26S proteasome non-ATPase regulatory subunit 6 homolog
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G24820 AT4G24820 |
| fragaria_vesca | FvH4_3g25540 |
| malus_domestica | MD06G1151500.v1.1 MD06G1156100.v1.1 MD14G1163300.v1.1 |
| prunus_persica | Prupe.5G156700_v2.0.a1 |
| pyrus_communis | pycom06g13920 pycom14g13590 |
| rosa_chinensis | RchiOBHm_Chr5g0017921 RchiOBHm_Chr5g0044171 RchiOBHm_Chr5g0065961 RchiOBHm_Chr7g0191031 RchiOBHm_Chr7g0191061 |
| rosa_laevigata | RLG00000004478 |
| rosa_multiflora | Rmu_sc0000184.1_g000009 Rmu_sc0002080.1_g000014 Rmu_sc0005637.1_g000001 Rmu_sc0015000.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00036890 Rroxscaffold_3G00264070 |
| rosa_rugosa | Rorug06G0508300 |
| rosa_samantha | Rh7AG115600 Rh7BG117900 Rh7BG118300 Rh7CG120800 Rh7CG186900 Rh7DG119300 |
| rosa_wichuraiana | Rw2G007700 Rw7G010050 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1037 |
| Acc36I | ACCTGC | 1 cut(s) | 1037 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 142 |
| AccBSI | CCGCTC | 1 cut(s) | 14 |
| AccII | CGCG | 1 cut(s) | 1000 |
| AciI | CCGC | 5 cut(s) | 14, 214, 219, 830, 863 |
| AclWI | GGATC | 3 cut(s) | 28, 126, 198 |
| AcsI | RAATTY | 3 cut(s) | 274, 571, 630 |
| AcuI | CTGAAG | 1 cut(s) | 396 |
| AfaI | GTAC | 5 cut(s) | 155, 554, 797, 860, 905 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 142, 535, 744, 799 |
| AflII | CTTAAG | 2 cut(s) | 236, 701 |
| AgsI | TTSAA | 2 cut(s) | 500, 944 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1065 |
| AjiI | CACGTC | 1 cut(s) | 412 |
| AjnI | CCWGG | 3 cut(s) | 597, 987, 1092 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 41, 73 |
| Alw26I | GTCTC | 3 cut(s) | 638, 1052, 1149 |
| AlwI | GGATC | 3 cut(s) | 28, 126, 198 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1141 |
| AoxI | GGCC | 2 cut(s) | 216, 957 |
| ApeKI | GCWGC | 4 cut(s) | 28, 361, 584, 1010 |
| ApoI | RAATTY | 3 cut(s) | 274, 571, 630 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 633 |
| AspLEI | GCGC | 1 cut(s) | 1002 |
| AspS9I | GGNCC | 1 cut(s) | 216 |
| AsuHPI | GGTGA | 3 cut(s) | 26, 293, 521 |
| BauI | CACGAG | 1 cut(s) | 1146 |
| BbvI | GCAGC | 4 cut(s) | 40, 373, 571, 997 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 239, 273 |
| BciT130I | CCWGG | 3 cut(s) | 599, 989, 1094 |
| BcoDI | GTCTC | 3 cut(s) | 638, 1052, 1149 |
| BfaI | CTAG | 1 cut(s) | 44 |
| BfrI | CTTAAG | 2 cut(s) | 236, 701 |
| BfuAI | ACCTGC | 1 cut(s) | 1037 |
| BglII | AGATCT | 1 cut(s) | 729 |
| BisI | GCNGC | 5 cut(s) | 29, 219, 362, 585, 1011 |
| BlsI | GCNGC | 5 cut(s) | 30, 220, 363, 586, 1012 |
| Bme1390I | CCNGG | 3 cut(s) | 599, 989, 1094 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1065 |
| BmgBI | CACGTC | 1 cut(s) | 412 |
| BmgT120I | GGNCC | 1 cut(s) | 216 |
| BmiI | GGNNCC | 1 cut(s) | 147 |
| BmrFI | CCNGG | 3 cut(s) | 599, 989, 1094 |
| BmrI | ACTGGG | 1 cut(s) | 523 |
| BmsI | GCATC | 4 cut(s) | 253, 684, 709, 1063 |
| BmuI | ACTGGG | 1 cut(s) | 523 |
| Bpu10I | CCTNAGC | 1 cut(s) | 312 |
| BpuEI | CTTGAG | 1 cut(s) | 89 |
| Bsa29I | ATCGAT | 1 cut(s) | 1155 |
| BsaBI | GATNNNNATC | 1 cut(s) | 189 |
| BsaI | GGTCTC | 1 cut(s) | 638 |
| BsaJI | CCNNGG | 1 cut(s) | 136 |
| BsaWI | WCCGGW | 1 cut(s) | 870 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 142, 535, 744, 799 |
| Bse118I | RCCGGY | 1 cut(s) | 528 |
| Bse1I | ACTGG | 2 cut(s) | 518, 793 |
| Bse3DI | GCAATG | 2 cut(s) | 954, 1005 |
| Bse8I | GATNNNNATC | 1 cut(s) | 189 |
| BseBI | CCWGG | 3 cut(s) | 599, 989, 1094 |
| BseCI | ATCGAT | 1 cut(s) | 1155 |
| BseDI | CCNNGG | 1 cut(s) | 136 |
| BseGI | GGATG | 1 cut(s) | 70 |
| BseJI | GATNNNNATC | 1 cut(s) | 189 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 142, 535, 744, 799 |
| BseMI | GCAATG | 2 cut(s) | 954, 1005 |
| BseMII | CTCAG | 6 cut(s) | 38, 102, 717, 756, 825, 923 |
| BseNI | ACTGG | 2 cut(s) | 518, 793 |
| BseRI | GAGGAG | 2 cut(s) | 53, 245 |
| BseXI | GCAGC | 4 cut(s) | 40, 373, 571, 997 |
| BseYI | CCCAGC | 1 cut(s) | 1013 |
| BsgI | GTGCAG | 1 cut(s) | 854 |
| Bsh1236I | CGCG | 1 cut(s) | 1000 |
| BshFI | GGCC | 2 cut(s) | 218, 959 |
| BshVI | ATCGAT | 1 cut(s) | 1155 |
| BsiSI | CCGG | 2 cut(s) | 529, 871 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 142, 535, 744, 799 |
| BsmAI | GTCTC | 3 cut(s) | 638, 1052, 1149 |
| BsmI | GAATGC | 1 cut(s) | 1087 |
| BsnI | GGCC | 2 cut(s) | 218, 959 |
| Bso31I | GGTCTC | 1 cut(s) | 638 |
| Bsp143I | GATC | 7 cut(s) | 20, 131, 190, 457, 729, 1152, 1156 |
| Bsp19I | CCATGG | 1 cut(s) | 136 |
| BspACI | CCGC | 5 cut(s) | 14, 214, 219, 830, 863 |
| BspANI | GGCC | 2 cut(s) | 218, 959 |
| BspCNI | CTCAG | 6 cut(s) | 37, 103, 718, 757, 824, 922 |
| BspDI | ATCGAT | 1 cut(s) | 1155 |
| BspFNI | CGCG | 1 cut(s) | 1000 |
| BspLI | GGNNCC | 1 cut(s) | 147 |
| BspMI | ACCTGC | 1 cut(s) | 1037 |
| BspPI | GGATC | 3 cut(s) | 28, 126, 198 |
| BspQI | GCTCTTC | 1 cut(s) | 62 |
| BspTI | CTTAAG | 2 cut(s) | 236, 701 |
| BspTNI | GGTCTC | 1 cut(s) | 638 |
| BsrBI | CCGCTC | 1 cut(s) | 14 |
| BsrDI | GCAATG | 2 cut(s) | 954, 1005 |
| BsrFI | RCCGGY | 1 cut(s) | 528 |
| BsrI | ACTGG | 2 cut(s) | 518, 793 |
| BssAI | RCCGGY | 1 cut(s) | 528 |
| BssECI | CCNNGG | 1 cut(s) | 136 |
| BssMI | GATC | 7 cut(s) | 20, 131, 190, 457, 729, 1152, 1156 |
| BssSI | CACGAG | 1 cut(s) | 1146 |
| BssT1I | CCWWGG | 1 cut(s) | 136 |
| Bst2BI | CACGAG | 1 cut(s) | 1146 |
| Bst2UI | CCWGG | 3 cut(s) | 599, 989, 1094 |
| Bst4CI | ACNGT | 9 cut(s) | 8, 388, 664, 739, 851, 898, 940, 1028, 1067 |
| Bst6I | CTCTTC | 4 cut(s) | 62, 178, 222, 495 |
| BstAFI | CTTAAG | 2 cut(s) | 236, 701 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1082 |
| BstC8I | GCNNGC | 2 cut(s) | 216, 589 |
| BstDEI | CTNAG | 7 cut(s) | 24, 111, 312, 726, 765, 811, 909 |
| BstDSI | CCRYGG | 1 cut(s) | 136 |
| BstF5I | GGATG | 1 cut(s) | 70 |
| BstFNI | CGCG | 1 cut(s) | 1000 |
| BstHHI | GCGC | 1 cut(s) | 1002 |
| BstKTI | GATC | 7 cut(s) | 23, 134, 193, 460, 732, 1155, 1159 |
| BstMAI | GTCTC | 3 cut(s) | 638, 1052, 1149 |
| BstMBI | GATC | 7 cut(s) | 20, 131, 190, 457, 729, 1152, 1156 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 241, 308, 827, 1082 |
| BstNI | CCWGG | 3 cut(s) | 599, 989, 1094 |
| BstNSI | RCATGY | 1 cut(s) | 562 |
| BstSCI | CCNGG | 3 cut(s) | 597, 987, 1092 |
| BstUI | CGCG | 1 cut(s) | 1000 |
| BstV1I | GCAGC | 4 cut(s) | 40, 373, 571, 997 |
| BstX2I | RGATCY | 3 cut(s) | 20, 131, 729 |
| BstYI | RGATCY | 3 cut(s) | 20, 131, 729 |
| Bsu15I | ATCGAT | 1 cut(s) | 1155 |
| BsuRI | GGCC | 2 cut(s) | 218, 959 |
| BsuTUI | ATCGAT | 1 cut(s) | 1155 |
| BtgI | CCRYGG | 1 cut(s) | 136 |
| BtrI | CACGTC | 1 cut(s) | 412 |
| BtsCI | GGATG | 1 cut(s) | 70 |
| BtsIMutI | CAGTG | 3 cut(s) | 372, 903, 1024 |
| BveI | ACCTGC | 1 cut(s) | 1037 |
| Cac8I | GCNNGC | 2 cut(s) | 216, 589 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1141 |
| CfoI | GCGC | 1 cut(s) | 1002 |
| Cfr10I | RCCGGY | 1 cut(s) | 528 |
| Cfr13I | GGNCC | 1 cut(s) | 216 |
| ClaI | ATCGAT | 1 cut(s) | 1155 |
| Csp6I | GTAC | 5 cut(s) | 154, 553, 796, 859, 904 |
| CviAII | CATG | 3 cut(s) | 137, 559, 880 |
| CviQI | GTAC | 5 cut(s) | 154, 553, 796, 859, 904 |
| DdeI | CTNAG | 7 cut(s) | 24, 111, 312, 726, 765, 811, 909 |
| DpnI | GATC | 7 cut(s) | 22, 133, 192, 459, 731, 1154, 1158 |
| DpnII | GATC | 7 cut(s) | 20, 131, 190, 457, 729, 1152, 1156 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1065 |
| Eam1104I | CTCTTC | 4 cut(s) | 62, 178, 222, 495 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1065 |
| EarI | CTCTTC | 4 cut(s) | 62, 178, 222, 495 |
| Eco130I | CCWWGG | 1 cut(s) | 136 |
| Eco147I | AGGCCT | 1 cut(s) | 959 |
| Eco31I | GGTCTC | 1 cut(s) | 638 |
| Eco57I | CTGAAG | 1 cut(s) | 396 |
| EcoRII | CCWGG | 3 cut(s) | 597, 987, 1092 |
| EcoT14I | CCWWGG | 1 cut(s) | 136 |
| ErhI | CCWWGG | 1 cut(s) | 136 |
| FaeI | CATG | 3 cut(s) | 140, 562, 883 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 219, 251, 291, 323 |
| FatI | CATG | 3 cut(s) | 136, 558, 879 |
| FauI | CCCGC | 2 cut(s) | 207, 870 |
| FauNDI | CATATG | 2 cut(s) | 625, 640 |
| Fnu4HI | GCNGC | 5 cut(s) | 29, 219, 362, 585, 1011 |
| FokI | GGATG | 1 cut(s) | 57 |
| Fsp4HI | GCNGC | 5 cut(s) | 29, 219, 362, 585, 1011 |
| FspBI | CTAG | 1 cut(s) | 44 |
| GlaI | GCGC | 1 cut(s) | 1001 |
| GluI | GCNGC | 5 cut(s) | 29, 219, 362, 585, 1011 |
| GsaI | CCCAGC | 1 cut(s) | 1017 |
| HaeIII | GGCC | 2 cut(s) | 218, 959 |
| HapII | CCGG | 2 cut(s) | 529, 871 |
| HhaI | GCGC | 1 cut(s) | 1002 |
| Hin1II | CATG | 3 cut(s) | 140, 562, 883 |
| Hin6I | GCGC | 1 cut(s) | 1000 |
| HinP1I | GCGC | 1 cut(s) | 1000 |
| HindIII | AAGCTT | 3 cut(s) | 196, 351, 1019 |
| HinfI | GANTC | 5 cut(s) | 206, 602, 751, 920, 1131 |
| HpaII | CCGG | 2 cut(s) | 529, 871 |
| HphI | GGTGA | 3 cut(s) | 26, 293, 521 |
| Hpy166II | GTNNAC | 2 cut(s) | 564, 904 |
| Hpy188I | TCNGA | 5 cut(s) | 112, 131, 766, 774, 893 |
| Hpy188III | TCNNGA | 8 cut(s) | 74, 83, 91, 296, 331, 667, 1070, 1135 |
| Hpy8I | GTNNAC | 2 cut(s) | 564, 904 |
| Hpy99I | CGWCG | 1 cut(s) | 251 |
| HpyAV | CCTTC | 6 cut(s) | 11, 371, 539, 574, 625, 658 |
| HpyCH4III | ACNGT | 9 cut(s) | 8, 388, 664, 739, 851, 898, 940, 1028, 1067 |
| HpyCH4IV | ACGT | 2 cut(s) | 411, 425 |
| HpyCH4V | TGCA | 8 cut(s) | 260, 266, 558, 722, 835, 1046, 1076, 1085 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 241, 308, 827, 1082 |
| HpyF3I | CTNAG | 7 cut(s) | 24, 111, 312, 726, 765, 811, 909 |
| HpySE526I | ACGT | 2 cut(s) | 411, 425 |
| Hsp92II | CATG | 3 cut(s) | 140, 562, 883 |
| HspAI | GCGC | 1 cut(s) | 1000 |
| Kzo9I | GATC | 7 cut(s) | 20, 131, 190, 457, 729, 1152, 1156 |
| LguI | GCTCTTC | 1 cut(s) | 62 |
| LmnI | GCTCC | 4 cut(s) | 11, 151, 232, 358 |
| Lsp1109I | GCAGC | 4 cut(s) | 40, 373, 571, 997 |
| LweI | GCATC | 4 cut(s) | 253, 684, 709, 1063 |
| MaeI | CTAG | 1 cut(s) | 44 |
| MaeII | ACGT | 2 cut(s) | 411, 425 |
| MaeIII | GTNAC | 4 cut(s) | 426, 509, 851, 934 |
| MalI | GATC | 7 cut(s) | 22, 133, 192, 459, 731, 1154, 1158 |
| MbiI | CCGCTC | 1 cut(s) | 14 |
| MboI | GATC | 7 cut(s) | 20, 131, 190, 457, 729, 1152, 1156 |
| MboII | GAAGA | 8 cut(s) | 49, 165, 239, 265, 281, 512, 535, 760 |
| MflI | RGATCY | 3 cut(s) | 20, 131, 729 |
| MluCI | AATT | 5 cut(s) | 165, 274, 491, 571, 630 |
| MlyI | GAGTC | 1 cut(s) | 215 |
| MmeI | TCCRAC | 1 cut(s) | 376 |
| MnlI | CCTC | 9 cut(s) | 42, 71, 74, 106, 181, 223, 496, 513, 876 |
| MroXI | GAANNNNTTC | 1 cut(s) | 633 |
| MseI | TTAA | 4 cut(s) | 237, 576, 702, 734 |
| MslI | CAYNNNNRTG | 1 cut(s) | 75 |
| MspCI | CTTAAG | 2 cut(s) | 236, 701 |
| MspI | CCGG | 2 cut(s) | 529, 871 |
| MspR9I | CCNGG | 3 cut(s) | 599, 989, 1094 |
| Mva1269I | GAATGC | 1 cut(s) | 1087 |
| MvaI | CCWGG | 3 cut(s) | 599, 989, 1094 |
| MvnI | CGCG | 1 cut(s) | 1000 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 241, 308, 827, 1082 |
| NcoI | CCATGG | 1 cut(s) | 136 |
| NdeI | CATATG | 2 cut(s) | 625, 640 |
| NdeII | GATC | 7 cut(s) | 20, 131, 190, 457, 729, 1152, 1156 |
| NlaIII | CATG | 3 cut(s) | 140, 562, 883 |
| NlaIV | GGNNCC | 1 cut(s) | 147 |
| NmuCI | GTSAC | 2 cut(s) | 509, 934 |
| NspI | RCATGY | 1 cut(s) | 562 |
| PaqCI | CACCTGC | 1 cut(s) | 1037 |
| PceI | AGGCCT | 1 cut(s) | 959 |
| PciSI | GCTCTTC | 1 cut(s) | 62 |
| PctI | GAATGC | 1 cut(s) | 1087 |
| PdmI | GAANNNNTTC | 1 cut(s) | 633 |
| PfeI | GAWTC | 4 cut(s) | 602, 751, 920, 1131 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 142 |
| PfoI | TCCNGGA | 1 cut(s) | 597 |
| PkrI | GCNGC | 5 cut(s) | 30, 220, 363, 586, 1012 |
| PleI | GAGTC | 1 cut(s) | 214 |
| PpsI | GAGTC | 1 cut(s) | 214 |
| Psp6I | CCWGG | 3 cut(s) | 597, 987, 1092 |
| PspFI | CCCAGC | 1 cut(s) | 1013 |
| PspGI | CCWGG | 3 cut(s) | 597, 987, 1092 |
| PspN4I | GGNNCC | 1 cut(s) | 147 |
| PspPI | GGNCC | 1 cut(s) | 216 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1141 |
| PsuI | RGATCY | 3 cut(s) | 20, 131, 729 |
| RsaI | GTAC | 5 cut(s) | 155, 554, 797, 860, 905 |
| RsaNI | GTAC | 5 cut(s) | 154, 553, 796, 859, 904 |
| RseI | CAYNNNNRTG | 1 cut(s) | 75 |
| SapI | GCTCTTC | 1 cut(s) | 62 |
| SaqAI | TTAA | 4 cut(s) | 237, 576, 702, 734 |
| SatI | GCNGC | 5 cut(s) | 29, 219, 362, 585, 1011 |
| Sau3AI | GATC | 7 cut(s) | 20, 131, 190, 457, 729, 1152, 1156 |
| Sau96I | GGNCC | 1 cut(s) | 216 |
| SchI | GAGTC | 1 cut(s) | 215 |
| ScrFI | CCNGG | 3 cut(s) | 599, 989, 1094 |
| SfaNI | GCATC | 4 cut(s) | 253, 684, 709, 1063 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 75 |
| SmlI | CTYRAG | 3 cut(s) | 104, 236, 701 |
| SmoI | CTYRAG | 3 cut(s) | 104, 236, 701 |
| Sse9I | AATT | 5 cut(s) | 165, 274, 491, 571, 630 |
| SseBI | AGGCCT | 1 cut(s) | 959 |
| SsiI | CCGC | 5 cut(s) | 14, 214, 219, 830, 863 |
| SspMI | CTAG | 1 cut(s) | 44 |
| StuI | AGGCCT | 1 cut(s) | 959 |
| StyD4I | CCNGG | 3 cut(s) | 597, 987, 1092 |
| StyI | CCWWGG | 1 cut(s) | 136 |
| TaaI | ACNGT | 9 cut(s) | 8, 388, 664, 739, 851, 898, 940, 1028, 1067 |
| TaiI | ACGT | 2 cut(s) | 414, 428 |
| TaqI | TCGA | 4 cut(s) | 90, 246, 975, 1155 |
| TasI | AATT | 5 cut(s) | 165, 274, 491, 571, 630 |
| TatI | WGTACW | 3 cut(s) | 552, 795, 903 |
| TauI | GCSGC | 1 cut(s) | 221 |
| TfiI | GAWTC | 4 cut(s) | 602, 751, 920, 1131 |
| Tru1I | TTAA | 4 cut(s) | 237, 576, 702, 734 |
| Tru9I | TTAA | 4 cut(s) | 237, 576, 702, 734 |
| TscAI | CASTG | 3 cut(s) | 379, 903, 1031 |
| TseFI | GTSAC | 2 cut(s) | 509, 934 |
| TseI | GCWGC | 4 cut(s) | 28, 361, 584, 1010 |
| Tsp45I | GTSAC | 2 cut(s) | 509, 934 |
| TspDTI | ATGAA | 8 cut(s) | 115, 240, 316, 558, 640, 642, 970, 994 |
| TspRI | CASTG | 3 cut(s) | 379, 903, 1031 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 142 |
| Vha464I | CTTAAG | 2 cut(s) | 236, 701 |
| XapI | RAATTY | 3 cut(s) | 274, 571, 630 |
| XceI | RCATGY | 1 cut(s) | 562 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 595 |
| XmnI | GAANNNNTTC | 1 cut(s) | 633 |
| XspI | CTAG | 1 cut(s) | 44 |