Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0001572

Physical Location & Seq

Genomic Coordinates Forward (+)

8507013 .. 8512261

Gene Structure 5249 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g12280.7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3090 bp

ATGGAGGCTTTTGGAGGCAGAGCTCGGAATTTCTATGTTCCGATGGTGCCGGATTTGAAGGGGGCTGGGAAAAAGAGTTTGGAATGGGATTTGAATGATTGGAAATGGGATGGAGATCTTTTTACTGCTAGTCCTTTGAATGCTGTACAATCTGATTGTAGGAGCAGGCAGTTGTTTCCTCTTGGGCTGCCGGAAACTCCCTCCACTGCTGGTTTGTCCAACAGTTCTTCTTCTGGTTCGGATGGTATCTGTCCTGGGAATGAGAAAGGTAAAAGAGAGCTGGAGAAAAGAAGAAGGGCTAGTTTTGTAGAAAATGAAGGGCTAAATGATGAAGTTGGGTCTCTTAATCTCAAGCTTGGTGGGCAAGCTTACCCAATCATGGAAGGAGAGGTACAAAATGGGAAGAAGACGAAGATAGTTGGGACTACTTTAAACCGAGCAGTTTGTCAGGTGGAGGACTGTAAGGCTGATCTTAGCAATGCCAAGGATTACCACCGACGACATAAGGTCTGTGATATGCATTCTAAGGCAACTAAAGCGGTGGTGGCAAATGTTTTGCAGCGGTTCTGTCAGCAGTGTAGCAGGTTTCATGTCCTTCAAGAGTTTGATGAAGGAAAGAGAAGTTGTCGTAGACGTTTGGCAGGCCACAATAGGAGGAGAAGAAAAACACATCCTGATACCGTAGTTAATGGAGGCTCATTGAATGATGAAAGAGGAAGCAGTTATCTATTGATAAGTTTGCTGAGAATACTCTCCAACATGCACTCTAATAGTTCAGATCAAACGATCGATCAGGATTTGCTATCTCATCTTTTGAAGAATCTAGCCAATCTTTCTGGTACAGTTGATGGAAGAAACATGTCTGCATTGCTTACGGCATCTCAAGGTTTACTAAATGGTGGGGCATCAATTCAGACTGCACAAAAGGTCCCAGATACAGTTTCCAACGGCTGTGAACCAAGTAAGCCTTCTGTTTCAGCCTCTAAAATGGATGACTATGTTAATTGTGAGGACCCTTCAAGACCTATACAACAGTGTTCTACAGTACCTGCATCAGATTTCAGGAGAATATCTTCAGTTGATGCAGATCATGGAGGTCTACAAGTTGTTTCAGGTCTAAATGCCACCAAGCCATTTCCCTCAAGAGCCAGTGTTCCATCCACATCAGTTGCACCAGAAACTACAACGGGGAGGATGCAGTTAACTGGCATTGATTTAAATAATACATATGACGATTCCCAGGACCATTTGGACAACCTAGGGAATTCTCATGCCCCTGTAAATTCAGGGACAGTGGCTCATGGTTTTCCCTTATGGATGCGGCAGGATTCGCAAAAGTCTAGCCCACCTCAGACAAGTGGGACTTCATGCTCAACTTCATCAAGTTCTAGTGGAGATGCTCAGAGTCGCACGGACCGTATTGTTTTTAAACTCTTTGGAAAAGATCCAAATGATCTTCCATTTGTTCTACGAGCACAGATTCTCGACTGGTTGTCCCACAGTCCTACAGACATTGAAAGCTACATAAGGCCAGGATGTATCATTTTGACAGTTTACCTCCGTCTAGAAAAATCCACGTGGGAGGAGCTCTGCTGTAATCTGGGATCCATTATGAAACAACTTTTACATGCTGCCAACGATCCTTTTTGGACAACAGGATGGGTGTATACTAGGGTACAACATTCTGTAGCATTTACGTACAATGGTCAGGTTGTCTTAGACACACCCTTACCTCTGAAAAGCCATAAAAATTGCAGGATATCATGCATCAAACCAATTGCAGTTTCTTTATCCGAAAGAGCTGAATTTGTAGTAAAGGGGTTTAATCTTTCTCGTGCCACCACAAGGCTGCTCTGTGCTCTGGAAGGGAAGTATCTAGTCCAAGAAACTTGTTATGACTTGATGGATGGTGCTGATACAACTGTTGCAAATGATCAGCTACAGTGCCTCAGATTCTCCTGCTCTATACCCAATGTTACTGGCCGAGGACTCATTGAGGTTGAAGACCATGGTCTCAGCGGCTGCTTCTTTCCATTTATAGTTGCCGAGCAGGAAGTATGTTCAGAGATTTGTACCCTGGAGGGTGCGATTGAGGTGGCTGAGACTGCAGATAATATCCAGACAGAACCTGAAAAGTTGGAAGCCAAGAACCAAGCGTTGGACTTTGTACATGAATTGGGTTGGCTCCTTCACAGATGTCACACTAAATTTAGACTTGGTCACAGGGATCCCAACCTAGAACTATTTTCTTTTAGACGGTTCAGGTTGCTTATGGAGTTTTCCATGGACCGTGATTGGTGTGCTGTAGTGAAGAAACTCCTGGGCATTCTGCTTGAGGGTACTGTTGACGCTGGAGAACATCCTTCTATTGAGCTTGCGTTATTGGATATGAGCCTCCTCCACGGAGCCGTGCGAAGAAAGTGCAGGCCTATGGTGGAACTCTTGTTAAGATTTGTCCTAGACAAAGGGTTAGATAAAACGGGATCTGAGCACAGGCAACAAGTTGACGGGGACGGCAGCAACTTCTTATTTAAACCCGATGCAGTTGGGCCCATGGGATTGACTCCTCTTCATGTTGCAGCCAGTACTGATGGATGTGAGAATATATTGGATGCCTTAACTGATGATCCTGGAAAGGTGGGAATTGAAGCGTGGAAAAATGCTCGAGACAGTACAGGATTGACACCTAATGATTATGCATGCCTGCGAGGCTGCTACACCTATGTCCAAATTGTCCAGCGGAAAATCAACAAGAAACATGAAAGCGGGCACGTGGTGCTTGATATCCCTGGCGTTATCTTAGACAGCAGCAGCAAGCAGAAACAATTAGATGGGCATAAGTCCTCAAAAGTCTCCAGATTGGAGACCGAAAGGATCGATATGAAAGCAATGCAGGCACATTGCAAGCTATGTGAAATGAAACTAGCATATGGAAACACAAGGTCGCTTGTGTACAGGCCGGCAATGCTGTCAATGGTAACCATTGCTGCTGTCTGTGTTTGCGTGGCCTTGCTCTTCAAAAGCTCGCCTGAAGTCGTTTACGTCTTCCAGCCCTTCAGGTGGGAACTCTTGAAGTATGGACCGAGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SBP

Protein Analysis

1030

Amino Acids

113.6

Weight (kDa)

6.98

Isoelectric Point (pI)

43.4

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001572)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47070 AT2G47070 AT3G60030
fragaria_vesca	FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420
malus_domestica	MD13G1141300.v1.1 MD13G1141400.v1.1 MD16G1137600.v1.1 MD16G1137700.v1.1
prunus_persica	Prupe.1G106500_v2.0.a1 Prupe.1G106500_v2.0.a1 Prupe.1G106600_v2.0.a1
pyrus_communis	pycom13g12280 pycom13g12290 pycom16g12140 pycom16g12150 pycom16g12160
rosa_chinensis	RchiOBHm_Chr4g0427341 RchiOBHm_Chr4g0427351
rosa_laevigata	RLG00000007250 RLG00000007251
rosa_multiflora	Rmu_sc0003813.1_g000017 Rmu_sc0003813.1_g000018
rosa_roxburghii	Rroxscaffold_5G00369020 Rroxscaffold_5G00369030
rosa_rugosa	Rorug04G0216800
rosa_samantha	Rh4AG273100 Rh4AG273300 Rh4BG278800 Rh4BG278900 Rh4CG294100 Rh4CG294200 Rh4DG276200 Rh4DG276300
rosa_wichuraiana	Rw4G023700 Rw4G023710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	573, 1057
AccB1I	GGYRCC	1 cut(s)	46
AccB7I	CCANNNNNTGG	1 cut(s)	2158
AccI	GTMKAC	3 cut(s)	631, 1099, 1667
AciI	CCGC	6 cut(s)	539, 562, 1321, 2019, 2740, 2766
AclWI	GGATC	9 cut(s)	1439, 1599, 1612, 1634, 2222, 2235, 2491, 2621, 2882
AcoI	YGGCCR	1 cut(s)	1981
AcsI	RAATTY	5 cut(s)	28, 1264, 1282, 1805, 2207
AcuI	CTGAAG	3 cut(s)	1059, 3040, 3051
AcvI	CACGTG	2 cut(s)	1578, 2773
AdeI	CACNNNGTG	1 cut(s)	2776
AfiI	CCNNNNNNNGG	4 cut(s)	379, 1845, 2158, 3060
AflIII	ACRYGT	1 cut(s)	858
AhdI	GACNNNNNGTC	2 cut(s)	506, 1492
AjnI	CCWGG	7 cut(s)	253, 1239, 1531, 2076, 2319, 2629, 2788
AjuI	GAANNNNNNNTTGG	8 cut(s)	62, 94, 952, 984, 1768, 1800, 2141, 2173
Alw21I	GWGCWC	5 cut(s)	25, 1477, 1590, 1861, 2493
Alw26I	GTCTC	6 cut(s)	345, 2018, 2096, 2661, 2857, 2858
AlwI	GGATC	9 cut(s)	1439, 1599, 1612, 1634, 2222, 2235, 2491, 2621, 2882
AlwNI	CAGNNNCTG	3 cut(s)	1049, 2022, 2129
Ama87I	CYCGRG	1 cut(s)	2664
AoxI	GGCC	7 cut(s)	643, 1529, 1981, 2426, 2549, 2957, 3006
ApaI	GGGCCC	1 cut(s)	2553
ApoI	RAATTY	5 cut(s)	28, 1264, 1282, 1805, 2207
Asp700I	GAANNNNTTC	1 cut(s)	1072
AspA2I	CCTAGG	1 cut(s)	1258
AspS9I	GGNCC	8 cut(s)	928, 1012, 1243, 1414, 2287, 2549, 2550, 3080
AvaI	CYCGRG	1 cut(s)	2664
AvaII	GGWCC	6 cut(s)	928, 1012, 1243, 1414, 2287, 3080
AvrII	CCTAGG	1 cut(s)	1258
BaeGI	GKGCMC	2 cut(s)	2553, 2772
BaeI	ACNNNNGTAYC	4 cut(s)	669, 702, 1908, 1941
BamHI	GGATCC	2 cut(s)	1604, 2227
BanI	GGYRCC	1 cut(s)	46
BanII	GRGCYC	3 cut(s)	25, 1590, 2553
BarI	GAAGNNNNNNTAC	2 cut(s)	375, 407
BauI	CACGAG	1 cut(s)	1833
BbrPI	CACGTG	2 cut(s)	1578, 2773
BbsI	GAAGAC	3 cut(s)	413, 2010, 3037
Bbv12I	GWGCWC	5 cut(s)	25, 1477, 1590, 1861, 2493
BceAI	ACGGC	4 cut(s)	891, 964, 2393, 2530
BcgI	CGANNNNNNTGC	2 cut(s)	2403, 2437
BciT130I	CCWGG	7 cut(s)	255, 1241, 1533, 2078, 2321, 2631, 2790
BclI	TGATCA	1 cut(s)	1933
BcoDI	GTCTC	6 cut(s)	345, 2018, 2096, 2661, 2857, 2858
BfmI	CTRYAG	6 cut(s)	1041, 1506, 1686, 1940, 2106, 2304
BfuAI	ACCTGC	2 cut(s)	573, 1057
BglI	GCCNNNNNGGC	1 cut(s)	2709
BglII	AGATCT	1 cut(s)	115
BlnI	CCTAGG	1 cut(s)	1258
BmcAI	AGTACT	1 cut(s)	2587
Bme1390I	CCNGG	7 cut(s)	255, 1241, 1533, 2078, 2321, 2631, 2790
Bme18I	GGWCC	6 cut(s)	928, 1012, 1243, 1414, 2287, 3080
BmeRI	GACNNNNNGTC	2 cut(s)	506, 1492
BmeT110I	CYCGRG	1 cut(s)	2664
BmgT120I	GGNCC	8 cut(s)	928, 1012, 1243, 1414, 2287, 2549, 2550, 3080
BmiI	GGNNCC	8 cut(s)	48, 930, 1014, 1606, 2186, 2229, 2407, 2551
BmrFI	CCNGG	7 cut(s)	255, 1241, 1533, 2078, 2321, 2631, 2790
BoxI	GACNNNNGTC	1 cut(s)	2010
BpiI	GAAGAC	3 cut(s)	413, 2010, 3037
BpmI	CTGGAG	4 cut(s)	302, 2099, 2373, 2839
BpuEI	CTTGAG	4 cut(s)	335, 867, 1126, 2354
Bsa29I	ATCGAT	2 cut(s)	789, 2877
BsaAI	YACGTR	3 cut(s)	1578, 1698, 2773
BsaBI	GATNNNNATC	2 cut(s)	114, 1086
BsaI	GGTCTC	3 cut(s)	345, 2018, 2858
Bsc4I	CCNNNNNNNGG	4 cut(s)	379, 1845, 2158, 3060
Bse118I	RCCGGY	1 cut(s)	2959
Bse1I	ACTGG	5 cut(s)	1149, 1210, 1493, 1984, 2583
Bse3DI	GCAATG	6 cut(s)	484, 866, 2895, 2899, 2970, 2982
Bse8I	GATNNNNATC	2 cut(s)	114, 1086
BseBI	CCWGG	7 cut(s)	255, 1241, 1533, 2078, 2321, 2631, 2790
BseCI	ATCGAT	2 cut(s)	789, 2877
BseJI	GATNNNNATC	2 cut(s)	114, 1086
BseLI	CCNNNNNNNGG	4 cut(s)	379, 1845, 2158, 3060
BseMI	GCAATG	6 cut(s)	484, 866, 2895, 2899, 2970, 2982
BseMII	CTCAG	7 cut(s)	734, 1364, 1415, 1963, 2029, 2091, 2478
BseNI	ACTGG	5 cut(s)	1149, 1210, 1493, 1984, 2583
BseRI	GAGGAG	4 cut(s)	670, 1598, 2387, 2556
BseSI	GKGCMC	2 cut(s)	2553, 2772
BseYI	CCCAGC	1 cut(s)	65
BsgI	GTGCAG	2 cut(s)	903, 2443
Bsh1285I	CGRYCG	1 cut(s)	789
BshFI	GGCC	7 cut(s)	645, 1531, 1983, 2428, 2551, 2959, 3008
BshNI	GGYRCC	1 cut(s)	46
BshVI	ATCGAT	2 cut(s)	789, 2877
BsiEI	CGRYCG	1 cut(s)	789
BsiHKAI	GWGCWC	5 cut(s)	25, 1477, 1590, 1861, 2493
BsiHKCI	CYCGRG	1 cut(s)	2664
BsiSI	CCGG	3 cut(s)	50, 191, 2960
BslFI	GGGAC	6 cut(s)	436, 914, 1303, 1375, 1480, 2525
BslI	CCNNNNNNNGG	4 cut(s)	379, 1845, 2158, 3060
BsmAI	GTCTC	6 cut(s)	345, 2018, 2096, 2661, 2857, 2858
BsmFI	GGGAC	6 cut(s)	436, 914, 1303, 1375, 1480, 2525
BsmI	GAATGC	3 cut(s)	145, 520, 2325
BsnI	GGCC	7 cut(s)	645, 1531, 1983, 2428, 2551, 2959, 3008
Bso31I	GGTCTC	3 cut(s)	345, 2018, 2858
BsoBI	CYCGRG	1 cut(s)	2664
Bsp120I	GGGCCC	1 cut(s)	2549
Bsp1286I	GDGCHC	7 cut(s)	25, 1477, 1590, 1861, 2493, 2553, 2772
Bsp1407I	TGTACA	3 cut(s)	145, 2167, 2952
Bsp19I	CCATGG	3 cut(s)	2008, 2283, 2553
BspACI	CCGC	6 cut(s)	539, 562, 1321, 2019, 2740, 2766
BspANI	GGCC	7 cut(s)	645, 1531, 1983, 2428, 2551, 2959, 3008
BspCNI	CTCAG	7 cut(s)	735, 1363, 1414, 1962, 2028, 2092, 2479
BspDI	ATCGAT	2 cut(s)	789, 2877
BspLI	GGNNCC	8 cut(s)	48, 930, 1014, 1606, 2186, 2229, 2407, 2551
BspMAI	CTGCAG	1 cut(s)	2110
BspMI	ACCTGC	2 cut(s)	573, 1057
BspPI	GGATC	9 cut(s)	1439, 1599, 1612, 1634, 2222, 2235, 2491, 2621, 2882
BspQI	GCTCTTC	1 cut(s)	3020
BspT107I	GGYRCC	1 cut(s)	46
BspTNI	GGTCTC	3 cut(s)	345, 2018, 2858
BsrDI	GCAATG	6 cut(s)	484, 866, 2895, 2899, 2970, 2982
BsrFI	RCCGGY	1 cut(s)	2959
BsrGI	TGTACA	3 cut(s)	145, 2167, 2952
BsrI	ACTGG	5 cut(s)	1149, 1210, 1493, 1984, 2583
BssAI	RCCGGY	1 cut(s)	2959
BssNAI	GTATAC	1 cut(s)	1668
BssSI	CACGAG	1 cut(s)	1833
BssT1I	CCWWGG	5 cut(s)	483, 1258, 2008, 2283, 2553
Bst1107I	GTATAC	1 cut(s)	1668
Bst2BI	CACGAG	1 cut(s)	1833
Bst2UI	CCWGG	7 cut(s)	255, 1241, 1533, 2078, 2321, 2631, 2790
Bst6I	CTCTTC	2 cut(s)	2574, 3020
BstAPI	GCANNNNNTGC	1 cut(s)	2776
BstAUI	TGTACA	3 cut(s)	145, 2167, 2952
BstBAI	YACGTR	3 cut(s)	1578, 1698, 2773
BstDSI	CCRYGG	4 cut(s)	2008, 2283, 2401, 2553
BstEII	GGTNACC	1 cut(s)	2977
BstMAI	GTCTC	6 cut(s)	345, 2018, 2096, 2661, 2857, 2858
BstMCI	CGRYCG	1 cut(s)	789
BstMWI	GCNNNNNNNGC	9 cut(s)	361, 536, 545, 1330, 2105, 2709, 2776, 2894, 2965
BstNI	CCWGG	7 cut(s)	255, 1241, 1533, 2078, 2321, 2631, 2790
BstNSI	RCATGY	4 cut(s)	763, 862, 1631, 2703
BstPAI	GACNNNNGTC	1 cut(s)	2010
BstPI	GGTNACC	1 cut(s)	2977
BstSCI	CCNGG	7 cut(s)	253, 1239, 1531, 2076, 2319, 2629, 2788
BstSFI	CTRYAG	6 cut(s)	1041, 1506, 1686, 1940, 2106, 2304
BstSLI	GKGCMC	2 cut(s)	2553, 2772
BstSNI	TACGTA	1 cut(s)	1698
BstV2I	GAAGAC	3 cut(s)	413, 2010, 3037
BstX2I	RGATCY	5 cut(s)	115, 1444, 1604, 2227, 2483
BstYI	RGATCY	5 cut(s)	115, 1444, 1604, 2227, 2483
BstZ17I	GTATAC	1 cut(s)	1668
Bsu15I	ATCGAT	2 cut(s)	789, 2877
BsuRI	GGCC	7 cut(s)	645, 1531, 1983, 2428, 2551, 2959, 3008
BsuTUI	ATCGAT	2 cut(s)	789, 2877
BtgI	CCRYGG	4 cut(s)	2008, 2283, 2401, 2553
BtsI	GCAGTG	2 cut(s)	204, 581
BtsIMutI	CAGTG	6 cut(s)	204, 581, 1040, 1156, 1299, 1949
BveI	ACCTGC	2 cut(s)	573, 1057
CaiI	CAGNNNCTG	3 cut(s)	1049, 2022, 2129
Cfr10I	RCCGGY	1 cut(s)	2959
Cfr13I	GGNCC	8 cut(s)	928, 1012, 1243, 1414, 2287, 2549, 2550, 3080
ClaI	ATCGAT	2 cut(s)	789, 2877
CpoI	CGGWCCG	1 cut(s)	1414
CseI	GACGC	1 cut(s)	2357
CspCI	CAANNNNNGTGG	4 cut(s)	340, 375, 1150, 1185
CspI	CGGWCCG	1 cut(s)	1414
DraI	TTTAAA	4 cut(s)	432, 1218, 1429, 2533
DraIII	CACNNNGTG	1 cut(s)	2776
DriI	GACNNNNNGTC	2 cut(s)	506, 1492
EaeI	YGGCCR	1 cut(s)	1981
Eam1104I	CTCTTC	2 cut(s)	2574, 3020
Eam1105I	GACNNNNNGTC	2 cut(s)	506, 1492
EarI	CTCTTC	2 cut(s)	2574, 3020
Ecl136II	GAGCTC	2 cut(s)	23, 1588
Eco105I	TACGTA	1 cut(s)	1698
Eco130I	CCWWGG	5 cut(s)	483, 1258, 2008, 2283, 2553
Eco147I	AGGCCT	1 cut(s)	2428
Eco24I	GRGCYC	3 cut(s)	25, 1590, 2553
Eco31I	GGTCTC	3 cut(s)	345, 2018, 2858
Eco32I	GATATC	2 cut(s)	1761, 2785
Eco47I	GGWCC	6 cut(s)	928, 1012, 1243, 1414, 2287, 3080
Eco53kI	GAGCTC	2 cut(s)	23, 1588
Eco57I	CTGAAG	3 cut(s)	1059, 3040, 3051
Eco72I	CACGTG	2 cut(s)	1578, 2773
Eco88I	CYCGRG	1 cut(s)	2664
Eco91I	GGTNACC	1 cut(s)	2977
EcoICRI	GAGCTC	2 cut(s)	23, 1588
EcoO109I	RGGNCCY	2 cut(s)	928, 1012
EcoO65I	GGTNACC	1 cut(s)	2977
EcoRI	GAATTC	1 cut(s)	1264
EcoRII	CCWGG	7 cut(s)	253, 1239, 1531, 2076, 2319, 2629, 2788
EcoRV	GATATC	2 cut(s)	1761, 2785
EcoT14I	CCWWGG	5 cut(s)	483, 1258, 2008, 2283, 2553
EcoT22I	ATGCAT	3 cut(s)	522, 1769, 2701
EcoT38I	GRGCYC	3 cut(s)	25, 1590, 2553
ErhI	CCWWGG	5 cut(s)	483, 1258, 2008, 2283, 2553
FalI	AAGNNNNNCTT	4 cut(s)	952, 984, 1348, 1380
FaqI	GGGAC	6 cut(s)	436, 914, 1303, 1375, 1480, 2525
FauI	CCCGC	1 cut(s)	2759
FauNDI	CATATG	2 cut(s)	1228, 2929
FbaI	TGATCA	1 cut(s)	1933
FblI	GTMKAC	3 cut(s)	631, 1099, 1667
FriOI	GRGCYC	3 cut(s)	25, 1590, 2553
GsaI	CCCAGC	1 cut(s)	69
GsuI	CTGGAG	4 cut(s)	302, 2099, 2373, 2839
HaeIII	GGCC	7 cut(s)	645, 1531, 1983, 2428, 2551, 2959, 3008
HapII	CCGG	3 cut(s)	50, 191, 2960
HgaI	GACGC	1 cut(s)	2357
HincII	GTYRAC	3 cut(s)	1203, 2347, 2506
HindII	GTYRAC	3 cut(s)	1203, 2347, 2506
HindIII	AAGCTT	2 cut(s)	353, 366
HinfI	GANTC	8 cut(s)	820, 1235, 1328, 1405, 1480, 1953, 1989, 2563
HpaI	GTTAAC	1 cut(s)	1203
HpaII	CCGG	3 cut(s)	50, 191, 2960
Hpy99I	CGWCG	1 cut(s)	501
HpyCH4IV	ACGT	5 cut(s)	634, 1577, 1697, 2772, 3042
HpyF10VI	GCNNNNNNNGC	9 cut(s)	361, 536, 545, 1330, 2105, 2709, 2776, 2894, 2965
HpySE526I	ACGT	5 cut(s)	634, 1577, 1697, 2772, 3042
KroI	GCCGGC	1 cut(s)	2959
KroNI	GCCGGC	1 cut(s)	2961
Ksp22I	TGATCA	1 cut(s)	1933
KspAI	GTTAAC	1 cut(s)	1203
LguI	GCTCTTC	1 cut(s)	3020
LmnI	GCTCC	4 cut(s)	162, 1585, 2190, 2405
MaeII	ACGT	5 cut(s)	634, 1577, 1697, 2772, 3042
MaeIII	GTNAC	4 cut(s)	1975, 2198, 2219, 2977
MfeI	CAATTG	1 cut(s)	1776
MflI	RGATCY	5 cut(s)	115, 1444, 1604, 2227, 2483
MhlI	GDGCHC	7 cut(s)	25, 1477, 1590, 1861, 2493, 2553, 2772
MlyI	GAGTC	3 cut(s)	1414, 1983, 2557
MmeI	TCCRAC	5 cut(s)	243, 780, 969, 2118, 2139
Mph1103I	ATGCAT	3 cut(s)	522, 1769, 2701
MroNI	GCCGGC	1 cut(s)	2959
MroXI	GAANNNNTTC	1 cut(s)	1072
MspA1I	CMGCKG	3 cut(s)	562, 2019, 2740
MspI	CCGG	3 cut(s)	50, 191, 2960
MspR9I	CCNGG	7 cut(s)	255, 1241, 1533, 2078, 2321, 2631, 2790
MunI	CAATTG	1 cut(s)	1776
Mva1269I	GAATGC	3 cut(s)	145, 520, 2325
MvaI	CCWGG	7 cut(s)	255, 1241, 1533, 2078, 2321, 2631, 2790
MwoI	GCNNNNNNNGC	9 cut(s)	361, 536, 545, 1330, 2105, 2709, 2776, 2894, 2965
NaeI	GCCGGC	1 cut(s)	2961
NcoI	CCATGG	3 cut(s)	2008, 2283, 2553
NdeI	CATATG	2 cut(s)	1228, 2929
NgoMIV	GCCGGC	1 cut(s)	2959
NlaIV	GGNNCC	8 cut(s)	48, 930, 1014, 1606, 2186, 2229, 2407, 2551
NmeAIII	GCCGAG	2 cut(s)	2009, 2071
NmuCI	GTSAC	2 cut(s)	2198, 2219
NsiI	ATGCAT	3 cut(s)	522, 1769, 2701
NspI	RCATGY	4 cut(s)	763, 862, 1631, 2703
PaeI	GCATGC	1 cut(s)	2703
PaeR7I	CTCGAG	1 cut(s)	2664
PceI	AGGCCT	1 cut(s)	2428
PciI	ACATGT	1 cut(s)	858
PciSI	GCTCTTC	1 cut(s)	3020
PcsI	WCGNNNNNNNCGW	1 cut(s)	1414
PctI	GAATGC	3 cut(s)	145, 520, 2325
PdiI	GCCGGC	1 cut(s)	2961
PdmI	GAANNNNTTC	1 cut(s)	1072
PfeI	GAWTC	5 cut(s)	820, 1235, 1328, 1480, 1953
PflFI	GACNNNGTC	1 cut(s)	2217
PflMI	CCANNNNNTGG	1 cut(s)	2158
PfoI	TCCNGGA	1 cut(s)	2629
Ple19I	CGATCG	1 cut(s)	789
PleI	GAGTC	3 cut(s)	1413, 1983, 2557
PmaCI	CACGTG	2 cut(s)	1578, 2773
PmlI	CACGTG	2 cut(s)	1578, 2773
PpsI	GAGTC	3 cut(s)	1413, 1983, 2557
Ppu21I	YACGTR	3 cut(s)	1578, 1698, 2773
PpuMI	RGGWCCY	2 cut(s)	928, 1012
PscI	ACATGT	1 cut(s)	858
PshAI	GACNNNNGTC	1 cut(s)	2010
Psp124BI	GAGCTC	2 cut(s)	25, 1590
Psp5II	RGGWCCY	2 cut(s)	928, 1012
Psp6I	CCWGG	7 cut(s)	253, 1239, 1531, 2076, 2319, 2629, 2788
PspCI	CACGTG	2 cut(s)	1578, 2773
PspEI	GGTNACC	1 cut(s)	2977
PspFI	CCCAGC	1 cut(s)	65
PspGI	CCWGG	7 cut(s)	253, 1239, 1531, 2076, 2319, 2629, 2788
PspN4I	GGNNCC	8 cut(s)	48, 930, 1014, 1606, 2186, 2229, 2407, 2551
PspOMI	GGGCCC	1 cut(s)	2549
PspPI	GGNCC	8 cut(s)	928, 1012, 1243, 1414, 2287, 2549, 2550, 3080
PspPPI	RGGWCCY	2 cut(s)	928, 1012
PstI	CTGCAG	1 cut(s)	2110
PstNI	CAGNNNCTG	3 cut(s)	1049, 2022, 2129
PsuI	RGATCY	5 cut(s)	115, 1444, 1604, 2227, 2483
PsyI	GACNNNGTC	1 cut(s)	2217
PvuI	CGATCG	1 cut(s)	789
Rsr2I	CGGWCCG	1 cut(s)	1414
RsrII	CGGWCCG	1 cut(s)	1414
SacI	GAGCTC	2 cut(s)	25, 1590
SapI	GCTCTTC	1 cut(s)	3020
Sau96I	GGNCC	8 cut(s)	928, 1012, 1243, 1414, 2287, 2549, 2550, 3080
ScaI	AGTACT	1 cut(s)	2587
SchI	GAGTC	3 cut(s)	1414, 1983, 2557
ScrFI	CCNGG	7 cut(s)	255, 1241, 1533, 2078, 2321, 2631, 2790
SduI	GDGCHC	7 cut(s)	25, 1477, 1590, 1861, 2493, 2553, 2772
SfcI	CTRYAG	6 cut(s)	1041, 1506, 1686, 1940, 2106, 2304
Sfr274I	CTCGAG	1 cut(s)	2664
SinI	GGWCC	6 cut(s)	928, 1012, 1243, 1414, 2287, 3080
SlaI	CTCGAG	1 cut(s)	2664
SmiI	ATTTAAAT	1 cut(s)	1218
SmlI	CTYRAG	5 cut(s)	350, 882, 1141, 2333, 2664
SmoI	CTYRAG	5 cut(s)	350, 882, 1141, 2333, 2664
SnaBI	TACGTA	1 cut(s)	1698
SphI	GCATGC	1 cut(s)	2703
SseBI	AGGCCT	1 cut(s)	2428
SsiI	CCGC	6 cut(s)	539, 562, 1321, 2019, 2740, 2766
SstI	GAGCTC	2 cut(s)	25, 1590
StuI	AGGCCT	1 cut(s)	2428
StyD4I	CCNGG	7 cut(s)	253, 1239, 1531, 2076, 2319, 2629, 2788
StyI	CCWWGG	5 cut(s)	483, 1258, 2008, 2283, 2553
SwaI	ATTTAAAT	1 cut(s)	1218
TaiI	ACGT	5 cut(s)	637, 1580, 1700, 2775, 3045
TaqI	TCGA	4 cut(s)	789, 1485, 2665, 2877
TaqII	GACCGA	1 cut(s)	2882
TatI	WGTACW	5 cut(s)	145, 2167, 2585, 2672, 2952
TauI	GCSGC	2 cut(s)	1324, 2022
TfiI	GAWTC	5 cut(s)	820, 1235, 1328, 1480, 1953
TscAI	CASTG	6 cut(s)	211, 581, 1040, 1156, 1299, 1949
TseFI	GTSAC	2 cut(s)	2198, 2219
Tsp45I	GTSAC	2 cut(s)	2198, 2219
TspGWI	ACGGA	3 cut(s)	1427, 1550, 2418
TspRI	CASTG	6 cut(s)	211, 581, 1040, 1156, 1299, 1949
Tth111I	GACNNNGTC	1 cut(s)	2217
Van91I	CCANNNNNTGG	1 cut(s)	2158
VpaK11BI	GGWCC	6 cut(s)	928, 1012, 1243, 1414, 2287, 3080
XapI	RAATTY	5 cut(s)	28, 1264, 1282, 1805, 2207
XbaI	TCTAGA	1 cut(s)	1564
XceI	RCATGY	4 cut(s)	763, 862, 1631, 2703
XhoI	CTCGAG	1 cut(s)	2664
XmaJI	CCTAGG	1 cut(s)	1258
XmiI	GTMKAC	3 cut(s)	631, 1099, 1667
XmnI	GAANNNNTTC	1 cut(s)	1072
ZrmI	AGTACT	1 cut(s)	2587
Zsp2I	ATGCAT	3 cut(s)	522, 1769, 2701

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.