Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0001572

Physical Location & Seq

Genomic Coordinates Reverse (-)

58919520 .. 58928562

Gene Structure 9043 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG273300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2805 bp

ATGGAGGCTTTTGGAGGCAAGCCTCGGAATATGTATGGTCCGGTGGTGCCGGATTTGAAGGCGGTTGGGAAGAAGAGTTTGGAGTGGGATTTGAATGATTGGAAATGGGACGGCCATGTTTTTACTGCCACTCCTTTGAATTCTGTGCCCTCTGATTGTAGGAGTAGGCAGTTGTTTCCGACTGGGCCGGAAACTCCATCCAATGCTGGTTGGTCCAACAGTAGTTCTTCTGGTTCGGATGATATTAGTCCGGGGAATGAGAAAGGTAAAAGAGAATTGGAGAAAAGGAGAAGGGCTGCTGTTGTAGAAAATGAAGAAATAAATGATGAAGCTGGGTCTCTTAATCTCAAGCTTGGTGGGCAGGTTTACCCAATTTTGGAAGAAGATGGAAAGACCGGGAAGAAGACGAAGATTGTTGGGACTACTTCCAACCGCGCGGTTTGTCAGGTGGAGGACTGCAAGGCTGATCTTAGCCATGCCAAGGATTACCACCGACGGCATAAGGTCTGTGATATGCATTCCAAGGCAACCACAGCTATGGTGGGTAATAATTTGCAGCGGTTTTGTCAACAGTGTAGCAGGTTTCATGTTCTTCAAGAGTTTGATGAAGGGAAGAGAAGTTGTCGTAGACGTTTGGCTGGCCATAATAGGAGGAGAAGAAAAACACATCCTGACACTGTTGTTAATGGAGGCTCCATGAATGATGAAAGAGGAAGCAGTTATATATTGATTACTTTGCTAAGAATACTCTCCAATATGCACTCTAATAGTTCTGATCAAACAAAGGATCAGGATCTGCTTTCTCATCTGTTGAAGAACATAGCCAATAATATTGGCACTGTTGATGGAAGGAACATATCTGCATTGCTGCAGGGATCTCAAGGTTTACTTAATGGTGGGTCTTCCGTTCAGACTGCACAGAAGGTGCCAGATATTGGTTTCAATGGCAAGGAACCCAGTAGGCCTTCTGTTTCAACCTCTAAGATGGACGATTGTGTTAATCTTAATGGTCATTTAAGGCCTACAGGACAGTGTCCGACAGGACCTGCATCAGATAAGTTACTGAACAGAATATCTTCAGTTGGTGGTGATCTTGGAAGTCAAGCTCTTTCTGGTGTGCAGGCTACCAAGTCACTTTCCTCAAGAGACAGTCTTCCGTCCAAATCAGTTGCACCGGAATATGGGAGGATCCAGTTAAATGAGATCGATTTAAATAATACATATGACGATTCACAGGAGTGTTTAGAGAACCTAGGGAATTCTCATGTTCCTGTAAATCCAGGGACCGAGTCTCATGGAGGTCCCTTTTGGATACAGCGTGATTCTCAAAAGTCAAGCCCACCTCAGACAAGTGGGAATTCAGACTCAGCTGCTACTCGGTCACCATCAAGTTCTAGTGGAGAAGCTCAGAGTCGCACGGATCGGATTGTCTTCAAACTATTTGGAAAAGACCCGAGTGATCTTCCATTTGGTCTGCGATCACAGGTCCTCGGCTGGTTATCCAGCACTCCTACAGACATTGAAAGCTACATAAGGCCAGGCTGTATAATTTTGACAATTTACCTCCGTCTAGAAAAATCCACATGGGAGGAGCTTTGCTGTCATCTGGGATCCAGTTTGGCAAAACTTCTAGATGCTTCCAATGATCCTTTTTGGAGAACAGGATGGGTGTATACGAGGGTGCAACATTTTGTAGCATTTGTGTACAATGGTCAGGTTGTCTTAGACACACCCTTACCTCTTAGAAGCCACAAAACATGCAGGATCTCATGCATCAAACCAATTGCTGTCTCTTTATCTGAGAGAGCTGAATTTGTAGTGAAAGGTTTTAATCTTTCTAGTTCCACTACAAGGTTACTCTGTGCTCTAGAAGGGAAGTATTTGGCCCAAGAAACTTGTCATGATTTGATGGAAGCTACTGATACAACTAGTGAGCATGATGAGCTACAGTGCCTCAGATTCTCTTGTTCTATCCCAGATGCTACTGGCCGAGGATTCATTGAGGTTGAAGATCACGGTCTCAGTAGCAGCTTCTTTCCATTCATAGTTGCAGAGCAGGAAGTATGTTCAGAGATTTGCATGCTGGAGGATGCTATTGAGGCTGCCAATGACATGCAGAGAGATCCTGAAATGATGGAAGCCAAGAACCAAGCCATGGACTTCATACATGAATTGGGTTGGCTCCTTCATAAAAGTCAAGTCAAGTTGAGACTTGGTCACACAGATCCCAAACTAGATCTGTTTCCTTTTCAACGGTTTAGATTACTTATGGAGTTCTCCATGGAGCATGATTGGTGTGCTGTAGTGAATAAACTCTTAGGCATTCTGTATGAAGGTACTGTTGACGCTGGAGAGCATCTTTCCATTGAGCTTGCATTATTGGATATGGGCCTCCTCCACAGAGCTGTGCAAAGAAATTGCAAGCCTATGGTGGAATTCTTGTTAAGATTTGTCCCAGATAAAGGTTTAGATAAAGCAGAGTTGGAGGAGAAGCAACAAGTTGACAGGAACAGCAACAGGTTCTTATTTAGACCTGATGTTGTCGGTCCCATGGGGTTGACTCCTCTTCATGTTGCAGCTAGTACAGATGGCTGTGAGTATGTTTTGGATGCCTTAACTAATGATCCTGGAAAGGTAATTTCTTCTTATACATTGCTACATATTGATTATTTATATGTAGAAATCACAATGAGCTATTATCCAAAAACATTAAAACTGAAACCACTGCAGCCTTCCGGTCTAGAAAAATGGAAGAGAAAGTACCAAACTGAAGCCCACAATTTTAATTTGTATCTTGTTAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SBP

Protein Analysis

934

Amino Acids

103.87

Weight (kDa)

6.3

Isoelectric Point (pI)

48.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SBP	PF03110	148 - 221	7.2e-30	SBP domain
Ig_SPL7	PF26102	583 - 694	1.2e-45	SPL7-like, immunoglobulin-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001572)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47070 AT2G47070 AT3G60030
fragaria_vesca	FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420
malus_domestica	MD13G1141300.v1.1 MD13G1141400.v1.1 MD16G1137600.v1.1 MD16G1137700.v1.1
prunus_persica	Prupe.1G106500_v2.0.a1 Prupe.1G106500_v2.0.a1 Prupe.1G106600_v2.0.a1
pyrus_communis	pycom13g12280 pycom13g12290 pycom16g12140 pycom16g12150 pycom16g12160
rosa_chinensis	RchiOBHm_Chr4g0427341 RchiOBHm_Chr4g0427351
rosa_laevigata	RLG00000007250 RLG00000007251
rosa_multiflora	Rmu_sc0003813.1_g000017 Rmu_sc0003813.1_g000018
rosa_roxburghii	Rroxscaffold_5G00369020 Rroxscaffold_5G00369030
rosa_rugosa	Rorug04G0216800
rosa_samantha	Rh4AG273100 Rh4AG273300 Rh4BG278800 Rh4BG278900 Rh4CG294100 Rh4CG294200 Rh4DG276200 Rh4DG276300
rosa_wichuraiana	Rw4G023700 Rw4G023710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	3 cut(s)	352, 570, 1054
AccB1I	GGYRCC	2 cut(s)	46, 925
AccB7I	CCANNNNNTGG	2 cut(s)	935, 2155
AccI	GTMKAC	2 cut(s)	628, 1673
AccII	CGCG	2 cut(s)	435, 437
AciI	CCGC	4 cut(s)	62, 433, 437, 559
AcoI	YGGCCR	3 cut(s)	112, 640, 1987
AcsI	RAATTY	5 cut(s)	139, 1258, 1357, 1811, 2435
AcuI	CTGAAG	2 cut(s)	1062, 2790
AfaI	GTAC	4 cut(s)	1706, 2338, 2584, 2762
AfiI	CCNNNNNNNGG	7 cut(s)	376, 481, 935, 1181, 1851, 2155, 2462
AhlI	ACTAGT	1 cut(s)	1928
AjnI	CCWGG	3 cut(s)	1279, 1537, 2626
AjuI	GAANNNNNNNTTGG	2 cut(s)	62, 94
AleI	CACNNNNGTG	1 cut(s)	1237
Alw21I	GWGCWC	1 cut(s)	1867
Alw26I	GTCTC	6 cut(s)	342, 1140, 1296, 1795, 2024, 2203
AlwNI	CAGNNNCTG	2 cut(s)	796, 1046
Ama87I	CYCGRG	1 cut(s)	1453
AoxI	GGCC	9 cut(s)	112, 185, 640, 962, 1019, 1535, 1884, 1987, 2389
ApeKI	GCWGC	8 cut(s)	296, 556, 868, 1370, 2028, 2102, 2576, 2728
ApoI	RAATTY	5 cut(s)	139, 1258, 1357, 1811, 2435
Asp700I	GAANNNNTTC	1 cut(s)	1075
AspA2I	CCTAGG	1 cut(s)	1252
AspLEI	GCGC	1 cut(s)	437
AsuC2I	CCSGG	2 cut(s)	252, 397
AsuHPI	GGTGA	2 cut(s)	1100, 1374
AvaI	CYCGRG	1 cut(s)	1453
AvaII	GGWCC	7 cut(s)	38, 213, 1043, 1284, 1301, 1486, 2546
AvrII	CCTAGG	1 cut(s)	1252
BaeGI	GKGCMC	1 cut(s)	150
BalI	TGGCCA	1 cut(s)	642
BamHI	GGATCC	2 cut(s)	1188, 1610
BanI	GGYRCC	2 cut(s)	46, 925
BarI	GAAGNNNNNNTAC	2 cut(s)	2744, 2776
BbsI	GAAGAC	4 cut(s)	410, 894, 1145, 1423
Bbv12I	GWGCWC	1 cut(s)	1867
BbvI	GCAGC	8 cut(s)	283, 568, 855, 1357, 2040, 2089, 2588, 2740
BccI	CCATC	9 cut(s)	205, 380, 839, 979, 1393, 1659, 1903, 2128, 2582
BceAI	ACGGC	2 cut(s)	127, 512
BciT130I	CCWGG	3 cut(s)	1281, 1539, 2628
BciVI	GTATCC	1 cut(s)	1305
BclI	TGATCA	1 cut(s)	775
BcnI	CCSGG	2 cut(s)	252, 397
BcoDI	GTCTC	6 cut(s)	342, 1140, 1296, 1795, 2024, 2203
BcuI	ACTAGT	1 cut(s)	1928
BfmI	CTRYAG	6 cut(s)	869, 1023, 1512, 1946, 2301, 2726
BfuAI	ACCTGC	3 cut(s)	352, 570, 1054
BfuI	GTATCC	1 cut(s)	1305
BglII	AGATCT	1 cut(s)	2236
BisI	GCNGC	8 cut(s)	297, 557, 869, 1371, 2029, 2103, 2577, 2729
BlnI	CCTAGG	1 cut(s)	1252
BlsI	GCNGC	8 cut(s)	298, 558, 870, 1372, 2030, 2104, 2578, 2730
Bme1390I	CCNGG	5 cut(s)	252, 397, 1281, 1539, 2628
Bme18I	GGWCC	7 cut(s)	38, 213, 1043, 1284, 1301, 1486, 2546
BmeT110I	CYCGRG	1 cut(s)	1453
BmrFI	CCNGG	5 cut(s)	252, 397, 1281, 1539, 2628
BmrI	ACTGGG	2 cut(s)	192, 951
BmsI	GCATC	7 cut(s)	1058, 1624, 1782, 1969, 2080, 2365, 2599
BmuI	ACTGGG	2 cut(s)	192, 951
BpiI	GAAGAC	4 cut(s)	410, 894, 1145, 1423
BpmI	CTGGAG	2 cut(s)	2105, 2370
BpuEI	CTTGAG	3 cut(s)	332, 864, 1126
BpuMI	CCSGG	2 cut(s)	252, 397
Bsa29I	ATCGAT	1 cut(s)	1206
BsaBI	GATNNNNATC	1 cut(s)	792
BsaI	GGTCTC	2 cut(s)	342, 2024
BsaWI	WCCGGW	3 cut(s)	40, 1174, 2735
BsaXI	ACNNNNNCTCC	2 cut(s)	115, 145
Bsc4I	CCNNNNNNNGG	7 cut(s)	376, 481, 935, 1181, 1851, 2155, 2462
Bse1I	ACTGG	5 cut(s)	187, 957, 1192, 1614, 1990
Bse3DI	GCAATG	2 cut(s)	863, 2651
Bse8I	GATNNNNATC	1 cut(s)	792
BseBI	CCWGG	3 cut(s)	1281, 1539, 2628
BseCI	ATCGAT	1 cut(s)	1206
BseGI	GGATG	6 cut(s)	197, 244, 667, 1670, 2095, 2614
BseJI	GATNNNNATC	1 cut(s)	792
BseLI	CCNNNNNNNGG	7 cut(s)	376, 481, 935, 1181, 1851, 2155, 2462
BseMI	GCAATG	2 cut(s)	863, 2651
BseMII	CTCAG	6 cut(s)	1358, 1380, 1421, 1791, 1969, 2035
BseNI	ACTGG	5 cut(s)	187, 957, 1192, 1614, 1990
BseRI	GAGGAG	5 cut(s)	667, 1604, 2384, 2501, 2553
BseSI	GKGCMC	1 cut(s)	150
BseXI	GCAGC	8 cut(s)	283, 568, 855, 1357, 2040, 2089, 2588, 2740
BseYI	CCCAGC	1 cut(s)	332
BsgI	GTGCAG	2 cut(s)	900, 1139
Bsh1236I	CGCG	2 cut(s)	435, 437
BshFI	GGCC	9 cut(s)	114, 187, 642, 964, 1021, 1537, 1886, 1989, 2391
BshNI	GGYRCC	2 cut(s)	46, 925
BshVI	ATCGAT	1 cut(s)	1206
BsiHKAI	GWGCWC	1 cut(s)	1867
BsiHKCI	CYCGRG	1 cut(s)	1453
BsiSI	CCGG	7 cut(s)	41, 50, 188, 251, 396, 1175, 2736
BslFI	GGGAC	6 cut(s)	122, 433, 1287, 1297, 2438, 2532
BslI	CCNNNNNNNGG	7 cut(s)	376, 481, 935, 1181, 1851, 2155, 2462
BsmAI	GTCTC	6 cut(s)	342, 1140, 1296, 1795, 2024, 2203
BsmFI	GGGAC	6 cut(s)	122, 433, 1287, 1297, 2438, 2532
BsmI	GAATGC	2 cut(s)	517, 2322
BsnI	GGCC	9 cut(s)	114, 187, 642, 964, 1021, 1537, 1886, 1989, 2391
Bso31I	GGTCTC	2 cut(s)	342, 2024
BsoBI	CYCGRG	1 cut(s)	1453
Bsp1286I	GDGCHC	2 cut(s)	150, 1867
Bsp1407I	TGTACA	1 cut(s)	1704
Bsp19I	CCATGG	3 cut(s)	2154, 2280, 2550
BspACI	CCGC	4 cut(s)	62, 433, 437, 559
BspANI	GGCC	9 cut(s)	114, 187, 642, 964, 1021, 1537, 1886, 1989, 2391
BspCNI	CTCAG	6 cut(s)	1357, 1379, 1420, 1792, 1968, 2034
BspDI	ATCGAT	1 cut(s)	1206
BspFNI	CGCG	2 cut(s)	435, 437
BspHI	TCATGA	1 cut(s)	1900
BspMAI	CTGCAG	2 cut(s)	873, 2730
BspMI	ACCTGC	3 cut(s)	352, 570, 1054
BspT107I	GGYRCC	2 cut(s)	46, 925
BspTNI	GGTCTC	2 cut(s)	342, 2024
BsrDI	GCAATG	2 cut(s)	863, 2651
BsrGI	TGTACA	1 cut(s)	1704
BsrI	ACTGG	5 cut(s)	187, 957, 1192, 1614, 1990
BssNAI	GTATAC	1 cut(s)	1674
BssT1I	CCWWGG	6 cut(s)	480, 522, 1252, 2154, 2280, 2550
Bst1107I	GTATAC	1 cut(s)	1674
Bst2UI	CCWGG	3 cut(s)	1281, 1539, 2628
Bst6I	CTCTTC	4 cut(s)	68, 608, 2571, 2747
BstAUI	TGTACA	1 cut(s)	1704
BstC8I	GCNNGC	6 cut(s)	20, 640, 1122, 2081, 2373, 2423
BstDSI	CCRYGG	3 cut(s)	2154, 2280, 2550
BstEII	GGTNACC	1 cut(s)	1380
BstF5I	GGATG	6 cut(s)	197, 244, 667, 1670, 2095, 2614
BstFNI	CGCG	2 cut(s)	435, 437
BstHHI	GCGC	1 cut(s)	437
BstMAI	GTCTC	6 cut(s)	342, 1140, 1296, 1795, 2024, 2203
BstMWI	GCNNNNNNNGC	4 cut(s)	358, 533, 1942, 2099
BstNI	CCWGG	3 cut(s)	1281, 1539, 2628
BstNSI	RCATGY	3 cut(s)	1761, 2083, 2116
BstPI	GGTNACC	1 cut(s)	1380
BstSCI	CCNGG	5 cut(s)	250, 395, 1279, 1537, 2626
BstSFI	CTRYAG	6 cut(s)	869, 1023, 1512, 1946, 2301, 2726
BstSLI	GKGCMC	1 cut(s)	150
BstUI	CGCG	2 cut(s)	435, 437
BstV1I	GCAGC	8 cut(s)	283, 568, 855, 1357, 2040, 2089, 2588, 2740
BstV2I	GAAGAC	4 cut(s)	410, 894, 1145, 1423
BstX2I	RGATCY	8 cut(s)	793, 875, 1188, 1610, 1764, 2122, 2224, 2236
BstXI	CCANNNNNNTGG	1 cut(s)	538
BstYI	RGATCY	8 cut(s)	793, 875, 1188, 1610, 1764, 2122, 2224, 2236
BstZ17I	GTATAC	1 cut(s)	1674
Bsu15I	ATCGAT	1 cut(s)	1206
BsuI	GTATCC	1 cut(s)	1305
BsuRI	GGCC	9 cut(s)	114, 187, 642, 964, 1021, 1537, 1886, 1989, 2391
BsuTUI	ATCGAT	1 cut(s)	1206
BtgI	CCRYGG	3 cut(s)	2154, 2280, 2550
BtsCI	GGATG	6 cut(s)	197, 244, 667, 1670, 2095, 2614
BtsI	GCAGTG	1 cut(s)	2723
BtsIMutI	CAGTG	6 cut(s)	578, 675, 837, 1037, 1955, 2723
BveI	ACCTGC	3 cut(s)	352, 570, 1054
Cac8I	GCNNGC	6 cut(s)	20, 640, 1122, 2081, 2373, 2423
CaiI	CAGNNNCTG	2 cut(s)	796, 1046
CciI	TCATGA	1 cut(s)	1900
CfoI	GCGC	1 cut(s)	437
ClaI	ATCGAT	1 cut(s)	1206
CseI	GACGC	1 cut(s)	2354
Csp6I	GTAC	4 cut(s)	1705, 2337, 2583, 2761
CspCI	CAANNNNNGTGG	2 cut(s)	337, 372
CviQI	GTAC	4 cut(s)	1705, 2337, 2583, 2761
DraI	TTTAAA	1 cut(s)	1212
EaeI	YGGCCR	3 cut(s)	112, 640, 1987
Eam1104I	CTCTTC	4 cut(s)	68, 608, 2571, 2747
EarI	CTCTTC	4 cut(s)	68, 608, 2571, 2747
Eco130I	CCWWGG	6 cut(s)	480, 522, 1252, 2154, 2280, 2550
Eco147I	AGGCCT	2 cut(s)	964, 1021
Eco31I	GGTCTC	2 cut(s)	342, 2024
Eco47I	GGWCC	7 cut(s)	38, 213, 1043, 1284, 1301, 1486, 2546
Eco57I	CTGAAG	2 cut(s)	1062, 2790
Eco88I	CYCGRG	1 cut(s)	1453
Eco91I	GGTNACC	1 cut(s)	1380
EcoO109I	RGGNCCY	3 cut(s)	1043, 1301, 1486
EcoO65I	GGTNACC	1 cut(s)	1380
EcoRI	GAATTC	4 cut(s)	139, 1258, 1357, 2435
EcoRII	CCWGG	3 cut(s)	1279, 1537, 2626
EcoT14I	CCWWGG	6 cut(s)	480, 522, 1252, 2154, 2280, 2550
EcoT22I	ATGCAT	2 cut(s)	519, 1775
ErhI	CCWWGG	6 cut(s)	480, 522, 1252, 2154, 2280, 2550
FalI	AAGNNNNNCTT	2 cut(s)	873, 905
FaqI	GGGAC	6 cut(s)	122, 433, 1287, 1297, 2438, 2532
FauNDI	CATATG	1 cut(s)	1222
FbaI	TGATCA	1 cut(s)	775
FblI	GTMKAC	2 cut(s)	628, 1673
Fnu4HI	GCNGC	8 cut(s)	297, 557, 869, 1371, 2029, 2103, 2577, 2729
FokI	GGATG	6 cut(s)	184, 251, 654, 1677, 2102, 2621
Fsp4HI	GCNGC	8 cut(s)	297, 557, 869, 1371, 2029, 2103, 2577, 2729
GlaI	GCGC	1 cut(s)	436
GluI	GCNGC	8 cut(s)	297, 557, 869, 1371, 2029, 2103, 2577, 2729
GsaI	CCCAGC	1 cut(s)	336
GsuI	CTGGAG	2 cut(s)	2105, 2370
HaeIII	GGCC	9 cut(s)	114, 187, 642, 964, 1021, 1537, 1886, 1989, 2391
HapII	CCGG	7 cut(s)	41, 50, 188, 251, 396, 1175, 2736
HgaI	GACGC	1 cut(s)	2354
HhaI	GCGC	1 cut(s)	437
Hin6I	GCGC	1 cut(s)	435
HinP1I	GCGC	1 cut(s)	435
HincII	GTYRAC	4 cut(s)	569, 2344, 2503, 2559
HindII	GTYRAC	4 cut(s)	569, 2344, 2503, 2559
HindIII	AAGCTT	1 cut(s)	350
HinfI	GANTC	8 cut(s)	1229, 1289, 1322, 1364, 1411, 1959, 1995, 2560
HpaII	CCGG	7 cut(s)	41, 50, 188, 251, 396, 1175, 2736
HphI	GGTGA	2 cut(s)	1100, 1374
Hpy166II	GTNNAC	9 cut(s)	367, 569, 629, 887, 1674, 1705, 2344, 2503, 2559
Hpy8I	GTNNAC	9 cut(s)	367, 569, 629, 887, 1674, 1705, 2344, 2503, 2559
Hpy99I	CGWCG	1 cut(s)	498
HpyCH4IV	ACGT	1 cut(s)	631
HpyF10VI	GCNNNNNNNGC	4 cut(s)	358, 533, 1942, 2099
HpySE526I	ACGT	1 cut(s)	631
HspAI	GCGC	1 cut(s)	435
Ksp22I	TGATCA	1 cut(s)	775
LmnI	GCTCC	4 cut(s)	698, 1591, 2187, 2284
Lsp1109I	GCAGC	8 cut(s)	283, 568, 855, 1357, 2040, 2089, 2588, 2740
LweI	GCATC	7 cut(s)	1058, 1624, 1782, 1969, 2080, 2365, 2599
MaeII	ACGT	1 cut(s)	631
MaeIII	GTNAC	5 cut(s)	1059, 1131, 1380, 1854, 2216
MfeI	CAATTG	1 cut(s)	1782
MflI	RGATCY	8 cut(s)	793, 875, 1188, 1610, 1764, 2122, 2224, 2236
MhlI	GDGCHC	2 cut(s)	150, 1867
MlsI	TGGCCA	1 cut(s)	642
MluNI	TGGCCA	1 cut(s)	642
MlyI	GAGTC	4 cut(s)	1298, 1358, 1420, 2554
MmeI	TCCRAC	5 cut(s)	203, 240, 453, 1061, 2463
Mox20I	TGGCCA	1 cut(s)	642
Mph1103I	ATGCAT	2 cut(s)	519, 1775
MroXI	GAANNNNTTC	1 cut(s)	1075
MscI	TGGCCA	1 cut(s)	642
MslI	CAYNNNNRTG	2 cut(s)	536, 1237
Msp20I	TGGCCA	1 cut(s)	642
MspA1I	CMGCKG	2 cut(s)	559, 1370
MspI	CCGG	7 cut(s)	41, 50, 188, 251, 396, 1175, 2736
MspR9I	CCNGG	5 cut(s)	252, 397, 1281, 1539, 2628
MunI	CAATTG	1 cut(s)	1782
Mva1269I	GAATGC	2 cut(s)	517, 2322
MvaI	CCWGG	3 cut(s)	1281, 1539, 2628
MvnI	CGCG	2 cut(s)	435, 437
MwoI	GCNNNNNNNGC	4 cut(s)	358, 533, 1942, 2099
NciI	CCSGG	2 cut(s)	252, 397
NcoI	CCATGG	3 cut(s)	2154, 2280, 2550
NdeI	CATATG	1 cut(s)	1222
NmeAIII	GCCGAG	2 cut(s)	1470, 2015
NmuCI	GTSAC	3 cut(s)	1131, 1380, 2216
NsiI	ATGCAT	2 cut(s)	519, 1775
NspI	RCATGY	3 cut(s)	1761, 2083, 2116
OliI	CACNNNNGTG	1 cut(s)	1237
PaeI	GCATGC	1 cut(s)	2083
PagI	TCATGA	1 cut(s)	1900
PceI	AGGCCT	2 cut(s)	964, 1021
PctI	GAATGC	2 cut(s)	517, 2322
PdmI	GAANNNNTTC	1 cut(s)	1075
PfeI	GAWTC	4 cut(s)	1229, 1322, 1959, 1995
PflFI	GACNNNGTC	3 cut(s)	1032, 1288, 2214
PflMI	CCANNNNNTGG	2 cut(s)	935, 2155
PfoI	TCCNGGA	1 cut(s)	2626
PkrI	GCNGC	8 cut(s)	298, 558, 870, 1372, 2030, 2104, 2578, 2730
PleI	GAGTC	4 cut(s)	1297, 1358, 1419, 2554
PpsI	GAGTC	4 cut(s)	1297, 1358, 1419, 2554
PpuMI	RGGWCCY	3 cut(s)	1043, 1301, 1486
Psp5II	RGGWCCY	3 cut(s)	1043, 1301, 1486
Psp6I	CCWGG	3 cut(s)	1279, 1537, 2626
PspEI	GGTNACC	1 cut(s)	1380
PspFI	CCCAGC	1 cut(s)	332
PspGI	CCWGG	3 cut(s)	1279, 1537, 2626
PspPPI	RGGWCCY	3 cut(s)	1043, 1301, 1486
PstI	CTGCAG	2 cut(s)	873, 2730
PstNI	CAGNNNCTG	2 cut(s)	796, 1046
PsuI	RGATCY	8 cut(s)	793, 875, 1188, 1610, 1764, 2122, 2224, 2236
PsyI	GACNNNGTC	3 cut(s)	1032, 1288, 2214
PvuII	CAGCTG	1 cut(s)	1370
RsaI	GTAC	4 cut(s)	1706, 2338, 2584, 2762
RsaNI	GTAC	4 cut(s)	1705, 2337, 2583, 2761
RseI	CAYNNNNRTG	2 cut(s)	536, 1237
SatI	GCNGC	8 cut(s)	297, 557, 869, 1371, 2029, 2103, 2577, 2729
SchI	GAGTC	4 cut(s)	1298, 1358, 1420, 2554
ScrFI	CCNGG	5 cut(s)	252, 397, 1281, 1539, 2628
SduI	GDGCHC	2 cut(s)	150, 1867
SfaNI	GCATC	7 cut(s)	1058, 1624, 1782, 1969, 2080, 2365, 2599
SfcI	CTRYAG	6 cut(s)	869, 1023, 1512, 1946, 2301, 2726
SinI	GGWCC	7 cut(s)	38, 213, 1043, 1284, 1301, 1486, 2546
SmiI	ATTTAAAT	1 cut(s)	1212
SmiMI	CAYNNNNRTG	2 cut(s)	536, 1237
SmlI	CTYRAG	3 cut(s)	347, 879, 1141
SmoI	CTYRAG	3 cut(s)	347, 879, 1141
SpeI	ACTAGT	1 cut(s)	1928
SphI	GCATGC	1 cut(s)	2083
SseBI	AGGCCT	2 cut(s)	964, 1021
SsiI	CCGC	4 cut(s)	62, 433, 437, 559
SspI	AATATT	1 cut(s)	832
StuI	AGGCCT	2 cut(s)	964, 1021
StyD4I	CCNGG	5 cut(s)	250, 395, 1279, 1537, 2626
StyI	CCWWGG	6 cut(s)	480, 522, 1252, 2154, 2280, 2550
SwaI	ATTTAAAT	1 cut(s)	1212
TaiI	ACGT	1 cut(s)	634
TaqI	TCGA	1 cut(s)	1206
TaqII	GACCGA	3 cut(s)	1301, 1368, 2534
TatI	WGTACW	2 cut(s)	1704, 2582
TfiI	GAWTC	4 cut(s)	1229, 1322, 1959, 1995
TscAI	CASTG	6 cut(s)	578, 682, 844, 1037, 1955, 2730
TseFI	GTSAC	3 cut(s)	1131, 1380, 2216
TseI	GCWGC	8 cut(s)	296, 556, 868, 1370, 2028, 2102, 2576, 2728
Tsp45I	GTSAC	3 cut(s)	1131, 1380, 2216
TspGWI	ACGGA	4 cut(s)	895, 1146, 1433, 1556
TspRI	CASTG	6 cut(s)	578, 682, 844, 1037, 1955, 2730
Tth111I	GACNNNGTC	3 cut(s)	1032, 1288, 2214
Van91I	CCANNNNNTGG	2 cut(s)	935, 2155
VpaK11BI	GGWCC	7 cut(s)	38, 213, 1043, 1284, 1301, 1486, 2546
XapI	RAATTY	5 cut(s)	139, 1258, 1357, 1811, 2435
XbaI	TCTAGA	4 cut(s)	1570, 1630, 1867, 2740
XceI	RCATGY	3 cut(s)	1761, 2083, 2116
XcmI	CCANNNNNNNNNTGG	1 cut(s)	538
XmaJI	CCTAGG	1 cut(s)	1252
XmiI	GTMKAC	2 cut(s)	628, 1673
XmnI	GAANNNNTTC	1 cut(s)	1075
Zsp2I	ATGCAT	2 cut(s)	519, 1775

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.