Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003813.1

Orthogroup ID

OG0001572

Physical Location & Seq

Genomic Coordinates Reverse (-)

80792 .. 87171

Gene Structure 6380 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003813.1_g000017.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2586 bp

atgtttatcctcgcgggcaggtttcatgttcttaaagagtttgatgaagggaagagaagttgtcgtaggcgtttggctggccataataagaggagaagaaaaacacttcctgacactgctgttaatgcaggctccttgaacgatgaaattggaagcagttatctattaattagtttgctgagaatactctccaatatgcactctaatagttctgatcaaacgaaggatcaggatctgctatctcacctgttgaagagcatagccaatcttgctggtacagttgatgggagaaacatatctgcattacttcaggcatctcaaggtttacctaacactgggtcttccatcaagactgcacaacaggttccagacatatctgcattacttcaggcatctcaaggtttacctaacactgggtcttccatcaagactgcacaacaggttccagatacagtttccaacatctttgaacccagtaggccttctgtttctgcctcaagtatggatgattgtgttattattgaggaacctttaaggcccataggacagtgcccgatattacctgcatcagatatgcaaaagagaagatcttcagttgatggcgatcttggaagtcaaattacttcaggtctacaggccaacaagccacttccttcaagagaaagtgctccaaccaattcagttacaccgatccagttacttgagattgatttaaatagtccatatgatgattcacaggactatttagagaacctagggacttgtcatgtcactataaatccagggatacaacaagattctcacaagtcaagcccacctcagaccagtgggaattcagactcaacttttactcagtcaccatcaagttctagtggagaatctcagaatcgcacagaccgcattgtttttaaactctttggaaaagacccgaatgaacttccatttgttctgcgatcacagattatcgactggatatcccatagtcctacagagattgaaagctatttaaggccaagatcgatgcatcattttgacaatttacctccgtctagaaaaatccacgtgggaggaggtgtgcttctattctcgatctgctatcatctgggatccagttttcaaagacttttagatgccaccaatgatcctttctggagaacaggatgggtgtatactaggatgcaacattttgttgcgtttgtgtacaatggtcaagttgtcttagacacaaccttacctcttaaaagtcaaaaaagttgcaggatatcaagcattaaaccaattgcagtctctttatctgagagagcccagtttgtcgtaaaaggctttaaccttcctcattccaccacaaggttactatgtgctctagaagggaagtatctggcgcaagaagcttgtgatgacgtgatggatggtgctgatacaactgttgagcatgatgagctacagtgcatcagattctcctgctctataccaaatgttactgggcgaggattcattgaggttgaagatcttggtctcagtagcagcttctttccatttatagttgcagagcaggaagtgtgttcagagatttgtatgttggaggatgcgatagaggcagctgagactgttgatgacatccaggcagatcctgaaatattagaagccaagaaccaggctatggactttatacatgaattgggttggcttcttcatagaagtcatgttaagtttagacttggtcacctggatcccaacctagatctatttccttttagacggttcaaattacttatggagttttccatggatcatgactggtgtgctgtagtgaagaaactcttgaagcttctgtttgacagtactgttgataccggagaacatccttccgttcagcttgcattattggatatggccctcctccacagagctgttcgaagaaattgcagacctatggtagaactgttgttaagatttgttccagataaaggtttagaatctgaacagaagaaatacgttgaaggggaagacaacagtttcttatttaaacctgatggtgttggtcccctggggttgactcctcttcatgttgcagctagtattgatggttgtgagcacgtattggatgctttaactgatgatcctggaaaggtgggaattgaagcttggaaaaatgctcgagacagtacaggaatgacaccatatgattatgcatccatgcaaggccgttactcctatatcaatcttgttcagaggaaaatcagcaagaaacttgagagtgggcatgtggttcttgatatccccggcactgtgttagagagcaatagcaagcagaagcaatcagatgggcatagatcatcaaaagtagctagccttgacactgaaaagtttgaaataaatgcattaatacgaagagattgcaagttatgtagccagaaactagcttatggcagcacaaggtcactggtgtacaggccggcaatgttgtcaatggtggccattgctgccgtctgtgtctgtgtggccttgctctttaagagcacccctgaagttgttttcatcttccaccccttccggtgggagcatttgaagtttggctcaagctaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SBP

Protein Analysis

861

Amino Acids

95.48

Weight (kDa)

6.1

Isoelectric Point (pI)

50.4

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001572)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47070 AT2G47070 AT3G60030
fragaria_vesca	FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420
malus_domestica	MD13G1141300.v1.1 MD13G1141400.v1.1 MD16G1137600.v1.1 MD16G1137700.v1.1
prunus_persica	Prupe.1G106500_v2.0.a1 Prupe.1G106500_v2.0.a1 Prupe.1G106600_v2.0.a1
pyrus_communis	pycom13g12280 pycom13g12290 pycom16g12140 pycom16g12150 pycom16g12160
rosa_chinensis	RchiOBHm_Chr4g0427341 RchiOBHm_Chr4g0427351
rosa_laevigata	RLG00000007250 RLG00000007251
rosa_multiflora	Rmu_sc0003813.1_g000017 Rmu_sc0003813.1_g000018
rosa_roxburghii	Rroxscaffold_5G00369020 Rroxscaffold_5G00369030
rosa_rugosa	Rorug04G0216800
rosa_samantha	Rh4AG273100 Rh4AG273300 Rh4BG278800 Rh4BG278900 Rh4CG294100 Rh4CG294200 Rh4DG276200 Rh4DG276300
rosa_wichuraiana	Rw4G023700 Rw4G023710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	9, 571
AccB7I	CCANNNNNTGG	1 cut(s)	1660
AccI	GTMKAC	2 cut(s)	631, 1169
AccII	CGCG	1 cut(s)	14
AciI	CCGC	2 cut(s)	14, 898
AcoI	YGGCCR	2 cut(s)	79, 2475
AcsI	RAATTY	1 cut(s)	832
AcuI	CTGAAG	5 cut(s)	293, 371, 576, 609, 2547
AcvI	CACGTG	1 cut(s)	1063
AfaI	GTAC	5 cut(s)	277, 1202, 1843, 2167, 2450
AfiI	CCNNNNNNNGG	6 cut(s)	335, 413, 1347, 1660, 1967, 2556
AjiI	CACGTC	1 cut(s)	1402
AjnI	CCWGG	6 cut(s)	781, 1620, 1653, 1725, 2046, 2122
AjuI	GAANNNNNNNTTGG	4 cut(s)	1130, 1162, 2128, 2160
Alw21I	GWGCWC	4 cut(s)	670, 1363, 2097, 2522
Alw26I	GTCTC	4 cut(s)	1291, 1520, 1598, 2154
AlwNI	CAGNNNCTG	2 cut(s)	235, 1631
Ama87I	CYCGRG	1 cut(s)	2157
ApeKI	GCWGC	5 cut(s)	1524, 1598, 2072, 2430, 2483
ApoI	RAATTY	1 cut(s)	832
AseI	ATTAAT	2 cut(s)	167, 2384
Asp700I	GAANNNNTTC	1 cut(s)	589
AspA2I	CCTAGG	1 cut(s)	754
AspLEI	GCGC	1 cut(s)	1384
AspS9I	GGNCC	3 cut(s)	537, 1894, 2042
AsuC2I	CCSGG	1 cut(s)	2283
AsuHPI	GGTGA	3 cut(s)	236, 849, 1715
AsuII	TTCGAA	1 cut(s)	1915
AsuNHI	GCTAGC	1 cut(s)	2348
AvaI	CYCGRG	1 cut(s)	2157
AvaII	GGWCC	1 cut(s)	2042
AvrII	CCTAGG	1 cut(s)	754
BaeGI	GKGCMC	1 cut(s)	554
BaeI	ACNNNNGTAYC	2 cut(s)	1410, 1443
BalI	TGGCCA	2 cut(s)	81, 2477
BamHI	GGATCC	2 cut(s)	1106, 1729
BanII	GRGCYC	1 cut(s)	1306
BarI	GAAGNNNNNNTAC	2 cut(s)	604, 636
BbrPI	CACGTG	1 cut(s)	1063
BbsI	GAAGAC	3 cut(s)	333, 411, 2013
Bbv12I	GWGCWC	4 cut(s)	670, 1363, 2097, 2522
BbvI	GCAGC	5 cut(s)	1536, 1610, 2084, 2442, 2470
BceAI	ACGGC	2 cut(s)	2190, 2471
BcgI	CGANNNNNNTGC	4 cut(s)	1905, 1939, 2379, 2413
BciT130I	CCWGG	6 cut(s)	783, 1622, 1655, 1727, 2048, 2124
BciVI	GTATCC	1 cut(s)	780
BclI	TGATCA	1 cut(s)	214
BcnI	CCSGG	1 cut(s)	2283
BcoDI	GTCTC	4 cut(s)	1291, 1520, 1598, 2154
BfaI	CTAG	9 cut(s)	755, 870, 1050, 1173, 1364, 1739, 2076, 2349, 2420
BfmI	CTRYAG	4 cut(s)	632, 987, 1442, 1806
BfuAI	ACCTGC	2 cut(s)	9, 571
BfuI	GTATCC	1 cut(s)	780
BglII	AGATCT	3 cut(s)	587, 1507, 1741
BisI	GCNGC	5 cut(s)	1525, 1599, 2073, 2431, 2484
BlnI	CCTAGG	1 cut(s)	754
BlsI	GCNGC	5 cut(s)	1526, 1600, 2074, 2432, 2485
BmcAI	AGTACT	1 cut(s)	1843
Bme1390I	CCNGG	7 cut(s)	783, 1622, 1655, 1727, 2048, 2124, 2283
Bme18I	GGWCC	1 cut(s)	2042
BmeT110I	CYCGRG	1 cut(s)	2157
BmgBI	CACGTC	1 cut(s)	1402
BmgT120I	GGNCC	3 cut(s)	537, 1894, 2042
BmiI	GGNNCC	7 cut(s)	133, 366, 444, 528, 1108, 1731, 2044
BmrFI	CCNGG	7 cut(s)	783, 1622, 1655, 1727, 2048, 2124, 2283
BmrI	ACTGGG	5 cut(s)	345, 423, 468, 1300, 1491
BmtI	GCTAGC	1 cut(s)	2352
BmuI	ACTGGG	5 cut(s)	345, 423, 468, 1300, 1491
BpiI	GAAGAC	3 cut(s)	333, 411, 2013
BpmI	CTGGAG	1 cut(s)	1171
Bpu14I	TTCGAA	1 cut(s)	1915
BpuEI	CTTGAG	6 cut(s)	303, 381, 481, 722, 2273, 2563
BpuMI	CCSGG	1 cut(s)	2283
Bsa29I	ATCGAT	1 cut(s)	1019
BsaAI	YACGTR	2 cut(s)	1063, 2098
BsaBI	GATNNNNATC	2 cut(s)	231, 603
BsaI	GGTCTC	1 cut(s)	1520
BsaJI	CCNNGG	6 cut(s)	754, 782, 1785, 2046, 2047, 2281
BsaWI	WCCGGW	2 cut(s)	1853, 2553
BsaXI	ACNNNNNCTCC	2 cut(s)	1059, 1089
Bsc4I	CCNNNNNNNGG	6 cut(s)	335, 413, 1347, 1660, 1967, 2556
Bse118I	RCCGGY	1 cut(s)	2455
Bse3DI	GCAATG	2 cut(s)	2466, 2478
Bse8I	GATNNNNATC	2 cut(s)	231, 603
BseBI	CCWGG	6 cut(s)	783, 1622, 1655, 1727, 2048, 2124
BseCI	ATCGAT	1 cut(s)	1019
BseDI	CCNNGG	6 cut(s)	754, 782, 1785, 2046, 2047, 2281
BseGI	GGATG	9 cut(s)	511, 1166, 1182, 1414, 1591, 1617, 1861, 2110, 2192
BseJI	GATNNNNATC	2 cut(s)	231, 603
BseLI	CCNNNNNNNGG	6 cut(s)	335, 413, 1347, 1660, 1967, 2556
BseMI	GCAATG	2 cut(s)	2466, 2478
BseMII	CTCAG	7 cut(s)	170, 833, 866, 896, 1287, 1531, 1593
BseRI	GAGGAG	4 cut(s)	106, 1083, 1889, 2049
BseSI	GKGCMC	1 cut(s)	554
BseXI	GCAGC	5 cut(s)	1536, 1610, 2084, 2442, 2470
BsgI	GTGCAG	2 cut(s)	339, 417
Bsh1236I	CGCG	1 cut(s)	14
BshVI	ATCGAT	1 cut(s)	1019
BsiHKAI	GWGCWC	4 cut(s)	670, 1363, 2097, 2522
BsiHKCI	CYCGRG	1 cut(s)	2157
BsiSI	CCGG	4 cut(s)	1854, 2283, 2456, 2554
BslFI	GGGAC	2 cut(s)	772, 2028
BslI	CCNNNNNNNGG	6 cut(s)	335, 413, 1347, 1660, 1967, 2556
BsmAI	GTCTC	4 cut(s)	1291, 1520, 1598, 2154
BsmFI	GGGAC	2 cut(s)	772, 2028
Bso31I	GGTCTC	1 cut(s)	1520
BsoBI	CYCGRG	1 cut(s)	2157
Bsp119I	TTCGAA	1 cut(s)	1915
Bsp1286I	GDGCHC	6 cut(s)	554, 670, 1306, 1363, 2097, 2522
Bsp1407I	TGTACA	2 cut(s)	1200, 2448
Bsp19I	CCATGG	1 cut(s)	1785
BspACI	CCGC	2 cut(s)	14, 898
BspCNI	CTCAG	7 cut(s)	171, 832, 865, 895, 1288, 1530, 1594
BspDI	ATCGAT	1 cut(s)	1019
BspFNI	CGCG	1 cut(s)	14
BspHI	TCATGA	1 cut(s)	1792
BspLI	GGNNCC	7 cut(s)	133, 366, 444, 528, 1108, 1731, 2044
BspMI	ACCTGC	2 cut(s)	9, 571
BspOI	GCTAGC	1 cut(s)	2352
BspQI	GCTCTTC	1 cut(s)	248
BspT104I	TTCGAA	1 cut(s)	1915
BspTNI	GGTCTC	1 cut(s)	1520
BsrDI	GCAATG	2 cut(s)	2466, 2478
BsrFI	RCCGGY	1 cut(s)	2455
BsrGI	TGTACA	2 cut(s)	1200, 2448
BssAI	RCCGGY	1 cut(s)	2455
BssECI	CCNNGG	6 cut(s)	754, 782, 1785, 2046, 2047, 2281
BssNAI	GTATAC	1 cut(s)	1170
BssT1I	CCWWGG	2 cut(s)	754, 1785
Bst1107I	GTATAC	1 cut(s)	1170
Bst2UI	CCWGG	6 cut(s)	783, 1622, 1655, 1727, 2048, 2124
Bst6I	CTCTTC	4 cut(s)	47, 248, 2067, 2386
BstAUI	TGTACA	2 cut(s)	1200, 2448
BstBAI	YACGTR	2 cut(s)	1063, 2098
BstBI	TTCGAA	1 cut(s)	1915
BstC8I	GCNNGC	7 cut(s)	16, 79, 130, 1878, 2309, 2350, 2457
BstDEI	CTNAG	8 cut(s)	179, 819, 852, 882, 1219, 1296, 1517, 1602
BstDSI	CCRYGG	1 cut(s)	1785
BstEII	GGTNACC	1 cut(s)	1721
BstF5I	GGATG	9 cut(s)	511, 1166, 1182, 1414, 1591, 1617, 1861, 2110, 2192
BstFNI	CGCG	1 cut(s)	14
BstHHI	GCGC	1 cut(s)	1384
BstMAI	GTCTC	4 cut(s)	1291, 1520, 1598, 2154
BstMWI	GCNNNNNNNGC	7 cut(s)	125, 269, 897, 1388, 1438, 1595, 2483
BstNI	CCWGG	6 cut(s)	783, 1622, 1655, 1727, 2048, 2124
BstNSI	RCATGY	1 cut(s)	2267
BstPI	GGTNACC	1 cut(s)	1721
BstSCI	CCNGG	7 cut(s)	781, 1620, 1653, 1725, 2046, 2122, 2281
BstSFI	CTRYAG	4 cut(s)	632, 987, 1442, 1806
BstSLI	GKGCMC	1 cut(s)	554
BstUI	CGCG	1 cut(s)	14
BstV1I	GCAGC	5 cut(s)	1536, 1610, 2084, 2442, 2470
BstV2I	GAAGAC	3 cut(s)	333, 411, 2013
BstX2I	RGATCY	7 cut(s)	232, 587, 1106, 1507, 1627, 1729, 1741
BstYI	RGATCY	7 cut(s)	232, 587, 1106, 1507, 1627, 1729, 1741
BstZ17I	GTATAC	1 cut(s)	1170
Bsu15I	ATCGAT	1 cut(s)	1019
BsuI	GTATCC	1 cut(s)	780
BsuTUI	ATCGAT	1 cut(s)	1019
BtgI	CCRYGG	1 cut(s)	1785
BtrI	CACGTC	1 cut(s)	1402
BtsCI	GGATG	9 cut(s)	511, 1166, 1182, 1414, 1591, 1617, 1861, 2110, 2192
BtsI	GCAGTG	1 cut(s)	114
BtsIMutI	CAGTG	9 cut(s)	114, 333, 411, 554, 832, 1451, 2286, 2358, 2441
BveI	ACCTGC	2 cut(s)	9, 571
Cac8I	GCNNGC	7 cut(s)	16, 79, 130, 1878, 2309, 2350, 2457
CaiI	CAGNNNCTG	2 cut(s)	235, 1631
CciI	TCATGA	1 cut(s)	1792
CfoI	GCGC	1 cut(s)	1384
Cfr10I	RCCGGY	1 cut(s)	2455
Cfr13I	GGNCC	3 cut(s)	537, 1894, 2042
ClaI	ATCGAT	1 cut(s)	1019
Csp6I	GTAC	5 cut(s)	276, 1201, 1842, 2166, 2449
CviQI	GTAC	5 cut(s)	276, 1201, 1842, 2166, 2449
DdeI	CTNAG	8 cut(s)	179, 819, 852, 882, 1219, 1296, 1517, 1602
DraI	TTTAAA	3 cut(s)	714, 910, 2026
EaeI	YGGCCR	2 cut(s)	79, 2475
Eam1104I	CTCTTC	4 cut(s)	47, 248, 2067, 2386
EarI	CTCTTC	4 cut(s)	47, 248, 2067, 2386
Eco130I	CCWWGG	2 cut(s)	754, 1785
Eco147I	AGGCCT	1 cut(s)	481
Eco24I	GRGCYC	1 cut(s)	1306
Eco31I	GGTCTC	1 cut(s)	1520
Eco32I	GATATC	3 cut(s)	975, 1263, 2278
Eco47I	GGWCC	1 cut(s)	2042
Eco57I	CTGAAG	5 cut(s)	293, 371, 576, 609, 2547
Eco72I	CACGTG	1 cut(s)	1063
Eco88I	CYCGRG	1 cut(s)	2157
Eco91I	GGTNACC	1 cut(s)	1721
EcoO65I	GGTNACC	1 cut(s)	1721
EcoRI	GAATTC	1 cut(s)	832
EcoRII	CCWGG	6 cut(s)	781, 1620, 1653, 1725, 2046, 2122
EcoRV	GATATC	3 cut(s)	975, 1263, 2278
EcoT14I	CCWWGG	2 cut(s)	754, 1785
EcoT22I	ATGCAT	3 cut(s)	1026, 2194, 2383
EcoT38I	GRGCYC	1 cut(s)	1306
ErhI	CCWWGG	2 cut(s)	754, 1785
FalI	AAGNNNNNCTT	2 cut(s)	1805, 1837
FaqI	GGGAC	2 cut(s)	772, 2028
FauI	CCCGC	1 cut(s)	7
FauNDI	CATATG	2 cut(s)	724, 2182
FbaI	TGATCA	1 cut(s)	214
FblI	GTMKAC	2 cut(s)	631, 1169
Fnu4HI	GCNGC	5 cut(s)	1525, 1599, 2073, 2431, 2484
FokI	GGATG	9 cut(s)	518, 1173, 1189, 1421, 1598, 1604, 1848, 2117, 2179
FriOI	GRGCYC	1 cut(s)	1306
Fsp4HI	GCNGC	5 cut(s)	1525, 1599, 2073, 2431, 2484
FspBI	CTAG	9 cut(s)	755, 870, 1050, 1173, 1364, 1739, 2076, 2349, 2420
GlaI	GCGC	1 cut(s)	1383
GluI	GCNGC	5 cut(s)	1525, 1599, 2073, 2431, 2484
GsuI	CTGGAG	1 cut(s)	1171
HapII	CCGG	4 cut(s)	1854, 2283, 2456, 2554
HhaI	GCGC	1 cut(s)	1384
Hin6I	GCGC	1 cut(s)	1382
HinP1I	GCGC	1 cut(s)	1382
HincII	GTYRAC	1 cut(s)	2055
HindII	GTYRAC	1 cut(s)	2055
HindIII	AAGCTT	3 cut(s)	1389, 1826, 2142
HinfI	GANTC	9 cut(s)	731, 797, 839, 878, 886, 1455, 1491, 1976, 2056
HpaII	CCGG	4 cut(s)	1854, 2283, 2456, 2554
HphI	GGTGA	3 cut(s)	236, 849, 1715
Hpy166II	GTNNAC	7 cut(s)	326, 404, 632, 1170, 1201, 2055, 2449
Hpy8I	GTNNAC	7 cut(s)	326, 404, 632, 1170, 1201, 2055, 2449
HpyAV	CCTTC	9 cut(s)	41, 217, 492, 663, 1340, 1361, 1875, 1994, 2560
HpyCH4IV	ACGT	4 cut(s)	1062, 1401, 1995, 2097
HpyF10VI	GCNNNNNNNGC	7 cut(s)	125, 269, 897, 1388, 1438, 1595, 2483
HpyF3I	CTNAG	8 cut(s)	179, 819, 852, 882, 1219, 1296, 1517, 1602
HpySE526I	ACGT	4 cut(s)	1062, 1401, 1995, 2097
HspAI	GCGC	1 cut(s)	1382
KroI	GCCGGC	1 cut(s)	2455
KroNI	GCCGGC	1 cut(s)	2457
Ksp22I	TGATCA	1 cut(s)	214
LguI	GCTCTTC	1 cut(s)	248
LmnI	GCTCC	3 cut(s)	137, 673, 2560
Lsp1109I	GCAGC	5 cut(s)	1536, 1610, 2084, 2442, 2470
MaeI	CTAG	9 cut(s)	755, 870, 1050, 1173, 1364, 1739, 2076, 2349, 2420
MaeII	ACGT	4 cut(s)	1062, 1401, 1995, 2097
MaeIII	GTNAC	9 cut(s)	682, 696, 769, 855, 1350, 1477, 1721, 2207, 2439
MfeI	CAATTG	1 cut(s)	1278
MflI	RGATCY	7 cut(s)	232, 587, 1106, 1507, 1627, 1729, 1741
MhlI	GDGCHC	6 cut(s)	554, 670, 1306, 1363, 2097, 2522
MlsI	TGGCCA	2 cut(s)	81, 2477
MluNI	TGGCCA	2 cut(s)	81, 2477
MlyI	GAGTC	2 cut(s)	833, 2050
MmeI	TCCRAC	3 cut(s)	483, 695, 1560
Mox20I	TGGCCA	2 cut(s)	81, 2477
Mph1103I	ATGCAT	3 cut(s)	1026, 2194, 2383
MroNI	GCCGGC	1 cut(s)	2455
MroXI	GAANNNNTTC	1 cut(s)	589
MscI	TGGCCA	2 cut(s)	81, 2477
Msp20I	TGGCCA	2 cut(s)	81, 2477
MspA1I	CMGCKG	1 cut(s)	1601
MspI	CCGG	4 cut(s)	1854, 2283, 2456, 2554
MspR9I	CCNGG	7 cut(s)	783, 1622, 1655, 1727, 2048, 2124, 2283
MunI	CAATTG	1 cut(s)	1278
MvaI	CCWGG	6 cut(s)	783, 1622, 1655, 1727, 2048, 2124
MvnI	CGCG	1 cut(s)	14
MwoI	GCNNNNNNNGC	7 cut(s)	125, 269, 897, 1388, 1438, 1595, 2483
NaeI	GCCGGC	1 cut(s)	2457
NciI	CCSGG	1 cut(s)	2283
NcoI	CCATGG	1 cut(s)	1785
NdeI	CATATG	2 cut(s)	724, 2182
NgoMIV	GCCGGC	1 cut(s)	2455
NheI	GCTAGC	1 cut(s)	2348
NlaIV	GGNNCC	7 cut(s)	133, 366, 444, 528, 1108, 1731, 2044
NmuCI	GTSAC	4 cut(s)	769, 855, 1721, 2439
NsiI	ATGCAT	3 cut(s)	1026, 2194, 2383
NspI	RCATGY	1 cut(s)	2267
NspV	TTCGAA	1 cut(s)	1915
PaeR7I	CTCGAG	1 cut(s)	2157
PagI	TCATGA	1 cut(s)	1792
PasI	CCCWGGG	1 cut(s)	2047
PceI	AGGCCT	1 cut(s)	481
PciSI	GCTCTTC	1 cut(s)	248
PdiI	GCCGGC	1 cut(s)	2457
PdmI	GAANNNNTTC	1 cut(s)	589
PfeI	GAWTC	7 cut(s)	731, 797, 878, 886, 1455, 1491, 1976
PflFI	GACNNNGTC	1 cut(s)	1719
PflMI	CCANNNNNTGG	1 cut(s)	1660
PfoI	TCCNGGA	1 cut(s)	2122
PkrI	GCNGC	5 cut(s)	1526, 1600, 2074, 2432, 2485
PleI	GAGTC	2 cut(s)	833, 2050
PmaCI	CACGTG	1 cut(s)	1063
PmlI	CACGTG	1 cut(s)	1063
PpsI	GAGTC	2 cut(s)	833, 2050
Ppu21I	YACGTR	2 cut(s)	1063, 2098
PshBI	ATTAAT	2 cut(s)	167, 2384
Psp6I	CCWGG	6 cut(s)	781, 1620, 1653, 1725, 2046, 2122
PspCI	CACGTG	1 cut(s)	1063
PspEI	GGTNACC	1 cut(s)	1721
PspGI	CCWGG	6 cut(s)	781, 1620, 1653, 1725, 2046, 2122
PspN4I	GGNNCC	7 cut(s)	133, 366, 444, 528, 1108, 1731, 2044
PspPI	GGNCC	3 cut(s)	537, 1894, 2042
PstNI	CAGNNNCTG	2 cut(s)	235, 1631
PsuI	RGATCY	7 cut(s)	232, 587, 1106, 1507, 1627, 1729, 1741
PsyI	GACNNNGTC	1 cut(s)	1719
PvuII	CAGCTG	1 cut(s)	1601
RsaI	GTAC	5 cut(s)	277, 1202, 1843, 2167, 2450
RsaNI	GTAC	5 cut(s)	276, 1201, 1842, 2166, 2449
SapI	GCTCTTC	1 cut(s)	248
SatI	GCNGC	5 cut(s)	1525, 1599, 2073, 2431, 2484
Sau96I	GGNCC	3 cut(s)	537, 1894, 2042
ScaI	AGTACT	1 cut(s)	1843
SchI	GAGTC	2 cut(s)	833, 2050
ScrFI	CCNGG	7 cut(s)	783, 1622, 1655, 1727, 2048, 2124, 2283
SduI	GDGCHC	6 cut(s)	554, 670, 1306, 1363, 2097, 2522
SfcI	CTRYAG	4 cut(s)	632, 987, 1442, 1806
Sfr274I	CTCGAG	1 cut(s)	2157
SfuI	TTCGAA	1 cut(s)	1915
SinI	GGWCC	1 cut(s)	2042
SlaI	CTCGAG	1 cut(s)	2157
SmiI	ATTTAAAT	1 cut(s)	714
SmlI	CTYRAG	7 cut(s)	318, 396, 496, 701, 2157, 2252, 2578
SmoI	CTYRAG	7 cut(s)	318, 396, 496, 701, 2157, 2252, 2578
SseBI	AGGCCT	1 cut(s)	481
SsiI	CCGC	2 cut(s)	14, 898
SspI	AATATT	1 cut(s)	1638
SspMI	CTAG	9 cut(s)	755, 870, 1050, 1173, 1364, 1739, 2076, 2349, 2420
StuI	AGGCCT	1 cut(s)	481
StyD4I	CCNGG	7 cut(s)	781, 1620, 1653, 1725, 2046, 2122, 2281
StyI	CCWWGG	2 cut(s)	754, 1785
SwaI	ATTTAAAT	1 cut(s)	714
TaiI	ACGT	4 cut(s)	1065, 1404, 1998, 2100
TaqI	TCGA	5 cut(s)	966, 1019, 1088, 1915, 2158
TatI	WGTACW	4 cut(s)	1200, 1841, 2165, 2448
TfiI	GAWTC	7 cut(s)	731, 797, 878, 886, 1455, 1491, 1976
TscAI	CASTG	9 cut(s)	121, 340, 418, 554, 832, 1451, 2293, 2365, 2448
TseFI	GTSAC	4 cut(s)	769, 855, 1721, 2439
TseI	GCWGC	5 cut(s)	1524, 1598, 2072, 2430, 2483
Tsp45I	GTSAC	4 cut(s)	769, 855, 1721, 2439
TspDTI	ATGAA	9 cut(s)	14, 60, 159, 948, 1483, 1682, 1689, 2054, 2527
TspGWI	ACGGA	2 cut(s)	1035, 1858
TspRI	CASTG	9 cut(s)	121, 340, 418, 554, 832, 1451, 2293, 2365, 2448
Tth111I	GACNNNGTC	1 cut(s)	1719
Van91I	CCANNNNNTGG	1 cut(s)	1660
VpaK11BI	GGWCC	1 cut(s)	2042
VspI	ATTAAT	2 cut(s)	167, 2384
XapI	RAATTY	1 cut(s)	832
XbaI	TCTAGA	2 cut(s)	1049, 1363
XceI	RCATGY	1 cut(s)	2267
XhoI	CTCGAG	1 cut(s)	2157
XmaJI	CCTAGG	1 cut(s)	754
XmiI	GTMKAC	2 cut(s)	631, 1169
XmnI	GAANNNNTTC	1 cut(s)	589
XspI	CTAG	9 cut(s)	755, 870, 1050, 1173, 1364, 1739, 2076, 2349, 2420
ZrmI	AGTACT	1 cut(s)	1843
Zsp2I	ATGCAT	3 cut(s)	1026, 2194, 2383

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.