Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0001572

Physical Location & Seq

Genomic Coordinates Forward (+)

10949769 .. 10956129

Gene Structure 6361 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1141400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3105 bp

ATGGAGTCTGAATTCGGAGGAAAGGCTTGTAATTTTCGTGGTGTGATGGTGCCGAATTTGAAGGGGGTTGGGAAAAAGAGTTTGGAATGGGATTTGAATGATTTTAAATGGGATGGTGATCTTTTTACTGCTAGTCCATTAAATTCTACACCATCTGATGGTAGGAGTAGGCAGTTGTTTCCGGCCAGGCCAGAAACTCCGTCGGATGCTGGTTTGTCCAACAGTTCTTCTTCTGGTTCGGATAATATCAGTCCGGGGAATGAGAAAGATCAAAGAGAATTGGAGAAACGGAGAAGGGATTTTTTTGTGGAAAACCGAGAGTTGAATGATGAAGCTGCGTCTCTGAATCTTAAACTTGGCGGGCAAACTTACCCCATTATGGAAGAAGAAGTACAAACCGGGAAGAAAACAAAGACAATTGGGACTACTTCAAACCGTGCAGTTTGTCAGGTGGAGGACTGTAAGGCTGATCTTAGCAATGCCAAGGATTATCACCGGAGGCATAAGGTCTGTGCTATGCATTCTAAGGCAACTAAAGCGCTGGTTGGAAGTGTTATGCAGCGGTTCTGTCAACAGTGTAGCAGGTTTCATGCTCTTCAAGAGTTTGATGAAGGGAAGAGAAGTTGCCGTAGGCGTTTGGCTGGCCATAATAGGAGGAGAAGAAAAACACATCCTGATACTGCAGTTAATGGAGGCTCTTTAAACAATGAAGGCGGAAGCGGTTATCTATTGATTAGCTTGCTGAGAATACTTTCAAATATGCACTCTAGTAGTTCTGATCAAACAAAGGATCAGGATGTCATATCTCATTTGTTGAGGAGCTTAGCCAATGTTGCTGGTACGGCTGATGGAAGAAACATATCTACATTGCTGCAGGGATCTCAAGGTTTATTTAACAGTGGGACATCTGTCCAGACTGCACGAAGGGTTCTAGATATGAATGCTGGTGTTAATACTGAGGACCCTTTAAGGTCTAAAGGACACTGTTCGATACTACCTGCATCAAGAGACAGTTCTGAATCCAAATCAGTTACACCGGAAGCTACAAGTAGAAGGTTCCAGTTAAATGACATTGATTTAAATAGTACATATGATGATTCACAGGACTATGTAGAGAACCTAGGGAATTCTCATGTTCCTGCAAGTCCAGGCACTGCATCTCTTGGTTTTCCTTCATGGATGCAGCGTGATTCTCATAAATCAAGCCCACCTCAGACAAGTGGGAATTCAGACTTAACTTCTACTCAGTCACCGTCAAGTTCTAGTGGAGAAGCTCAGAGTCACACAGACCGAATTATTTTTAAACTATTTGGAAAAGACCCTAATGAACTTCCACTTGCTCTGCGATCACAGATCCTCGACTGGTTATCTCACAGCCCTACCAACATTGAAAGCTACATAAGGCCGGGCTGTATCATTTTGACAATTTACCTTCGTCTAGAAAAATCCACGTGGGAGGAGGTATTCTCGACTGTGGATGGCAGATCCTTGTATGAGGAAGACTTTTTCTTCAAGTCCTTAATTTTGACAATTCACCTCTCCCAGACCCTGATTAAAGCGGGAGCCTTGTGCACTGGGTACGACCTTTTTTTTTATAATTATTTTTGCTTACAGTTCTGTTGTCATCTGGGATCCAGTTTGAAAACACTTCTTGATGCTGCGGATGATCCTTTTTGGAGAACAGGATGGGTGTATACAAGGGTGCAAGATTATGTAGCATTTACATACAATGGTGAAGTTGTGTTAGACACACCCTTGCCTCTTAAAAGCAATAAAAGTTGCAGGATATCATGCATCAAACCAATTGCGATCTCCTTATCTGAGAGAGCTGAATTTATAGTAAAAGGCTTTAACCTTTCTAGTTCCACCACAAGGTTACTCTGTGCTCTAGAAGGGAAGTATCTGGCTCAAGAAACTTGTTATGACTTGTTGGATGATGCGGATAGCACTGTTGAGGATGACGAACAACAATGCCTTAAATTCTCCTGCTCTATACCAAATGTTACTGGGCGAGGATTCATTGAGGTTGAAGATCATGGTCTCAGCAGTAGCTTCTTTCCATTTATAGTTGCAGAGCAGGAAGTATGCTCTGAGATTTGTATGCTGGAAGATGTGATTGAGGTGTCCGAGACTGATGATGATATCCAATCTGGACCTGAAAAAGTGGAAGCTAAGAACCAAGCCTTGGACTTTATACATGAATTGGGTTGGCTCCTACATAGAAGTCGCGTTAAGTTTAGACTGGGTCAATTGGATCCCAATCTAGATACATTTCCCTTTAGACGGTTCAGATTGCTCATGGAGTTCTCCATTGACCATGATTGGTGTGCTGTGGTGAAGAAACTCTTGGGCATTCTGTTTGATGGTACTGTCGACGCTGCAGAGCATCCTTCCCTTGAGTCTGCACTACTGGATATGGGCCTCCTCCACAGAGCTGTGCGAATCAATAGCAGACGTATGGTGGAATTCTTGTTAAGATTTGTCCCAGGTTTAACAGGATCTGAGCAGAAGGAACAAGTTGACAGGGACGGCAACAGTTTCTTGTTTAAACCTGATGTTGTTGGGCCCATGGGGTTGACTCCTCTTCATATTGCCGCCAGTACTGATGGCTGTGAGCAAGTATTGGATGCCTTAACTGATGATCCTGGAAAGGTGGGAATTAAAGCATGGAAAAACACTCGAGACAGCACAGGATTGACACCATATGATTATGCATGCCTTCGAAGCCGCTACTCCTATGTCCATATAGTCCAGCGGAAAATCAGCAATACACTGGAAAGCGGGCATGTGGTGCTTGACATCCCTGGCCTCACGTTAGACAGAAATGGAAAGCAGAAGCAATCGGATGCGCATAAATCATCAAGAGTAGCCAGCTTGGAAACTGAAAGGAATGATATAAAAGCAATCTTACGACACTGCAGGTTATGTGAACAGAAACCAGCTTATAGCACCACACGGTCACTTGTATACAGGCCGGCAATGCTGTCATTGGTGGCTGTCGCTGCTGTCTGCGTTTGCGTGGCCTTGCTCTTTAAAAGCAATCCGGAAGTTGTTTTCGTGTTGGAGCCATTCCGGTGGGAACACTTGAAGTTTGGTTCAAGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SBP

Protein Analysis

1035

Amino Acids

115.22

Weight (kDa)

6.07

Isoelectric Point (pI)

52.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SBP	PF03110	149 - 222	5e-30	SBP domain
Ig_SPL7	PF26102	590 - 701	7.2e-44	SPL7-like, immunoglobulin-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001572)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47070 AT2G47070 AT3G60030
fragaria_vesca	FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420
malus_domestica	MD13G1141300.v1.1 MD13G1141400.v1.1 MD16G1137600.v1.1 MD16G1137700.v1.1
prunus_persica	Prupe.1G106500_v2.0.a1 Prupe.1G106500_v2.0.a1 Prupe.1G106600_v2.0.a1
pyrus_communis	pycom13g12280 pycom13g12290 pycom16g12140 pycom16g12150 pycom16g12160
rosa_chinensis	RchiOBHm_Chr4g0427341 RchiOBHm_Chr4g0427351
rosa_laevigata	RLG00000007250 RLG00000007251
rosa_multiflora	Rmu_sc0003813.1_g000017 Rmu_sc0003813.1_g000018
rosa_roxburghii	Rroxscaffold_5G00369020 Rroxscaffold_5G00369030
rosa_rugosa	Rorug04G0216800
rosa_samantha	Rh4AG273100 Rh4AG273300 Rh4BG278800 Rh4BG278900 Rh4CG294100 Rh4CG294200 Rh4DG276200 Rh4DG276300
rosa_wichuraiana	Rw4G023700 Rw4G023710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1596
Acc16I	TGCGCA	1 cut(s)	2850
Acc36I	ACCTGC	3 cut(s)	573, 1006, 2910
AccB1I	GGYRCC	1 cut(s)	49
AccB7I	CCANNNNNTGG	2 cut(s)	158, 2185
AccI	GTMKAC	3 cut(s)	1694, 2373, 2967
AccII	CGCG	1 cut(s)	2229
AccIII	TCCGGA	1 cut(s)	3043
AcoI	YGGCCR	2 cut(s)	183, 643
AcsI	RAATTY	8 cut(s)	11, 55, 142, 1126, 1225, 1832, 1979, 2465
AcvI	CACGTG	1 cut(s)	1452
AfaI	GTAC	6 cut(s)	393, 841, 1087, 1580, 2368, 2602
AfeI	AGCGCT	1 cut(s)	540
AfiI	CCNNNNNNNGG	5 cut(s)	158, 379, 1872, 2185, 2283
AjnI	CCWGG	5 cut(s)	185, 1147, 2485, 2644, 2803
AjuI	GAANNNNNNNTTGG	6 cut(s)	65, 97, 2168, 2200, 2330, 2362
Alw21I	GWGCWC	2 cut(s)	1574, 1888
Alw26I	GTCTC	5 cut(s)	345, 1002, 2045, 2123, 2676
Alw44I	GTGCAC	1 cut(s)	1570
AlwNI	CAGNNNCTG	3 cut(s)	1154, 1549, 2501
Ama87I	CYCGRG	1 cut(s)	2679
Aor13HI	TCCGGA	1 cut(s)	3043
Aor51HI	AGCGCT	1 cut(s)	540
AoxI	GGCC	9 cut(s)	183, 188, 643, 1403, 2419, 2564, 2806, 2972, 3021
ApaI	GGGCCC	1 cut(s)	2568
ApaLI	GTGCAC	1 cut(s)	1570
ApeKI	GCWGC	7 cut(s)	335, 559, 871, 1183, 1658, 2378, 3002
ApoI	RAATTY	8 cut(s)	11, 55, 142, 1126, 1225, 1832, 1979, 2465
Asp700I	GAANNNNTTC	1 cut(s)	751
AspA2I	CCTAGG	1 cut(s)	1120
AspLEI	GCGC	2 cut(s)	541, 2851
AspS9I	GGNCC	5 cut(s)	961, 2153, 2419, 2564, 2565
AsuC2I	CCSGG	3 cut(s)	255, 400, 1407
AsuHPI	GGTGA	6 cut(s)	128, 485, 1242, 1526, 1745, 2347
AsuII	TTCGAA	1 cut(s)	2722
AvaI	CYCGRG	1 cut(s)	2679
AvaII	GGWCC	2 cut(s)	961, 2153
AvrII	CCTAGG	1 cut(s)	1120
BaeGI	GKGCMC	2 cut(s)	1574, 2568
BaeI	ACNNNNGTAYC	2 cut(s)	669, 702
BalI	TGGCCA	1 cut(s)	645
BamHI	GGATCC	2 cut(s)	1631, 2254
BanI	GGYRCC	1 cut(s)	49
BanII	GRGCYC	1 cut(s)	2568
BarI	GAAGNNNNNNTAC	2 cut(s)	375, 407
BbrPI	CACGTG	1 cut(s)	1452
BbsI	GAAGAC	1 cut(s)	1506
Bbv12I	GWGCWC	2 cut(s)	1574, 1888
BbvI	GCAGC	7 cut(s)	322, 571, 858, 1195, 1645, 2365, 2989
BccI	CCATC	9 cut(s)	40, 107, 152, 160, 842, 1472, 1680, 2357, 2600
BceAI	ACGGC	3 cut(s)	612, 858, 2545
BciT130I	CCWGG	5 cut(s)	187, 1149, 2487, 2646, 2805
BclI	TGATCA	1 cut(s)	778
BcnI	CCSGG	3 cut(s)	255, 400, 1407
BcoDI	GTCTC	5 cut(s)	345, 1002, 2045, 2123, 2676
BfaI	CTAG	9 cut(s)	132, 768, 932, 1121, 1263, 1439, 1860, 1889, 2264
BfmI	CTRYAG	4 cut(s)	681, 872, 2379, 2917
BfoI	RGCGCY	1 cut(s)	542
BfuAI	ACCTGC	3 cut(s)	573, 1006, 2910
BisI	GCNGC	9 cut(s)	336, 560, 872, 1184, 1659, 2379, 2595, 2728, 3003
BlnI	CCTAGG	1 cut(s)	1120
BlpI	GCTNAGC	1 cut(s)	823
BlsI	GCNGC	9 cut(s)	337, 561, 873, 1185, 1660, 2380, 2596, 2729, 3004
BmcAI	AGTACT	1 cut(s)	2602
Bme1390I	CCNGG	8 cut(s)	187, 255, 400, 1149, 1407, 2487, 2646, 2805
Bme18I	GGWCC	2 cut(s)	961, 2153
BmeT110I	CYCGRG	1 cut(s)	2679
BmgT120I	GGNCC	5 cut(s)	961, 2153, 2419, 2564, 2565
BmiI	GGNNCC	9 cut(s)	51, 963, 1058, 1564, 1633, 2213, 2256, 2566, 3066
BmrFI	CCNGG	8 cut(s)	187, 255, 400, 1149, 1407, 2487, 2646, 2805
BmrI	ACTGGG	3 cut(s)	1584, 2016, 2252
BmuI	ACTGGG	3 cut(s)	1584, 2016, 2252
BoxI	GACNNNNGTC	1 cut(s)	908
BpiI	GAAGAC	1 cut(s)	1506
BplI	GAGNNNNNCTC	2 cut(s)	1451, 1483
Bpu1102I	GCTNAGC	1 cut(s)	823
Bpu14I	TTCGAA	1 cut(s)	2722
BpuEI	CTTGAG	3 cut(s)	867, 1893, 2417
BpuMI	CCSGG	3 cut(s)	255, 400, 1407
BsaAI	YACGTR	1 cut(s)	1452
BsaBI	GATNNNNATC	2 cut(s)	117, 2259
BsaI	GGTCTC	1 cut(s)	2045
BsaJI	CCNNGG	7 cut(s)	254, 483, 1120, 2184, 2485, 2568, 2803
BsaWI	WCCGGW	4 cut(s)	495, 1036, 3043, 3072
Bsc4I	CCNNNNNNNGG	5 cut(s)	158, 379, 1872, 2185, 2283
Bse118I	RCCGGY	1 cut(s)	2974
Bse1I	ACTGG	9 cut(s)	1060, 1367, 1579, 1635, 2011, 2247, 2415, 2598, 2778
Bse3DI	GCAATG	3 cut(s)	484, 866, 2985
Bse8I	GATNNNNATC	2 cut(s)	117, 2259
BseAI	TCCGGA	1 cut(s)	3043
BseBI	CCWGG	5 cut(s)	187, 1149, 2487, 2646, 2805
BseDI	CCNNGG	7 cut(s)	254, 483, 1120, 2184, 2485, 2568, 2803
BseJI	GATNNNNATC	2 cut(s)	117, 2259
BseLI	CCNNNNNNNGG	5 cut(s)	158, 379, 1872, 2185, 2283
BseMI	GCAATG	3 cut(s)	484, 866, 2985
BseMII	CTCAG	9 cut(s)	734, 948, 1226, 1259, 1289, 1812, 2056, 2082, 2493
BseNI	ACTGG	9 cut(s)	1060, 1367, 1579, 1635, 2011, 2247, 2415, 2598, 2778
BseRI	GAGGAG	5 cut(s)	670, 832, 1472, 2414, 2571
BseSI	GKGCMC	2 cut(s)	1574, 2568
BseXI	GCAGC	7 cut(s)	322, 571, 858, 1195, 1645, 2365, 2989
BsgI	GTGCAG	3 cut(s)	459, 903, 2388
Bsh1236I	CGCG	1 cut(s)	2229
BshFI	GGCC	9 cut(s)	185, 190, 645, 1405, 2421, 2566, 2808, 2974, 3023
BshNI	GGYRCC	1 cut(s)	49
BsiHKAI	GWGCWC	2 cut(s)	1574, 1888
BsiHKCI	CYCGRG	1 cut(s)	2679
BsiSI	CCGG	9 cut(s)	182, 254, 399, 496, 1037, 1406, 2975, 3044, 3073
BslFI	GGGAC	4 cut(s)	436, 916, 2468, 2540
BslI	CCNNNNNNNGG	5 cut(s)	158, 379, 1872, 2185, 2283
BsmAI	GTCTC	5 cut(s)	345, 1002, 2045, 2123, 2676
BsmBI	CGTCTC	1 cut(s)	345
BsmFI	GGGAC	4 cut(s)	436, 916, 2468, 2540
BsmI	GAATGC	3 cut(s)	520, 946, 2352
BsnI	GGCC	9 cut(s)	185, 190, 645, 1405, 2421, 2566, 2808, 2974, 3023
Bso31I	GGTCTC	1 cut(s)	2045
BsoBI	CYCGRG	1 cut(s)	2679
Bsp119I	TTCGAA	1 cut(s)	2722
Bsp120I	GGGCCC	1 cut(s)	2564
Bsp1286I	GDGCHC	3 cut(s)	1574, 1888, 2568
Bsp13I	TCCGGA	1 cut(s)	3043
Bsp1720I	GCTNAGC	1 cut(s)	823
Bsp19I	CCATGG	1 cut(s)	2568
BspANI	GGCC	9 cut(s)	185, 190, 645, 1405, 2421, 2566, 2808, 2974, 3023
BspCNI	CTCAG	9 cut(s)	735, 949, 1225, 1258, 1288, 1813, 2055, 2083, 2494
BspEI	TCCGGA	1 cut(s)	3043
BspFNI	CGCG	1 cut(s)	2229
BspLI	GGNNCC	9 cut(s)	51, 963, 1058, 1564, 1633, 2213, 2256, 2566, 3066
BspMAI	CTGCAG	4 cut(s)	685, 876, 2383, 2921
BspMI	ACCTGC	3 cut(s)	573, 1006, 2910
BspQI	GCTCTTC	1 cut(s)	600
BspT104I	TTCGAA	1 cut(s)	2722
BspT107I	GGYRCC	1 cut(s)	49
BspTNI	GGTCTC	1 cut(s)	2045
BsrDI	GCAATG	3 cut(s)	484, 866, 2985
BsrFI	RCCGGY	1 cut(s)	2974
BsrI	ACTGG	9 cut(s)	1060, 1367, 1579, 1635, 2011, 2247, 2415, 2598, 2778
BssAI	RCCGGY	1 cut(s)	2974
BssECI	CCNNGG	7 cut(s)	254, 483, 1120, 2184, 2485, 2568, 2803
BssNAI	GTATAC	2 cut(s)	1695, 2968
BssT1I	CCWWGG	4 cut(s)	483, 1120, 2184, 2568
Bst1107I	GTATAC	2 cut(s)	1695, 2968
Bst2UI	CCWGG	5 cut(s)	187, 1149, 2487, 2646, 2805
Bst6I	CTCTTC	3 cut(s)	600, 611, 2589
BstAPI	GCANNNNNTGC	1 cut(s)	2791
BstBAI	YACGTR	1 cut(s)	1452
BstBI	TTCGAA	1 cut(s)	2722
BstC8I	GCNNGC	7 cut(s)	362, 643, 740, 2716, 2783, 2872, 2976
BstDSI	CCRYGG	1 cut(s)	2568
BstFNI	CGCG	1 cut(s)	2229
BstH2I	RGCGCY	1 cut(s)	542
BstHHI	GCGC	2 cut(s)	541, 2851
BstMAI	GTCTC	5 cut(s)	345, 1002, 2045, 2123, 2676
BstMWI	GCNNNNNNNGC	7 cut(s)	536, 833, 842, 2724, 2791, 2980, 3002
BstNI	CCWGG	5 cut(s)	187, 1149, 2487, 2646, 2805
BstNSI	RCATGY	2 cut(s)	2718, 2789
BstPAI	GACNNNNGTC	1 cut(s)	908
BstSCI	CCNGG	8 cut(s)	185, 253, 398, 1147, 1405, 2485, 2644, 2803
BstSFI	CTRYAG	4 cut(s)	681, 872, 2379, 2917
BstSLI	GKGCMC	2 cut(s)	1574, 2568
BstUI	CGCG	1 cut(s)	2229
BstV1I	GCAGC	7 cut(s)	322, 571, 858, 1195, 1645, 2365, 2989
BstV2I	GAAGAC	1 cut(s)	1506
BstX2I	RGATCY	6 cut(s)	878, 1353, 1484, 1631, 2254, 2498
BstXI	CCANNNNNNTGG	1 cut(s)	3075
BstYI	RGATCY	6 cut(s)	878, 1353, 1484, 1631, 2254, 2498
BstZ17I	GTATAC	2 cut(s)	1695, 2968
BsuRI	GGCC	9 cut(s)	185, 190, 645, 1405, 2421, 2566, 2808, 2974, 3023
BtgI	CCRYGG	1 cut(s)	2568
BtsI	GCAGTG	2 cut(s)	1152, 2914
BtsIMutI	CAGTG	8 cut(s)	581, 904, 982, 1152, 1572, 1947, 2771, 2914
BveI	ACCTGC	3 cut(s)	573, 1006, 2910
Cac8I	GCNNGC	7 cut(s)	362, 643, 740, 2716, 2783, 2872, 2976
CaiI	CAGNNNCTG	3 cut(s)	1154, 1549, 2501
CfoI	GCGC	2 cut(s)	541, 2851
Cfr10I	RCCGGY	1 cut(s)	2974
Cfr13I	GGNCC	5 cut(s)	961, 2153, 2419, 2564, 2565
CseI	GACGC	2 cut(s)	327, 2384
Csp6I	GTAC	6 cut(s)	392, 840, 1086, 1579, 2367, 2601
CviQI	GTAC	6 cut(s)	392, 840, 1086, 1579, 2367, 2601
DraI	TTTAAA	6 cut(s)	106, 702, 1080, 1303, 2548, 3034
EaeI	YGGCCR	2 cut(s)	183, 643
Eam1104I	CTCTTC	3 cut(s)	600, 611, 2589
EarI	CTCTTC	3 cut(s)	600, 611, 2589
EciI	GGCGGA	1 cut(s)	729
Eco130I	CCWWGG	4 cut(s)	483, 1120, 2184, 2568
Eco24I	GRGCYC	1 cut(s)	2568
Eco31I	GGTCTC	1 cut(s)	2045
Eco32I	GATATC	2 cut(s)	1788, 2143
Eco47I	GGWCC	2 cut(s)	961, 2153
Eco47III	AGCGCT	1 cut(s)	540
Eco72I	CACGTG	1 cut(s)	1452
Eco88I	CYCGRG	1 cut(s)	2679
EcoO109I	RGGNCCY	1 cut(s)	961
EcoRI	GAATTC	4 cut(s)	11, 1126, 1225, 2465
EcoRII	CCWGG	5 cut(s)	185, 1147, 2485, 2644, 2803
EcoRV	GATATC	2 cut(s)	1788, 2143
EcoT14I	CCWWGG	4 cut(s)	483, 1120, 2184, 2568
EcoT22I	ATGCAT	3 cut(s)	522, 1796, 2716
EcoT38I	GRGCYC	1 cut(s)	2568
ErhI	CCWWGG	4 cut(s)	483, 1120, 2184, 2568
Esp3I	CGTCTC	1 cut(s)	345
FalI	AAGNNNNNCTT	2 cut(s)	2330, 2362
FaqI	GGGAC	4 cut(s)	436, 916, 2468, 2540
FauI	CCCGC	3 cut(s)	353, 1552, 2774
FauNDI	CATATG	2 cut(s)	1090, 2704
FbaI	TGATCA	1 cut(s)	778
FblI	GTMKAC	3 cut(s)	1694, 2373, 2967
Fnu4HI	GCNGC	9 cut(s)	336, 560, 872, 1184, 1659, 2379, 2595, 2728, 3003
FriOI	GRGCYC	1 cut(s)	2568
Fsp4HI	GCNGC	9 cut(s)	336, 560, 872, 1184, 1659, 2379, 2595, 2728, 3003
FspAI	RTGCGCAY	1 cut(s)	2850
FspBI	CTAG	9 cut(s)	132, 768, 932, 1121, 1263, 1439, 1860, 1889, 2264
FspI	TGCGCA	1 cut(s)	2850
GlaI	GCGC	2 cut(s)	540, 2850
GluI	GCNGC	9 cut(s)	336, 560, 872, 1184, 1659, 2379, 2595, 2728, 3003
HaeII	RGCGCY	1 cut(s)	542
HaeIII	GGCC	9 cut(s)	185, 190, 645, 1405, 2421, 2566, 2808, 2974, 3023
HapII	CCGG	9 cut(s)	182, 254, 399, 496, 1037, 1406, 2975, 3044, 3073
HgaI	GACGC	2 cut(s)	327, 2384
HhaI	GCGC	2 cut(s)	541, 2851
Hin6I	GCGC	2 cut(s)	539, 2849
HinP1I	GCGC	2 cut(s)	539, 2849
HincII	GTYRAC	4 cut(s)	572, 2374, 2521, 2577
HindII	GTYRAC	4 cut(s)	572, 2374, 2521, 2577
HpaII	CCGG	9 cut(s)	182, 254, 399, 496, 1037, 1406, 2975, 3044, 3073
HphI	GGTGA	6 cut(s)	128, 485, 1242, 1526, 1745, 2347
Hpy166II	GTNNAC	8 cut(s)	572, 1572, 1695, 2374, 2521, 2577, 2930, 2968
Hpy8I	GTNNAC	8 cut(s)	572, 1572, 1695, 2374, 2521, 2577, 2930, 2968
Hpy99I	CGWCG	2 cut(s)	205, 2378
HpyCH4IV	ACGT	3 cut(s)	1451, 2455, 2813
HpyF10VI	GCNNNNNNNGC	7 cut(s)	536, 833, 842, 2724, 2791, 2980, 3002
HpySE526I	ACGT	3 cut(s)	1451, 2455, 2813
HspAI	GCGC	2 cut(s)	539, 2849
Kpn2I	TCCGGA	1 cut(s)	3043
KroI	GCCGGC	1 cut(s)	2974
KroNI	GCCGGC	1 cut(s)	2976
Ksp22I	TGATCA	1 cut(s)	778
LguI	GCTCTTC	1 cut(s)	600
LmnI	GCTCC	4 cut(s)	819, 1562, 2217, 3064
Lsp1109I	GCAGC	7 cut(s)	322, 571, 858, 1195, 1645, 2365, 2989
MaeI	CTAG	9 cut(s)	132, 768, 932, 1121, 1263, 1439, 1860, 1889, 2264
MaeII	ACGT	3 cut(s)	1451, 2455, 2813
MaeIII	GTNAC	6 cut(s)	1030, 1248, 1280, 1875, 2002, 2958
MfeI	CAATTG	3 cut(s)	417, 1803, 2249
MflI	RGATCY	6 cut(s)	878, 1353, 1484, 1631, 2254, 2498
MhlI	GDGCHC	3 cut(s)	1574, 1888, 2568
MlsI	TGGCCA	1 cut(s)	645
MluNI	TGGCCA	1 cut(s)	645
MlyI	GAGTC	4 cut(s)	14, 1288, 2408, 2572
MmeI	TCCRAC	5 cut(s)	183, 243, 526, 1911, 3042
Mox20I	TGGCCA	1 cut(s)	645
Mph1103I	ATGCAT	3 cut(s)	522, 1796, 2716
MroI	TCCGGA	1 cut(s)	3043
MroNI	GCCGGC	1 cut(s)	2974
MroXI	GAANNNNTTC	1 cut(s)	751
MscI	TGGCCA	1 cut(s)	645
MslI	CAYNNNNRTG	1 cut(s)	3073
Msp20I	TGGCCA	1 cut(s)	645
MspA1I	CMGCKG	2 cut(s)	562, 2755
MspI	CCGG	9 cut(s)	182, 254, 399, 496, 1037, 1406, 2975, 3044, 3073
MspR9I	CCNGG	8 cut(s)	187, 255, 400, 1149, 1407, 2487, 2646, 2805
MssI	GTTTAAAC	1 cut(s)	2548
MunI	CAATTG	3 cut(s)	417, 1803, 2249
Mva1269I	GAATGC	3 cut(s)	520, 946, 2352
MvaI	CCWGG	5 cut(s)	187, 1149, 2487, 2646, 2805
MvnI	CGCG	1 cut(s)	2229
MwoI	GCNNNNNNNGC	7 cut(s)	536, 833, 842, 2724, 2791, 2980, 3002
NaeI	GCCGGC	1 cut(s)	2976
NciI	CCSGG	3 cut(s)	255, 400, 1407
NcoI	CCATGG	1 cut(s)	2568
NdeI	CATATG	2 cut(s)	1090, 2704
NgoMIV	GCCGGC	1 cut(s)	2974
NlaIV	GGNNCC	9 cut(s)	51, 963, 1058, 1564, 1633, 2213, 2256, 2566, 3066
NmuCI	GTSAC	3 cut(s)	1248, 1280, 2958
NsbI	TGCGCA	1 cut(s)	2850
NsiI	ATGCAT	3 cut(s)	522, 1796, 2716
NspI	RCATGY	2 cut(s)	2718, 2789
NspV	TTCGAA	1 cut(s)	2722
PaeI	GCATGC	1 cut(s)	2718
PaeR7I	CTCGAG	1 cut(s)	2679
PciSI	GCTCTTC	1 cut(s)	600
PctI	GAATGC	3 cut(s)	520, 946, 2352
PdiI	GCCGGC	1 cut(s)	2976
PdmI	GAANNNNTTC	1 cut(s)	751
PfeI	GAWTC	6 cut(s)	346, 1019, 1097, 1190, 2016, 2442
PflFI	GACNNNGTC	1 cut(s)	2244
PflMI	CCANNNNNTGG	2 cut(s)	158, 2185
PfoI	TCCNGGA	1 cut(s)	2644
PkrI	GCNGC	9 cut(s)	337, 561, 873, 1185, 1660, 2380, 2596, 2729, 3004
PleI	GAGTC	4 cut(s)	13, 1287, 2407, 2572
PmaCI	CACGTG	1 cut(s)	1452
PmeI	GTTTAAAC	1 cut(s)	2548
PmlI	CACGTG	1 cut(s)	1452
PpsI	GAGTC	4 cut(s)	13, 1287, 2407, 2572
Ppu21I	YACGTR	1 cut(s)	1452
PpuMI	RGGWCCY	1 cut(s)	961
PshAI	GACNNNNGTC	1 cut(s)	908
PsiI	TTATAA	1 cut(s)	1596
Psp5II	RGGWCCY	1 cut(s)	961
Psp6I	CCWGG	5 cut(s)	185, 1147, 2485, 2644, 2803
PspCI	CACGTG	1 cut(s)	1452
PspGI	CCWGG	5 cut(s)	185, 1147, 2485, 2644, 2803
PspN4I	GGNNCC	9 cut(s)	51, 963, 1058, 1564, 1633, 2213, 2256, 2566, 3066
PspOMI	GGGCCC	1 cut(s)	2564
PspPI	GGNCC	5 cut(s)	961, 2153, 2419, 2564, 2565
PspPPI	RGGWCCY	1 cut(s)	961
PstI	CTGCAG	4 cut(s)	685, 876, 2383, 2921
PstNI	CAGNNNCTG	3 cut(s)	1154, 1549, 2501
PsuI	RGATCY	6 cut(s)	878, 1353, 1484, 1631, 2254, 2498
PsyI	GACNNNGTC	1 cut(s)	2244
RsaI	GTAC	6 cut(s)	393, 841, 1087, 1580, 2368, 2602
RsaNI	GTAC	6 cut(s)	392, 840, 1086, 1579, 2367, 2601
RseI	CAYNNNNRTG	1 cut(s)	3073
SalI	GTCGAC	1 cut(s)	2372
SapI	GCTCTTC	1 cut(s)	600
SatI	GCNGC	9 cut(s)	336, 560, 872, 1184, 1659, 2379, 2595, 2728, 3003
Sau96I	GGNCC	5 cut(s)	961, 2153, 2419, 2564, 2565
ScaI	AGTACT	1 cut(s)	2602
SchI	GAGTC	4 cut(s)	14, 1288, 2408, 2572
ScrFI	CCNGG	8 cut(s)	187, 255, 400, 1149, 1407, 2487, 2646, 2805
SduI	GDGCHC	3 cut(s)	1574, 1888, 2568
SfcI	CTRYAG	4 cut(s)	681, 872, 2379, 2917
Sfr274I	CTCGAG	1 cut(s)	2679
SfuI	TTCGAA	1 cut(s)	2722
SinI	GGWCC	2 cut(s)	961, 2153
SlaI	CTCGAG	1 cut(s)	2679
SmiI	ATTTAAAT	1 cut(s)	1080
SmiMI	CAYNNNNRTG	1 cut(s)	3073
SmlI	CTYRAG	4 cut(s)	882, 1908, 2396, 2679
SmoI	CTYRAG	4 cut(s)	882, 1908, 2396, 2679
SphI	GCATGC	1 cut(s)	2718
SspMI	CTAG	9 cut(s)	132, 768, 932, 1121, 1263, 1439, 1860, 1889, 2264
StyD4I	CCNGG	8 cut(s)	185, 253, 398, 1147, 1405, 2485, 2644, 2803
StyI	CCWWGG	4 cut(s)	483, 1120, 2184, 2568
SwaI	ATTTAAAT	1 cut(s)	1080
TaiI	ACGT	3 cut(s)	1454, 2458, 2816
TaqI	TCGA	6 cut(s)	989, 1359, 1469, 2373, 2680, 2722
TaqII	GACCGA	1 cut(s)	1305
TatI	WGTACW	3 cut(s)	391, 1085, 2600
TauI	GCSGC	2 cut(s)	2597, 2730
TfiI	GAWTC	6 cut(s)	346, 1019, 1097, 1190, 2016, 2442
TscAI	CASTG	8 cut(s)	581, 904, 989, 1159, 1579, 1954, 2778, 2921
TseFI	GTSAC	3 cut(s)	1248, 1280, 2958
TseI	GCWGC	7 cut(s)	335, 559, 871, 1183, 1658, 2378, 3002
Tsp45I	GTSAC	3 cut(s)	1248, 1280, 2958
TspGWI	ACGGA	2 cut(s)	189, 304
TspRI	CASTG	8 cut(s)	581, 904, 989, 1159, 1579, 1954, 2778, 2921
Tth111I	GACNNNGTC	1 cut(s)	2244
Van91I	CCANNNNNTGG	2 cut(s)	158, 2185
VneI	GTGCAC	1 cut(s)	1570
VpaK11BI	GGWCC	2 cut(s)	961, 2153
XapI	RAATTY	8 cut(s)	11, 55, 142, 1126, 1225, 1832, 1979, 2465
XbaI	TCTAGA	4 cut(s)	931, 1438, 1888, 2263
XceI	RCATGY	2 cut(s)	2718, 2789
XhoI	CTCGAG	1 cut(s)	2679
XmaJI	CCTAGG	1 cut(s)	1120
XmiI	GTMKAC	3 cut(s)	1694, 2373, 2967
XmnI	GAANNNNTTC	1 cut(s)	751
XspI	CTAG	9 cut(s)	132, 768, 932, 1121, 1263, 1439, 1860, 1889, 2264
ZrmI	AGTACT	1 cut(s)	2602
Zsp2I	ATGCAT	3 cut(s)	522, 1796, 2716

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.