Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003491

Physical Location & Seq

Genomic Coordinates Forward (+)

16896153 .. 16898933

Gene Structure 2781 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G35600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1260 bp

ATGGGTGCTTGTATTTCGTTCTTTTCTTCTTCCTCTCCTTCCAAAACAGGTCTCCATAGTCATGCCACAACGAACAACCACAGCAATGGAACAGAGTTCTCGTCAACCACCGGCGCGACAACAAACAGCAGCGTCGGACAACAGAGCCAATTCTCCGATATTTCCACTGGGATTATAAGTGATTCCGGTAAACTACTGGAATCGCCAAATCTCAAAGTCTATAACTTTCTGGATCTAAAGACGGCGACGAAGAATTTCAAACCGGATTCGATGTTGGGTCAAGGAGGTTTCGGGAAAGTATACAGAGGTTGGGTCGATGCCACGACTCTTGCTCCTTCCAGAGTCGGTTCTGGTATGATCGTTGCCATCAAGAGATTGAATTCTGAGAGTGTTCAAGGATTTGCAGAGTGGCGTTCAGAAGTTAACTTCTTGGGAATGCTTTCGCACCGAAATCTGGTGAAGTTATTGGGATACTGTCGTGAAGACAAAGAGCTTCTCCTTGTCTACGAGTTCATGCCCAAAGGAAGTCTTGAGAGTCATCTTTTTAGACGAAACGATCCTTTTCCTTGGGATTTAAGGATCAAGATTGTGATTGGTGCAGCTCGTGGCCTTGCGTTTCTACACAGCTTACAAAGAGAAGTCATCTATAGAGACTTCAAAGCTTCCAATATACTTCTTGATTCGAACTATGACGCAAAGCTTTCAGATTTCGGACTAGCAAAGCTAGGACCAGCAGATGAGAAGTCACACGTCACGACTAGGATCATGGGCACATATGGTTATGCTGCTCCTGAATATATGGCAACAGGCCATTTATACGTTAAGAGTGACGTATTCGCCTTTGGTGTGGTTTTACTAGAAATAATGACCGGACTGACGGCGCACAACACAAAACGGCCCAGAGGACAAGAGAGTCTTGTCGACTGGTTAAGACCAGAACTCTCAAACAAACACAGAGTGAAACAAATAATGGACAAAGGAATCAAAGGTCAATACACAACCAAGGTCGCGACCGAAATGGCACGCATTACACTCTCTTGTATCGAGCCAGACCCAAAAAACCGACCACACATGAAGGAAGTAGTCGAAGTCCTCGAACACATCCAAGGGCTTAATGTTGTCCCTAACCGTTCTTCCACTAAACAGGCCGTTGCTAACTCTTCACGTTCTTCGCCACATCACTATCGCTATAAAGCTGGCGCACTTGGGGCTGAACGCAAGAGAGCAACGCCTGGACGGTTTGGATCAGTAGAAAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009909 GO:0009910 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048519 GO:0048580 GO:0048581 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051239 GO:0051241 GO:0051716 GO:0060089 GO:0060860 GO:0060862 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564 GO:2000026 GO:2000241 GO:2000242

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

419

Amino Acids

46.34

Weight (kDa)

9.58

Isoelectric Point (pI)

36.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PK_Tyr_Ser-Thr	PF07714	89 - 365	5.3e-50	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	89 - 363	1.8e-43	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003491)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35600 AT4G35600
fragaria_vesca	FvH4_1g10470 FvH4_1g10470 FvH4_1g10470 FvH4_1g14300 FvH4_1g14300 FvH4_1g15410 FvH4_1g15410 FvH4_1g15410 FvH4_1g15410
malus_domestica	MD02G1117900.v1.1 MD15G1232600.v1.1
prunus_persica	Prupe.7G181500_v2.0.a1
pyrus_communis	pycom02g09150 pycom15g20700
rosa_chinensis	RchiOBHm_Chr2g0097331 RchiOBHm_Chr2g0102961
rosa_laevigata	RLG00000009020 RLG00000016718 RLG00000017194 RLG00000017335
rosa_multiflora	Rmu_sc0000388.1_g000037 Rmu_sc0001060.1_g000013 Rmu_sc0035636.1_g000001
rosa_roxburghii	Rroxscaffold_2G00144760 Rroxscaffold_5G00347840
rosa_rugosa	Rorug02G0065900 Rorug02G0065900 Rorug02G0110700
rosa_samantha	Rh2CG117400 Rh2CG165600 Rh2DG116600
rosa_wichuraiana	Rw2G008810 Rw2G012430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	176
AasI	GACNNNNNNGTC	1 cut(s)	912
AccI	GTMKAC	3 cut(s)	300, 504, 921
AccII	CGCG	2 cut(s)	116, 1010
AclWI	GGATC	5 cut(s)	240, 551, 587, 770, 1252
AcsI	RAATTY	2 cut(s)	253, 379
AdeI	CACNNNGTG	1 cut(s)	958
AfiI	CCNNNNNNNGG	1 cut(s)	454
AflIII	ACRYGT	1 cut(s)	748
AgsI	TTSAA	4 cut(s)	259, 379, 395, 658
AjiI	CACGTC	1 cut(s)	751
AjnI	CCWGG	1 cut(s)	1231
AluBI	AGCT	7 cut(s)	493, 602, 627, 662, 700, 724, 1196
AluI	AGCT	7 cut(s)	493, 602, 627, 662, 700, 724, 1196
Alw26I	GTCTC	2 cut(s)	56, 645
AlwI	GGATC	5 cut(s)	240, 551, 587, 770, 1252
AoxI	GGCC	4 cut(s)	607, 808, 896, 1146
ApeKI	GCWGC	3 cut(s)	129, 599, 785
ApoI	RAATTY	2 cut(s)	253, 379
Asp700I	GAANNNNTTC	2 cut(s)	254, 439
AspLEI	GCGC	3 cut(s)	116, 883, 1202
AspS9I	GGNCC	2 cut(s)	728, 897
AsuHPI	GGTGA	1 cut(s)	469
AsuII	TTCGAA	1 cut(s)	683
AvaII	GGWCC	1 cut(s)	728
BaeGI	GKGCMC	1 cut(s)	773
BaeI	ACNNNNGTAYC	2 cut(s)	463, 496
BauI	CACGAG	1 cut(s)	603
BbsI	GAAGAC	1 cut(s)	489
BbvI	GCAGC	3 cut(s)	141, 611, 772
BccI	CCATC	1 cut(s)	374
BceAI	ACGGC	4 cut(s)	258, 894, 911, 1133
BciT130I	CCWGG	1 cut(s)	1233
BciVI	GTATCC	1 cut(s)	464
BcoDI	GTCTC	2 cut(s)	56, 645
BfaI	CTAG	4 cut(s)	716, 725, 759, 857
BfmI	CTRYAG	1 cut(s)	646
BfuI	GTATCC	1 cut(s)	464
BisI	GCNGC	3 cut(s)	130, 600, 786
BlsI	GCNGC	3 cut(s)	131, 601, 787
Bme1390I	CCNGG	1 cut(s)	1233
Bme18I	GGWCC	1 cut(s)	728
BmgBI	CACGTC	1 cut(s)	751
BmgT120I	GGNCC	2 cut(s)	728, 897
BmrFI	CCNGG	1 cut(s)	1233
BmrI	ACTGGG	1 cut(s)	177
BmsI	GCATC	1 cut(s)	307
BmuI	ACTGGG	1 cut(s)	177
BpiI	GAAGAC	1 cut(s)	489
Bpu14I	TTCGAA	1 cut(s)	683
BpuEI	CTTGAG	1 cut(s)	551
BsaI	GGTCTC	1 cut(s)	56
BsaJI	CCNNGG	3 cut(s)	566, 1002, 1105
BsaWI	WCCGGW	3 cut(s)	185, 262, 869
BsaXI	ACNNNNNCTCC	2 cut(s)	316, 346
Bsc4I	CCNNNNNNNGG	1 cut(s)	454
Bse118I	RCCGGY	1 cut(s)	110
Bse1I	ACTGG	3 cut(s)	172, 201, 929
Bse3DI	GCAATG	1 cut(s)	91
BseBI	CCWGG	1 cut(s)	1233
BseDI	CCNNGG	3 cut(s)	566, 1002, 1105
BseGI	GGATG	1 cut(s)	1101
BseLI	CCNNNNNNNGG	1 cut(s)	454
BseMI	GCAATG	1 cut(s)	91
BseMII	CTCAG	1 cut(s)	375
BseNI	ACTGG	3 cut(s)	172, 201, 929
BseSI	GKGCMC	1 cut(s)	773
BseXI	GCAGC	3 cut(s)	141, 611, 772
BsgI	GTGCAG	1 cut(s)	618
Bsh1236I	CGCG	2 cut(s)	116, 1010
Bsh1285I	CGRYCG	1 cut(s)	1014
BshFI	GGCC	4 cut(s)	609, 810, 898, 1148
BsiEI	CGRYCG	1 cut(s)	1014
BsiSI	CCGG	4 cut(s)	111, 186, 263, 870
BslFI	GGGAC	1 cut(s)	1106
BslI	CCNNNNNNNGG	1 cut(s)	454
BsmAI	GTCTC	2 cut(s)	56, 645
BsmFI	GGGAC	1 cut(s)	1106
BsmI	GAATGC	1 cut(s)	441
BsnI	GGCC	4 cut(s)	609, 810, 898, 1148
Bso31I	GGTCTC	1 cut(s)	56
Bsp119I	TTCGAA	1 cut(s)	683
Bsp1286I	GDGCHC	1 cut(s)	773
Bsp143I	GATC	6 cut(s)	232, 357, 556, 579, 762, 1244
Bsp68I	TCGCGA	1 cut(s)	1010
BspANI	GGCC	4 cut(s)	609, 810, 898, 1148
BspCNI	CTCAG	1 cut(s)	376
BspFNI	CGCG	2 cut(s)	116, 1010
BspPI	GGATC	5 cut(s)	240, 551, 587, 770, 1252
BspT104I	TTCGAA	1 cut(s)	683
BspTNI	GGTCTC	1 cut(s)	56
BsrDI	GCAATG	1 cut(s)	91
BsrFI	RCCGGY	1 cut(s)	110
BsrI	ACTGG	3 cut(s)	172, 201, 929
BssAI	RCCGGY	1 cut(s)	110
BssECI	CCNNGG	3 cut(s)	566, 1002, 1105
BssMI	GATC	6 cut(s)	232, 357, 556, 579, 762, 1244
BssNAI	GTATAC	1 cut(s)	301
BssSI	CACGAG	1 cut(s)	603
BssT1I	CCWWGG	3 cut(s)	566, 1002, 1105
Bst1107I	GTATAC	1 cut(s)	301
Bst2BI	CACGAG	1 cut(s)	603
Bst2UI	CCWGG	1 cut(s)	1233
Bst4CI	ACNGT	3 cut(s)	476, 1130, 1239
Bst6I	CTCTTC	1 cut(s)	1165
BstBI	TTCGAA	1 cut(s)	683
BstC8I	GCNNGC	2 cut(s)	1024, 1198
BstDEI	CTNAG	1 cut(s)	384
BstF5I	GGATG	1 cut(s)	1101
BstFNI	CGCG	2 cut(s)	116, 1010
BstHHI	GCGC	3 cut(s)	116, 883, 1202
BstKTI	GATC	6 cut(s)	235, 360, 559, 582, 765, 1247
BstMAI	GTCTC	2 cut(s)	56, 645
BstMBI	GATC	6 cut(s)	232, 357, 556, 579, 762, 1244
BstMCI	CGRYCG	1 cut(s)	1014
BstMWI	GCNNNNNNNGC	1 cut(s)	1208
BstNI	CCWGG	1 cut(s)	1233
BstSCI	CCNGG	1 cut(s)	1231
BstSFI	CTRYAG	1 cut(s)	646
BstSLI	GKGCMC	1 cut(s)	773
BstUI	CGCG	2 cut(s)	116, 1010
BstV1I	GCAGC	3 cut(s)	141, 611, 772
BstV2I	GAAGAC	1 cut(s)	489
BstX2I	RGATCY	1 cut(s)	232
BstXI	CCANNNNNNTGG	1 cut(s)	86
BstYI	RGATCY	1 cut(s)	232
BstZ17I	GTATAC	1 cut(s)	301
BsuI	GTATCC	1 cut(s)	464
BsuRI	GGCC	4 cut(s)	609, 810, 898, 1148
BtrI	CACGTC	1 cut(s)	751
BtsCI	GGATG	1 cut(s)	1101
BtsIMutI	CAGTG	1 cut(s)	165
BtuMI	TCGCGA	1 cut(s)	1010
Cac8I	GCNNGC	2 cut(s)	1024, 1198
CfoI	GCGC	3 cut(s)	116, 883, 1202
Cfr10I	RCCGGY	1 cut(s)	110
Cfr13I	GGNCC	2 cut(s)	728, 897
CseI	GACGC	2 cut(s)	121, 701
CspCI	CAANNNNNGTGG	2 cut(s)	310, 345
CviAII	CATG	4 cut(s)	62, 514, 766, 1072
DdeI	CTNAG	1 cut(s)	384
DpnI	GATC	6 cut(s)	234, 359, 558, 581, 764, 1246
DpnII	GATC	6 cut(s)	232, 357, 556, 579, 762, 1244
DraIII	CACNNNGTG	1 cut(s)	958
DrdI	GACNNNNNNGTC	1 cut(s)	912
DseDI	GACNNNNNNGTC	1 cut(s)	912
Eam1104I	CTCTTC	1 cut(s)	1165
EarI	CTCTTC	1 cut(s)	1165
Eco130I	CCWWGG	3 cut(s)	566, 1002, 1105
Eco31I	GGTCTC	1 cut(s)	56
Eco47I	GGWCC	1 cut(s)	728
EcoRI	GAATTC	1 cut(s)	379
EcoRII	CCWGG	1 cut(s)	1231
EcoT14I	CCWWGG	3 cut(s)	566, 1002, 1105
ErhI	CCWWGG	3 cut(s)	566, 1002, 1105
FaeI	CATG	4 cut(s)	65, 517, 769, 1075
FalI	AAGNNNNNCTT	4 cut(s)	513, 545, 900, 932
FaqI	GGGAC	1 cut(s)	1106
FatI	CATG	4 cut(s)	61, 513, 765, 1071
FauNDI	CATATG	1 cut(s)	775
FblI	GTMKAC	3 cut(s)	300, 504, 921
Fnu4HI	GCNGC	3 cut(s)	130, 600, 786
FokI	GGATG	1 cut(s)	1088
Fsp4HI	GCNGC	3 cut(s)	130, 600, 786
FspBI	CTAG	4 cut(s)	716, 725, 759, 857
GlaI	GCGC	3 cut(s)	115, 882, 1201
GluI	GCNGC	3 cut(s)	130, 600, 786
HaeIII	GGCC	4 cut(s)	609, 810, 898, 1148
HapII	CCGG	4 cut(s)	111, 186, 263, 870
HgaI	GACGC	2 cut(s)	121, 701
HhaI	GCGC	3 cut(s)	116, 883, 1202
Hin1II	CATG	4 cut(s)	65, 517, 769, 1075
Hin6I	GCGC	3 cut(s)	114, 881, 1200
HinP1I	GCGC	3 cut(s)	114, 881, 1200
HincII	GTYRAC	3 cut(s)	105, 424, 922
HindII	GTYRAC	3 cut(s)	105, 424, 922
HindIII	AAGCTT	2 cut(s)	660, 698
HinfI	GANTC	9 cut(s)	182, 200, 266, 325, 342, 535, 680, 913, 981
HpaI	GTTAAC	1 cut(s)	424
HpaII	CCGG	4 cut(s)	111, 186, 263, 870
HphI	GGTGA	1 cut(s)	469
Hpy166II	GTNNAC	6 cut(s)	105, 191, 301, 424, 505, 922
Hpy188I	TCNGA	6 cut(s)	137, 157, 385, 418, 706, 713
Hpy8I	GTNNAC	6 cut(s)	105, 191, 301, 424, 505, 922
Hpy99I	CGWCG	2 cut(s)	137, 250
HpyAV	CCTTC	3 cut(s)	48, 345, 1069
HpyCH4III	ACNGT	3 cut(s)	476, 1130, 1239
HpyCH4IV	ACGT	4 cut(s)	750, 819, 831, 1165
HpyCH4V	TGCA	2 cut(s)	404, 599
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1208
HpyF3I	CTNAG	1 cut(s)	384
HpySE526I	ACGT	4 cut(s)	750, 819, 831, 1165
Hsp92II	CATG	4 cut(s)	65, 517, 769, 1075
HspAI	GCGC	3 cut(s)	114, 881, 1200
KspAI	GTTAAC	1 cut(s)	424
Kzo9I	GATC	6 cut(s)	232, 357, 556, 579, 762, 1244
LmnI	GCTCC	2 cut(s)	337, 793
Lsp1109I	GCAGC	3 cut(s)	141, 611, 772
LweI	GCATC	1 cut(s)	307
MaeI	CTAG	4 cut(s)	716, 725, 759, 857
MaeII	ACGT	4 cut(s)	750, 819, 831, 1165
MaeIII	GTNAC	3 cut(s)	744, 751, 827
MalI	GATC	6 cut(s)	234, 359, 558, 581, 764, 1246
MboI	GATC	6 cut(s)	232, 357, 556, 579, 762, 1244
MboII	GAAGA	7 cut(s)	18, 21, 262, 494, 1125, 1152, 1161
MflI	RGATCY	1 cut(s)	232
MhlI	GDGCHC	1 cut(s)	773
MluCI	AATT	3 cut(s)	149, 253, 379
MlyI	GAGTC	4 cut(s)	319, 351, 544, 922
MmeI	TCCRAC	1 cut(s)	115
MnlI	CCTC	5 cut(s)	43, 278, 299, 896, 1103
MroXI	GAANNNNTTC	2 cut(s)	254, 439
MseI	TTAA	5 cut(s)	423, 575, 822, 929, 1113
MslI	CAYNNNNRTG	2 cut(s)	60, 84
MspI	CCGG	4 cut(s)	111, 186, 263, 870
MspR9I	CCNGG	1 cut(s)	1233
Mva1269I	GAATGC	1 cut(s)	441
MvaI	CCWGG	1 cut(s)	1233
MvnI	CGCG	2 cut(s)	116, 1010
MwoI	GCNNNNNNNGC	1 cut(s)	1208
NdeI	CATATG	1 cut(s)	775
NdeII	GATC	6 cut(s)	232, 357, 556, 579, 762, 1244
NlaIII	CATG	4 cut(s)	65, 517, 769, 1075
NmuCI	GTSAC	3 cut(s)	744, 751, 827
NruI	TCGCGA	1 cut(s)	1010
NspV	TTCGAA	1 cut(s)	683
PcsI	WCGNNNNNNNCGW	1 cut(s)	1092
PctI	GAATGC	1 cut(s)	441
PdmI	GAANNNNTTC	2 cut(s)	254, 439
PfeI	GAWTC	5 cut(s)	182, 200, 266, 680, 981
PkrI	GCNGC	3 cut(s)	131, 601, 787
PleI	GAGTC	4 cut(s)	319, 350, 543, 921
PpsI	GAGTC	4 cut(s)	319, 350, 543, 921
PsiI	TTATAA	1 cut(s)	176
Psp6I	CCWGG	1 cut(s)	1231
PspGI	CCWGG	1 cut(s)	1231
PspPI	GGNCC	2 cut(s)	728, 897
PsuI	RGATCY	1 cut(s)	232
RruI	TCGCGA	1 cut(s)	1010
RseI	CAYNNNNRTG	2 cut(s)	60, 84
SalI	GTCGAC	1 cut(s)	920
SaqAI	TTAA	5 cut(s)	423, 575, 822, 929, 1113
SatI	GCNGC	3 cut(s)	130, 600, 786
Sau3AI	GATC	6 cut(s)	232, 357, 556, 579, 762, 1244
Sau96I	GGNCC	2 cut(s)	728, 897
SchI	GAGTC	4 cut(s)	319, 351, 544, 922
ScrFI	CCNGG	1 cut(s)	1233
SduI	GDGCHC	1 cut(s)	773
SfaNI	GCATC	1 cut(s)	307
SfcI	CTRYAG	1 cut(s)	646
SfuI	TTCGAA	1 cut(s)	683
SgrAI	CRCCGGYG	1 cut(s)	110
SinI	GGWCC	1 cut(s)	728
SmiMI	CAYNNNNRTG	2 cut(s)	60, 84
SmlI	CTYRAG	1 cut(s)	530
SmoI	CTYRAG	1 cut(s)	530
Sse9I	AATT	3 cut(s)	149, 253, 379
SspMI	CTAG	4 cut(s)	716, 725, 759, 857
StyD4I	CCNGG	1 cut(s)	1231
StyI	CCWWGG	3 cut(s)	566, 1002, 1105
TaaI	ACNGT	3 cut(s)	476, 1130, 1239
TaiI	ACGT	4 cut(s)	753, 822, 834, 1168
TaqI	TCGA	7 cut(s)	269, 315, 683, 921, 1044, 1086, 1095
TaqII	GACCGA	1 cut(s)	1028
TasI	AATT	3 cut(s)	149, 253, 379
TfiI	GAWTC	5 cut(s)	182, 200, 266, 680, 981
Tru1I	TTAA	5 cut(s)	423, 575, 822, 929, 1113
Tru9I	TTAA	5 cut(s)	423, 575, 822, 929, 1113
TscAI	CASTG	1 cut(s)	172
TseFI	GTSAC	3 cut(s)	744, 751, 827
TseI	GCWGC	3 cut(s)	129, 599, 785
Tsp45I	GTSAC	3 cut(s)	744, 751, 827
TspDTI	ATGAA	2 cut(s)	502, 1088
TspRI	CASTG	1 cut(s)	172
VpaK11BI	GGWCC	1 cut(s)	728
XapI	RAATTY	2 cut(s)	253, 379
XmiI	GTMKAC	3 cut(s)	300, 504, 921
XmnI	GAANNNNTTC	2 cut(s)	254, 439
XspI	CTAG	4 cut(s)	716, 725, 759, 857

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.