 2097
Bpu10I	CCTNAGC	1 cut(s)	1395
Bpu1102I	GCTNAGC	1 cut(s)	1413
Bpu14I	TTCGAA	1 cut(s)	311
BpuMI	CCSGG	2 cut(s)	690, 1105
Bsa29I	ATCGAT	1 cut(s)	1869
BsaAI	YACGTR	1 cut(s)	616
BsaHI	GRCGYC	4 cut(s)	84, 114, 399, 812
BsaI	GGTCTC	1 cut(s)	136
BsaJI	CCNNGG	5 cut(s)	169, 546, 1104, 2032, 2171
BsaWI	WCCGGW	4 cut(s)	335, 522, 1921, 2185
Bsc4I	CCNNNNNNNGG	7 cut(s)	225, 529, 1106, 1278, 1928, 2038, 2177
Bse118I	RCCGGY	2 cut(s)	335, 1087
Bse1I	ACTGG	5 cut(s)	640, 751, 1413, 1888, 2109
Bse3DI	GCAATG	2 cut(s)	591, 2238
BseAI	TCCGGA	2 cut(s)	1921, 2185
BseBI	CCWGG	2 cut(s)	128, 948
BseCI	ATCGAT	1 cut(s)	1869
BseDI	CCNNGG	5 cut(s)	169, 546, 1104, 2032, 2171
BseGI	GGATG	3 cut(s)	33, 1100, 1504
BseLI	CCNNNNNNNGG	7 cut(s)	225, 529, 1106, 1278, 1928, 2038, 2177
BseMI	GCAATG	2 cut(s)	591, 2238
BseMII	CTCAG	5 cut(s)	1007, 1013, 1377, 1386, 1404
BseNI	ACTGG	5 cut(s)	640, 751, 1413, 1888, 2109
BseSI	GKGCMC	1 cut(s)	1215
BseX3I	CGGCCG	1 cut(s)	223
BseXI	GCAGC	6 cut(s)	160, 818, 1433, 1774, 1967, 2346
BseYI	CCCAGC	2 cut(s)	528, 765
Bsh1236I	CGCG	1 cut(s)	1509
Bsh1285I	CGRYCG	1 cut(s)	226
BshNI	GGYRCC	4 cut(s)	83, 113, 398, 1051
BshTI	ACCGGT	1 cut(s)	335
BshVI	ATCGAT	1 cut(s)	1869
BsiEI	CGRYCG	1 cut(s)	226
BsiHKAI	GWGCWC	1 cut(s)	345
BsiHKCI	CYCGRG	2 cut(s)	862, 1336
BslFI	GGGAC	5 cut(s)	41, 547, 1378, 1808, 1949
BslI	CCNNNNNNNGG	7 cut(s)	225, 529, 1106, 1278, 1928, 2038, 2177
BsmAI	GTCTC	4 cut(s)	136, 1002, 1074, 2315
BsmBI	CGTCTC	1 cut(s)	1074
BsmFI	GGGAC	5 cut(s)	41, 547, 1378, 1808, 1949
Bso31I	GGTCTC	1 cut(s)	136
BsoBI	CYCGRG	2 cut(s)	862, 1336
Bsp119I	TTCGAA	1 cut(s)	311
Bsp1286I	GDGCHC	4 cut(s)	195, 345, 1215, 1337
Bsp13I	TCCGGA	2 cut(s)	1921, 2185
Bsp1407I	TGTACA	2 cut(s)	958, 1482
Bsp143I	GATC	8 cut(s)	825, 1310, 1341, 1702, 1767, 1866, 1978, 2136
Bsp1720I	GCTNAGC	1 cut(s)	1413
Bsp19I	CCATGG	1 cut(s)	546
BspCNI	CTCAG	5 cut(s)	1006, 1012, 1378, 1387, 1405
BspDI	ATCGAT	1 cut(s)	1869
BspEI	TCCGGA	2 cut(s)	1921, 2185
BspFNI	CGCG	1 cut(s)	1509
BspHI	TCATGA	1 cut(s)	1344
BspMAI	CTGCAG	2 cut(s)	653, 808
BspPI	GGATC	3 cut(s)	1349, 1775, 1973
BspT104I	TTCGAA	1 cut(s)	311
BspT107I	GGYRCC	4 cut(s)	83, 113, 398, 1051
BspTNI	GGTCTC	1 cut(s)	136
BsrBI	CCGCTC	1 cut(s)	249
BsrDI	GCAATG	2 cut(s)	591, 2238
BsrFI	RCCGGY	2 cut(s)	335, 1087
BsrGI	TGTACA	2 cut(s)	958, 1482
BsrI	ACTGG	5 cut(s)	640, 751, 1413, 1888, 2109
BssAI	RCCGGY	2 cut(s)	335, 1087
BssECI	CCNNGG	5 cut(s)	169, 546, 1104, 2032, 2171
BssMI	GATC	8 cut(s)	825, 1310, 1341, 1702, 1767, 1866, 1978, 2136
BssNAI	GTATAC	1 cut(s)	2226
BssNI	GRCGYC	4 cut(s)	84, 114, 399, 812
BssT1I	CCWWGG	3 cut(s)	546, 2032, 2171
Bst1107I	GTATAC	1 cut(s)	2226
Bst2UI	CCWGG	2 cut(s)	128, 948
Bst4CI	ACNGT	8 cut(s)	43, 55, 512, 963, 1177, 1966, 2087, 2128
Bst6I	CTCTTC	1 cut(s)	1882
BstACI	GRCGYC	4 cut(s)	84, 114, 399, 812
BstAPI	GCANNNNNTGC	1 cut(s)	159
BstAUI	TGTACA	2 cut(s)	958, 1482
BstBAI	YACGTR	1 cut(s)	616
BstBI	TTCGAA	1 cut(s)	311
BstC8I	GCNNGC	5 cut(s)	382, 391, 1089, 1419, 2301
BstDEI	CTNAG	5 cut(s)	993, 999, 1386, 1395, 1413
BstDSI	CCRYGG	1 cut(s)	546
BstF5I	GGATG	3 cut(s)	33, 1100, 1504
BstFNI	CGCG	1 cut(s)	1509
BstH2I	RGCGCY	3 cut(s)	87, 117, 402
BstHHI	GCGC	8 cut(s)	86, 116, 153, 380, 401, 1463, 1509, 1696
BstKTI	GATC	8 cut(s)	828, 1313, 1344, 1705, 1770, 1869, 1981, 2139
BstMAI	GTCTC	4 cut(s)	136, 1002, 1074, 2315
BstMBI	GATC	8 cut(s)	825, 1310, 1341, 1702, 1767, 1866, 1978, 2136
BstMCI	CGRYCG	1 cut(s)	226
BstNI	CCWGG	2 cut(s)	128, 948
BstPAI	GACNNNNGTC	1 cut(s)	669
BstSCI	CCNGG	4 cut(s)	126, 688, 946, 1103
BstSFI	CTRYAG	3 cut(s)	649, 804, 1939
BstSLI	GKGCMC	1 cut(s)	1215
BstUI	CGCG	1 cut(s)	1509
BstV1I	GCAGC	6 cut(s)	160, 818, 1433, 1774, 1967, 2346
BstV2I	GAAGAC	2 cut(s)	37, 2097
BstXI	CCANNNNNNTGG	2 cut(s)	605, 2116
BstZ17I	GTATAC	1 cut(s)	2226
BstZI	CGGCCG	1 cut(s)	223
Bsu15I	ATCGAT	1 cut(s)	1869
BsuTUI	ATCGAT	1 cut(s)	1869
BtgI	CCRYGG	1 cut(s)	546
BtsCI	GGATG	3 cut(s)	33, 1100, 1504
BtsIMutI	CAGTG	4 cut(s)	1383, 1406, 2092, 2116
Cac8I	GCNNGC	5 cut(s)	382, 391, 1089, 1419, 2301
CciI	TCATGA	1 cut(s)	1344
CfoI	GCGC	8 cut(s)	86, 116, 153, 380, 401, 1463, 1509, 1696
Cfr10I	RCCGGY	2 cut(s)	335, 1087
Cfr13I	GGNCC	7 cut(s)	228, 454, 465, 520, 1919, 2167, 2180
ClaI	ATCGAT	1 cut(s)	1869
Csp6I	GTAC	6 cut(s)	540, 959, 1173, 1483, 1678, 1987
CspAI	ACCGGT	1 cut(s)	335
CspCI	CAANNNNNGTGG	2 cut(s)	2095, 2130
CviAII	CATG	8 cut(s)	68, 547, 1345, 1681, 1712, 1928, 2140, 2272
CviQI	GTAC	6 cut(s)	540, 959, 1173, 1483, 1678, 1987
DdeI	CTNAG	5 cut(s)	993, 999, 1386, 1395, 1413
DinI	GGCGCC	3 cut(s)	85, 115, 400
DpnI	GATC	8 cut(s)	827, 1312, 1343, 1704, 1769, 1868, 1980, 2138
DpnII	GATC	8 cut(s)	825, 1310, 1341, 1702, 1767, 1866, 1978, 2136
DraI	TTTAAA	2 cut(s)	1113, 1998
EaeI	YGGCCR	5 cut(s)	136, 223, 549, 2142, 2286
EagI	CGGCCG	1 cut(s)	223
Eam1104I	CTCTTC	1 cut(s)	1882
EarI	CTCTTC	1 cut(s)	1882
EciI	GGCGGA	1 cut(s)	1106
Ecl136II	GAGCTC	1 cut(s)	343
EclXI	CGGCCG	1 cut(s)	223
Eco130I	CCWWGG	3 cut(s)	546, 2032, 2171
Eco24I	GRGCYC	3 cut(s)	195, 345, 1337
Eco31I	GGTCTC	1 cut(s)	136
Eco47I	GGWCC	7 cut(s)	228, 454, 465, 520, 1919, 2167, 2180
Eco52I	CGGCCG	1 cut(s)	223
Eco53kI	GAGCTC	1 cut(s)	343
Eco72I	CACGTG	1 cut(s)	616
Eco88I	CYCGRG	2 cut(s)	862, 1336
EcoICRI	GAGCTC	1 cut(s)	343
EcoRII	CCWGG	2 cut(s)	126, 946
EcoT14I	CCWWGG	3 cut(s)	546, 2032, 2171
EcoT22I	ATGCAT	1 cut(s)	2238
EcoT38I	GRGCYC	3 cut(s)	195, 345, 1337
EgeI	GGCGCC	3 cut(s)	85, 115, 400
EheI	GGCGCC	3 cut(s)	85, 115, 400
ErhI	CCWWGG	3 cut(s)	546, 2032, 2171
Esp3I	CGTCTC	1 cut(s)	1074
FaeI	CATG	8 cut(s)	71, 550, 1348, 1684, 1715, 1931, 2143, 2275
FalI	AAGNNNNNCTT	2 cut(s)	909, 941
FaqI	GGGAC	5 cut(s)	41, 547, 1378, 1808, 1949
FatI	CATG	8 cut(s)	67, 546, 1344, 1680, 1711, 1927, 2139, 2271
FauI	CCCGC	1 cut(s)	1156
FbaI	TGATCA	1 cut(s)	1702
FblI	GTMKAC	2 cut(s)	321, 2225
FokI	GGATG	3 cut(s)	20, 1087, 1511
FriOI	GRGCYC	3 cut(s)	195, 345, 1337
FspBI	CTAG	4 cut(s)	537, 903, 1251, 2343
GlaI	GCGC	8 cut(s)	85, 115, 152, 379, 400, 1462, 1508, 1695
GsaI	CCCAGC	2 cut(s)	532, 769
HaeII	RGCGCY	3 cut(s)	87, 117, 402
HhaI	GCGC	8 cut(s)	86, 116, 153, 380, 401, 1463, 1509, 1696
Hin1I	GRCGYC	4 cut(s)	84, 114, 399, 812
Hin1II	CATG	8 cut(s)	71, 550, 1348, 1684, 1715, 1931, 2143, 2275
Hin6I	GCGC	8 cut(s)	84, 114, 151, 378, 399, 1461, 1507, 1694
HinP1I	GCGC	8 cut(s)	84, 114, 151, 378, 399, 1461, 1507, 1694
HincII	GTYRAC	1 cut(s)	628
HindII	GTYRAC	1 cut(s)	628
HinfI	GANTC	7 cut(s)	318, 498, 624, 665, 940, 1094, 1580
HphI	GGTGA	8 cut(s)	31, 43, 350, 493, 835, 932, 1053, 1090
Hpy166II	GTNNAC	7 cut(s)	322, 628, 959, 1483, 2119, 2226, 2245
Hpy188III	TCNNGA	7 cut(s)	1308, 1345, 1559, 1729, 1922, 1982, 2186
Hpy8I	GTNNAC	7 cut(s)	322, 628, 959, 1483, 2119, 2226, 2245
Hpy99I	CGWCG	3 cut(s)	191, 814, 817
HpyAV	CCTTC	8 cut(s)	25, 214, 911, 1314, 1645, 1945, 2152, 2246
HpyCH4III	ACNGT	8 cut(s)	43, 55, 512, 963, 1177, 1966, 2087, 2128
HpyCH4IV	ACGT	5 cut(s)	186, 431, 615, 630, 812
HpyF3I	CTNAG	5 cut(s)	993, 999, 1386, 1395, 1413
HpySE526I	ACGT	5 cut(s)	186, 431, 615, 630, 812
Hsp92I	GRCGYC	4 cut(s)	84, 114, 399, 812
Hsp92II	CATG	8 cut(s)	71, 550, 1348, 1684, 1715, 1931, 2143, 2275
HspAI	GCGC	8 cut(s)	84, 114, 151, 378, 399, 1461, 1507, 1694
KasI	GGCGCC	3 cut(s)	83, 113, 398
Kpn2I	TCCGGA	2 cut(s)	1921, 2185
KroI	GCCGGC	1 cut(s)	1087
KroNI	GCCGGC	1 cut(s)	1089
Ksp22I	TGATCA	1 cut(s)	1702
Kzo9I	GATC	8 cut(s)	825, 1310, 1341, 1702, 1767, 1866, 1978, 2136
LmnI	GCTCC	5 cut(s)	83, 254, 398, 1467, 2296
Lsp1109I	GCAGC	6 cut(s)	160, 818, 1433, 1774, 1967, 2346
LweI	GCATC	1 cut(s)	1774
MaeI	CTAG	4 cut(s)	537, 903, 1251, 2343
MaeII	ACGT	5 cut(s)	186, 431, 615, 630, 812
MaeIII	GTNAC	4 cut(s)	272, 631, 799, 866
MalI	GATC	8 cut(s)	827, 1312, 1343, 1704, 1769, 1868, 1980, 2138
MbiI	CCGCTC	1 cut(s)	249
MboI	GATC	8 cut(s)	825, 1310, 1341, 1702, 1767, 1866, 1978, 2136
MboII	GAAGA	7 cut(s)	37, 40, 935, 1561, 1696, 1899, 2102
MhlI	GDGCHC	4 cut(s)	195, 345, 1215, 1337
MlsI	TGGCCA	1 cut(s)	2288
MluNI	TGGCCA	1 cut(s)	2288
Mly113I	GGCGCC	3 cut(s)	84, 114, 399
MlyI	GAGTC	3 cut(s)	327, 633, 659
MmeI	TCCRAC	5 cut(s)	340, 432, 1296, 1881, 2158
Mox20I	TGGCCA	1 cut(s)	2288
Mph1103I	ATGCAT	1 cut(s)	2238
MreI	CGCCGGCG	1 cut(s)	1087
MroI	TCCGGA	2 cut(s)	1921, 2185
MroNI	GCCGGC	1 cut(s)	1087
MroXI	GAANNNNTTC	1 cut(s)	697
MscI	TGGCCA	1 cut(s)	2288
MseI	TTAA	9 cut(s)	327, 677, 857, 1112, 1521, 1749, 1997, 2006, 2306
MslI	CAYNNNNRTG	4 cut(s)	618, 729, 1710, 1815
Msp20I	TGGCCA	1 cut(s)	2288
MspA1I	CMGCKG	3 cut(s)	729, 1424, 1958
MspR9I	CCNGG	4 cut(s)	128, 690, 948, 1105
MssI	GTTTAAAC	1 cut(s)	1998
MvaI	CCWGG	2 cut(s)	128, 948
MvnI	CGCG	1 cut(s)	1509
NaeI	GCCGGC	1 cut(s)	1089
NarI	GGCGCC	3 cut(s)	84, 114, 399
NciI	CCSGG	2 cut(s)	690, 1105
NcoI	CCATGG	1 cut(s)	546
NdeII	GATC	8 cut(s)	825, 1310, 1341, 1702, 1767, 1866, 1978, 2136
NgoMIV	GCCGGC	1 cut(s)	1087
NlaIII	CATG	8 cut(s)	71, 550, 1348, 1684, 1715, 1931, 2143, 2275
NmeAIII	GCCGAG	2 cut(s)	54, 580
NmuCI	GTSAC	1 cut(s)	799
NsiI	ATGCAT	1 cut(s)	2238
NspV	TTCGAA	1 cut(s)	311
OliI	CACNNNNGTG	2 cut(s)	618, 729
PaeR7I	CTCGAG	2 cut(s)	862, 1336
PagI	TCATGA	1 cut(s)	1344
PcsI	WCGNNNNNNNCGW	1 cut(s)	587
PdiI	GCCGGC	1 cut(s)	1089
PdmI	GAANNNNTTC	1 cut(s)	697
PfeI	GAWTC	4 cut(s)	498, 940, 1094, 1580
PflFI	GACNNNGTC	1 cut(s)	1369
PflMI	CCANNNNNTGG	1 cut(s)	2177
PinAI	ACCGGT	1 cut(s)	335
PleI	GAGTC	3 cut(s)	326, 632, 659
PluTI	GGCGCC	3 cut(s)	87, 117, 402
PmaCI	CACGTG	1 cut(s)	616
PmeI	GTTTAAAC	1 cut(s)	1998
PmlI	CACGTG	1 cut(s)	616
PpsI	GAGTC	3 cut(s)	326, 632, 659
Ppu21I	YACGTR	1 cut(s)	616
PshAI	GACNNNNGTC	1 cut(s)	669
PshBI	ATTAAT	1 cut(s)	1749
Psp124BI	GAGCTC	1 cut(s)	345
Psp1406I	AACGTT	2 cut(s)	431, 630
Psp6I	CCWGG	2 cut(s)	126, 946
PspCI	CACGTG	1 cut(s)	616
PspFI	CCCAGC	2 cut(s)	528, 765
PspGI	CCWGG	2 cut(s)	126, 946
PspPI	GGNCC	7 cut(s)	228, 454, 465, 520, 1919, 2167, 2180
PspXI	VCTCGAGB	2 cut(s)	862, 1336
PstI	CTGCAG	2 cut(s)	653, 808
PsyI	GACNNNGTC	1 cut(s)	1369
PvuII	CAGCTG	2 cut(s)	729, 1958
RsaI	GTAC	6 cut(s)	541, 960, 1174, 1484, 1679, 1988
RsaNI	GTAC	6 cut(s)	540, 959, 1173, 1483, 1678, 1987
RseI	CAYNNNNRTG	4 cut(s)	618, 729, 1710, 1815
SacI	GAGCTC	1 cut(s)	345
SaqAI	TTAA	9 cut(s)	327, 677, 857, 1112, 1521, 1749, 1997, 2006, 2306
Sau3AI	GATC	8 cut(s)	825, 1310, 1341, 1702, 1767, 1866, 1978, 2136
Sau96I	GGNCC	7 cut(s)	228, 454, 465, 520, 1919, 2167, 2180
ScaI	AGTACT	2 cut(s)	541, 1988
SchI	GAGTC	3 cut(s)	327, 633, 659
ScrFI	CCNGG	4 cut(s)	128, 690, 948, 1105
SduI	GDGCHC	4 cut(s)	195, 345, 1215, 1337
SfaNI	GCATC	1 cut(s)	1774
SfcI	CTRYAG	3 cut(s)	649, 804, 1939
SfoI	GGCGCC	3 cut(s)	85, 115, 400
Sfr274I	CTCGAG	2 cut(s)	862, 1336
SfuI	TTCGAA	1 cut(s)	311
SgrAI	CRCCGGYG	1 cut(s)	1087
SinI	GGWCC	7 cut(s)	228, 454, 465, 520, 1919, 2167, 2180
SlaI	CTCGAG	2 cut(s)	862, 1336
SmiMI	CAYNNNNRTG	4 cut(s)	618, 729, 1710, 1815
SmlI	CTYRAG	2 cut(s)	862, 1336
SmoI	CTYRAG	2 cut(s)	862, 1336
SpeI	ACTAGT	1 cut(s)	536
SspDI	GGCGCC	3 cut(s)	83, 113, 398
SspMI	CTAG	4 cut(s)	537, 903, 1251, 2343
SstI	GAGCTC	1 cut(s)	345
StyD4I	CCNGG	4 cut(s)	126, 688, 946, 1103
StyI	CCWWGG	3 cut(s)	546, 2032, 2171
TaaI	ACNGT	8 cut(s)	43, 55, 512, 963, 1177, 1966, 2087, 2128
TaiI	ACGT	5 cut(s)	189, 434, 618, 633, 815
TaqI	TCGA	9 cut(s)	189, 311, 345, 863, 875, 1337, 1601, 1728, 1869
TatI	WGTACW	6 cut(s)	539, 958, 1172, 1482, 1677, 1986
TfiI	GAWTC	4 cut(s)	498, 940, 1094, 1580
Tru1I	TTAA	9 cut(s)	327, 677, 857, 1112, 1521, 1749, 1997, 2006, 2306
Tru9I	TTAA	9 cut(s)	327, 677, 857, 1112, 1521, 1749, 1997, 2006, 2306
TscAI	CASTG	4 cut(s)	1390, 1413, 2092, 2116
TseFI	GTSAC	1 cut(s)	799
TseI	GCWGC	6 cut(s)	148, 806, 1421, 1787, 1955, 2334
Tsp45I	GTSAC	1 cut(s)	799
TspDTI	ATGAA	7 cut(s)	16, 1214, 1562, 1598, 1697, 1964, 2211
TspGWI	ACGGA	2 cut(s)	10, 2109
TspRI	CASTG	4 cut(s)	1390, 1413, 2092, 2116
Tth111I	GACNNNGTC	1 cut(s)	1369
Van91I	CCANNNNNTGG	1 cut(s)	2177
VpaK11BI	GGWCC	7 cut(s)	228, 454, 465, 520, 1919, 2167, 2180
VspI	ATTAAT	1 cut(s)	1749
XapI	RAATTY	1 cut(s)	741
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2113
XhoI	CTCGAG	2 cut(s)	862, 1336
XmiI	GTMKAC	2 cut(s)	321, 2225
XmnI	GAANNNNTTC	1 cut(s)	697
XspI	CTAG	4 cut(s)	537, 903, 1251, 2343
ZraI	GACGTC	1 cut(s)	813
ZrmI	AGTACT	2 cut(s)	541, 1988
Zsp2I	ATGCAT	1 cut(s)	2238

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.