Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0003366

Physical Location & Seq

Genomic Coordinates Forward (+)

7709554 .. 7711925

Gene Structure 2372 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00286710.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2034 bp

ATGACGAAACTACCCTTCTCCGTTCTCATTACCATCCTCACCTTCATCTTCACCATTTTGTTCACCCTCCCATTTTCCCATGCACTCGGCTCCGGCGCCACTCTCGCCGTCAGCTACGCCACCGGCGCCGTCTGCGGCTTGGTCTCCGGCCAACCCACTCAGCGCATAGTCTGCTACCGGCGAGGCCAAACCATCTCCGTCGAGCCCAACATCTCCTTCTCGTCAATCTCCGGCGGCCGGACCTCCCTGTGCGGCCTCCGGTCCGGCGGCTACGCCCTGCTCTGTTACGACAATCTACTCTTCCAAGACTCGGCCTTTGATTCGAAAAGAATCTACTTTAACGAAAGTGGTGAATTGGAAAACATAGCCGTCGGAGAAAACCATATTTGCGCCACCGTGGTGGGTTCGGGCGCCGTGAAATGTTGGCGAGAAGAGGACGGAACGTTTCAACTGCCATCTGGGTCGGAGCAATTCGGGTCCATCTCATCTGGGTCGGGCTTCTCCTGTGGAATTTCGAAGAACAGCTCGAGGGTCCGGTGCTGGGGGACTAGAACTTCCATGGCGGCCGAGATTGAAAATGGGTTTGGAGAAACGGTCATGGCGAGTATCGAAGCAGGTGCTTATCACGTGTGTGGAGTCAATGTTACTGGGTCAATAATCTGCAGAGGCAGCAACGACTCTGGTCAATTGAATGCACCGCCGGGAACGTTTTCCGGTTTAGCTCTCGGAGCTGAACACAGCTGTGCGATTAGAGATTTAAACCAGTCTGTGATTTGTTGGGGCGGTGGAGGCCAGTTTGGGCCTAATGTGACTTCAGCGACGTCGTTTGAGGTGATCGTTTCCGGGTCTAATTTCACTTGTGGATTAACCACAAGCAACTTTTCGATTATATGTTGGGGTCCTGGTTGGCCTAGTTCAGAGGTTGAAGGTGAGCTTGGTCTGGGGAGATTCTTCCGGGTCGTTGTCCCTCCTTCGAGATCAGCCACCATAAGGCGGCAGAGCTCGAGGATCATGAGGCGGCAGAGGAGTGGGCCTTCGTCCAAGCACACAGATAGGGCTGAGGAGTTCTCACTGGCTGAGCTTGCAGCAGCTACAAATGGTTTTGCATTGGAGAACAAGATTGGTGCAGGGAGCTTTGGGGTGGTGTACAGAGGGAAATTGGATGACGGGCGCGAAGTTGCTATCAAGAGAGGAGAAACAGCAACCAAGGTGAAGAAGTACCAAGAGAAGGATACTGCTTTCGATTCAGAGTTGTCATTCTTGTCGAGGCTTCATCACAAGCATTTGGTTAGTCTTGTTGGGTATTGTGAGGAGAAGGAGGAGAGGCTGTTGGTTTATGAGTACATGAAGAATGGTGCGCTCCATGATCATTTACATGACAAGAACAATGTCGAGAAGAGTAGTAGTTTGATTAATTCTTGGAAAATGAGGATCAAGGTGGCCTTAGATGCTGCCAGAGGCATTGAGTATCTACACAACTATGCAGTCCCTCCTATAATTCACAGAGATATAAAGTCCTCTAACATTCTGATAGATGGAAATTGGACTGGAAGAGTATCTGATTTCGGATTGTCACTATTGGGTCCGGAAAATGACAGCGACTATAGGCCAATGAAGGCAGCTGGAACCGTCGGCTACATTGATCCAGAGTACTATGGTTTAAATTTATTAACAGCAAAGAGTGATGTGTATGGGCTTGGTGTGGTGTTGTTGGAGCTTCTGACAGGAAGAAGAGCAATCTTCAGGAACAGTGAAGACGGAGGGACACCTACCAGTGTTGTGGACTTCACTGTGCCGCTCATCATGGCCGGAGAGTTAGATAAGGTTTTGGACCCAAGGGTTGGACCTCCGGAAATCAGTGAAGCAGAGGCGGTTGAGTTGGTGGCGTATACTGCAATGCATTGTGTGAATTTGGAAGGTAAAGATAGACCAACCATGACTGACATTGTGGCCAATTTGGAGCGAGCATTGAGTCTCTGTGAGGAAAGCCCCGGTGGCAGCATGTCTAGCGGCTCAATCATCTCTGCTGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0042802 GO:0042803 GO:0046983

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05169 map04010 map04064 map04620 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05169

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr RCC1_2

Protein Analysis

677

Amino Acids

72.79

Weight (kDa)

5.79

Isoelectric Point (pI)

41.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	369 - 650	1.5e-42	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	370 - 652	2.2e-40	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003366)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55950
fragaria_vesca	FvH4_3g38710 FvH4_7g24490
malus_domestica	MD00G1166500.v1.1 MD01G1153100.v1.1 MD03G1068800.v1.1 MD07G1222100.v1.1 MD11G1073300.v1.1
prunus_persica	Prupe.2G250300_v2.0.a1 Prupe.6G056600_v2.0.a1
pyrus_communis	pycom01g17070 pycom03g05510
rosa_chinensis	RchiOBHm_Chr1g0370251 RchiOBHm_Chr5g0065501 RchiOBHm_Chr5g0069861
rosa_laevigata	RLG00000027065 RLG00000036103
rosa_multiflora	Rmu_co8321277.1_g000001 Rmu_sc0000738.1_g000002 Rmu_sc0026893.1_g000001 Rmu_sc0037931.1_g000001
rosa_roxburghii	Rroxscaffold_1G00011190 Rroxscaffold_4G00286710 Rroxscaffold_4G00287300
rosa_rugosa	Rorug01G0355200 Rorug05G0400300
rosa_samantha	Rh1AG363800 Rh1BG326900 Rh1CG340200 Rh1DG357300 Rh5AG457400 Rh5BG476200 Rh5CG500000 Rh5DG488000
rosa_wichuraiana	Rw1G032010 Rw5G042700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	605
AatII	GACGTC	1 cut(s)	824
Acc36I	ACCTGC	1 cut(s)	605
AccB1I	GGYRCC	3 cut(s)	95, 125, 410
AccB7I	CCANNNNNTGG	1 cut(s)	1841
AccBSI	CCGCTC	1 cut(s)	1798
AccI	GTMKAC	1 cut(s)	1889
AccII	CGCG	1 cut(s)	1173
AccIII	TCCGGA	2 cut(s)	1585, 1849
AclI	AACGTT	2 cut(s)	443, 707
AclWI	GGATC	3 cut(s)	1016, 1439, 1637
AcoI	YGGCCR	5 cut(s)	148, 235, 564, 1806, 1950
AcsI	RAATTY	3 cut(s)	510, 1663, 1909
AcuI	CTGAAG	2 cut(s)	798, 1726
AcvI	CACGTG	1 cut(s)	628
AcyI	GRCGYC	4 cut(s)	96, 126, 411, 821
AfaI	GTAC	4 cut(s)	1148, 1220, 1343, 1652
AfiI	CCNNNNNNNGG	7 cut(s)	237, 310, 541, 990, 993, 1228, 1841
AflIII	ACRYGT	1 cut(s)	627
AgsI	TTSAA	4 cut(s)	449, 575, 691, 926
AjnI	CCWGG	1 cut(s)	901
AjuI	GAANNNNNNNTTGG	6 cut(s)	200, 232, 567, 599, 918, 950
AleI	CACNNNNGTG	3 cut(s)	398, 630, 741
Alw21I	GWGCWC	1 cut(s)	1004
Alw26I	GTCTC	2 cut(s)	148, 1979
AlwI	GGATC	3 cut(s)	1016, 1439, 1637
Ama87I	CYCGRG	2 cut(s)	526, 1003
Aor13HI	TCCGGA	2 cut(s)	1585, 1849
ApeKI	GCWGC	6 cut(s)	669, 1085, 1088, 1451, 1619, 1998
ApoI	RAATTY	3 cut(s)	510, 1663, 1909
ArsI	GACNNNNNNTTYG	2 cut(s)	299, 331
AseI	ATTAAT	1 cut(s)	1413
Asp700I	GAANNNNTTC	1 cut(s)	709
AspLEI	GCGC	7 cut(s)	98, 128, 165, 392, 413, 1173, 1360
AsuC2I	CCSGG	4 cut(s)	702, 844, 956, 1992
AsuHPI	GGTGA	7 cut(s)	31, 43, 55, 362, 844, 941, 1222
AsuII	TTCGAA	2 cut(s)	323, 515
AvaI	CYCGRG	2 cut(s)	526, 1003
AvaII	GGWCC	8 cut(s)	240, 261, 477, 532, 899, 1583, 1831, 1844
BalI	TGGCCA	1 cut(s)	1952
BanI	GGYRCC	3 cut(s)	95, 125, 410
BanII	GRGCYC	2 cut(s)	207, 1004
BbrPI	CACGTG	1 cut(s)	628
BbsI	GAAGAC	1 cut(s)	1761
Bbv12I	GWGCWC	1 cut(s)	1004
BbvCI	CCTCAGC	1 cut(s)	1059
BbvI	GCAGC	6 cut(s)	681, 1097, 1100, 1438, 1631, 2010
BccI	CCATC	5 cut(s)	41, 200, 463, 488, 1529
BceAI	ACGGC	4 cut(s)	92, 113, 353, 398
BcgI	CGANNNNNNTGC	2 cut(s)	599, 633
BciT130I	CCWGG	1 cut(s)	903
BciVI	GTATCC	1 cut(s)	1225
BclI	TGATCA	1 cut(s)	1366
BcnI	CCSGG	4 cut(s)	702, 844, 956, 1992
BcoDI	GTCTC	2 cut(s)	148, 1979
BfaI	CTAG	3 cut(s)	549, 912, 2007
BfmI	CTRYAG	2 cut(s)	661, 1603
BfoI	RGCGCY	3 cut(s)	99, 129, 414
BfuAI	ACCTGC	1 cut(s)	605
BfuI	GTATCC	1 cut(s)	1225
BglI	GCCNNNNNGGC	1 cut(s)	1995
BlpI	GCTNAGC	1 cut(s)	1077
BmcAI	AGTACT	1 cut(s)	1652
Bme1390I	CCNGG	5 cut(s)	702, 844, 903, 956, 1992
Bme18I	GGWCC	8 cut(s)	240, 261, 477, 532, 899, 1583, 1831, 1844
BmeT110I	CYCGRG	2 cut(s)	526, 1003
BmrFI	CCNGG	5 cut(s)	702, 844, 903, 956, 1992
BmrI	ACTGGG	1 cut(s)	657
BmsI	GCATC	1 cut(s)	1438
BmuI	ACTGGG	1 cut(s)	657
BoxI	GACNNNNGTC	1 cut(s)	681
BpiI	GAAGAC	1 cut(s)	1761
BplI	GAGNNNNNCTC	2 cut(s)	1052, 1084
Bpu10I	CCTNAGC	1 cut(s)	1059
Bpu1102I	GCTNAGC	1 cut(s)	1077
Bpu14I	TTCGAA	2 cut(s)	323, 515
BpuMI	CCSGG	4 cut(s)	702, 844, 956, 1992
BsaAI	YACGTR	1 cut(s)	628
BsaHI	GRCGYC	4 cut(s)	96, 126, 411, 821
BsaI	GGTCTC	1 cut(s)	148
BsaJI	CCNNGG	5 cut(s)	396, 558, 1206, 1835, 1990
BsaWI	WCCGGW	5 cut(s)	258, 534, 713, 1585, 1849
BsaXI	ACNNNNNCTCC	6 cut(s)	579, 609, 627, 657, 1313, 1343
Bsc4I	CCNNNNNNNGG	7 cut(s)	237, 310, 541, 990, 993, 1228, 1841
Bse118I	RCCGGY	2 cut(s)	122, 177
Bse1I	ACTGG	6 cut(s)	652, 763, 793, 1077, 1552, 1773
Bse3DI	GCAATG	1 cut(s)	1902
BseAI	TCCGGA	2 cut(s)	1585, 1849
BseBI	CCWGG	1 cut(s)	903
BseDI	CCNNGG	5 cut(s)	396, 558, 1206, 1835, 1990
BseGI	GGATG	2 cut(s)	33, 1168
BseLI	CCNNNNNNNGG	7 cut(s)	237, 310, 541, 990, 993, 1228, 1841
BseMI	GCAATG	1 cut(s)	1902
BseMII	CTCAG	3 cut(s)	173, 1050, 1068
BseNI	ACTGG	6 cut(s)	652, 763, 793, 1077, 1552, 1773
BseRI	GAGGAG	5 cut(s)	1039, 1076, 1206, 1325, 1334
BseX3I	CGGCCG	2 cut(s)	235, 564
BseXI	GCAGC	6 cut(s)	681, 1097, 1100, 1438, 1631, 2010
BseYI	CCCAGC	1 cut(s)	540
BsgI	GTGCAG	1 cut(s)	1146
Bsh1236I	CGCG	1 cut(s)	1173
Bsh1285I	CGRYCG	2 cut(s)	238, 567
BshNI	GGYRCC	3 cut(s)	95, 125, 410
BsiEI	CGRYCG	2 cut(s)	238, 567
BsiHKAI	GWGCWC	1 cut(s)	1004
BsiHKCI	CYCGRG	2 cut(s)	526, 1003
BslFI	GGGAC	4 cut(s)	559, 950, 1472, 1777
BslI	CCNNNNNNNGG	7 cut(s)	237, 310, 541, 990, 993, 1228, 1841
BsmAI	GTCTC	2 cut(s)	148, 1979
BsmFI	GGGAC	4 cut(s)	559, 950, 1472, 1777
BsmI	GAATGC	1 cut(s)	697
Bso31I	GGTCTC	1 cut(s)	148
BsoBI	CYCGRG	2 cut(s)	526, 1003
Bsp119I	TTCGAA	2 cut(s)	323, 515
Bsp1286I	GDGCHC	2 cut(s)	207, 1004
Bsp13I	TCCGGA	2 cut(s)	1585, 1849
Bsp1407I	TGTACA	1 cut(s)	1146
Bsp143I	GATC	6 cut(s)	834, 977, 1008, 1366, 1431, 1642
Bsp1720I	GCTNAGC	1 cut(s)	1077
Bsp19I	CCATGG	1 cut(s)	558
BspCNI	CTCAG	3 cut(s)	172, 1051, 1069
BspEI	TCCGGA	2 cut(s)	1585, 1849
BspFNI	CGCG	1 cut(s)	1173
BspHI	TCATGA	1 cut(s)	1011
BspMAI	CTGCAG	1 cut(s)	665
BspMI	ACCTGC	1 cut(s)	605
BspPI	GGATC	3 cut(s)	1016, 1439, 1637
BspQI	GCTCTTC	1 cut(s)	1726
BspT104I	TTCGAA	2 cut(s)	323, 515
BspT107I	GGYRCC	3 cut(s)	95, 125, 410
BspTNI	GGTCTC	1 cut(s)	148
BsrBI	CCGCTC	1 cut(s)	1798
BsrDI	GCAATG	1 cut(s)	1902
BsrFI	RCCGGY	2 cut(s)	122, 177
BsrGI	TGTACA	1 cut(s)	1146
BsrI	ACTGG	6 cut(s)	652, 763, 793, 1077, 1552, 1773
BssAI	RCCGGY	2 cut(s)	122, 177
BssECI	CCNNGG	5 cut(s)	396, 558, 1206, 1835, 1990
BssMI	GATC	6 cut(s)	834, 977, 1008, 1366, 1431, 1642
BssNAI	GTATAC	1 cut(s)	1890
BssNI	GRCGYC	4 cut(s)	96, 126, 411, 821
BssT1I	CCWWGG	3 cut(s)	558, 1206, 1835
Bst1107I	GTATAC	1 cut(s)	1890
Bst2UI	CCWGG	1 cut(s)	903
Bst4CI	ACNGT	5 cut(s)	397, 595, 1630, 1751, 1792
Bst6I	CTCTTC	5 cut(s)	305, 426, 1391, 1546, 1726
BstACI	GRCGYC	4 cut(s)	96, 126, 411, 821
BstAPI	GCANNNNNTGC	1 cut(s)	171
BstAUI	TGTACA	1 cut(s)	1146
BstBAI	YACGTR	1 cut(s)	628
BstBI	TTCGAA	2 cut(s)	323, 515
BstC8I	GCNNGC	2 cut(s)	1083, 1965
BstDEI	CTNAG	4 cut(s)	159, 1059, 1077, 1444
BstDSI	CCRYGG	2 cut(s)	396, 558
BstF5I	GGATG	2 cut(s)	33, 1168
BstFNI	CGCG	1 cut(s)	1173
BstH2I	RGCGCY	3 cut(s)	99, 129, 414
BstHHI	GCGC	7 cut(s)	98, 128, 165, 392, 413, 1173, 1360
BstKTI	GATC	6 cut(s)	837, 980, 1011, 1369, 1434, 1645
BstMAI	GTCTC	2 cut(s)	148, 1979
BstMBI	GATC	6 cut(s)	834, 977, 1008, 1366, 1431, 1642
BstMCI	CGRYCG	2 cut(s)	238, 567
BstNI	CCWGG	1 cut(s)	903
BstNSI	RCATGY	1 cut(s)	2005
BstPAI	GACNNNNGTC	1 cut(s)	681
BstSCI	CCNGG	5 cut(s)	700, 842, 901, 954, 1990
BstSFI	CTRYAG	2 cut(s)	661, 1603
BstUI	CGCG	1 cut(s)	1173
BstV1I	GCAGC	6 cut(s)	681, 1097, 1100, 1438, 1631, 2010
BstV2I	GAAGAC	1 cut(s)	1761
BstXI	CCANNNNNNTGG	2 cut(s)	400, 1780
BstZ17I	GTATAC	1 cut(s)	1890
BstZI	CGGCCG	2 cut(s)	235, 564
BsuI	GTATCC	1 cut(s)	1225
BtgI	CCRYGG	2 cut(s)	396, 558
BtsCI	GGATG	2 cut(s)	33, 1168
BtsIMutI	CAGTG	5 cut(s)	1070, 1756, 1780, 1788, 1864
BveI	ACCTGC	1 cut(s)	605
Cac8I	GCNNGC	2 cut(s)	1083, 1965
CciI	TCATGA	1 cut(s)	1011
CfoI	GCGC	7 cut(s)	98, 128, 165, 392, 413, 1173, 1360
Cfr10I	RCCGGY	2 cut(s)	122, 177
CpoI	CGGWCCG	1 cut(s)	261
Csp6I	GTAC	4 cut(s)	1147, 1219, 1342, 1651
CspI	CGGWCCG	1 cut(s)	261
CviQI	GTAC	4 cut(s)	1147, 1219, 1342, 1651
DdeI	CTNAG	4 cut(s)	159, 1059, 1077, 1444
DinI	GGCGCC	3 cut(s)	97, 127, 412
DpnI	GATC	6 cut(s)	836, 979, 1010, 1368, 1433, 1644
DpnII	GATC	6 cut(s)	834, 977, 1008, 1366, 1431, 1642
DraI	TTTAAA	2 cut(s)	759, 1662
EaeI	YGGCCR	5 cut(s)	148, 235, 564, 1806, 1950
EagI	CGGCCG	2 cut(s)	235, 564
Eam1104I	CTCTTC	5 cut(s)	305, 426, 1391, 1546, 1726
EarI	CTCTTC	5 cut(s)	305, 426, 1391, 1546, 1726
Ecl136II	GAGCTC	1 cut(s)	1002
EclXI	CGGCCG	2 cut(s)	235, 564
Eco130I	CCWWGG	3 cut(s)	558, 1206, 1835
Eco24I	GRGCYC	2 cut(s)	207, 1004
Eco31I	GGTCTC	1 cut(s)	148
Eco47I	GGWCC	8 cut(s)	240, 261, 477, 532, 899, 1583, 1831, 1844
Eco52I	CGGCCG	2 cut(s)	235, 564
Eco53kI	GAGCTC	1 cut(s)	1002
Eco57I	CTGAAG	2 cut(s)	798, 1726
Eco72I	CACGTG	1 cut(s)	628
Eco88I	CYCGRG	2 cut(s)	526, 1003
EcoICRI	GAGCTC	1 cut(s)	1002
EcoO109I	RGGNCCY	1 cut(s)	899
EcoRII	CCWGG	1 cut(s)	901
EcoT14I	CCWWGG	3 cut(s)	558, 1206, 1835
EcoT22I	ATGCAT	1 cut(s)	1902
EcoT38I	GRGCYC	2 cut(s)	207, 1004
EgeI	GGCGCC	3 cut(s)	97, 127, 412
EheI	GGCGCC	3 cut(s)	97, 127, 412
ErhI	CCWWGG	3 cut(s)	558, 1206, 1835
FalI	AAGNNNNNCTT	4 cut(s)	918, 950, 1427, 1459
FaqI	GGGAC	4 cut(s)	559, 950, 1472, 1777
FbaI	TGATCA	1 cut(s)	1366
FblI	GTMKAC	1 cut(s)	1889
FokI	GGATG	2 cut(s)	20, 1175
FriOI	GRGCYC	2 cut(s)	207, 1004
FspBI	CTAG	3 cut(s)	549, 912, 2007
GlaI	GCGC	7 cut(s)	97, 127, 164, 391, 412, 1172, 1359
GsaI	CCCAGC	1 cut(s)	544
HaeII	RGCGCY	3 cut(s)	99, 129, 414
HhaI	GCGC	7 cut(s)	98, 128, 165, 392, 413, 1173, 1360
Hin1I	GRCGYC	4 cut(s)	96, 126, 411, 821
Hin6I	GCGC	7 cut(s)	96, 126, 163, 390, 411, 1171, 1358
HinP1I	GCGC	7 cut(s)	96, 126, 163, 390, 411, 1171, 1358
HinfI	GANTC	8 cut(s)	308, 320, 330, 636, 677, 948, 1244, 1972
HphI	GGTGA	7 cut(s)	31, 43, 55, 362, 844, 941, 1222
Hpy166II	GTNNAC	4 cut(s)	63, 1147, 1783, 1890
Hpy188I	TCNGA	9 cut(s)	374, 466, 728, 919, 1249, 1530, 1561, 1568, 1722
Hpy188III	TCNNGA	8 cut(s)	975, 1012, 1186, 1393, 1586, 1646, 1744, 1850
Hpy8I	GTNNAC	4 cut(s)	63, 1147, 1783, 1890
Hpy99I	CGWCG	5 cut(s)	203, 374, 823, 826, 1634
HpyCH4III	ACNGT	5 cut(s)	397, 595, 1630, 1751, 1792
HpyCH4IV	ACGT	4 cut(s)	443, 627, 707, 821
HpyCH4V	TGCA	9 cut(s)	83, 663, 695, 1085, 1106, 1127, 1484, 1895, 1900
HpyF3I	CTNAG	4 cut(s)	159, 1059, 1077, 1444
HpySE526I	ACGT	4 cut(s)	443, 627, 707, 821
Hsp92I	GRCGYC	4 cut(s)	96, 126, 411, 821
HspAI	GCGC	7 cut(s)	96, 126, 163, 390, 411, 1171, 1358
KasI	GGCGCC	3 cut(s)	95, 125, 410
Kpn2I	TCCGGA	2 cut(s)	1585, 1849
Ksp22I	TGATCA	1 cut(s)	1366
Kzo9I	GATC	6 cut(s)	834, 977, 1008, 1366, 1431, 1642
LguI	GCTCTTC	1 cut(s)	1726
LmnI	GCTCC	7 cut(s)	95, 466, 728, 1131, 1365, 1714, 1960
Lsp1109I	GCAGC	6 cut(s)	681, 1097, 1100, 1438, 1631, 2010
LweI	GCATC	1 cut(s)	1438
MaeI	CTAG	3 cut(s)	549, 912, 2007
MaeII	ACGT	4 cut(s)	443, 627, 707, 821
MaeIII	GTNAC	4 cut(s)	284, 643, 808, 1572
MalI	GATC	6 cut(s)	836, 979, 1010, 1368, 1433, 1644
MbiI	CCGCTC	1 cut(s)	1798
MboI	GATC	6 cut(s)	834, 977, 1008, 1366, 1431, 1642
MfeI	CAATTG	1 cut(s)	686
MhlI	GDGCHC	2 cut(s)	207, 1004
MlsI	TGGCCA	1 cut(s)	1952
MluNI	TGGCCA	1 cut(s)	1952
Mly113I	GGCGCC	3 cut(s)	96, 126, 411
MlyI	GAGTC	4 cut(s)	302, 645, 671, 1981
MmeI	TCCRAC	4 cut(s)	352, 444, 1692, 1822
Mox20I	TGGCCA	1 cut(s)	1952
Mph1103I	ATGCAT	1 cut(s)	1902
MroI	TCCGGA	2 cut(s)	1585, 1849
MroXI	GAANNNNTTC	1 cut(s)	709
MscI	TGGCCA	1 cut(s)	1952
MseI	TTAA	6 cut(s)	339, 758, 866, 1413, 1661, 1670
MslI	CAYNNNNRTG	5 cut(s)	398, 630, 741, 1374, 1479
Msp20I	TGGCCA	1 cut(s)	1952
MspA1I	CMGCKG	2 cut(s)	741, 1622
MspR9I	CCNGG	5 cut(s)	702, 844, 903, 956, 1992
MunI	CAATTG	1 cut(s)	686
Mva1269I	GAATGC	1 cut(s)	697
MvaI	CCWGG	1 cut(s)	903
MvnI	CGCG	1 cut(s)	1173
NarI	GGCGCC	3 cut(s)	96, 126, 411
NciI	CCSGG	4 cut(s)	702, 844, 956, 1992
NcoI	CCATGG	1 cut(s)	558
NdeII	GATC	6 cut(s)	834, 977, 1008, 1366, 1431, 1642
NmeAIII	GCCGAG	3 cut(s)	66, 290, 592
NmuCI	GTSAC	2 cut(s)	808, 1572
NsiI	ATGCAT	1 cut(s)	1902
NspI	RCATGY	1 cut(s)	2005
NspV	TTCGAA	2 cut(s)	323, 515
OliI	CACNNNNGTG	3 cut(s)	398, 630, 741
PaeR7I	CTCGAG	2 cut(s)	526, 1003
PagI	TCATGA	1 cut(s)	1011
PaqCI	CACCTGC	1 cut(s)	605
PciSI	GCTCTTC	1 cut(s)	1726
PcsI	WCGNNNNNNNCGW	1 cut(s)	599
PctI	GAATGC	1 cut(s)	697
PdmI	GAANNNNTTC	1 cut(s)	709
PfeI	GAWTC	4 cut(s)	320, 330, 948, 1244
PflMI	CCANNNNNTGG	1 cut(s)	1841
PleI	GAGTC	4 cut(s)	302, 644, 671, 1980
PluTI	GGCGCC	3 cut(s)	99, 129, 414
PmaCI	CACGTG	1 cut(s)	628
PmlI	CACGTG	1 cut(s)	628
PpsI	GAGTC	4 cut(s)	302, 644, 671, 1980
Ppu21I	YACGTR	1 cut(s)	628
PpuMI	RGGWCCY	1 cut(s)	899
PshAI	GACNNNNGTC	1 cut(s)	681
PshBI	ATTAAT	1 cut(s)	1413
Psp124BI	GAGCTC	1 cut(s)	1004
Psp1406I	AACGTT	2 cut(s)	443, 707
Psp5II	RGGWCCY	1 cut(s)	899
Psp6I	CCWGG	1 cut(s)	901
PspCI	CACGTG	1 cut(s)	628
PspFI	CCCAGC	1 cut(s)	540
PspGI	CCWGG	1 cut(s)	901
PspPPI	RGGWCCY	1 cut(s)	899
PspXI	VCTCGAGB	2 cut(s)	526, 1003
PstI	CTGCAG	1 cut(s)	665
PvuII	CAGCTG	2 cut(s)	741, 1622
RsaI	GTAC	4 cut(s)	1148, 1220, 1343, 1652
RsaNI	GTAC	4 cut(s)	1147, 1219, 1342, 1651
RseI	CAYNNNNRTG	5 cut(s)	398, 630, 741, 1374, 1479
Rsr2I	CGGWCCG	1 cut(s)	261
RsrII	CGGWCCG	1 cut(s)	261
SacI	GAGCTC	1 cut(s)	1004
SapI	GCTCTTC	1 cut(s)	1726
SaqAI	TTAA	6 cut(s)	339, 758, 866, 1413, 1661, 1670
Sau3AI	GATC	6 cut(s)	834, 977, 1008, 1366, 1431, 1642
ScaI	AGTACT	1 cut(s)	1652
SchI	GAGTC	4 cut(s)	302, 645, 671, 1981
ScrFI	CCNGG	5 cut(s)	702, 844, 903, 956, 1992
SduI	GDGCHC	2 cut(s)	207, 1004
SfaNI	GCATC	1 cut(s)	1438
SfcI	CTRYAG	2 cut(s)	661, 1603
SfoI	GGCGCC	3 cut(s)	97, 127, 412
Sfr274I	CTCGAG	2 cut(s)	526, 1003
SfuI	TTCGAA	2 cut(s)	323, 515
SgrAI	CRCCGGYG	1 cut(s)	122
SinI	GGWCC	8 cut(s)	240, 261, 477, 532, 899, 1583, 1831, 1844
SlaI	CTCGAG	2 cut(s)	526, 1003
SmiMI	CAYNNNNRTG	5 cut(s)	398, 630, 741, 1374, 1479
SmlI	CTYRAG	2 cut(s)	526, 1003
SmoI	CTYRAG	2 cut(s)	526, 1003
SspDI	GGCGCC	3 cut(s)	95, 125, 410
SspMI	CTAG	3 cut(s)	549, 912, 2007
SstI	GAGCTC	1 cut(s)	1004
StyD4I	CCNGG	5 cut(s)	700, 842, 901, 954, 1990
StyI	CCWWGG	3 cut(s)	558, 1206, 1835
TaaI	ACNGT	5 cut(s)	397, 595, 1630, 1751, 1792
TaiI	ACGT	4 cut(s)	446, 630, 710, 824
TatI	WGTACW	3 cut(s)	1146, 1341, 1650
TauI	GCSGC	9 cut(s)	138, 237, 255, 270, 566, 997, 1021, 1798, 2013
TfiI	GAWTC	4 cut(s)	320, 330, 948, 1244
Tru1I	TTAA	6 cut(s)	339, 758, 866, 1413, 1661, 1670
Tru9I	TTAA	6 cut(s)	339, 758, 866, 1413, 1661, 1670
TscAI	CASTG	5 cut(s)	1077, 1756, 1780, 1795, 1864
TseFI	GTSAC	2 cut(s)	808, 1572
TseI	GCWGC	6 cut(s)	669, 1085, 1088, 1451, 1619, 1998
Tsp45I	GTSAC	2 cut(s)	808, 1572
TspDTI	ATGAA	4 cut(s)	34, 1262, 1361, 1628
TspGWI	ACGGA	4 cut(s)	10, 187, 453, 1773
TspRI	CASTG	5 cut(s)	1077, 1756, 1780, 1795, 1864
Van91I	CCANNNNNTGG	1 cut(s)	1841
VpaK11BI	GGWCC	8 cut(s)	240, 261, 477, 532, 899, 1583, 1831, 1844
VspI	ATTAAT	1 cut(s)	1413
XapI	RAATTY	3 cut(s)	510, 1663, 1909
XceI	RCATGY	1 cut(s)	2005
XhoI	CTCGAG	2 cut(s)	526, 1003
XmiI	GTMKAC	1 cut(s)	1889
XmnI	GAANNNNTTC	1 cut(s)	709
XspI	CTAG	3 cut(s)	549, 912, 2007
ZraI	GACGTC	1 cut(s)	822
ZrmI	AGTACT	1 cut(s)	1652
Zsp2I	ATGCAT	1 cut(s)	1902

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.