AT3G60030

Squamosa promoter-binding-like protein 1

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
22165580 .. 22169984
4405 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G60030.1

Sequence Viewer

Length: 2784 bp
ATGGAAGCTAGAATTGAAGGTGAAGTAGAAGGTCACAGTTTAGAATACGGGTTTAGTGGTAAAAGGAGTGTAGAGTGGGATTTGAATGATTGGAAATGGAATGGTGATCTCTTCGTTGCTACACAGCTGAATCACGGCTCATCCAACAGCTCTTCTACGTGCTCTGATGAAGGAAATGTTGAAATCATGGAGAGAAGGAGGATAGAGATGGAGAAGAAGAAGAAAAGAAGAGCTGTTACTGTGGTAGCAATGGAAGAAGATAACTTGAAAGATGATGATGCTCATAGACTTACTCTGAATCTTGGTGGTAATAATATTGAGGGGAATGGTGTGAAAAAGACGAAACTTGGAGGAGGGATTCCGAGTCGGGCGATTTGTTGTCAGGTAGACAACTGTGGAGCTGATTTAAGCAAAGTTAAGGATTATCATAGACGTCATAAGGTCTGTGAGATTCATTCTAAAGCTACTACTGCACTTGTTGGAGGAATTATGCAGCGGTTTTGTCAGCAATGTAGTAGGTTTCATGTGCTTGAAGAGTTTGATGAGGGAAAGAGAAGTTGCCGTAGACGTTTGGCTGGGCATAATAAGCGTAGAAGAAAAGCAAATCCTGATACTATAGGCAATGGGACTTCTATGAGTGATGATCAAACAAGCAATTATATGTTGATTACTCTCTTGAAGATACTCTCCAATATTCATTCGAATCAGTCGGATCAAACGGGTGATCAGGATCTACTGTCTCATCTTCTAAAGAGCCTTGTAAGCCAAGCTGGTGAACATATAGGGAGGAATTTAGTTGGGCTTCTACAGGGTGGAGGAGGACTCCAGGCTTCTCAAAATATTGGAAACTTATCCGCTTTGCTCTCACTCGAGCAAGCCCCTCGAGAGGATATAAAACATCATTCAGTGTCTGAAACGCCTTGGCAAGAAGTGTATGCCAATAGTGCTCAAGAGAGAGTTGCCCCGGATAGGTCCGAGAAACAAGTCAAAGTGAATGATTTTGATTTGAATGACATCTACATAGACTCAGATGATACCACAGATATAGAGAGATCATCACCTCCTCCGACAAATCCAGCTACTAGTTCTCTTGATTATCATCAAGACTCGCGTCAGTCTAGTCCACCTCAAACTAGTAGGAGGAATTCAGATTCAGCTTCTGACCAATCACCTTCAAGTTCCAGTGGAGATGCACAGAGCCGTACTGATCGGATTGTGTTCAAACTCTTTGGGAAAGAGCCGAATGATTTTCCAGTTGCCTTACGAGGACAGATTCTTAACTGGTTAGCGCATACTCCAACTGATATGGAGAGCTACATTAGACCTGGTTGTATCGTTTTGACCATTTATCTTCGTCAAGATGAAGCTTCTTGGGAAGAACTTTGTTGTGATCTGAGTTTCAGCTTGAGGAGGCTTCTAGATCTTTCAGATGATCCTTTATGGACTGATGGGTGGCTTTATCTTAGGGTGCAAAACCAACTCGCATTTGCGTTTAATGGTCAGGTTGTTCTTGACACATCTTTACCTCTGAGAAGCCATGATTATAGCCAAATCATTACTGTTAGACCACTTGCTGTAACAAAGAAAGCTCAATTTACAGTAAAAGGCATCAATCTCCGTCGACCTGGCACAAGGTTACTTTGTACTGTTGAAGGAACACACTTGGTTCAGGAAGCAACACAAGGAGGGATGGAGGAGAGAGATGATCTAAAGGAGAATAATGAGATTGATTTTGTCAATTTTTCCTGTGAGATGCCTATTGCAAGTGGTCGAGGTTTCATGGAAATTGAAGACCAAGGTGGGCTAAGCAGTAGTTTCTTCCCTTTCATAGTATCTGAAGACGAAGATATTTGTTCTGAAATCCGAAGACTCGAAAGCACATTAGAGTTTACTGGAACTGATTCTGCAATGCAAGCAATGGATTTCATCCACGAAATCGGTTGGCTTCTACACAGAAGTGAACTCAAGTCAAGACTTGCAGCATCAGATCATAATCCAGAGGATCTGTTTTCTTTAATACGGTTTAAGTTTCTAATAGAGTTCTCAATGGACCGGGAATGGTGCTGTGTGATGAAGAAGTTATTGAATATTCTATTCGAAGAAGGCACTGTTGATCCATCTCCTGATGCTGCGTTATCAGAACTGTGTCTTCTTCACAGAGCCGTGAGGAAAAATTCAAAACCCATGGTTGAGATGCTTCTTAGATTCAGTCCCAAGAAGAAGAATCAGACATTAGCCGGTTTGTTTAGACCCGATGCAGCTGGTCCAGGCGGTTTAACACCGCTTCACATTGCAGCTGGTAAAGACGGTTCAGAAGATGTGTTGGATGCCCTGACTGAGGATCCTGGAATGACTGGTATTCAAGCCTGGAAAAATTCCCGGGACAATACCGGATTCACACCAGAAGACTATGCACGTTTACGAGGTCACTTCTCGTATATTCATCTGGTGCAACGGAAACTCAGTCGGAAACCAATCGCCAAAGAACACGTGGTGGTCAACATTCCTGAGTCTTTCAACATTGAGCACAAACAAGAAAAGAGGAGTCCAATGGATTCTTCAAGCTTGGAGATAACACAGATAAACCAATGTAAGCTCTGTGATCACAAACGTGTGTTTGTCACAACGCACCACAAGTCTGTTGCCTACAGGCCAGCAATGCTTTCGATGGTAGCGATAGCAGCGGTTTGCGTTTGTGTCGCTCTTTTGTTCAAGAGTTGCCCGGAAGTGCTATATGTCTTTCAGCCATTCAGGTGGGAATTACTTGAGTATGGAACAAGCTAG

Protein Analysis

927

Amino Acids

104.14

Weight (kDa)

5.85

Isoelectric Point (pI)

57.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SBP PF03110 127 - 200 6.6e-32 SBP domain
Ig_SPL7 PF26102 512 - 622 7.7e-31 SPL7-like, immunoglobulin-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 436
AccI GTMKAC 3 cut(s) 387, 565, 1621
AccII CGCG 1 cut(s) 1111
AciI CCGC 5 cut(s) 496, 855, 2271, 2282, 2684
AclWI GGATC 7 cut(s) 720, 738, 1427, 2010, 2108, 2336, 2349
AcsI RAATTY 4 cut(s) 790, 1144, 2173, 2374
AcuI CTGAAG 1 cut(s) 1857
AcvI CACGTG 1 cut(s) 2491
AcyI GRCGYC 1 cut(s) 433
AdeI CACNNNGTG 1 cut(s) 2494
AfaI GTAC 2 cut(s) 1204, 1645
AfiI CCNNNNNNNGG 3 cut(s) 886, 969, 2338
AflIII ACRYGT 2 cut(s) 2488, 2611
AhlI ACTAGT 2 cut(s) 1082, 1133
AjnI CCWGG 6 cut(s) 825, 1324, 1624, 2266, 2344, 2366
AjuI GAANNNNNNNTTGG 2 cut(s) 2542, 2574
AleI CACNNNNGTG 2 cut(s) 1956, 2610
Alw21I GWGCWC 3 cut(s) 164, 949, 2529
Alw26I GTCTC 1 cut(s) 744
AlwI GGATC 7 cut(s) 720, 738, 1427, 2010, 2108, 2336, 2349
AlwNI CAGNNNCTG 2 cut(s) 911, 1160
Ama87I CYCGRG 3 cut(s) 869, 882, 2379
AoxI GGCC 1 cut(s) 2651
ApeKI GCWGC 6 cut(s) 493, 1979, 2129, 2258, 2294, 2681
ApoI RAATTY 4 cut(s) 790, 1144, 2173, 2374
Asp700I GAANNNNTTC 1 cut(s) 1900
AspLEI GCGC 1 cut(s) 1291
AspS9I GGNCC 3 cut(s) 972, 2050, 2264
AsuC2I CCSGG 5 cut(s) 965, 2054, 2380, 2381, 2723
AsuHPI GGTGA 6 cut(s) 32, 116, 734, 785, 1050, 1161
AsuII TTCGAA 2 cut(s) 701, 2097
AvaI CYCGRG 3 cut(s) 869, 882, 2379
AvaII GGWCC 3 cut(s) 972, 2050, 2264
BamHI GGATCC 1 cut(s) 2341
BarI GAAGNNNNNNTAC 2 cut(s) 220, 252
BbrPI CACGTG 1 cut(s) 2491
BbsI GAAGAC 5 cut(s) 1797, 1845, 1873, 2141, 2412
Bbv12I GWGCWC 3 cut(s) 164, 949, 2529
BbvI GCAGC 6 cut(s) 505, 1991, 2116, 2270, 2306, 2693
BccI CCATC 5 cut(s) 202, 1442, 1684, 2125, 2662
BceAI ACGGC 4 cut(s) 151, 546, 1185, 2147
BcgI CGANNNNNNTGC 4 cut(s) 863, 897, 2646, 2680
BciT130I CCWGG 6 cut(s) 827, 1326, 1626, 2268, 2346, 2368
BclI TGATCA 3 cut(s) 643, 724, 2602
BcnI CCSGG 5 cut(s) 965, 2054, 2380, 2381, 2723
BcoDI GTCTC 1 cut(s) 744
BcuI ACTAGT 2 cut(s) 1082, 1133
BfaI CTAG 6 cut(s) 9, 1083, 1119, 1134, 1418, 2782
BfmI CTRYAG 3 cut(s) 615, 806, 2647
BglII AGATCT 1 cut(s) 1420
BisI GCNGC 6 cut(s) 494, 1980, 2130, 2259, 2295, 2682
BlpI GCTNAGC 1 cut(s) 1805
BlsI GCNGC 6 cut(s) 495, 1981, 2131, 2260, 2296, 2683
Bme18I GGWCC 3 cut(s) 972, 2050, 2264
BmeT110I CYCGRG 3 cut(s) 869, 882, 2379
BmgT120I GGNCC 3 cut(s) 972, 2050, 2264
BmiI GGNNCC 1 cut(s) 2343
BmsI GCATC 9 cut(s) 268, 1180, 1617, 1743, 1991, 2116, 2184, 2245, 2317
BoxI GACNNNNGTC 1 cut(s) 1110
BpiI GAAGAC 5 cut(s) 1797, 1845, 1873, 2141, 2412
BplI GAGNNNNNCTC 2 cut(s) 807, 839
BpmI CTGGAG 1 cut(s) 809
Bpu1102I GCTNAGC 1 cut(s) 1805
Bpu14I TTCGAA 2 cut(s) 701, 2097
BpuEI CTTGAG 3 cut(s) 933, 1426, 1949
BpuMI CCSGG 5 cut(s) 965, 2054, 2380, 2381, 2723
BsaAI YACGTR 2 cut(s) 159, 2491
BsaBI GATNNNNATC 3 cut(s) 729, 1098, 1992
BsaHI GRCGYC 1 cut(s) 433
BsaJI CCNNGG 5 cut(s) 920, 963, 1795, 2184, 2379
BsaWI WCCGGW 1 cut(s) 2390
Bsc4I CCNNNNNNNGG 3 cut(s) 886, 969, 2338
Bse118I RCCGGY 1 cut(s) 2237
Bse1I ACTGG 5 cut(s) 1182, 1253, 1286, 1897, 2359
Bse3DI GCAATG 7 cut(s) 255, 515, 628, 1914, 1923, 2289, 2664
Bse8I GATNNNNATC 3 cut(s) 729, 1098, 1992
BseBI CCWGG 6 cut(s) 827, 1326, 1626, 2268, 2346, 2368
BseDI CCNNGG 5 cut(s) 920, 963, 1795, 2184, 2379
BseGI GGATG 4 cut(s) 140, 1695, 1926, 2332
BseJI GATNNNNATC 3 cut(s) 729, 1098, 1992
BseLI CCNNNNNNNGG 3 cut(s) 886, 969, 2338
BseMI GCAATG 7 cut(s) 255, 515, 628, 1914, 1923, 2289, 2664
BseMII CTCAG 6 cut(s) 1041, 1385, 1520, 2328, 2476, 2499
BseNI ACTGG 5 cut(s) 1182, 1253, 1286, 1897, 2359
BseRI GAGGAG 6 cut(s) 366, 831, 1053, 1423, 1709, 2557
BseXI GCAGC 6 cut(s) 505, 1991, 2116, 2270, 2306, 2693
BseYI CCCAGC 1 cut(s) 575
BsgI GTGCAG 1 cut(s) 456
Bsh1236I CGCG 1 cut(s) 1111
BshFI GGCC 1 cut(s) 2653
BsiHKAI GWGCWC 3 cut(s) 164, 949, 2529
BsiHKCI CYCGRG 3 cut(s) 869, 882, 2379
BsiSI CCGG 6 cut(s) 965, 2053, 2238, 2380, 2391, 2723
BslFI GGGAC 3 cut(s) 640, 2196, 2396
BslI CCNNNNNNNGG 3 cut(s) 886, 969, 2338
BsmAI GTCTC 1 cut(s) 744
BsmFI GGGAC 3 cut(s) 640, 2196, 2396
BsnI GGCC 1 cut(s) 2653
BsoBI CYCGRG 3 cut(s) 869, 882, 2379
Bsp119I TTCGAA 2 cut(s) 701, 2097
Bsp1286I GDGCHC 3 cut(s) 164, 949, 2529
Bsp1720I GCTNAGC 1 cut(s) 1805
Bsp19I CCATGG 1 cut(s) 2184
BspACI CCGC 5 cut(s) 496, 855, 2271, 2282, 2684
BspANI GGCC 1 cut(s) 2653
BspCNI CTCAG 6 cut(s) 1040, 1386, 1521, 2329, 2475, 2500
BspFNI CGCG 1 cut(s) 1111
BspLI GGNNCC 1 cut(s) 2343
BspPI GGATC 7 cut(s) 720, 738, 1427, 2010, 2108, 2336, 2349
BspQI GCTCTTC 2 cut(s) 157, 223
BspT104I TTCGAA 2 cut(s) 701, 2097
BsrDI GCAATG 7 cut(s) 255, 515, 628, 1914, 1923, 2289, 2664
BsrFI RCCGGY 1 cut(s) 2237
BsrI ACTGG 5 cut(s) 1182, 1253, 1286, 1897, 2359
BssAI RCCGGY 1 cut(s) 2237
BssECI CCNNGG 5 cut(s) 920, 963, 1795, 2184, 2379
BssNI GRCGYC 1 cut(s) 433
BssT1I CCWWGG 3 cut(s) 920, 1795, 2184
Bst2UI CCWGG 6 cut(s) 827, 1326, 1626, 2268, 2346, 2368
Bst6I CTCTTC 4 cut(s) 116, 157, 223, 528
BstACI GRCGYC 1 cut(s) 433
BstBAI YACGTR 2 cut(s) 159, 2491
BstBI TTCGAA 2 cut(s) 701, 2097
BstC8I GCNNGC 3 cut(s) 876, 1914, 2655
BstDEI CTNAG 9 cut(s) 1027, 1394, 1463, 1529, 1805, 2201, 2337, 2462, 2508
BstDSI CCRYGG 1 cut(s) 2184
BstENI CCTNNNNNAGG 1 cut(s) 2336
BstF5I GGATG 4 cut(s) 140, 1695, 1926, 2332
BstFNI CGCG 1 cut(s) 1111
BstHHI GCGC 1 cut(s) 1291
BstMAI GTCTC 1 cut(s) 744
BstMWI GCNNNNNNNGC 7 cut(s) 470, 586, 762, 944, 1913, 2659, 2681
BstNI CCWGG 6 cut(s) 827, 1326, 1626, 2268, 2346, 2368
BstPAI GACNNNNGTC 1 cut(s) 1110
BstSFI CTRYAG 3 cut(s) 615, 806, 2647
BstUI CGCG 1 cut(s) 1111
BstV1I GCAGC 6 cut(s) 505, 1991, 2116, 2270, 2306, 2693
BstV2I GAAGAC 5 cut(s) 1797, 1845, 1873, 2141, 2412
BstX2I RGATCY 4 cut(s) 730, 1420, 2002, 2341
BstXI CCANNNNNNTGG 1 cut(s) 2754
BstYI RGATCY 4 cut(s) 730, 1420, 2002, 2341
BsuRI GGCC 1 cut(s) 2653
BtgI CCRYGG 1 cut(s) 2184
BtsCI GGATG 4 cut(s) 140, 1695, 1926, 2332
BtsIMutI CAGTG 3 cut(s) 912, 1189, 2106
Cac8I GCNNGC 3 cut(s) 876, 1914, 2655
CaiI CAGNNNCTG 2 cut(s) 911, 1160
CfoI GCGC 1 cut(s) 1291
Cfr10I RCCGGY 1 cut(s) 2237
Cfr13I GGNCC 3 cut(s) 972, 2050, 2264
Cfr9I CCCGGG 1 cut(s) 2379
CseI GACGC 1 cut(s) 1100
CsiI ACCWGGT 1 cut(s) 1324
Csp6I GTAC 2 cut(s) 1203, 1644
CviAII CATG 5 cut(s) 187, 524, 1538, 1780, 2185
CviQI GTAC 2 cut(s) 1203, 1644
DdeI CTNAG 9 cut(s) 1027, 1394, 1463, 1529, 1805, 2201, 2337, 2462, 2508
DraIII CACNNNGTG 1 cut(s) 2494
Eam1104I CTCTTC 4 cut(s) 116, 157, 223, 528
EarI CTCTTC 4 cut(s) 116, 157, 223, 528
Eco130I CCWWGG 3 cut(s) 920, 1795, 2184
Eco47I GGWCC 3 cut(s) 972, 2050, 2264
Eco57I CTGAAG 1 cut(s) 1857
Eco72I CACGTG 1 cut(s) 2491
Eco88I CYCGRG 3 cut(s) 869, 882, 2379
EcoNI CCTNNNNNAGG 1 cut(s) 2336
EcoRI GAATTC 1 cut(s) 1144
EcoRII CCWGG 6 cut(s) 825, 1324, 1624, 2266, 2344, 2366
EcoT14I CCWWGG 3 cut(s) 920, 1795, 2184
ErhI CCWWGG 3 cut(s) 920, 1795, 2184
FaeI CATG 5 cut(s) 190, 527, 1541, 1783, 2188
FaqI GGGAC 3 cut(s) 640, 2196, 2396
FatI CATG 5 cut(s) 186, 523, 1537, 1779, 2184
FbaI TGATCA 3 cut(s) 643, 724, 2602
FblI GTMKAC 3 cut(s) 387, 565, 1621
Fnu4HI GCNGC 6 cut(s) 494, 1980, 2130, 2259, 2295, 2682
FokI GGATG 4 cut(s) 127, 1702, 1913, 2339
Fsp4HI GCNGC 6 cut(s) 494, 1980, 2130, 2259, 2295, 2682
FspBI CTAG 6 cut(s) 9, 1083, 1119, 1134, 1418, 2782
GlaI GCGC 1 cut(s) 1290
GluI GCNGC 6 cut(s) 494, 1980, 2130, 2259, 2295, 2682
GsaI CCCAGC 1 cut(s) 579
GsuI CTGGAG 1 cut(s) 809
HaeIII GGCC 1 cut(s) 2653
HapII CCGG 6 cut(s) 965, 2053, 2238, 2380, 2391, 2723
HgaI GACGC 1 cut(s) 1100
HhaI GCGC 1 cut(s) 1291
Hin1I GRCGYC 1 cut(s) 433
Hin1II CATG 5 cut(s) 190, 527, 1541, 1783, 2188
Hin6I GCGC 1 cut(s) 1289
HinP1I GCGC 1 cut(s) 1289
HincII GTYRAC 2 cut(s) 1622, 2500
HindII GTYRAC 2 cut(s) 1622, 2500
HindIII AAGCTT 2 cut(s) 1365, 2563
HpaII CCGG 6 cut(s) 965, 2053, 2238, 2380, 2391, 2723
HphI GGTGA 6 cut(s) 32, 116, 734, 785, 1050, 1161
Hpy166II GTNNAC 9 cut(s) 388, 566, 776, 1124, 1622, 1890, 1961, 2420, 2500
Hpy8I GTNNAC 9 cut(s) 388, 566, 776, 1124, 1622, 1890, 1961, 2420, 2500
Hpy99I CGWCG 1 cut(s) 1623
HpyAV CCTTC 7 cut(s) 11, 23, 164, 189, 1182, 1646, 2096
HpyCH4IV ACGT 6 cut(s) 158, 433, 568, 2416, 2490, 2611
HpyF10VI GCNNNNNNNGC 7 cut(s) 470, 586, 762, 944, 1913, 2659, 2681
HpyF3I CTNAG 9 cut(s) 1027, 1394, 1463, 1529, 1805, 2201, 2337, 2462, 2508
HpySE526I ACGT 6 cut(s) 158, 433, 568, 2416, 2490, 2611
Hsp92I GRCGYC 1 cut(s) 433
Hsp92II CATG 5 cut(s) 190, 527, 1541, 1783, 2188
HspAI GCGC 1 cut(s) 1289
Ksp22I TGATCA 3 cut(s) 643, 724, 2602
LguI GCTCTTC 2 cut(s) 157, 223
LmnI GCTCC 1 cut(s) 398
Lsp1109I GCAGC 6 cut(s) 505, 1991, 2116, 2270, 2306, 2693
LweI GCATC 9 cut(s) 268, 1180, 1617, 1743, 1991, 2116, 2184, 2245, 2317
MabI ACCWGGT 1 cut(s) 1324
MaeI CTAG 6 cut(s) 9, 1083, 1119, 1134, 1418, 2782
MaeII ACGT 6 cut(s) 158, 433, 568, 2416, 2490, 2611
MaeIII GTNAC 6 cut(s) 32, 235, 1576, 1635, 2426, 2620
MflI RGATCY 4 cut(s) 730, 1420, 2002, 2341
MhlI GDGCHC 3 cut(s) 164, 949, 2529
MlyI GAGTC 7 cut(s) 373, 816, 1019, 1100, 1863, 2519, 2554
MmeI TCCRAC 7 cut(s) 168, 460, 690, 1091, 1322, 2304, 2447
MroXI GAANNNNTTC 1 cut(s) 1900
MseI TTAA 7 cut(s) 407, 417, 1278, 1494, 2015, 2025, 2276
MslI CAYNNNNRTG 3 cut(s) 1956, 2610, 2752
MspA1I CMGCKG 5 cut(s) 127, 496, 2261, 2297, 2684
MspI CCGG 6 cut(s) 965, 2053, 2238, 2380, 2391, 2723
MvaI CCWGG 6 cut(s) 827, 1326, 1626, 2268, 2346, 2368
MvnI CGCG 1 cut(s) 1111
MwoI GCNNNNNNNGC 7 cut(s) 470, 586, 762, 944, 1913, 2659, 2681
NciI CCSGG 5 cut(s) 965, 2054, 2380, 2381, 2723
NcoI CCATGG 1 cut(s) 2184
NlaIII CATG 5 cut(s) 190, 527, 1541, 1783, 2188
NlaIV GGNNCC 1 cut(s) 2343
NmuCI GTSAC 3 cut(s) 32, 2426, 2620
NspV TTCGAA 2 cut(s) 701, 2097
OliI CACNNNNGTG 2 cut(s) 1956, 2610
PaeR7I CTCGAG 2 cut(s) 869, 882
PciSI GCTCTTC 2 cut(s) 157, 223
PcsI WCGNNNNNNNCGW 1 cut(s) 2672
PdmI GAANNNNTTC 1 cut(s) 1900
PfoI TCCNGGA 1 cut(s) 2344
PkrI GCNGC 6 cut(s) 495, 1981, 2131, 2260, 2296, 2683
PleI GAGTC 7 cut(s) 372, 816, 1019, 1100, 1863, 2518, 2553
PmaCI CACGTG 1 cut(s) 2491
PmlI CACGTG 1 cut(s) 2491
PpsI GAGTC 7 cut(s) 372, 816, 1019, 1100, 1863, 2518, 2553
Ppu21I YACGTR 2 cut(s) 159, 2491
PshAI GACNNNNGTC 1 cut(s) 1110
Psp6I CCWGG 6 cut(s) 825, 1324, 1624, 2266, 2344, 2366
PspCI CACGTG 1 cut(s) 2491
PspFI CCCAGC 1 cut(s) 575
PspGI CCWGG 6 cut(s) 825, 1324, 1624, 2266, 2344, 2366
PspN4I GGNNCC 1 cut(s) 2343
PspPI GGNCC 3 cut(s) 972, 2050, 2264
PspXI VCTCGAGB 1 cut(s) 869
PsrI GAACNNNNNNTAC 2 cut(s) 2293, 2325
PstNI CAGNNNCTG 2 cut(s) 911, 1160
PsuI RGATCY 4 cut(s) 730, 1420, 2002, 2341
PvuII CAGCTG 3 cut(s) 127, 2261, 2297
RsaI GTAC 2 cut(s) 1204, 1645
RsaNI GTAC 2 cut(s) 1203, 1644
RseI CAYNNNNRTG 3 cut(s) 1956, 2610, 2752
SalI GTCGAC 1 cut(s) 1620
SapI GCTCTTC 2 cut(s) 157, 223
SaqAI TTAA 7 cut(s) 407, 417, 1278, 1494, 2015, 2025, 2276
SatI GCNGC 6 cut(s) 494, 1980, 2130, 2259, 2295, 2682
Sau96I GGNCC 3 cut(s) 972, 2050, 2264
SchI GAGTC 7 cut(s) 373, 816, 1019, 1100, 1863, 2519, 2554
SduI GDGCHC 3 cut(s) 164, 949, 2529
SexAI ACCWGGT 1 cut(s) 1324
SfaNI GCATC 9 cut(s) 268, 1180, 1617, 1743, 1991, 2116, 2184, 2245, 2317
SfcI CTRYAG 3 cut(s) 615, 806, 2647
Sfr274I CTCGAG 2 cut(s) 869, 882
SfuI TTCGAA 2 cut(s) 701, 2097
SinI GGWCC 3 cut(s) 972, 2050, 2264
SlaI CTCGAG 2 cut(s) 869, 882
SmaI CCCGGG 1 cut(s) 2381
SmiMI CAYNNNNRTG 3 cut(s) 1956, 2610, 2752
SmlI CTYRAG 6 cut(s) 869, 882, 948, 1405, 1964, 2765
SmoI CTYRAG 6 cut(s) 869, 882, 948, 1405, 1964, 2765
SpeI ACTAGT 2 cut(s) 1082, 1133
SsiI CCGC 5 cut(s) 496, 855, 2271, 2282, 2684
SspI AATATT 4 cut(s) 316, 694, 841, 2089
SspMI CTAG 6 cut(s) 9, 1083, 1119, 1134, 1418, 2782
StyI CCWWGG 3 cut(s) 920, 1795, 2184
TaiI ACGT 6 cut(s) 161, 436, 571, 2419, 2493, 2614
TaqI TCGA 8 cut(s) 701, 870, 883, 1621, 1771, 1872, 2097, 2666
TatI WGTACW 1 cut(s) 1643
Tru1I TTAA 7 cut(s) 407, 417, 1278, 1494, 2015, 2025, 2276
Tru9I TTAA 7 cut(s) 407, 417, 1278, 1494, 2015, 2025, 2276
TscAI CASTG 3 cut(s) 912, 1189, 2113
TseFI GTSAC 3 cut(s) 32, 2426, 2620
TseI GCWGC 6 cut(s) 493, 1979, 2129, 2258, 2294, 2681
Tsp45I GTSAC 3 cut(s) 32, 2426, 2620
TspGWI ACGGA 2 cut(s) 1607, 2470
TspMI CCCGGG 1 cut(s) 2379
TspRI CASTG 3 cut(s) 912, 1189, 2113
VpaK11BI GGWCC 3 cut(s) 972, 2050, 2264
XagI CCTNNNNNAGG 1 cut(s) 2336
XapI RAATTY 4 cut(s) 790, 1144, 2173, 2374
XbaI TCTAGA 1 cut(s) 1417
XcmI CCANNNNNNNNNTGG 1 cut(s) 2488
XhoI CTCGAG 2 cut(s) 869, 882
XmaI CCCGGG 1 cut(s) 2379
XmiI GTMKAC 3 cut(s) 387, 565, 1621
XmnI GAANNNNTTC 1 cut(s) 1900
XspI CTAG 6 cut(s) 9, 1083, 1119, 1134, 1418, 2782
ZraI GACGTC 1 cut(s) 434
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.