Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0001572

Physical Location & Seq

Genomic Coordinates Forward (+)

14950415 .. 14957577

Gene Structure 7163 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000007251

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3051 bp

ATGGAGGGTTTTGGAGCCAAGAATCGTGGGTTTTATGGTCCCGTGGCGACGGATTTGAGGGGAGTTGGGAAGAGGAGCTTGGAGTGGGATTTGAATAATTGGAAGTGGGATGGTGATCTTTTTGCTGCTAGTCCTTTGAATTCTGTGCTGTCTGATTGTAGGAGTAGGCAGTTGTTCCCGGCTGGGCCGGGAACTCCTTCCAATGCTGGCTTCTCCAACAGTTGTTCTTCAGGTTCGGATGATATCAGTCCCGGGAGTGAGAAGGGAAAGAGAGAAGTGGAGAAAAGGAGACGGGGTGTTGTTATGGAAAATGAAGAGTTGCATGATGAAGCTAGGTCTCTTAATCTTAACCTCGGAGGGCAAGCTTACCCGATTGTTGAAGGAGAGGTAAATACTGGGAAGAAGACAAAGATAGTTGGGAATGGGACTACTTCAAATCGCGCTGTTTGTCAGGTGGAGGACTGTAGGGCTGATCTTAGCAATGCCAAGGATTATCACAGACGGCATAAGGTCTGTGTTATGCATTCTAAGGCGAGTGAAGCACTGGTGGGAAATGCTAAGCAGCGGTTCTGTCAACAGTGTAGCAGGTTTCATGTTCTTAAAGAGTTTGATGAAGGGAAGAGAAGTTGTCGTAGGCGTTTGGCTGGCCATAATAAGAGGAGAAGAAAAACACTTCCTGATACTGCTGTTAATGCAGGCTCCTTGAACGATGAAATTGGAAGCAGTTATCTATTAATTAGTTTGCTGAGAATACTCTCCAGTATGTCTAATAGTTCTGATCAAACAAAGGATCAGGATCTGCTATCTCACCTGTTGAAGAGCCTAGCCAATCTTGCTGGTACAGTTGATGGGAGAAACATATCTGCATTACTTCAGGCATCTCAAGGTTTACCTAAAACTGGGTCTTCTATCAAGACTGCACAACAGGTTCCAGATACGGTTTCCAACATCTTTGAACCCAGTAGGCCTTCTGTTTCTGCCTCAAGTATGGATGATTGTGTTATTATTGAGGAACCTTTAAGGCCCATAGGACAGCACCTGATATTACCTGCATCAGATATGCAAAAGAGAAGATCTTCAGTTGATGGCGATCTTGGAAGTCAAATTACTTCAGGTCTACAGGCCAACAAGCCACTTCCTTCAAGAGAAAGTGCTCCAACCAATTCAGTTACACCGATCCAGTTACTTGAGATTGATTTAAATAGTCCATGTGATGATTCACAGGACTATTTAGAGAACCTAGGGACTTGTCATGTCACTATAAATCCAGGGATACAACAAGATTCTCACAAGTCAAGCCCACCTCAGACCAGTGGGAATTCAGACTCAACTTTTACTCAGTCACCATCAAGTTCTAGTGGAGAATCTCAGAATCGCACAGACCGCATTGTTTTTAAACTCTTTGGAAAAGACCCGAATGAACTTCCATTTGTTCTGCGATCACAGATTATCGACTGGTTATCCCATAGTCCTACAGAGATTGAAAGCTATATAAGGCCAGGATGCATCATTTTGACAATTTACCTCCGTCTAGAAAAATCCACGTGGGAGGAGCTCTGCTGTCATCTGGGATCCAGTTTGCAAAGACTTTTAGATGCCGCCAATGATCCTTTCTGGAGAACAGGATGGGTGTATACTAGGATGCAACATTTTGTTGCGTTTATGTACAATGGTCAAGTTGTCTTAGACACAACCTTACCTCTTAAAAGCCAAAAAAGTTGCAGGATATCAAGCATTAAACCAATTGCAGTCTCTTTATCTGAGAGAGCCCAGTTTGTTGTAAAAGGCTTTAACCTTCCTCATTCCACCACAAGGTTACTATGTGCTCTAGAAGGGGAGTATCTGGCGCAAGAAGCTTGTGATGACTTGACGGATGGTGCTGATACAACTGTCGAGCATGATGAGCTACAGTGCATCAGATTCTCCTGCTCTATACCAAATGTTACTGGGCGAGGATTCATTGAGGTTGAAGATCTTGGTCTCAGTAGCAGCTTCTTTCCATTTATAGTTGCAGAGCAGGAAGTGTGTTCAGAGATTTGTATGTTGGAGGATGCGATGGAGGCAGCTGAGACTGTTGATGACATCCAGGCAGATCCTGAAATATTAGAAGCCAAGAACCAGGCTATGGACTTTATACATGAATTGGGTTGGCTTCTTCATAGAAGTCATGTTAAGTTCAGACTTGGTCACCTGGATCCCAACCTAGATCTATTTCCTTTTAGACGGTTCAAATTACTTATGGAGTTTTCCGTGGATCATGACTGGTGTGCTGTAGTAAAGAAACTCTTGAAGCTTCTGTTTGACAGTACTGTTGACGCCGGAGAACATCCTTCCGTTCAGCTTGCATTATTGGATATGGCCCTCCTCCACAGAGCTGTTCGAAGAAATTGTAGACCTATGGTAGAACTGTTGTTAAGATTTGTTCCAGATAAAGGTTTAGAATCTGAACAGAAGAAATACGTTGAAGGGGAAGACAACAGTTTCTTATTTAAACCTAATGGTGTTGGTCCCCTGGGGTTGACTCCTCTTCATGTTGCAGCTAGTATTGATGGTTGTGAGCACGTATTGGATGCTTTAACTGATGATCCTGGAAAGGTGGGAATTGAAGCTTGGAAAAGTGCTCGAGACAGTACAGGAATGACACCATATGATTATGCATCCATGCAAGGCCGCTACTCCTATATCAATCTTGTTCAGAGGAAAATCAGCAAGAAACTTCAGAGCGGGCATGTGGTTCTTGATATCCCTGGCACTGTGTTAGAGAGCAATAGCAAGCAGAAGCAGTCAGATGGGCATAGATCATCAAAAGTAGCGAGCCTTGACACCGAAAAGTTTGAAATAAATGCATTAATACGAAGAGATTGCAAGTTATGTAGCCAGAAACTAGCTTATGGCAGCACAAGGTCACTGGTGTACAGGCCGGCAATGTTGTCAATGGTGGCCATTGCTGCCGTCTGTGTCTGTGTGGCCTTGCTCTTTAAGAGCACACCTGAAGTTGTTTTCATCTTCCACCCCTTCCGGTGGGAGCATTTGAAGTTTGGCTCAAGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SBP

Protein Analysis

1017

Amino Acids

112.52

Weight (kDa)

6.25

Isoelectric Point (pI)

49.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SBP	PF03110	150 - 223	1.5e-29	SBP domain
Ig_SPL7	PF26102	570 - 681	7.1e-44	SPL7-like, immunoglobulin-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001572)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47070 AT2G47070 AT3G60030
fragaria_vesca	FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420 FvH4_4g21420
malus_domestica	MD13G1141300.v1.1 MD13G1141400.v1.1 MD16G1137600.v1.1 MD16G1137700.v1.1
prunus_persica	Prupe.1G106500_v2.0.a1 Prupe.1G106500_v2.0.a1 Prupe.1G106600_v2.0.a1
pyrus_communis	pycom13g12280 pycom13g12290 pycom16g12140 pycom16g12150 pycom16g12160
rosa_chinensis	RchiOBHm_Chr4g0427341 RchiOBHm_Chr4g0427351
rosa_laevigata	RLG00000007250 RLG00000007251
rosa_multiflora	Rmu_sc0003813.1_g000017 Rmu_sc0003813.1_g000018
rosa_roxburghii	Rroxscaffold_5G00369020 Rroxscaffold_5G00369030
rosa_rugosa	Rorug04G0216800
rosa_samantha	Rh4AG273100 Rh4AG273300 Rh4BG278800 Rh4BG278900 Rh4CG294100 Rh4CG294200 Rh4DG276200 Rh4DG276300
rosa_wichuraiana	Rw4G023700 Rw4G023710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	576, 1057
AccB7I	CCANNNNNTGG	1 cut(s)	2125
AccBSI	CCGCTC	1 cut(s)	2724
AccI	GTMKAC	3 cut(s)	1117, 1634, 2392
AccII	CGCG	1 cut(s)	441
AciI	CCGC	5 cut(s)	565, 1384, 1599, 2671, 2724
AcoI	YGGCCR	2 cut(s)	646, 2940
AcsI	RAATTY	2 cut(s)	139, 1318
AcuI	CTGAAG	6 cut(s)	213, 857, 1062, 1095, 2702, 3012
AcvI	CACGTG	1 cut(s)	1545
AcyI	GRCGYC	1 cut(s)	2316
AfaI	GTAC	5 cut(s)	841, 1667, 2308, 2632, 2915
AfiI	CCNNNNNNNGG	5 cut(s)	899, 1812, 2125, 2432, 3021
AjnI	CCWGG	8 cut(s)	1267, 1498, 2085, 2118, 2190, 2511, 2587, 2746
AjuI	GAANNNNNNNTTGG	8 cut(s)	62, 94, 194, 226, 1595, 1627, 2593, 2625
Alw21I	GWGCWC	6 cut(s)	1156, 1557, 1828, 2562, 2623, 2987
Alw26I	GTCTC	6 cut(s)	283, 342, 1756, 1985, 2063, 2619
AlwNI	CAGNNNCTG	3 cut(s)	799, 1039, 2096
Ama87I	CYCGRG	2 cut(s)	251, 2622
ApeKI	GCWGC	7 cut(s)	125, 562, 1989, 2063, 2537, 2895, 2948
ApoI	RAATTY	2 cut(s)	139, 1318
AseI	ATTAAT	2 cut(s)	734, 2849
Asp700I	GAANNNNTTC	2 cut(s)	196, 1075
AspA2I	CCTAGG	1 cut(s)	1240
AspLEI	GCGC	2 cut(s)	443, 1849
AspS9I	GGNCC	5 cut(s)	38, 185, 1023, 2359, 2507
AsuC2I	CCSGG	4 cut(s)	179, 189, 252, 253
AsuHPI	GGTGA	4 cut(s)	125, 800, 1335, 2180
AsuII	TTCGAA	1 cut(s)	2380
AvaI	CYCGRG	2 cut(s)	251, 2622
AvaII	GGWCC	2 cut(s)	38, 2507
AvrII	CCTAGG	1 cut(s)	1240
BaeI	ACNNNNGTAYC	4 cut(s)	672, 705, 1875, 1908
BalI	TGGCCA	2 cut(s)	648, 2942
BamHI	GGATCC	2 cut(s)	1571, 2194
BanII	GRGCYC	2 cut(s)	1557, 1771
BarI	GAAGNNNNNNTAC	2 cut(s)	1090, 1122
BbrPI	CACGTG	1 cut(s)	1545
BbsI	GAAGAC	3 cut(s)	410, 897, 2478
Bbv12I	GWGCWC	6 cut(s)	1156, 1557, 1828, 2562, 2623, 2987
BbvI	GCAGC	7 cut(s)	112, 574, 2001, 2075, 2549, 2907, 2935
BccI	CCATC	9 cut(s)	104, 842, 1079, 1354, 1620, 1868, 2050, 2543, 2783
BceAI	ACGGC	2 cut(s)	518, 2936
BcgI	CGANNNNNNTGC	2 cut(s)	2844, 2878
BciT130I	CCWGG	8 cut(s)	1269, 1500, 2087, 2120, 2192, 2513, 2589, 2748
BciVI	GTATCC	1 cut(s)	1266
BclI	TGATCA	1 cut(s)	778
BcnI	CCSGG	4 cut(s)	179, 189, 252, 253
BcoDI	GTCTC	6 cut(s)	283, 342, 1756, 1985, 2063, 2619
BfmI	CTRYAG	5 cut(s)	463, 1118, 1473, 1907, 2271
BfuAI	ACCTGC	2 cut(s)	576, 1057
BfuI	GTATCC	1 cut(s)	1266
BglII	AGATCT	3 cut(s)	1073, 1972, 2206
BisI	GCNGC	9 cut(s)	126, 563, 1599, 1990, 2064, 2538, 2671, 2896, 2949
BlnI	CCTAGG	1 cut(s)	1240
BlpI	GCTNAGC	1 cut(s)	558
BlsI	GCNGC	9 cut(s)	127, 564, 1600, 1991, 2065, 2539, 2672, 2897, 2950
BmcAI	AGTACT	1 cut(s)	2308
Bme18I	GGWCC	2 cut(s)	38, 2507
BmeT110I	CYCGRG	2 cut(s)	251, 2622
BmgT120I	GGNCC	5 cut(s)	38, 185, 1023, 2359, 2507
BmiI	GGNNCC	8 cut(s)	16, 40, 700, 930, 1014, 1573, 2196, 2509
BmrI	ACTGGG	5 cut(s)	405, 909, 954, 1765, 1956
BmuI	ACTGGG	5 cut(s)	405, 909, 954, 1765, 1956
BpiI	GAAGAC	3 cut(s)	410, 897, 2478
BpmI	CTGGAG	2 cut(s)	742, 1636
Bpu1102I	GCTNAGC	1 cut(s)	558
Bpu14I	TTCGAA	1 cut(s)	2380
BpuEI	CTTGAG	4 cut(s)	867, 967, 1208, 3028
BpuMI	CCSGG	4 cut(s)	179, 189, 252, 253
BsaAI	YACGTR	2 cut(s)	1545, 2563
BsaBI	GATNNNNATC	3 cut(s)	114, 795, 1089
BsaHI	GRCGYC	1 cut(s)	2316
BsaI	GGTCTC	2 cut(s)	342, 1985
BsaWI	WCCGGW	1 cut(s)	3018
BsaXI	ACNNNNNCTCC	2 cut(s)	280, 310
Bsc4I	CCNNNNNNNGG	5 cut(s)	899, 1812, 2125, 2432, 3021
Bse118I	RCCGGY	1 cut(s)	2920
Bse3DI	GCAATG	3 cut(s)	487, 2931, 2943
Bse8I	GATNNNNATC	3 cut(s)	114, 795, 1089
BseBI	CCWGG	8 cut(s)	1269, 1500, 2087, 2120, 2192, 2513, 2589, 2748
BseJI	GATNNNNATC	3 cut(s)	114, 795, 1089
BseLI	CCNNNNNNNGG	5 cut(s)	899, 1812, 2125, 2432, 3021
BseMI	GCAATG	3 cut(s)	487, 2931, 2943
BseMII	CTCAG	7 cut(s)	737, 1319, 1352, 1382, 1752, 1996, 2058
BseRI	GAGGAG	5 cut(s)	88, 673, 1565, 2354, 2514
BseXI	GCAGC	7 cut(s)	112, 574, 2001, 2075, 2549, 2907, 2935
BseYI	CCCAGC	1 cut(s)	182
BsgI	GTGCAG	1 cut(s)	903
Bsh1236I	CGCG	1 cut(s)	441
BsiHKAI	GWGCWC	6 cut(s)	1156, 1557, 1828, 2562, 2623, 2987
BsiHKCI	CYCGRG	2 cut(s)	251, 2622
BsiSI	CCGG	6 cut(s)	179, 188, 252, 2319, 2921, 3019
BslFI	GGGAC	5 cut(s)	24, 234, 439, 1258, 2493
BslI	CCNNNNNNNGG	5 cut(s)	899, 1812, 2125, 2432, 3021
BsmAI	GTCTC	6 cut(s)	283, 342, 1756, 1985, 2063, 2619
BsmBI	CGTCTC	1 cut(s)	283
BsmFI	GGGAC	5 cut(s)	24, 234, 439, 1258, 2493
BsmI	GAATGC	1 cut(s)	523
Bso31I	GGTCTC	2 cut(s)	342, 1985
BsoBI	CYCGRG	2 cut(s)	251, 2622
Bsp119I	TTCGAA	1 cut(s)	2380
Bsp1286I	GDGCHC	7 cut(s)	1156, 1557, 1771, 1828, 2562, 2623, 2987
Bsp1407I	TGTACA	2 cut(s)	1665, 2913
Bsp1720I	GCTNAGC	1 cut(s)	558
BspACI	CCGC	5 cut(s)	565, 1384, 1599, 2671, 2724
BspCNI	CTCAG	7 cut(s)	738, 1318, 1351, 1381, 1753, 1995, 2059
BspFNI	CGCG	1 cut(s)	441
BspHI	TCATGA	1 cut(s)	2257
BspLI	GGNNCC	8 cut(s)	16, 40, 700, 930, 1014, 1573, 2196, 2509
BspMI	ACCTGC	2 cut(s)	576, 1057
BspQI	GCTCTTC	1 cut(s)	812
BspT104I	TTCGAA	1 cut(s)	2380
BspTNI	GGTCTC	2 cut(s)	342, 1985
BsrBI	CCGCTC	1 cut(s)	2724
BsrDI	GCAATG	3 cut(s)	487, 2931, 2943
BsrFI	RCCGGY	1 cut(s)	2920
BsrGI	TGTACA	2 cut(s)	1665, 2913
BssAI	RCCGGY	1 cut(s)	2920
BssNAI	GTATAC	1 cut(s)	1635
BssNI	GRCGYC	1 cut(s)	2316
BssT1I	CCWWGG	2 cut(s)	486, 1240
Bst1107I	GTATAC	1 cut(s)	1635
Bst2UI	CCWGG	8 cut(s)	1269, 1500, 2087, 2120, 2192, 2513, 2589, 2748
Bst6I	CTCTTC	6 cut(s)	65, 309, 614, 812, 2532, 2851
BstACI	GRCGYC	1 cut(s)	2316
BstAUI	TGTACA	2 cut(s)	1665, 2913
BstBAI	YACGTR	2 cut(s)	1545, 2563
BstBI	TTCGAA	1 cut(s)	2380
BstC8I	GCNNGC	9 cut(s)	208, 363, 646, 697, 2343, 2726, 2774, 2815, 2922
BstDSI	CCRYGG	2 cut(s)	42, 2250
BstEII	GGTNACC	1 cut(s)	2186
BstFNI	CGCG	1 cut(s)	441
BstHHI	GCGC	2 cut(s)	443, 1849
BstMAI	GTCTC	6 cut(s)	283, 342, 1756, 1985, 2063, 2619
BstMWI	GCNNNNNNNGC	8 cut(s)	539, 692, 833, 1383, 1853, 1903, 2060, 2948
BstNI	CCWGG	8 cut(s)	1269, 1500, 2087, 2120, 2192, 2513, 2589, 2748
BstNSI	RCATGY	1 cut(s)	2732
BstPI	GGTNACC	1 cut(s)	2186
BstSFI	CTRYAG	5 cut(s)	463, 1118, 1473, 1907, 2271
BstUI	CGCG	1 cut(s)	441
BstV1I	GCAGC	7 cut(s)	112, 574, 2001, 2075, 2549, 2907, 2935
BstV2I	GAAGAC	3 cut(s)	410, 897, 2478
BstX2I	RGATCY	7 cut(s)	796, 1073, 1571, 1972, 2092, 2194, 2206
BstYI	RGATCY	7 cut(s)	796, 1073, 1571, 1972, 2092, 2194, 2206
BstZ17I	GTATAC	1 cut(s)	1635
BsuI	GTATCC	1 cut(s)	1266
BtgI	CCRYGG	2 cut(s)	42, 2250
BtgZI	GCGATG	1 cut(s)	2069
BtsIMutI	CAGTG	6 cut(s)	542, 584, 1318, 1916, 2751, 2906
BveI	ACCTGC	2 cut(s)	576, 1057
Cac8I	GCNNGC	9 cut(s)	208, 363, 646, 697, 2343, 2726, 2774, 2815, 2922
CaiI	CAGNNNCTG	3 cut(s)	799, 1039, 2096
CciI	TCATGA	1 cut(s)	2257
CfoI	GCGC	2 cut(s)	443, 1849
Cfr10I	RCCGGY	1 cut(s)	2920
Cfr13I	GGNCC	5 cut(s)	38, 185, 1023, 2359, 2507
Cfr9I	CCCGGG	1 cut(s)	251
CseI	GACGC	1 cut(s)	2324
Csp6I	GTAC	5 cut(s)	840, 1666, 2307, 2631, 2914
CspCI	CAANNNNNGTGG	2 cut(s)	7, 42
CviQI	GTAC	5 cut(s)	840, 1666, 2307, 2631, 2914
DraI	TTTAAA	3 cut(s)	1200, 1396, 2491
EaeI	YGGCCR	2 cut(s)	646, 2940
Eam1104I	CTCTTC	6 cut(s)	65, 309, 614, 812, 2532, 2851
EarI	CTCTTC	6 cut(s)	65, 309, 614, 812, 2532, 2851
Ecl136II	GAGCTC	1 cut(s)	1555
Eco130I	CCWWGG	2 cut(s)	486, 1240
Eco147I	AGGCCT	1 cut(s)	967
Eco24I	GRGCYC	2 cut(s)	1557, 1771
Eco31I	GGTCTC	2 cut(s)	342, 1985
Eco32I	GATATC	3 cut(s)	244, 1728, 2743
Eco47I	GGWCC	2 cut(s)	38, 2507
Eco53kI	GAGCTC	1 cut(s)	1555
Eco57I	CTGAAG	6 cut(s)	213, 857, 1062, 1095, 2702, 3012
Eco72I	CACGTG	1 cut(s)	1545
Eco88I	CYCGRG	2 cut(s)	251, 2622
Eco91I	GGTNACC	1 cut(s)	2186
EcoICRI	GAGCTC	1 cut(s)	1555
EcoO65I	GGTNACC	1 cut(s)	2186
EcoRI	GAATTC	2 cut(s)	139, 1318
EcoRII	CCWGG	8 cut(s)	1267, 1498, 2085, 2118, 2190, 2511, 2587, 2746
EcoRV	GATATC	3 cut(s)	244, 1728, 2743
EcoT14I	CCWWGG	2 cut(s)	486, 1240
EcoT22I	ATGCAT	4 cut(s)	525, 1508, 2659, 2848
EcoT38I	GRGCYC	2 cut(s)	1557, 1771
ErhI	CCWWGG	2 cut(s)	486, 1240
Esp3I	CGTCTC	1 cut(s)	283
FalI	AAGNNNNNCTT	4 cut(s)	62, 94, 2270, 2302
FaqI	GGGAC	5 cut(s)	24, 234, 439, 1258, 2493
FauI	CCCGC	1 cut(s)	2717
FauNDI	CATATG	1 cut(s)	2647
FbaI	TGATCA	1 cut(s)	778
FblI	GTMKAC	3 cut(s)	1117, 1634, 2392
Fnu4HI	GCNGC	9 cut(s)	126, 563, 1599, 1990, 2064, 2538, 2671, 2896, 2949
FriOI	GRGCYC	2 cut(s)	1557, 1771
Fsp4HI	GCNGC	9 cut(s)	126, 563, 1599, 1990, 2064, 2538, 2671, 2896, 2949
GlaI	GCGC	2 cut(s)	442, 1848
GluI	GCNGC	9 cut(s)	126, 563, 1599, 1990, 2064, 2538, 2671, 2896, 2949
GsaI	CCCAGC	1 cut(s)	186
GsuI	CTGGAG	2 cut(s)	742, 1636
HapII	CCGG	6 cut(s)	179, 188, 252, 2319, 2921, 3019
HgaI	GACGC	1 cut(s)	2324
HhaI	GCGC	2 cut(s)	443, 1849
Hin1I	GRCGYC	1 cut(s)	2316
Hin6I	GCGC	2 cut(s)	441, 1847
HinP1I	GCGC	2 cut(s)	441, 1847
HincII	GTYRAC	3 cut(s)	575, 2314, 2520
HindII	GTYRAC	3 cut(s)	575, 2314, 2520
HindIII	AAGCTT	4 cut(s)	363, 1854, 2291, 2607
HpaII	CCGG	6 cut(s)	179, 188, 252, 2319, 2921, 3019
HphI	GGTGA	4 cut(s)	125, 800, 1335, 2180
Hpy166II	GTNNAC	8 cut(s)	575, 890, 1118, 1635, 2314, 2393, 2520, 2914
Hpy8I	GTNNAC	8 cut(s)	575, 890, 1118, 1635, 2314, 2393, 2520, 2914
Hpy99I	CGWCG	1 cut(s)	52
HpyCH4IV	ACGT	3 cut(s)	1544, 2460, 2562
HpyF10VI	GCNNNNNNNGC	8 cut(s)	539, 692, 833, 1383, 1853, 1903, 2060, 2948
HpySE526I	ACGT	3 cut(s)	1544, 2460, 2562
Hsp92I	GRCGYC	1 cut(s)	2316
HspAI	GCGC	2 cut(s)	441, 1847
KroI	GCCGGC	1 cut(s)	2920
KroNI	GCCGGC	1 cut(s)	2922
Ksp22I	TGATCA	1 cut(s)	778
LguI	GCTCTTC	1 cut(s)	812
LmnI	GCTCC	6 cut(s)	14, 75, 704, 1159, 1552, 3025
Lsp1109I	GCAGC	7 cut(s)	112, 574, 2001, 2075, 2549, 2907, 2935
MaeII	ACGT	3 cut(s)	1544, 2460, 2562
MaeIII	GTNAC	8 cut(s)	1168, 1182, 1255, 1341, 1815, 1942, 2186, 2904
MbiI	CCGCTC	1 cut(s)	2724
MfeI	CAATTG	1 cut(s)	1743
MflI	RGATCY	7 cut(s)	796, 1073, 1571, 1972, 2092, 2194, 2206
MhlI	GDGCHC	7 cut(s)	1156, 1557, 1771, 1828, 2562, 2623, 2987
MlsI	TGGCCA	2 cut(s)	648, 2942
MluNI	TGGCCA	2 cut(s)	648, 2942
MlyI	GAGTC	2 cut(s)	1319, 2515
MmeI	TCCRAC	4 cut(s)	240, 969, 1181, 2025
Mox20I	TGGCCA	2 cut(s)	648, 2942
Mph1103I	ATGCAT	4 cut(s)	525, 1508, 2659, 2848
MroNI	GCCGGC	1 cut(s)	2920
MroXI	GAANNNNTTC	2 cut(s)	196, 1075
MscI	TGGCCA	2 cut(s)	648, 2942
Msp20I	TGGCCA	2 cut(s)	648, 2942
MspA1I	CMGCKG	2 cut(s)	565, 2066
MspI	CCGG	6 cut(s)	179, 188, 252, 2319, 2921, 3019
MunI	CAATTG	1 cut(s)	1743
Mva1269I	GAATGC	1 cut(s)	523
MvaI	CCWGG	8 cut(s)	1269, 1500, 2087, 2120, 2192, 2513, 2589, 2748
MvnI	CGCG	1 cut(s)	441
MwoI	GCNNNNNNNGC	8 cut(s)	539, 692, 833, 1383, 1853, 1903, 2060, 2948
NaeI	GCCGGC	1 cut(s)	2922
NciI	CCSGG	4 cut(s)	179, 189, 252, 253
NdeI	CATATG	1 cut(s)	2647
NgoMIV	GCCGGC	1 cut(s)	2920
NlaIV	GGNNCC	8 cut(s)	16, 40, 700, 930, 1014, 1573, 2196, 2509
NmuCI	GTSAC	4 cut(s)	1255, 1341, 2186, 2904
NsiI	ATGCAT	4 cut(s)	525, 1508, 2659, 2848
NspI	RCATGY	1 cut(s)	2732
NspV	TTCGAA	1 cut(s)	2380
PaeR7I	CTCGAG	1 cut(s)	2622
PagI	TCATGA	1 cut(s)	2257
PasI	CCCWGGG	1 cut(s)	2512
PceI	AGGCCT	1 cut(s)	967
PciSI	GCTCTTC	1 cut(s)	812
PctI	GAATGC	1 cut(s)	523
PdiI	GCCGGC	1 cut(s)	2922
PdmI	GAANNNNTTC	2 cut(s)	196, 1075
PfeI	GAWTC	8 cut(s)	22, 1217, 1283, 1364, 1372, 1920, 1956, 2441
PflFI	GACNNNGTC	1 cut(s)	2184
PflMI	CCANNNNNTGG	1 cut(s)	2125
PfoI	TCCNGGA	1 cut(s)	2587
PkrI	GCNGC	9 cut(s)	127, 564, 1600, 1991, 2065, 2539, 2672, 2897, 2950
PleI	GAGTC	2 cut(s)	1319, 2515
PmaCI	CACGTG	1 cut(s)	1545
PmlI	CACGTG	1 cut(s)	1545
PpsI	GAGTC	2 cut(s)	1319, 2515
Ppu21I	YACGTR	2 cut(s)	1545, 2563
PshBI	ATTAAT	2 cut(s)	734, 2849
Psp124BI	GAGCTC	1 cut(s)	1557
Psp6I	CCWGG	8 cut(s)	1267, 1498, 2085, 2118, 2190, 2511, 2587, 2746
PspCI	CACGTG	1 cut(s)	1545
PspEI	GGTNACC	1 cut(s)	2186
PspFI	CCCAGC	1 cut(s)	182
PspGI	CCWGG	8 cut(s)	1267, 1498, 2085, 2118, 2190, 2511, 2587, 2746
PspN4I	GGNNCC	8 cut(s)	16, 40, 700, 930, 1014, 1573, 2196, 2509
PspPI	GGNCC	5 cut(s)	38, 185, 1023, 2359, 2507
PstNI	CAGNNNCTG	3 cut(s)	799, 1039, 2096
PsuI	RGATCY	7 cut(s)	796, 1073, 1571, 1972, 2092, 2194, 2206
PsyI	GACNNNGTC	1 cut(s)	2184
PvuII	CAGCTG	1 cut(s)	2066
RsaI	GTAC	5 cut(s)	841, 1667, 2308, 2632, 2915
RsaNI	GTAC	5 cut(s)	840, 1666, 2307, 2631, 2914
SacI	GAGCTC	1 cut(s)	1557
SapI	GCTCTTC	1 cut(s)	812
SatI	GCNGC	9 cut(s)	126, 563, 1599, 1990, 2064, 2538, 2671, 2896, 2949
Sau96I	GGNCC	5 cut(s)	38, 185, 1023, 2359, 2507
ScaI	AGTACT	1 cut(s)	2308
SchI	GAGTC	2 cut(s)	1319, 2515
SduI	GDGCHC	7 cut(s)	1156, 1557, 1771, 1828, 2562, 2623, 2987
SfcI	CTRYAG	5 cut(s)	463, 1118, 1473, 1907, 2271
Sfr274I	CTCGAG	1 cut(s)	2622
SfuI	TTCGAA	1 cut(s)	2380
SinI	GGWCC	2 cut(s)	38, 2507
SlaI	CTCGAG	1 cut(s)	2622
SmaI	CCCGGG	1 cut(s)	253
SmiI	ATTTAAAT	1 cut(s)	1200
SmlI	CTYRAG	5 cut(s)	882, 982, 1187, 2622, 3043
SmoI	CTYRAG	5 cut(s)	882, 982, 1187, 2622, 3043
SseBI	AGGCCT	1 cut(s)	967
SsiI	CCGC	5 cut(s)	565, 1384, 1599, 2671, 2724
SspI	AATATT	1 cut(s)	2103
SstI	GAGCTC	1 cut(s)	1557
StuI	AGGCCT	1 cut(s)	967
StyI	CCWWGG	2 cut(s)	486, 1240
SwaI	ATTTAAAT	1 cut(s)	1200
TaiI	ACGT	3 cut(s)	1547, 2463, 2565
TaqI	TCGA	4 cut(s)	1452, 1893, 2380, 2623
TatI	WGTACW	4 cut(s)	1665, 2306, 2630, 2913
TauI	GCSGC	2 cut(s)	1601, 2673
TfiI	GAWTC	8 cut(s)	22, 1217, 1283, 1364, 1372, 1920, 1956, 2441
TscAI	CASTG	6 cut(s)	549, 584, 1318, 1916, 2758, 2913
TseFI	GTSAC	4 cut(s)	1255, 1341, 2186, 2904
TseI	GCWGC	7 cut(s)	125, 562, 1989, 2063, 2537, 2895, 2948
Tsp45I	GTSAC	4 cut(s)	1255, 1341, 2186, 2904
TspGWI	ACGGA	5 cut(s)	65, 1517, 1886, 2239, 2323
TspMI	CCCGGG	1 cut(s)	251
TspRI	CASTG	6 cut(s)	549, 584, 1318, 1916, 2758, 2913
Tth111I	GACNNNGTC	1 cut(s)	2184
Van91I	CCANNNNNTGG	1 cut(s)	2125
VpaK11BI	GGWCC	2 cut(s)	38, 2507
VspI	ATTAAT	2 cut(s)	734, 2849
XapI	RAATTY	2 cut(s)	139, 1318
XbaI	TCTAGA	2 cut(s)	1531, 1828
XceI	RCATGY	1 cut(s)	2732
XhoI	CTCGAG	1 cut(s)	2622
XmaI	CCCGGG	1 cut(s)	251
XmaJI	CCTAGG	1 cut(s)	1240
XmiI	GTMKAC	3 cut(s)	1117, 1634, 2392
XmnI	GAANNNNTTC	2 cut(s)	196, 1075
ZrmI	AGTACT	1 cut(s)	2308
Zsp2I	ATGCAT	4 cut(s)	525, 1508, 2659, 2848

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.