Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0001572

Physical Location & Seq

Genomic Coordinates Forward (+)

10541880 .. 10548524

Gene Structure 6645 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1137700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2949 bp

ATGGAGTCTGAATTCGGAGGAAAGGGTCGAAATTTTCGTGGTGTGAAGGTGCCGGATTTGACGGGAGTTGGGACAAGGAGTATGGAATGGGATTTGAATGGTTGGAAATGGGATGGTGATCTTTTTACTGCTAGTCCATTGAATTCTACACCATCTGATGGTAGGAGTAGGCAGTTTTTTCCGGTCAGGCCAGAAACTCTGTCGGATGCTGGTTTGTCCAACAGTTCTTCTGGTTCGGATAATATCAGTCCGGGGAATGAGAAAGGTACAAGAGAATTGGAGAAACGGAGAAGGGATGTTTTTGTGGAAAACGGAGAGTTGAATGATGAAGCTGCATCTCTTAATCTTAAGCTCGGTGGGCAAACTTACCCCATTATGGAAGAAGAAGTACAAACTGGGAAGAAAAAAAAGATAATTGGGACTACTTCAAACCGTGCAGTTTGTCAGGTGGAGGACTGTAAGGCTGATCTTAGCAATGCCAAGGATTACCACCGGCGGCATAAGGTCTGTGATATGCATTCAAAGGCAACTAAAGCACTGGTTGGAAATGTTATGCAGCGATTCTGTCAACAGTGTAGCAGGTTTCATGCTCTTCAAGAGTTTGATGAAGGGAAGAGAAGTTGCCGTAGGCGTTTGGCTGGCCATAATAGGAGGAGACGAAAAACAAATCCTGATACTGCAGTTAATGGAGGCTATTTAAATAATGAAGGCGGAAGCAGTTATCTATTGATTAGCTTGCTGAGAATACTCTCGAATATGCACTCTAGTAGTTCTGATCAAACAAAGGACCAGGATGTCGTATCTCATTTGTTGAGGAGCTTAGCCAATGTTGCTGGTACAGCTGATGGAAGAAACATATCTAAATTGCTGCAGGGATCTCAAGGTTTATTTAACAGTGGGACATCTGTCCAGACTGCACGAAAGGTGCTAGATGTGGATGATGGTGTTAATCCTGAGGACCCATTAAGGCCTAAAGGACATTGTTCAATATTACCGGCATCAAGAGACAGTTCTGAATCCAAATCAGTTACACCGGAACCTACAAGCAGAAGGTTCCAGTTAAATGACATTGATTTAAATAGTACATATGATGATTCACAGGACTTTGTAGAGAACCTAGGGAATTCTCATGTTCCTGCAAGTCCAGGCACTGCATCTCTTGGTTTTCCTTCATGGATGCAGCCCGATTCTCACAAGTCAAGCCCACCTCAGACAAGCGGAAATTCAGACTTAACTTCTACTCAGTCACCATCAAGTTCTAGTGGAGAGGCTCAGAGTCGCACAGACCGAATTGTTTTTAAACTATTTGGAAAAGACCCAAGTGAACTTCCGTTCGCTCTGCGATCACAGATCCTCGACTGGTTATCCCAGAGTCCTACGAACATTGAAAGCTACATAAGGCCGGGCTGTATCATTTTGACAATTTACCTTCGTCTTGAAAAATCCACGTGGGAGGAGTTCTGTTGTCATCTGGGATCCAGTTTGAAAACACTTCTAGATGCTGTGGATGATCCTTTTTGGAGAACAGGATGGGTGTATACAAGGGTGCAACATTTTGTAGCATTTACATACAATGGTGAAGTTGTGTTAGACACACCCTTGCCTCTTAAAACGGATAAAAGTTGCAGGATATCCTGCATCAAACCAATTGCGATCTCCCTATCTGAGAGAGCTGAATTTGTAGTAAAAGGCCTTAACCTTTCTCGTTCCACCACAAGGTTACTCTGTGCTCTAGAAGGGAAGTATCTGGTGCAAGAAACTTGTTATGACTTGATGGATGATGTGGATAGCTCTGTTGAGGATGATGAACAGCAATGCCTCAGATTCTCCTGCTCTATACCAAATATTACTGGGCGAGGATTCATTGAGGTTGAAGATCATGGTCTCAGTAGTAGCTTCTTTCCATTTATAGTTGCAGAGCAGGAAGTATGCTCCGAGATTTGTATGCTGGAAGATGTGATTGAGGCGGCGGAGACTGATGATGACATCCAGTCTGGACCTGAAAAAGTGGAAGCCAAGAACCAAGCCTTGGACTTTATACATGAATTGGGTTGGCTCCTCCATAGAAGTCGCGTTAAGTTTAGACTGGGTCAGTTGGATCCCAGTCTCGATCTATTTCCCTTTGGACGGTTCAGGTTGCTCATGGAGTTCTCCATTGACCATGATTGGTGTGCTGTAGTGAAGAAACTCTTGGGCATTCTGTTTGATGGTACTGTCGATGCTGGAAAGCATCCTTCTGTTGAGTCTGCATTACTGGATATGGGTCTCCTCCACAGAGCTGTTCGAGGAAATGGCAGACGTATGGTGGAATTTTTATTAAGATTTGTCCCAGGTTTGACAGGATCTGAGCAGAACAAACAAGTTGACAAGGACGGCAACAGTTTCTTGTTTAAACCTGATGTTGTTGGGCCCATGGGGTTGACTCCTCTTCATATTGCCGCCAGTACTGATGGCTGTGAGCAAGTATTGGATGCCTTAACGGATGATCCTGGAAAGGTGGGAATTAAAGCATGGAAAAACGCTCGAGACAGCACAGGATTGACACCATACGATTATGCATGCCTTCGAAGCCACTACTCCTATGTCCAAATTGTCCAGCGGAAAATCAGCAAGACACTTGAAAGCGGGCATGTGGTGCTTGACATCCCTGGCCTCACGTTTGACAGAAACGGAAAGCAGAAGCAGTCCGATGCAGATAAATCATCAAGAGTAGCCAGCTTGGAAACTGAAAAGAATGAAATAAAAGCAATCTTGCGACACTGCAGGTTATGTGAACAGAAACCAGCTTACAGCACCACGCGGTCACTTGTGTACAGGCCGGCAATGCTGTCAATGGTGATTGTTGCTGCTGTCTGCGTTTGTGTGGCCTTGCTCTTTAAAAGCACGCCGGAAGTTCTTTTCGTGTTCGAGCCATTCCGGTGGGAACACCTGAAGTTCGGTTCAAGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SBP

Protein Analysis

983

Amino Acids

109.12

Weight (kDa)

6.14

Isoelectric Point (pI)

52.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SBP	PF03110	148 - 221	3.2e-30	SBP domain
Ig_SPL7	PF26102	538 - 649	9.6e-44	SPL7-like, immunoglobulin-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001572)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47070 AT2G47070 AT3G60030
fragaria_vesca	FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420
malus_domestica	MD13G1141300.v1.1 MD13G1141400.v1.1 MD16G1137600.v1.1 MD16G1137700.v1.1
prunus_persica	Prupe.1G106500_v2.0.a1 Prupe.1G106500_v2.0.a1 Prupe.1G106600_v2.0.a1
pyrus_communis	pycom13g12280 pycom13g12290 pycom16g12140 pycom16g12150 pycom16g12160
rosa_chinensis	RchiOBHm_Chr4g0427341 RchiOBHm_Chr4g0427351
rosa_laevigata	RLG00000007250 RLG00000007251
rosa_multiflora	Rmu_sc0003813.1_g000017 Rmu_sc0003813.1_g000018
rosa_roxburghii	Rroxscaffold_5G00369020 Rroxscaffold_5G00369030
rosa_rugosa	Rorug04G0216800
rosa_samantha	Rh4AG273100 Rh4AG273300 Rh4BG278800 Rh4BG278900 Rh4CG294100 Rh4CG294200 Rh4DG276200 Rh4DG276300
rosa_wichuraiana	Rw4G023700 Rw4G023710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	794
Acc36I	ACCTGC	2 cut(s)	570, 2754
AccB1I	GGYRCC	1 cut(s)	49
AccB7I	CCANNNNNTGG	2 cut(s)	158, 2029
AccI	GTMKAC	1 cut(s)	1538
AccII	CGCG	2 cut(s)	2073, 2800
AciI	CCGC	9 cut(s)	496, 711, 1218, 1967, 1970, 2439, 2599, 2625, 2800
AclWI	GGATC	9 cut(s)	883, 1345, 1470, 1483, 1505, 2093, 2106, 2350, 2480
AcoI	YGGCCR	1 cut(s)	640
AcsI	RAATTY	7 cut(s)	11, 31, 142, 1123, 1222, 1676, 2309
AcvI	CACGTG	1 cut(s)	1449
AfaI	GTAC	7 cut(s)	268, 390, 838, 1084, 2212, 2446, 2813
AfiI	CCNNNNNNNGG	5 cut(s)	158, 376, 1716, 2029, 2127
AflII	CTTAAG	1 cut(s)	347
AhdI	GACNNNNNGTC	1 cut(s)	1990
AjnI	CCWGG	5 cut(s)	789, 1144, 2329, 2488, 2647
AjuI	GAANNNNNNNTTGG	4 cut(s)	2012, 2044, 2174, 2206
Alw21I	GWGCWC	1 cut(s)	1732
Alw26I	GTCTC	7 cut(s)	649, 999, 1889, 1967, 2111, 2270, 2520
AlwI	GGATC	9 cut(s)	883, 1345, 1470, 1483, 1505, 2093, 2106, 2350, 2480
AlwNI	CAGNNNCTG	2 cut(s)	1151, 2345
Ama87I	CYCGRG	1 cut(s)	2523
AoxI	GGCC	9 cut(s)	188, 640, 968, 1400, 1690, 2408, 2650, 2816, 2865
ApaI	GGGCCC	1 cut(s)	2412
ApeKI	GCWGC	5 cut(s)	332, 556, 868, 1180, 2846
ApoI	RAATTY	7 cut(s)	11, 31, 142, 1123, 1222, 1676, 2309
AspA2I	CCTAGG	1 cut(s)	1117
AspS9I	GGNCC	5 cut(s)	787, 958, 1997, 2408, 2409
AsuC2I	CCSGG	2 cut(s)	252, 1404
AsuHPI	GGTGA	4 cut(s)	128, 1239, 1589, 2848
AsuII	TTCGAA	1 cut(s)	2566
AvaI	CYCGRG	1 cut(s)	2523
AvaII	GGWCC	3 cut(s)	787, 958, 1997
AvrII	CCTAGG	1 cut(s)	1117
AxyI	CCTNAGG	1 cut(s)	954
BaeGI	GKGCMC	1 cut(s)	2412
BaeI	ACNNNNGTAYC	2 cut(s)	666, 699
BalI	TGGCCA	1 cut(s)	642
BamHI	GGATCC	2 cut(s)	1475, 2098
BanI	GGYRCC	1 cut(s)	49
BanII	GRGCYC	1 cut(s)	2412
BarI	GAAGNNNNNNTAC	2 cut(s)	372, 404
BbrPI	CACGTG	1 cut(s)	1449
Bbv12I	GWGCWC	1 cut(s)	1732
BbvI	GCAGC	5 cut(s)	319, 568, 855, 1192, 2833
BceAI	ACGGC	2 cut(s)	609, 2389
BciT130I	CCWGG	5 cut(s)	791, 1146, 2331, 2490, 2649
BclI	TGATCA	1 cut(s)	775
BcnI	CCSGG	2 cut(s)	252, 1404
BcoDI	GTCTC	7 cut(s)	649, 999, 1889, 1967, 2111, 2270, 2520
BfaI	CTAG	7 cut(s)	132, 765, 929, 1118, 1260, 1496, 1733
BfmI	CTRYAG	4 cut(s)	678, 869, 2175, 2761
BfrI	CTTAAG	1 cut(s)	347
BfuAI	ACCTGC	2 cut(s)	570, 2754
BisI	GCNGC	8 cut(s)	333, 497, 557, 869, 1181, 1968, 2439, 2847
BlnI	CCTAGG	1 cut(s)	1117
BlpI	GCTNAGC	1 cut(s)	820
BlsI	GCNGC	8 cut(s)	334, 498, 558, 870, 1182, 1969, 2440, 2848
BmcAI	AGTACT	1 cut(s)	2446
Bme1390I	CCNGG	7 cut(s)	252, 791, 1146, 1404, 2331, 2490, 2649
Bme18I	GGWCC	3 cut(s)	787, 958, 1997
BmeRI	GACNNNNNGTC	1 cut(s)	1990
BmeT110I	CYCGRG	1 cut(s)	2523
BmgT120I	GGNCC	5 cut(s)	787, 958, 1997, 2408, 2409
BmiI	GGNNCC	8 cut(s)	51, 960, 1038, 1055, 1477, 2057, 2100, 2410
BmrFI	CCNGG	7 cut(s)	252, 791, 1146, 1404, 2331, 2490, 2649
BmrI	ACTGGG	4 cut(s)	405, 1860, 2096, 2097
BmuI	ACTGGG	4 cut(s)	405, 1860, 2096, 2097
BoxI	GACNNNNGTC	1 cut(s)	905
Bpu1102I	GCTNAGC	1 cut(s)	820
Bpu14I	TTCGAA	1 cut(s)	2566
BpuEI	CTTGAG	1 cut(s)	864
BpuMI	CCSGG	2 cut(s)	252, 1404
BsaAI	YACGTR	1 cut(s)	1449
BsaBI	GATNNNNATC	1 cut(s)	117
BsaI	GGTCTC	2 cut(s)	1889, 2270
BsaJI	CCNNGG	7 cut(s)	251, 480, 1117, 2028, 2329, 2412, 2647
BsaWI	WCCGGW	3 cut(s)	181, 1033, 2916
Bsc4I	CCNNNNNNNGG	5 cut(s)	158, 376, 1716, 2029, 2127
Bse118I	RCCGGY	3 cut(s)	492, 994, 2818
Bse21I	CCTNAGG	1 cut(s)	954
Bse3DI	GCAATG	3 cut(s)	481, 1820, 2829
Bse8I	GATNNNNATC	1 cut(s)	117
BseBI	CCWGG	5 cut(s)	791, 1146, 2331, 2490, 2649
BseDI	CCNNGG	7 cut(s)	251, 480, 1117, 2028, 2329, 2412, 2647
BseJI	GATNNNNATC	1 cut(s)	117
BseLI	CCNNNNNNNGG	5 cut(s)	158, 376, 1716, 2029, 2127
BseMI	GCAATG	3 cut(s)	481, 1820, 2829
BseMII	CTCAG	9 cut(s)	731, 945, 1223, 1256, 1286, 1656, 1834, 1900, 2337
BseRI	GAGGAG	6 cut(s)	667, 829, 1469, 2048, 2258, 2415
BseSI	GKGCMC	1 cut(s)	2412
BseXI	GCAGC	5 cut(s)	319, 568, 855, 1192, 2833
BsgI	GTGCAG	2 cut(s)	456, 900
Bsh1236I	CGCG	2 cut(s)	2073, 2800
BshFI	GGCC	9 cut(s)	190, 642, 970, 1402, 1692, 2410, 2652, 2818, 2867
BshNI	GGYRCC	1 cut(s)	49
BsiHKAI	GWGCWC	1 cut(s)	1732
BsiHKCI	CYCGRG	1 cut(s)	2523
BslFI	GGGAC	4 cut(s)	85, 433, 913, 2312
BslI	CCNNNNNNNGG	5 cut(s)	158, 376, 1716, 2029, 2127
BsmAI	GTCTC	7 cut(s)	649, 999, 1889, 1967, 2111, 2270, 2520
BsmBI	CGTCTC	1 cut(s)	649
BsmFI	GGGAC	4 cut(s)	85, 433, 913, 2312
BsmI	GAATGC	2 cut(s)	517, 2196
BsnI	GGCC	9 cut(s)	190, 642, 970, 1402, 1692, 2410, 2652, 2818, 2867
Bso31I	GGTCTC	2 cut(s)	1889, 2270
BsoBI	CYCGRG	1 cut(s)	2523
Bsp119I	TTCGAA	1 cut(s)	2566
Bsp120I	GGGCCC	1 cut(s)	2408
Bsp1286I	GDGCHC	2 cut(s)	1732, 2412
Bsp1407I	TGTACA	1 cut(s)	2811
Bsp1720I	GCTNAGC	1 cut(s)	820
Bsp19I	CCATGG	1 cut(s)	2412
BspACI	CCGC	9 cut(s)	496, 711, 1218, 1967, 1970, 2439, 2599, 2625, 2800
BspANI	GGCC	9 cut(s)	190, 642, 970, 1402, 1692, 2410, 2652, 2818, 2867
BspCNI	CTCAG	9 cut(s)	732, 946, 1222, 1255, 1285, 1657, 1833, 1899, 2338
BspFNI	CGCG	2 cut(s)	2073, 2800
BspLI	GGNNCC	8 cut(s)	51, 960, 1038, 1055, 1477, 2057, 2100, 2410
BspMAI	CTGCAG	3 cut(s)	682, 873, 2765
BspMI	ACCTGC	2 cut(s)	570, 2754
BspPI	GGATC	9 cut(s)	883, 1345, 1470, 1483, 1505, 2093, 2106, 2350, 2480
BspQI	GCTCTTC	1 cut(s)	597
BspT104I	TTCGAA	1 cut(s)	2566
BspT107I	GGYRCC	1 cut(s)	49
BspTI	CTTAAG	1 cut(s)	347
BspTNI	GGTCTC	2 cut(s)	1889, 2270
BsrDI	GCAATG	3 cut(s)	481, 1820, 2829
BsrFI	RCCGGY	3 cut(s)	492, 994, 2818
BsrGI	TGTACA	1 cut(s)	2811
BssAI	RCCGGY	3 cut(s)	492, 994, 2818
BssECI	CCNNGG	7 cut(s)	251, 480, 1117, 2028, 2329, 2412, 2647
BssNAI	GTATAC	1 cut(s)	1539
BssT1I	CCWWGG	4 cut(s)	480, 1117, 2028, 2412
Bst1107I	GTATAC	1 cut(s)	1539
Bst2UI	CCWGG	5 cut(s)	791, 1146, 2331, 2490, 2649
Bst4CI	ACNGT	9 cut(s)	224, 434, 458, 573, 896, 1010, 2130, 2215, 2381
Bst6I	CTCTTC	3 cut(s)	597, 608, 2433
BstAFI	CTTAAG	1 cut(s)	347
BstAPI	GCANNNNNTGC	1 cut(s)	2635
BstAUI	TGTACA	1 cut(s)	2811
BstBAI	YACGTR	1 cut(s)	1449
BstBI	TTCGAA	1 cut(s)	2566
BstC8I	GCNNGC	7 cut(s)	640, 737, 2560, 2627, 2716, 2820, 2885
BstDSI	CCRYGG	1 cut(s)	2412
BstFNI	CGCG	2 cut(s)	2073, 2800
BstMAI	GTCTC	7 cut(s)	649, 999, 1889, 1967, 2111, 2270, 2520
BstMWI	GCNNNNNNNGC	7 cut(s)	358, 533, 830, 839, 2568, 2635, 2824
BstNI	CCWGG	5 cut(s)	791, 1146, 2331, 2490, 2649
BstNSI	RCATGY	2 cut(s)	2562, 2633
BstPAI	GACNNNNGTC	1 cut(s)	905
BstSCI	CCNGG	7 cut(s)	250, 789, 1144, 1402, 2329, 2488, 2647
BstSFI	CTRYAG	4 cut(s)	678, 869, 2175, 2761
BstSLI	GKGCMC	1 cut(s)	2412
BstUI	CGCG	2 cut(s)	2073, 2800
BstV1I	GCAGC	5 cut(s)	319, 568, 855, 1192, 2833
BstX2I	RGATCY	5 cut(s)	875, 1350, 1475, 2098, 2342
BstXI	CCANNNNNNTGG	1 cut(s)	2919
BstYI	RGATCY	5 cut(s)	875, 1350, 1475, 2098, 2342
BstZ17I	GTATAC	1 cut(s)	1539
Bsu36I	CCTNAGG	1 cut(s)	954
BsuRI	GGCC	9 cut(s)	190, 642, 970, 1402, 1692, 2410, 2652, 2818, 2867
BtgI	CCRYGG	1 cut(s)	2412
BtsI	GCAGTG	2 cut(s)	1149, 2758
BtsIMutI	CAGTG	5 cut(s)	536, 578, 901, 1149, 2758
BveI	ACCTGC	2 cut(s)	570, 2754
Cac8I	GCNNGC	7 cut(s)	640, 737, 2560, 2627, 2716, 2820, 2885
CaiI	CAGNNNCTG	2 cut(s)	1151, 2345
Cfr10I	RCCGGY	3 cut(s)	492, 994, 2818
Cfr13I	GGNCC	5 cut(s)	787, 958, 1997, 2408, 2409
Csp6I	GTAC	7 cut(s)	267, 389, 837, 1083, 2211, 2445, 2812
CviQI	GTAC	7 cut(s)	267, 389, 837, 1083, 2211, 2445, 2812
DraI	TTTAAA	5 cut(s)	699, 1077, 1300, 2392, 2878
DrdI	GACNNNNNNGTC	1 cut(s)	794
DriI	GACNNNNNGTC	1 cut(s)	1990
DseDI	GACNNNNNNGTC	1 cut(s)	794
EaeI	YGGCCR	1 cut(s)	640
Eam1104I	CTCTTC	3 cut(s)	597, 608, 2433
Eam1105I	GACNNNNNGTC	1 cut(s)	1990
EarI	CTCTTC	3 cut(s)	597, 608, 2433
EciI	GGCGGA	2 cut(s)	726, 1985
Eco130I	CCWWGG	4 cut(s)	480, 1117, 2028, 2412
Eco147I	AGGCCT	2 cut(s)	970, 1692
Eco24I	GRGCYC	1 cut(s)	2412
Eco31I	GGTCTC	2 cut(s)	1889, 2270
Eco32I	GATATC	1 cut(s)	1632
Eco47I	GGWCC	3 cut(s)	787, 958, 1997
Eco72I	CACGTG	1 cut(s)	1449
Eco81I	CCTNAGG	1 cut(s)	954
Eco88I	CYCGRG	1 cut(s)	2523
EcoO109I	RGGNCCY	1 cut(s)	958
EcoRI	GAATTC	3 cut(s)	11, 142, 1123
EcoRII	CCWGG	5 cut(s)	789, 1144, 2329, 2488, 2647
EcoRV	GATATC	1 cut(s)	1632
EcoT14I	CCWWGG	4 cut(s)	480, 1117, 2028, 2412
EcoT22I	ATGCAT	2 cut(s)	519, 2560
EcoT38I	GRGCYC	1 cut(s)	2412
ErhI	CCWWGG	4 cut(s)	480, 1117, 2028, 2412
Esp3I	CGTCTC	1 cut(s)	649
FalI	AAGNNNNNCTT	2 cut(s)	2174, 2206
FaqI	GGGAC	4 cut(s)	85, 433, 913, 2312
FauI	CCCGC	1 cut(s)	2618
FauNDI	CATATG	1 cut(s)	1087
FbaI	TGATCA	1 cut(s)	775
FblI	GTMKAC	1 cut(s)	1538
Fnu4HI	GCNGC	8 cut(s)	333, 497, 557, 869, 1181, 1968, 2439, 2847
FriOI	GRGCYC	1 cut(s)	2412
Fsp4HI	GCNGC	8 cut(s)	333, 497, 557, 869, 1181, 1968, 2439, 2847
FspBI	CTAG	7 cut(s)	132, 765, 929, 1118, 1260, 1496, 1733
GluI	GCNGC	8 cut(s)	333, 497, 557, 869, 1181, 1968, 2439, 2847
HaeIII	GGCC	9 cut(s)	190, 642, 970, 1402, 1692, 2410, 2652, 2818, 2867
HincII	GTYRAC	3 cut(s)	569, 2365, 2421
HindII	GTYRAC	3 cut(s)	569, 2365, 2421
HphI	GGTGA	4 cut(s)	128, 1239, 1589, 2848
Hpy166II	GTNNAC	7 cut(s)	569, 1325, 1539, 2365, 2421, 2774, 2812
Hpy8I	GTNNAC	7 cut(s)	569, 1325, 1539, 2365, 2421, 2774, 2812
HpyCH4III	ACNGT	9 cut(s)	224, 434, 458, 573, 896, 1010, 2130, 2215, 2381
HpyCH4IV	ACGT	3 cut(s)	1448, 2299, 2657
HpyF10VI	GCNNNNNNNGC	7 cut(s)	358, 533, 830, 839, 2568, 2635, 2824
HpySE526I	ACGT	3 cut(s)	1448, 2299, 2657
KroI	GCCGGC	1 cut(s)	2818
KroNI	GCCGGC	1 cut(s)	2820
Ksp22I	TGATCA	1 cut(s)	775
LguI	GCTCTTC	1 cut(s)	597
LmnI	GCTCC	3 cut(s)	816, 1937, 2061
Lsp1109I	GCAGC	5 cut(s)	319, 568, 855, 1192, 2833
MaeI	CTAG	7 cut(s)	132, 765, 929, 1118, 1260, 1496, 1733
MaeII	ACGT	3 cut(s)	1448, 2299, 2657
MaeIII	GTNAC	4 cut(s)	1027, 1245, 1719, 2802
MfeI	CAATTG	1 cut(s)	1647
MflI	RGATCY	5 cut(s)	875, 1350, 1475, 2098, 2342
MhlI	GDGCHC	2 cut(s)	1732, 2412
MlsI	TGGCCA	1 cut(s)	642
MluNI	TGGCCA	1 cut(s)	642
MlyI	GAGTC	5 cut(s)	14, 1285, 1381, 2252, 2416
MmeI	TCCRAC	5 cut(s)	83, 183, 243, 523, 2076
Mox20I	TGGCCA	1 cut(s)	642
Mph1103I	ATGCAT	2 cut(s)	519, 2560
MroNI	GCCGGC	1 cut(s)	2818
MscI	TGGCCA	1 cut(s)	642
MslI	CAYNNNNRTG	1 cut(s)	2917
Msp20I	TGGCCA	1 cut(s)	642
MspA1I	CMGCKG	2 cut(s)	842, 2599
MspCI	CTTAAG	1 cut(s)	347
MspR9I	CCNGG	7 cut(s)	252, 791, 1146, 1404, 2331, 2490, 2649
MssI	GTTTAAAC	1 cut(s)	2392
MunI	CAATTG	1 cut(s)	1647
Mva1269I	GAATGC	2 cut(s)	517, 2196
MvaI	CCWGG	5 cut(s)	791, 1146, 2331, 2490, 2649
MvnI	CGCG	2 cut(s)	2073, 2800
MwoI	GCNNNNNNNGC	7 cut(s)	358, 533, 830, 839, 2568, 2635, 2824
NaeI	GCCGGC	1 cut(s)	2820
NciI	CCSGG	2 cut(s)	252, 1404
NcoI	CCATGG	1 cut(s)	2412
NdeI	CATATG	1 cut(s)	1087
NgoMIV	GCCGGC	1 cut(s)	2818
NlaIV	GGNNCC	8 cut(s)	51, 960, 1038, 1055, 1477, 2057, 2100, 2410
NmuCI	GTSAC	2 cut(s)	1245, 2802
NsiI	ATGCAT	2 cut(s)	519, 2560
NspI	RCATGY	2 cut(s)	2562, 2633
NspV	TTCGAA	1 cut(s)	2566
PaeI	GCATGC	1 cut(s)	2562
PaeR7I	CTCGAG	1 cut(s)	2523
PceI	AGGCCT	2 cut(s)	970, 1692
PciSI	GCTCTTC	1 cut(s)	597
PcsI	WCGNNNNNNNCGW	2 cut(s)	34, 1285
PctI	GAATGC	2 cut(s)	517, 2196
PdiI	GCCGGC	1 cut(s)	2820
PfeI	GAWTC	6 cut(s)	561, 1016, 1094, 1187, 1824, 1860
PflFI	GACNNNGTC	1 cut(s)	2088
PflMI	CCANNNNNTGG	2 cut(s)	158, 2029
PfoI	TCCNGGA	1 cut(s)	2488
PkrI	GCNGC	8 cut(s)	334, 498, 558, 870, 1182, 1969, 2440, 2848
PleI	GAGTC	5 cut(s)	13, 1284, 1380, 2251, 2416
PmaCI	CACGTG	1 cut(s)	1449
PmeI	GTTTAAAC	1 cut(s)	2392
PmlI	CACGTG	1 cut(s)	1449
PpsI	GAGTC	5 cut(s)	13, 1284, 1380, 2251, 2416
Ppu21I	YACGTR	1 cut(s)	1449
PpuMI	RGGWCCY	1 cut(s)	958
PshAI	GACNNNNGTC	1 cut(s)	905
Psp5II	RGGWCCY	1 cut(s)	958
Psp6I	CCWGG	5 cut(s)	789, 1144, 2329, 2488, 2647
PspCI	CACGTG	1 cut(s)	1449
PspGI	CCWGG	5 cut(s)	789, 1144, 2329, 2488, 2647
PspN4I	GGNNCC	8 cut(s)	51, 960, 1038, 1055, 1477, 2057, 2100, 2410
PspOMI	GGGCCC	1 cut(s)	2408
PspPI	GGNCC	5 cut(s)	787, 958, 1997, 2408, 2409
PspPPI	RGGWCCY	1 cut(s)	958
PstI	CTGCAG	3 cut(s)	682, 873, 2765
PstNI	CAGNNNCTG	2 cut(s)	1151, 2345
PsuI	RGATCY	5 cut(s)	875, 1350, 1475, 2098, 2342
PsyI	GACNNNGTC	1 cut(s)	2088
PvuII	CAGCTG	1 cut(s)	842
RsaI	GTAC	7 cut(s)	268, 390, 838, 1084, 2212, 2446, 2813
RsaNI	GTAC	7 cut(s)	267, 389, 837, 1083, 2211, 2445, 2812
RseI	CAYNNNNRTG	1 cut(s)	2917
SapI	GCTCTTC	1 cut(s)	597
SatI	GCNGC	8 cut(s)	333, 497, 557, 869, 1181, 1968, 2439, 2847
Sau96I	GGNCC	5 cut(s)	787, 958, 1997, 2408, 2409
ScaI	AGTACT	1 cut(s)	2446
SchI	GAGTC	5 cut(s)	14, 1285, 1381, 2252, 2416
ScrFI	CCNGG	7 cut(s)	252, 791, 1146, 1404, 2331, 2490, 2649
SduI	GDGCHC	2 cut(s)	1732, 2412
SfcI	CTRYAG	4 cut(s)	678, 869, 2175, 2761
Sfr274I	CTCGAG	1 cut(s)	2523
SfuI	TTCGAA	1 cut(s)	2566
SgrAI	CRCCGGYG	1 cut(s)	492
SinI	GGWCC	3 cut(s)	787, 958, 1997
SlaI	CTCGAG	1 cut(s)	2523
SmiI	ATTTAAAT	2 cut(s)	699, 1077
SmiMI	CAYNNNNRTG	1 cut(s)	2917
SmlI	CTYRAG	3 cut(s)	347, 879, 2523
SmoI	CTYRAG	3 cut(s)	347, 879, 2523
SphI	GCATGC	1 cut(s)	2562
SseBI	AGGCCT	2 cut(s)	970, 1692
SsiI	CCGC	9 cut(s)	496, 711, 1218, 1967, 1970, 2439, 2599, 2625, 2800
SspI	AATATT	2 cut(s)	990, 1846
SspMI	CTAG	7 cut(s)	132, 765, 929, 1118, 1260, 1496, 1733
StuI	AGGCCT	2 cut(s)	970, 1692
StyD4I	CCNGG	7 cut(s)	250, 789, 1144, 1402, 2329, 2488, 2647
StyI	CCWWGG	4 cut(s)	480, 1117, 2028, 2412
SwaI	ATTTAAAT	2 cut(s)	699, 1077
TaaI	ACNGT	9 cut(s)	224, 434, 458, 573, 896, 1010, 2130, 2215, 2381
TaiI	ACGT	3 cut(s)	1451, 2302, 2660
TaqI	TCGA	9 cut(s)	28, 752, 1356, 2109, 2217, 2284, 2524, 2566, 2907
TaqII	GACCGA	1 cut(s)	1302
TatI	WGTACW	4 cut(s)	388, 1082, 2444, 2811
TauI	GCSGC	3 cut(s)	499, 1970, 2441
TfiI	GAWTC	6 cut(s)	561, 1016, 1094, 1187, 1824, 1860
TscAI	CASTG	5 cut(s)	543, 578, 901, 1156, 2765
TseFI	GTSAC	2 cut(s)	1245, 2802
TseI	GCWGC	5 cut(s)	332, 556, 868, 1180, 2846
Tsp45I	GTSAC	2 cut(s)	1245, 2802
TspGWI	ACGGA	6 cut(s)	301, 327, 1320, 1628, 2495, 2685
TspRI	CASTG	5 cut(s)	543, 578, 901, 1156, 2765
Tth111I	GACNNNGTC	1 cut(s)	2088
Van91I	CCANNNNNTGG	2 cut(s)	158, 2029
Vha464I	CTTAAG	1 cut(s)	347
VpaK11BI	GGWCC	3 cut(s)	787, 958, 1997
XapI	RAATTY	7 cut(s)	11, 31, 142, 1123, 1222, 1676, 2309
XbaI	TCTAGA	2 cut(s)	1495, 1732
XceI	RCATGY	2 cut(s)	2562, 2633
XhoI	CTCGAG	1 cut(s)	2523
XmaJI	CCTAGG	1 cut(s)	1117
XmiI	GTMKAC	1 cut(s)	1538
XspI	CTAG	7 cut(s)	132, 765, 929, 1118, 1260, 1496, 1733
ZrmI	AGTACT	1 cut(s)	2446
Zsp2I	ATGCAT	2 cut(s)	519, 2560

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.