FvH4_1g10470
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Forward (+)
5724808 .. 5727991
3184 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g10470.t3

Sequence Viewer

Length: 1257 bp
ATGGGTATCTGCTTTGGATCTCCTGCTAGTCAACCCAACACCATCACCCCATCAACTCCAGGGACAAGTGAAAATCAAAGCAGGTATAGACTTTCACAGACAAGCAGCAGCACAGGAAGAAGTCAATTCTCTCATTTTTCAGAAGCAACAACATCAACACTAAGCCCAAGATATGATGATCAGGAGTCAACAGATGGTGAAATTTTGGAGACATCAAACTTGAGAGTCTTCAGTTTTGCAGATATGAAATCTGCTACTAAGAATTTCAAGTCAGATCAAATTCTGGGTGAGGGAGGATTTGGTCGAGTTTTCAAAGGTTGGGTGGATGAGAAAACTCTTCAACCCTGTAAGGCTGGCACTGGAATGATGATTGCTGTCAAGAAATTAAACCCAGAAAGTGTGCAAGGCTTTCAAGAATGGCAGTCAGAAGTGAACTTTCTAGGTAGGCTTTCTCATCCCAACCTTGTAAAGCTATTGGGATACTGTTGGGAAGACAAGGAGCTACTCCTTGTTTATGAGTTCATGCCGAAAGGTAGCTTGGAGAATCATCTTTTCAGAAGGAATCCTAACATTGAACCGCTATCTTGGGACATCAGAATCAGAATAGCTATTGGAGCAGCTCGAGGCCTGGCGTTCTTGCACAGTTCAGAAAAGCATATTATATATAGAGATTTCAAAGCCTCAAATATATTGCTTGATGGGAATTATAATGCAAAAATCTCAGATTTTGGTTTGGCGAAATTGGGACCAACTGGTGGAGACTCACATGTGTCAACTAGAATTATGGGGACATATGGTTATGCTGCTCCAGAATACATTGCAACAGGTCATTTGTATGTGAAGAGCGATGTGTATGGTTTCGGTGTTGTGCTGCTTGAGATTTTGACAGGGTTACGAGCACTTGATACAAAACGCCCTAAGGAGCAACTTAATCTGGTAGACTGGGCTAAACCACTTCTCCCTCATAAAAGAAAGTTGAAAACCATTATGGATGCGAGGATGGAGGGCCAATATTCCTTCAAGGCAGCTTTACAGACAGCAAATATTACTCTAAAATGCCTAGCACCGGATCCTAAAAGCCGACCTTCCATGAAAGAAGTCTTGGAAGAACTGGAACAGGTTCAGGCAATCAGTGAAAAGCCAAAGCCAGCGTTACTAAATACCTTTAGGCAACCTACTTCTAGTCCTCGATCATATGTACTTCAAGAACCTCCTCGTCGTTCCCCGGTTCCCTCCAGGTACCAAGCCACTAGATGA

Protein Analysis

419

Amino Acids

46.72

Weight (kDa)

9.25

Isoelectric Point (pI)

46.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 90 - 360 5.2e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 91 - 362 1.9e-41 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 708
Acc36I ACCTGC 1 cut(s) 72
Acc65I GGTACC 1 cut(s) 1239
AccB1I GGYRCC 1 cut(s) 1239
AccB7I CCANNNNNTGG 1 cut(s) 755
AccI GTMKAC 1 cut(s) 939
AciI CCGC 1 cut(s) 578
AclWI GGATC 3 cut(s) 25, 1064, 1077
AcsI RAATTY 3 cut(s) 201, 262, 279
AcuI CTGAAG 1 cut(s) 214
AfaI GTAC 2 cut(s) 1200, 1241
AfiI CCNNNNNNNGG 2 cut(s) 755, 1066
AflIII ACRYGT 1 cut(s) 766
AgsI TTSAA 9 cut(s) 268, 313, 341, 413, 575, 676, 979, 1021, 1205
AjnI CCWGG 3 cut(s) 58, 627, 1235
AjuI GAANNNNNNNTTGG 4 cut(s) 521, 553, 1085, 1117
AluBI AGCT 6 cut(s) 472, 502, 537, 608, 620, 1028
AluI AGCT 6 cut(s) 472, 502, 537, 608, 620, 1028
Alw21I GWGCWC 1 cut(s) 901
Alw26I GTCTC 2 cut(s) 203, 753
AlwI GGATC 3 cut(s) 25, 1064, 1077
Ama87I CYCGRG 1 cut(s) 621
AoxI GGCC 2 cut(s) 625, 1006
ApeKI GCWGC 6 cut(s) 105, 108, 617, 803, 871, 1025
ApoI RAATTY 3 cut(s) 201, 262, 279
Asp700I GAANNNNTTC 1 cut(s) 1119
Asp718I GGTACC 1 cut(s) 1239
AspS9I GGNCC 2 cut(s) 746, 1006
AsuC2I CCSGG 1 cut(s) 1226
AsuHPI GGTGA 3 cut(s) 37, 209, 299
AvaI CYCGRG 1 cut(s) 621
AvaII GGWCC 1 cut(s) 746
AxyI CCTNAGG 1 cut(s) 918
BamHI GGATCC 1 cut(s) 1069
BanI GGYRCC 1 cut(s) 1239
BbsI GAAGAC 2 cut(s) 220, 498
Bbv12I GWGCWC 1 cut(s) 901
BbvI GCAGC 6 cut(s) 117, 120, 629, 790, 858, 1037
BccI CCATC 5 cut(s) 50, 58, 188, 692, 994
BciT130I CCWGG 3 cut(s) 60, 629, 1237
BciVI GTATCC 1 cut(s) 473
BclI TGATCA 1 cut(s) 178
BcnI CCSGG 1 cut(s) 1226
BcoDI GTCTC 2 cut(s) 203, 753
BfaI CTAG 6 cut(s) 27, 440, 777, 1061, 1182, 1251
BfuAI ACCTGC 1 cut(s) 72
BfuI GTATCC 1 cut(s) 473
BisI GCNGC 6 cut(s) 106, 109, 618, 804, 872, 1026
BlsI GCNGC 6 cut(s) 107, 110, 619, 805, 873, 1027
Bme1390I CCNGG 4 cut(s) 60, 629, 1226, 1237
Bme18I GGWCC 1 cut(s) 746
BmeT110I CYCGRG 1 cut(s) 621
BmgT120I GGNCC 2 cut(s) 746, 1006
BmiI GGNNCC 4 cut(s) 747, 1071, 1230, 1241
BmrFI CCNGG 4 cut(s) 60, 629, 1226, 1237
BmrI ACTGGG 1 cut(s) 952
BmsI GCATC 1 cut(s) 982
BmuI ACTGGG 1 cut(s) 952
BpiI GAAGAC 2 cut(s) 220, 498
BpmI CTGGAG 3 cut(s) 42, 792, 1219
BpuEI CTTGAG 2 cut(s) 241, 896
BpuMI CCSGG 1 cut(s) 1226
BsaJI CCNNGG 2 cut(s) 59, 1224
BsaWI WCCGGW 1 cut(s) 1066
BsaXI ACNNNNNCTCC 2 cut(s) 942, 972
Bsc4I CCNNNNNNNGG 2 cut(s) 755, 1066
Bse1I ACTGG 4 cut(s) 364, 757, 947, 1116
Bse21I CCTNAGG 1 cut(s) 918
Bse3DI GCAATG 1 cut(s) 816
BseBI CCWGG 3 cut(s) 60, 629, 1237
BseDI CCNNGG 2 cut(s) 59, 1224
BseGI GGATG 4 cut(s) 331, 454, 997, 1005
BseLI CCNNNNNNNGG 2 cut(s) 755, 1066
BseMI GCAATG 1 cut(s) 816
BseMII CTCAG 1 cut(s) 735
BseNI ACTGG 4 cut(s) 364, 757, 947, 1116
BseRI GAGGAG 1 cut(s) 1203
BseXI GCAGC 6 cut(s) 117, 120, 629, 790, 858, 1037
BshFI GGCC 2 cut(s) 627, 1008
BshNI GGYRCC 1 cut(s) 1239
BsiHKAI GWGCWC 1 cut(s) 901
BsiHKCI CYCGRG 1 cut(s) 621
BsiSI CCGG 2 cut(s) 1067, 1226
BslFI GGGAC 4 cut(s) 76, 602, 759, 802
BslI CCNNNNNNNGG 2 cut(s) 755, 1066
BsmAI GTCTC 2 cut(s) 203, 753
BsmFI GGGAC 4 cut(s) 76, 602, 759, 802
BsnI GGCC 2 cut(s) 627, 1008
BsoBI CYCGRG 1 cut(s) 621
Bsp1286I GDGCHC 1 cut(s) 901
Bsp143I GATC 5 cut(s) 17, 178, 274, 1069, 1190
BspACI CCGC 1 cut(s) 578
BspANI GGCC 2 cut(s) 627, 1008
BspCNI CTCAG 1 cut(s) 734
BspLI GGNNCC 4 cut(s) 747, 1071, 1230, 1241
BspMI ACCTGC 1 cut(s) 72
BspPI GGATC 3 cut(s) 25, 1064, 1077
BspQI GCTCTTC 1 cut(s) 836
BspT107I GGYRCC 1 cut(s) 1239
BsrDI GCAATG 1 cut(s) 816
BsrI ACTGG 4 cut(s) 364, 757, 947, 1116
BssECI CCNNGG 2 cut(s) 59, 1224
BssMI GATC 5 cut(s) 17, 178, 274, 1069, 1190
Bst2UI CCWGG 3 cut(s) 60, 629, 1237
Bst4CI ACNGT 2 cut(s) 485, 644
Bst6I CTCTTC 2 cut(s) 342, 836
BstC8I GCNNGC 2 cut(s) 355, 1149
BstDEI CTNAG 4 cut(s) 161, 258, 721, 918
BstF5I GGATG 4 cut(s) 331, 454, 997, 1005
BstKTI GATC 5 cut(s) 20, 181, 277, 1072, 1193
BstMAI GTCTC 2 cut(s) 203, 753
BstMBI GATC 5 cut(s) 17, 178, 274, 1069, 1190
BstMWI GCNNNNNNNGC 1 cut(s) 614
BstNI CCWGG 3 cut(s) 60, 629, 1237
BstNSI RCATGY 1 cut(s) 770
BstSCI CCNGG 4 cut(s) 58, 627, 1224, 1235
BstV1I GCAGC 6 cut(s) 117, 120, 629, 790, 858, 1037
BstV2I GAAGAC 2 cut(s) 220, 498
BstX2I RGATCY 2 cut(s) 17, 1069
BstYI RGATCY 2 cut(s) 17, 1069
Bsu36I CCTNAGG 1 cut(s) 918
BsuI GTATCC 1 cut(s) 473
BsuRI GGCC 2 cut(s) 627, 1008
BtgZI GCGATG 1 cut(s) 861
BtsCI GGATG 4 cut(s) 331, 454, 997, 1005
BtsIMutI CAGTG 2 cut(s) 357, 1138
BveI ACCTGC 1 cut(s) 72
Cac8I GCNNGC 2 cut(s) 355, 1149
Cfr13I GGNCC 2 cut(s) 746, 1006
Csp6I GTAC 2 cut(s) 1199, 1240
CviAII CATG 3 cut(s) 523, 767, 1090
CviQI GTAC 2 cut(s) 1199, 1240
DdeI CTNAG 4 cut(s) 161, 258, 721, 918
DpnI GATC 5 cut(s) 19, 180, 276, 1071, 1192
DpnII GATC 5 cut(s) 17, 178, 274, 1069, 1190
Eam1104I CTCTTC 2 cut(s) 342, 836
EarI CTCTTC 2 cut(s) 342, 836
Eco147I AGGCCT 1 cut(s) 627
Eco47I GGWCC 1 cut(s) 746
Eco57I CTGAAG 1 cut(s) 214
Eco81I CCTNAGG 1 cut(s) 918
Eco88I CYCGRG 1 cut(s) 621
EcoRII CCWGG 3 cut(s) 58, 627, 1235
FaeI CATG 3 cut(s) 526, 770, 1093
FalI AAGNNNNNCTT 2 cut(s) 1069, 1101
FaqI GGGAC 4 cut(s) 76, 602, 759, 802
FatI CATG 3 cut(s) 522, 766, 1089
FauNDI CATATG 2 cut(s) 793, 1195
FbaI TGATCA 1 cut(s) 178
FblI GTMKAC 1 cut(s) 939
Fnu4HI GCNGC 6 cut(s) 106, 109, 618, 804, 872, 1026
FokI GGATG 4 cut(s) 338, 441, 1004, 1012
Fsp4HI GCNGC 6 cut(s) 106, 109, 618, 804, 872, 1026
FspBI CTAG 6 cut(s) 27, 440, 777, 1061, 1182, 1251
GluI GCNGC 6 cut(s) 106, 109, 618, 804, 872, 1026
GsuI CTGGAG 3 cut(s) 42, 792, 1219
HaeIII GGCC 2 cut(s) 627, 1008
HapII CCGG 2 cut(s) 1067, 1226
Hin1II CATG 3 cut(s) 526, 770, 1093
HincII GTYRAC 3 cut(s) 32, 189, 774
HindII GTYRAC 3 cut(s) 32, 189, 774
HinfI GANTC 6 cut(s) 185, 225, 544, 562, 597, 761
HpaII CCGG 2 cut(s) 1067, 1226
HphI GGTGA 3 cut(s) 37, 209, 299
Hpy166II GTNNAC 5 cut(s) 32, 189, 433, 774, 940
Hpy188I TCNGA 8 cut(s) 142, 274, 427, 557, 596, 602, 649, 724
Hpy188III TCNNGA 5 cut(s) 182, 379, 413, 809, 1205
Hpy8I GTNNAC 5 cut(s) 32, 189, 433, 774, 940
Hpy99I CGWCG 1 cut(s) 1221
HpyAV CCTTC 3 cut(s) 552, 1027, 1095
HpyCH4III ACNGT 2 cut(s) 485, 644
HpyCH4V TGCA 5 cut(s) 239, 403, 640, 713, 821
HpyF10VI GCNNNNNNNGC 1 cut(s) 614
HpyF3I CTNAG 4 cut(s) 161, 258, 721, 918
Hsp92II CATG 3 cut(s) 526, 770, 1093
KpnI GGTACC 1 cut(s) 1243
Ksp22I TGATCA 1 cut(s) 178
Kzo9I GATC 5 cut(s) 17, 178, 274, 1069, 1190
LguI GCTCTTC 1 cut(s) 836
LmnI GCTCC 4 cut(s) 499, 614, 811, 922
Lsp1109I GCAGC 6 cut(s) 117, 120, 629, 790, 858, 1037
LweI GCATC 1 cut(s) 982
MaeI CTAG 6 cut(s) 27, 440, 777, 1061, 1182, 1251
MaeIII GTNAC 2 cut(s) 891, 1152
MalI GATC 5 cut(s) 19, 180, 276, 1071, 1192
MboI GATC 5 cut(s) 17, 178, 274, 1069, 1190
MboII GAAGA 6 cut(s) 129, 220, 329, 503, 853, 1118
MflI RGATCY 2 cut(s) 17, 1069
MhlI GDGCHC 1 cut(s) 901
MluCI AATT 8 cut(s) 125, 201, 262, 279, 383, 703, 740, 780
MlyI GAGTC 3 cut(s) 194, 234, 755
MroXI GAANNNNTTC 1 cut(s) 1119
MseI TTAA 2 cut(s) 386, 930
MslI CAYNNNNRTG 2 cut(s) 362, 834
MspI CCGG 2 cut(s) 1067, 1226
MspR9I CCNGG 4 cut(s) 60, 629, 1226, 1237
MvaI CCWGG 3 cut(s) 60, 629, 1237
MwoI GCNNNNNNNGC 1 cut(s) 614
NciI CCSGG 1 cut(s) 1226
NdeI CATATG 2 cut(s) 793, 1195
NdeII GATC 5 cut(s) 17, 178, 274, 1069, 1190
NlaIII CATG 3 cut(s) 526, 770, 1093
NlaIV GGNNCC 4 cut(s) 747, 1071, 1230, 1241
NspI RCATGY 1 cut(s) 770
PaeR7I CTCGAG 1 cut(s) 621
PceI AGGCCT 1 cut(s) 627
PciI ACATGT 1 cut(s) 766
PciSI GCTCTTC 1 cut(s) 836
PdmI GAANNNNTTC 1 cut(s) 1119
PfeI GAWTC 3 cut(s) 544, 562, 597
PflMI CCANNNNNTGG 1 cut(s) 755
PkrI GCNGC 6 cut(s) 107, 110, 619, 805, 873, 1027
PleI GAGTC 3 cut(s) 193, 233, 755
PpsI GAGTC 3 cut(s) 193, 233, 755
PscI ACATGT 1 cut(s) 766
PsiI TTATAA 1 cut(s) 708
Psp6I CCWGG 3 cut(s) 58, 627, 1235
PspGI CCWGG 3 cut(s) 58, 627, 1235
PspN4I GGNNCC 4 cut(s) 747, 1071, 1230, 1241
PspPI GGNCC 2 cut(s) 746, 1006
PspXI VCTCGAGB 1 cut(s) 621
PsuI RGATCY 2 cut(s) 17, 1069
RsaI GTAC 2 cut(s) 1200, 1241
RsaNI GTAC 2 cut(s) 1199, 1240
RseI CAYNNNNRTG 2 cut(s) 362, 834
SapI GCTCTTC 1 cut(s) 836
SaqAI TTAA 2 cut(s) 386, 930
SatI GCNGC 6 cut(s) 106, 109, 618, 804, 872, 1026
Sau3AI GATC 5 cut(s) 17, 178, 274, 1069, 1190
Sau96I GGNCC 2 cut(s) 746, 1006
SchI GAGTC 3 cut(s) 194, 234, 755
ScrFI CCNGG 4 cut(s) 60, 629, 1226, 1237
SduI GDGCHC 1 cut(s) 901
SfaNI GCATC 1 cut(s) 982
Sfr274I CTCGAG 1 cut(s) 621
SinI GGWCC 1 cut(s) 746
SlaI CTCGAG 1 cut(s) 621
SmiMI CAYNNNNRTG 2 cut(s) 362, 834
SmlI CTYRAG 3 cut(s) 220, 621, 875
SmoI CTYRAG 3 cut(s) 220, 621, 875
Sse9I AATT 8 cut(s) 125, 201, 262, 279, 383, 703, 740, 780
SseBI AGGCCT 1 cut(s) 627
SsiI CCGC 1 cut(s) 578
SspI AATATT 2 cut(s) 1013, 1045
SspMI CTAG 6 cut(s) 27, 440, 777, 1061, 1182, 1251
StuI AGGCCT 1 cut(s) 627
StyD4I CCNGG 4 cut(s) 58, 627, 1224, 1235
TaaI ACNGT 2 cut(s) 485, 644
TaqI TCGA 3 cut(s) 304, 622, 1189
TasI AATT 8 cut(s) 125, 201, 262, 279, 383, 703, 740, 780
TatI WGTACW 1 cut(s) 1198
TfiI GAWTC 3 cut(s) 544, 562, 597
Tru1I TTAA 2 cut(s) 386, 930
Tru9I TTAA 2 cut(s) 386, 930
TscAI CASTG 2 cut(s) 364, 1138
TseI GCWGC 6 cut(s) 105, 108, 617, 803, 871, 1025
TspDTI ATGAA 3 cut(s) 260, 511, 1106
TspRI CASTG 2 cut(s) 364, 1138
Van91I CCANNNNNTGG 1 cut(s) 755
VpaK11BI GGWCC 1 cut(s) 746
XapI RAATTY 3 cut(s) 201, 262, 279
XceI RCATGY 1 cut(s) 770
XhoI CTCGAG 1 cut(s) 621
XmiI GTMKAC 1 cut(s) 939
XmnI GAANNNNTTC 1 cut(s) 1119
XspI CTAG 6 cut(s) 27, 440, 777, 1061, 1182, 1251
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.