Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0002374

Physical Location & Seq

Genomic Coordinates Forward (+)

5153231 .. 5157161

Gene Structure 3931 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0065900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1500 bp

ATGGCTAGTGGGTTCAGGCTTGTCTTTGCCCTCTCACAGCTGCTTGTACTTTTGGATCTTTGCCAAGGAAGCATTGTGGGAATTTGCTATGGAAGAAATGCTGATGACCTTCCTACACCTGACAAAGCTGCTCAGCTTGTGCAGCTTCACAACATCAAATATGTTCGGATTTATGACTCTAACATACAGGTCCTCAAGGCCTTTGCAAACACTGGTGTTGAACTTATGATTGGGGTTCCGAATTCAGACTTGTTGCCATTTTCTCAGTTCCAAACTAATGCAGATACCTGGCTTAAGAACAGCATTCTGCCTTACTATCCAGCTACAAAGATCACATACATAACAGTTGGAGCTGAAGTAACTGAGACCACCGGTAATGTCTCTGCCCTTGTAGTACCTGCCATGAGAAATGTCCTCACAGCACTGAAGAAAGCTGGTCTTAATAAGAAGATTAAAGTATCAAGTACACATTCCCTCGGTGTTCTGTCTAGATCATTCCCTCCCTCTGCAGGGGCGTTTAGTAGCAGCTATGCATCTTTCCTGAAGCCCATGTTGGAATTTCTTGCCGAAAACCAGTCACCCTTCATGATTGATATATATCCATACTATGCTTACAGAGATTCCCCAAGCAATGTCACTCTTGACTACGCTCTATTTCAGGCATCCTCGGAAGTTATTGATCCAAACACCGGTTTGCTGTACACTAACATGTTTGATGCTCAGATTGATGCTATATATTATGCACTGATGGCTCTGAATTTCAGAACAATCAATATTATGGTCACTGAGACAGGCTGGCCGTCGAAAGGATCACCAAAAGAGACAGCTGCAACTCCTGACAATGCCCAAACTTACAATACAAATCTGATTCGCCATGTCATTAACAATACTGGCACACCTGCGAAGCCTGGACAGAAGGTGGATACCTACCTCTTTTCTTTGTTCAATGAAAATAGGAAGCCTGGGTTGGAATCTGAGAGGAATTGGGGGCTATTTTATCCTGACCAGACAAGCGTCTACAACCTGGATTTCACCGGAAAAAATGCTATGGATATGAACACAGATGCTAATGTTACCAGTTCAAATGGAACAACAACTTGGTGCATTGCTTCAAGTAAAGCTTCTGAAGCGGACTTGCAGAATGCTTTAGACTGGGCTTGTGGTTCTGGGAATGTGGACTGTACACCGATTCAGCCTAGCCAGCCTTGTTTTGAGCCTGATAATACAGTGTCTCATGCATCTTACGCTTTCAATGTTTATTACCAGCAAAATGGGGCTACAGATATTGCTTGCAGTTTTGGAGGGTCAGGGATTAAAGTCGATAAGAACCCAAGCTATGACAGCTGCATCTATATGACTGCAGGGAGCAACAAAACTATAGCTAGTAGTAATACAACGGCAATATCTTCCACTTCCTCCTCTGCCACGGTGAAGGGAGTTCCAGCATGGATTTTCACTTGCTTTCTTGTGACTTTCATATCATTTCTTTTTATAAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009909 GO:0009910 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048519 GO:0048580 GO:0048581 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051239 GO:0051241 GO:0051716 GO:0060089 GO:0060860 GO:0060862 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564 GO:2000026 GO:2000241 GO:2000242

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

499

Amino Acids

54.33

Weight (kDa)

5.21

Isoelectric Point (pI)

33.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_17	PF00332	26 - 344	2e-93	Glycosyl hydrolases family 17
X8	PF07983	366 - 437	1.5e-21	X8 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002374)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17570
fragaria_vesca	FvH4_1g10471 FvH4_1g10471 FvH4_1g10480 FvH4_2g21620 FvH4_7g34231
malus_domestica	MD02G1118000.v1.1 MD02G1118200.v1.1 MD05G1029700.v1.1 MD15G1232700.v1.1
prunus_persica	Prupe.1G067500_v2.0.a1 Prupe.7G181400_v2.0.a1 Prupe.7G181400_v2.0.a1 Prupe.7G181400_v2.0.a1 Prupe.7G181400_v2.0.a1 Prupe.8G224900_v2.0.a1 Prupe.8G224900_v2.0.a1
pyrus_communis	pycom02g09160 pycom05g02100
rosa_chinensis	RchiOBHm_Chr2g0097351 RchiOBHm_Chr6g0288291
rosa_laevigata	RLG00000012417 RLG00000016719 RLG00000017370
rosa_multiflora	Rmu_sc0001038.1_g000003
rosa_roxburghii	Rroxscaffold_2G00144750 Rroxscaffold_7G00180240
rosa_rugosa	Rorug02G0065900 Rorug06G0195300
rosa_samantha	Rh2AG112700 Rh2AG174400 Rh2BG115400 Rh2BG182100 Rh2CG117500 Rh2DG116700 Rh2DG180900 Rh6AG306500 Rh6BG312100 Rh6CG320100 Rh6DG305400
rosa_wichuraiana	Rw2G008820 Rw6G026510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1493
AarI	CACCTGC	1 cut(s)	907
Acc36I	ACCTGC	2 cut(s)	406, 907
AccI	GTMKAC	1 cut(s)	1017
AciI	CCGC	1 cut(s)	1130
AclWI	GGATC	3 cut(s)	63, 674, 817
AcoI	YGGCCR	1 cut(s)	797
AcsI	RAATTY	4 cut(s)	81, 241, 557, 757
AcuI	CTGAAG	4 cut(s)	375, 446, 563, 1146
AfaI	GTAC	5 cut(s)	48, 396, 466, 701, 1183
AfiI	CCNNNNNNNGG	4 cut(s)	509, 510, 689, 806
AflII	CTTAAG	1 cut(s)	293
AflIII	ACRYGT	1 cut(s)	708
AgeI	ACCGGT	2 cut(s)	371, 689
AgsI	TTSAA	5 cut(s)	221, 946, 1083, 1113, 1252
AjnI	CCWGG	4 cut(s)	287, 907, 961, 1023
AjuI	GAANNNNNNNTTGG	8 cut(s)	213, 245, 536, 568, 950, 982, 1081, 1113
Alw26I	GTCTC	5 cut(s)	359, 385, 782, 815, 1236
AlwI	GGATC	3 cut(s)	63, 674, 817
AoxI	GGCC	2 cut(s)	198, 797
ApeKI	GCWGC	6 cut(s)	40, 128, 142, 525, 827, 1344
ApoI	RAATTY	4 cut(s)	81, 241, 557, 757
AsiGI	ACCGGT	2 cut(s)	371, 689
AspS9I	GGNCC	1 cut(s)	190
AsuHPI	GGTGA	4 cut(s)	570, 804, 1024, 1441
AvaII	GGWCC	1 cut(s)	190
BbvI	GCAGC	6 cut(s)	27, 115, 154, 537, 814, 1331
BccI	CCATC	1 cut(s)	742
BceAI	ACGGC	2 cut(s)	784, 1413
BciT130I	CCWGG	4 cut(s)	289, 909, 963, 1025
BciVI	GTATCC	1 cut(s)	916
BcoDI	GTCTC	5 cut(s)	359, 385, 782, 815, 1236
BfaI	CTAG	4 cut(s)	6, 489, 1197, 1383
BfmI	CTRYAG	4 cut(s)	507, 1278, 1359, 1377
BfrI	CTTAAG	1 cut(s)	293
BfuAI	ACCTGC	2 cut(s)	406, 907
BfuI	GTATCC	1 cut(s)	916
BisI	GCNGC	6 cut(s)	41, 129, 143, 526, 828, 1345
BlpI	GCTNAGC	1 cut(s)	132
BlsI	GCNGC	6 cut(s)	42, 130, 144, 527, 829, 1346
Bme1390I	CCNGG	4 cut(s)	289, 909, 963, 1025
Bme18I	GGWCC	1 cut(s)	190
BmgT120I	GGNCC	1 cut(s)	190
BmiI	GGNNCC	1 cut(s)	237
BmrFI	CCNGG	4 cut(s)	289, 909, 963, 1025
BmrI	ACTGGG	1 cut(s)	1162
BmsI	GCATC	7 cut(s)	542, 671, 706, 718, 1054, 1247, 1356
BmuI	ACTGGG	1 cut(s)	1162
BoxI	GACNNNNGTC	1 cut(s)	1013
Bpu1102I	GCTNAGC	1 cut(s)	132
BpuEI	CTTGAG	1 cut(s)	179
BsaBI	GATNNNNATC	1 cut(s)	597
BsaI	GGTCTC	1 cut(s)	359
BsaJI	CCNNGG	5 cut(s)	64, 475, 666, 962, 1425
BsaWI	WCCGGW	3 cut(s)	371, 689, 1034
BsaXI	ACNNNNNCTCC	2 cut(s)	342, 372
Bsc4I	CCNNNNNNNGG	4 cut(s)	509, 510, 689, 806
Bse118I	RCCGGY	2 cut(s)	371, 689
Bse1I	ACTGG	5 cut(s)	217, 574, 895, 1077, 1157
Bse3DI	GCAATG	2 cut(s)	637, 1104
Bse8I	GATNNNNATC	1 cut(s)	597
BseBI	CCWGG	4 cut(s)	289, 909, 963, 1025
BseDI	CCNNGG	5 cut(s)	64, 475, 666, 962, 1425
BseGI	GGATG	1 cut(s)	662
BseJI	GATNNNNATC	1 cut(s)	597
BseLI	CCNNNNNNNGG	4 cut(s)	509, 510, 689, 806
BseMI	GCAATG	2 cut(s)	637, 1104
BseMII	CTCAG	6 cut(s)	146, 278, 354, 734, 777, 966
BseNI	ACTGG	5 cut(s)	217, 574, 895, 1077, 1157
BseRI	GAGGAG	1 cut(s)	1408
BseXI	GCAGC	6 cut(s)	27, 115, 154, 537, 814, 1331
BsgI	GTGCAG	1 cut(s)	161
BshFI	GGCC	2 cut(s)	200, 799
BshTI	ACCGGT	2 cut(s)	371, 689
BsiSI	CCGG	3 cut(s)	372, 690, 1035
BslI	CCNNNNNNNGG	4 cut(s)	509, 510, 689, 806
BsmAI	GTCTC	5 cut(s)	359, 385, 782, 815, 1236
BsmI	GAATGC	2 cut(s)	303, 1147
BsnI	GGCC	2 cut(s)	200, 799
Bso31I	GGTCTC	1 cut(s)	359
Bsp1407I	TGTACA	2 cut(s)	699, 1181
Bsp143I	GATC	5 cut(s)	55, 330, 491, 679, 809
Bsp1720I	GCTNAGC	1 cut(s)	132
BspACI	CCGC	1 cut(s)	1130
BspANI	GGCC	2 cut(s)	200, 799
BspCNI	CTCAG	6 cut(s)	145, 277, 355, 733, 778, 967
BspHI	TCATGA	1 cut(s)	585
BspLI	GGNNCC	1 cut(s)	237
BspMAI	CTGCAG	2 cut(s)	511, 1363
BspMI	ACCTGC	2 cut(s)	406, 907
BspPI	GGATC	3 cut(s)	63, 674, 817
BspTI	CTTAAG	1 cut(s)	293
BspTNI	GGTCTC	1 cut(s)	359
BsrDI	GCAATG	2 cut(s)	637, 1104
BsrFI	RCCGGY	2 cut(s)	371, 689
BsrGI	TGTACA	2 cut(s)	699, 1181
BsrI	ACTGG	5 cut(s)	217, 574, 895, 1077, 1157
BssAI	RCCGGY	2 cut(s)	371, 689
BssECI	CCNNGG	5 cut(s)	64, 475, 666, 962, 1425
BssMI	GATC	5 cut(s)	55, 330, 491, 679, 809
BssT1I	CCWWGG	1 cut(s)	64
Bst2UI	CCWGG	4 cut(s)	289, 909, 963, 1025
Bst4CI	ACNGT	4 cut(s)	346, 1181, 1228, 1429
BstAFI	CTTAAG	1 cut(s)	293
BstAUI	TGTACA	2 cut(s)	699, 1181
BstC8I	GCNNGC	3 cut(s)	797, 1202, 1291
BstDEI	CTNAG	6 cut(s)	132, 264, 363, 720, 786, 975
BstDSI	CCRYGG	1 cut(s)	1425
BstF5I	GGATG	1 cut(s)	662
BstKTI	GATC	5 cut(s)	58, 333, 494, 682, 812
BstMAI	GTCTC	5 cut(s)	359, 385, 782, 815, 1236
BstMBI	GATC	5 cut(s)	55, 330, 491, 679, 809
BstMWI	GCNNNNNNNGC	7 cut(s)	69, 142, 749, 1127, 1201, 1244, 1341
BstNI	CCWGG	4 cut(s)	289, 909, 963, 1025
BstNSI	RCATGY	1 cut(s)	712
BstPAI	GACNNNNGTC	1 cut(s)	1013
BstSCI	CCNGG	4 cut(s)	287, 907, 961, 1023
BstSFI	CTRYAG	4 cut(s)	507, 1278, 1359, 1377
BstV1I	GCAGC	6 cut(s)	27, 115, 154, 537, 814, 1331
BstX2I	RGATCY	1 cut(s)	55
BstXI	CCANNNNNNTGG	1 cut(s)	1271
BstYI	RGATCY	1 cut(s)	55
BsuI	GTATCC	1 cut(s)	916
BsuRI	GGCC	2 cut(s)	200, 799
BtgI	CCRYGG	1 cut(s)	1425
BtsCI	GGATG	1 cut(s)	662
BtsIMutI	CAGTG	5 cut(s)	210, 422, 743, 783, 1233
BveI	ACCTGC	2 cut(s)	406, 907
Cac8I	GCNNGC	3 cut(s)	797, 1202, 1291
CciI	TCATGA	1 cut(s)	585
Cfr10I	RCCGGY	2 cut(s)	371, 689
Cfr13I	GGNCC	1 cut(s)	190
CseI	GACGC	1 cut(s)	1003
Csp6I	GTAC	5 cut(s)	47, 395, 465, 700, 1182
CspAI	ACCGGT	2 cut(s)	371, 689
CviAII	CATG	7 cut(s)	403, 550, 586, 709, 875, 1235, 1446
CviQI	GTAC	5 cut(s)	47, 395, 465, 700, 1182
DdeI	CTNAG	6 cut(s)	132, 264, 363, 720, 786, 975
DpnI	GATC	5 cut(s)	57, 332, 493, 681, 811
DpnII	GATC	5 cut(s)	55, 330, 491, 679, 809
EaeI	YGGCCR	1 cut(s)	797
Eco130I	CCWWGG	1 cut(s)	64
Eco147I	AGGCCT	1 cut(s)	200
Eco31I	GGTCTC	1 cut(s)	359
Eco47I	GGWCC	1 cut(s)	190
Eco57I	CTGAAG	4 cut(s)	375, 446, 563, 1146
EcoO109I	RGGNCCY	1 cut(s)	190
EcoRI	GAATTC	1 cut(s)	241
EcoRII	CCWGG	4 cut(s)	287, 907, 961, 1023
EcoT14I	CCWWGG	1 cut(s)	64
EcoT22I	ATGCAT	2 cut(s)	535, 1240
ErhI	CCWWGG	1 cut(s)	64
FaeI	CATG	7 cut(s)	406, 553, 589, 712, 878, 1238, 1449
FalI	AAGNNNNNCTT	4 cut(s)	423, 455, 1105, 1137
FatI	CATG	7 cut(s)	402, 549, 585, 708, 874, 1234, 1445
FblI	GTMKAC	1 cut(s)	1017
Fnu4HI	GCNGC	6 cut(s)	41, 129, 143, 526, 828, 1345
FokI	GGATG	1 cut(s)	649
Fsp4HI	GCNGC	6 cut(s)	41, 129, 143, 526, 828, 1345
FspBI	CTAG	4 cut(s)	6, 489, 1197, 1383
GluI	GCNGC	6 cut(s)	41, 129, 143, 526, 828, 1345
HaeIII	GGCC	2 cut(s)	200, 799
HapII	CCGG	3 cut(s)	372, 690, 1035
HgaI	GACGC	1 cut(s)	1003
Hin1II	CATG	7 cut(s)	406, 553, 589, 712, 878, 1238, 1449
HindIII	AAGCTT	1 cut(s)	1119
HinfI	GANTC	5 cut(s)	176, 620, 868, 971, 1189
HpaII	CCGG	3 cut(s)	372, 690, 1035
HphI	GGTGA	4 cut(s)	570, 804, 1024, 1441
Hpy166II	GTNNAC	5 cut(s)	467, 702, 1018, 1177, 1184
Hpy188III	TCNNGA	6 cut(s)	489, 541, 586, 641, 836, 1001
Hpy8I	GTNNAC	5 cut(s)	467, 702, 1018, 1177, 1184
Hpy99I	CGWCG	1 cut(s)	805
HpyAV	CCTTC	4 cut(s)	119, 592, 910, 1426
HpyCH4III	ACNGT	4 cut(s)	346, 1181, 1228, 1429
HpyF10VI	GCNNNNNNNGC	7 cut(s)	69, 142, 749, 1127, 1201, 1244, 1341
HpyF3I	CTNAG	6 cut(s)	132, 264, 363, 720, 786, 975
Hsp92II	CATG	7 cut(s)	406, 553, 589, 712, 878, 1238, 1449
Kzo9I	GATC	5 cut(s)	55, 330, 491, 679, 809
LmnI	GCTCC	2 cut(s)	350, 1365
Lsp1109I	GCAGC	6 cut(s)	27, 115, 154, 537, 814, 1331
LweI	GCATC	7 cut(s)	542, 671, 706, 718, 1054, 1247, 1356
MaeI	CTAG	4 cut(s)	6, 489, 1197, 1383
MaeIII	GTNAC	6 cut(s)	358, 576, 634, 781, 1072, 1468
MalI	GATC	5 cut(s)	57, 332, 493, 681, 811
MboI	GATC	5 cut(s)	55, 330, 491, 679, 809
MboII	GAAGA	4 cut(s)	105, 439, 460, 1398
MflI	RGATCY	1 cut(s)	55
MluCI	AATT	5 cut(s)	81, 241, 557, 757, 982
MlyI	GAGTC	1 cut(s)	170
MmeI	TCCRAC	3 cut(s)	328, 534, 948
Mph1103I	ATGCAT	2 cut(s)	535, 1240
MseI	TTAA	5 cut(s)	294, 441, 453, 882, 1314
MslI	CAYNNNNRTG	2 cut(s)	707, 1352
MspA1I	CMGCKG	3 cut(s)	40, 827, 1344
MspCI	CTTAAG	1 cut(s)	293
MspI	CCGG	3 cut(s)	372, 690, 1035
MspR9I	CCNGG	4 cut(s)	289, 909, 963, 1025
Mva1269I	GAATGC	2 cut(s)	303, 1147
MvaI	CCWGG	4 cut(s)	289, 909, 963, 1025
MwoI	GCNNNNNNNGC	7 cut(s)	69, 142, 749, 1127, 1201, 1244, 1341
NdeII	GATC	5 cut(s)	55, 330, 491, 679, 809
NlaIII	CATG	7 cut(s)	406, 553, 589, 712, 878, 1238, 1449
NlaIV	GGNNCC	1 cut(s)	237
NmuCI	GTSAC	4 cut(s)	576, 634, 781, 1468
NsiI	ATGCAT	2 cut(s)	535, 1240
NspI	RCATGY	1 cut(s)	712
PagI	TCATGA	1 cut(s)	585
PaqCI	CACCTGC	1 cut(s)	907
PceI	AGGCCT	1 cut(s)	200
PciI	ACATGT	1 cut(s)	708
PctI	GAATGC	2 cut(s)	303, 1147
PfeI	GAWTC	4 cut(s)	620, 868, 971, 1189
PinAI	ACCGGT	2 cut(s)	371, 689
PkrI	GCNGC	6 cut(s)	42, 130, 144, 527, 829, 1346
PleI	GAGTC	1 cut(s)	170
PpsI	GAGTC	1 cut(s)	170
PpuMI	RGGWCCY	1 cut(s)	190
PscI	ACATGT	1 cut(s)	708
PshAI	GACNNNNGTC	1 cut(s)	1013
PsiI	TTATAA	1 cut(s)	1493
Psp5II	RGGWCCY	1 cut(s)	190
Psp6I	CCWGG	4 cut(s)	287, 907, 961, 1023
PspGI	CCWGG	4 cut(s)	287, 907, 961, 1023
PspN4I	GGNNCC	1 cut(s)	237
PspPI	GGNCC	1 cut(s)	190
PspPPI	RGGWCCY	1 cut(s)	190
PstI	CTGCAG	2 cut(s)	511, 1363
PsuI	RGATCY	1 cut(s)	55
PvuII	CAGCTG	3 cut(s)	40, 827, 1344
RsaI	GTAC	5 cut(s)	48, 396, 466, 701, 1183
RsaNI	GTAC	5 cut(s)	47, 395, 465, 700, 1182
RseI	CAYNNNNRTG	2 cut(s)	707, 1352
SaqAI	TTAA	5 cut(s)	294, 441, 453, 882, 1314
SatI	GCNGC	6 cut(s)	41, 129, 143, 526, 828, 1345
Sau3AI	GATC	5 cut(s)	55, 330, 491, 679, 809
Sau96I	GGNCC	1 cut(s)	190
SchI	GAGTC	1 cut(s)	170
ScrFI	CCNGG	4 cut(s)	289, 909, 963, 1025
SfaNI	GCATC	7 cut(s)	542, 671, 706, 718, 1054, 1247, 1356
SfcI	CTRYAG	4 cut(s)	507, 1278, 1359, 1377
SinI	GGWCC	1 cut(s)	190
SmiMI	CAYNNNNRTG	2 cut(s)	707, 1352
SmlI	CTYRAG	2 cut(s)	194, 293
SmoI	CTYRAG	2 cut(s)	194, 293
Sse9I	AATT	5 cut(s)	81, 241, 557, 757, 982
SseBI	AGGCCT	1 cut(s)	200
SsiI	CCGC	1 cut(s)	1130
SspI	AATATT	1 cut(s)	775
SspMI	CTAG	4 cut(s)	6, 489, 1197, 1383
StuI	AGGCCT	1 cut(s)	200
StyD4I	CCNGG	4 cut(s)	287, 907, 961, 1023
StyI	CCWWGG	1 cut(s)	64
TaaI	ACNGT	4 cut(s)	346, 1181, 1228, 1429
TaqI	TCGA	2 cut(s)	803, 1320
TasI	AATT	5 cut(s)	81, 241, 557, 757, 982
TatI	WGTACW	4 cut(s)	46, 464, 699, 1181
TfiI	GAWTC	4 cut(s)	620, 868, 971, 1189
Tru1I	TTAA	5 cut(s)	294, 441, 453, 882, 1314
Tru9I	TTAA	5 cut(s)	294, 441, 453, 882, 1314
TscAI	CASTG	5 cut(s)	217, 429, 750, 790, 1233
TseFI	GTSAC	4 cut(s)	576, 634, 781, 1468
TseI	GCWGC	6 cut(s)	40, 128, 142, 525, 827, 1344
Tsp45I	GTSAC	4 cut(s)	576, 634, 781, 1468
TspDTI	ATGAA	4 cut(s)	574, 963, 1070, 1465
TspRI	CASTG	5 cut(s)	217, 429, 750, 790, 1233
Vha464I	CTTAAG	1 cut(s)	293
VpaK11BI	GGWCC	1 cut(s)	190
XapI	RAATTY	4 cut(s)	81, 241, 557, 757
XbaI	TCTAGA	1 cut(s)	488
XceI	RCATGY	1 cut(s)	712
XmiI	GTMKAC	1 cut(s)	1017
XspI	CTAG	4 cut(s)	6, 489, 1197, 1383
Zsp2I	ATGCAT	2 cut(s)	535, 1240

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.