Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0002374

Physical Location & Seq

Genomic Coordinates Reverse (-)

17717870 .. 17720838

Gene Structure 2969 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G181400.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1089 bp

ATGGAGAAAAGCGTTATTGGTGCAAGCCAAAGGTTGGGGGGTTTAGGTACTTTCTTGAGGAAATGTATGTTTAGCGTTGTATCTGTGGGCCCCATTCCTGAGCACATTGCCTTCATCATGGATGGGAACCGAAGGTATGCAAAGAGGAGGAACTTACCTGTAGCGGAAGGTCATAAAGCCGGATATTTGGCTCTCATGTCCATTCTGAGGTACTGCTATGAATTGGGAGTCAAGTATGTAACAGTTTATGCCTTCAGCATTGATAATTTCAAGCGACGGCCAGAGGAGGTGCAAACTCTAATGGATCTGTTGCAGGAGAAGATTGAGGTGCTGCTTGAGAAAGAAAGTATTGTTAACCAATATGGTATCAGAGTATATTTTATTGGTAACTTGAAACTTCTGAATGAGCCTGTCAGGGATGCTGCTGAAAAGGCAATGAAGGCTACTGCCAACAACTCCAAGGCTGTGCTTTTGATCTGTGTGGCCTATACTTCATGTGATGAGATTGTTCATGCTGTACAAGAATCCTGCAATGAGAAAGGGAATGAAATTCAGGCATTGAATGGAACCAAGGTTAGCAATGGTGTGACTTATGGAGTTGAAAGGGGAGAGAAGATTAATGGTGTGATGGAGTGTGATGTTCATAAATCATGCAACGGCAGTTTGGATGGAGAAGCAGCATTAGATACCAGTAAACCTTGCAGTGAAAGATATGAGGCGGATGAGAAGGAAAATACAACTGTTAATCATGTTGAAAAAGATAAAGGGGGTGAAGTTGCAAGTAGAATTTGCAATGGTCTGATTGAAGATGTTCAAGAGAGTGAGAAGTTGCCACACAAAATTCCTAATGTAAAGCTGGTCGATGTTGAGAAGCACCTGTACATGGCAGTGGCACCTGATCCAGACATTATGATTCGAACTTCGGGTGAGACCCGCCTGAGCAATTTCCTACTCTGGCAAACTTCTAACTGCCCATTGTACTCCCCTGCTGCTCTGTGGCCAGAGTTGGGCTTATGGCACCTGGTTTGGGCAGTTCTGAATTTCCAGAGAAACCACTACTATTTGGAGAAGAAAAGGAAGCAAATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002094 GO:0003674 GO:0003824 GO:0004659 GO:0006066 GO:0006629 GO:0006720 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009987 GO:0016093 GO:0016094 GO:0016740 GO:0016765 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0046165 GO:0071704 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00900 ko01110 map00900 map01110

Pfam Domains

Protein Families

Prenyltransf

Protein Analysis

363

Amino Acids

40.74

Weight (kDa)

6.53

Isoelectric Point (pI)

40.89

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002374)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17570
fragaria_vesca	FvH4_1g10471 FvH4_1g10471 FvH4_1g10480 FvH4_2g21620 FvH4_7g34231
malus_domestica	MD02G1118000.v1.1 MD02G1118200.v1.1 MD05G1029700.v1.1 MD15G1232700.v1.1
prunus_persica	Prupe.1G067500_v2.0.a1 Prupe.7G181400_v2.0.a1 Prupe.7G181400_v2.0.a1 Prupe.7G181400_v2.0.a1 Prupe.7G181400_v2.0.a1 Prupe.8G224900_v2.0.a1 Prupe.8G224900_v2.0.a1
pyrus_communis	pycom02g09160 pycom05g02100
rosa_chinensis	RchiOBHm_Chr2g0097351 RchiOBHm_Chr6g0288291
rosa_laevigata	RLG00000012417 RLG00000016719 RLG00000017370
rosa_multiflora	Rmu_sc0001038.1_g000003
rosa_roxburghii	Rroxscaffold_2G00144750 Rroxscaffold_7G00180240
rosa_rugosa	Rorug02G0065900 Rorug06G0195300
rosa_samantha	Rh2AG112700 Rh2AG174400 Rh2BG115400 Rh2BG182100 Rh2CG117500 Rh2DG116700 Rh2DG180900 Rh6AG306500 Rh6BG312100 Rh6CG320100 Rh6DG305400
rosa_wichuraiana	Rw2G008820 Rw6G026510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	892, 1017
AccB7I	CCANNNNNTGG	1 cut(s)	34
AciI	CCGC	3 cut(s)	164, 719, 934
AclWI	GGATC	2 cut(s)	312, 893
AcoI	YGGCCR	2 cut(s)	278, 998
AcsI	RAATTY	4 cut(s)	549, 786, 840, 1039
AcuI	CTGAAG	1 cut(s)	238
AfaI	GTAC	5 cut(s)	49, 212, 519, 881, 980
AfiI	CCNNNNNNNGG	5 cut(s)	34, 207, 883, 1007, 1027
AgsI	TTSAA	7 cut(s)	271, 394, 562, 602, 755, 806, 815
AjnI	CCWGG	1 cut(s)	1020
AluBI	AGCT	1 cut(s)	856
AluI	AGCT	1 cut(s)	856
Alw21I	GWGCWC	1 cut(s)	105
Alw26I	GTCTC	1 cut(s)	923
AlwI	GGATC	2 cut(s)	312, 893
AoxI	GGCC	4 cut(s)	88, 278, 483, 998
ApaI	GGGCCC	1 cut(s)	92
ApeKI	GCWGC	4 cut(s)	331, 422, 677, 989
ApoI	RAATTY	4 cut(s)	549, 786, 840, 1039
AseI	ATTAAT	1 cut(s)	618
Asp700I	GAANNNNTTC	1 cut(s)	810
AspS9I	GGNCC	2 cut(s)	88, 89
AsuHPI	GGTGA	2 cut(s)	782, 938
AsuII	TTCGAA	1 cut(s)	916
BaeGI	GKGCMC	1 cut(s)	92
BalI	TGGCCA	1 cut(s)	1000
BanI	GGYRCC	2 cut(s)	892, 1017
BanII	GRGCYC	1 cut(s)	92
BarI	GAAGNNNNNNTAC	2 cut(s)	863, 895
Bbv12I	GWGCWC	1 cut(s)	105
BbvI	GCAGC	4 cut(s)	318, 409, 689, 976
BccI	CCATC	3 cut(s)	116, 622, 662
BceAI	ACGGC	2 cut(s)	293, 673
BciT130I	CCWGG	1 cut(s)	1022
BcoDI	GTCTC	1 cut(s)	923
BfmI	CTRYAG	1 cut(s)	159
BisI	GCNGC	4 cut(s)	332, 423, 678, 990
BlsI	GCNGC	4 cut(s)	333, 424, 679, 991
Bme1390I	CCNGG	1 cut(s)	1022
BmgT120I	GGNCC	2 cut(s)	88, 89
BmiI	GGNNCC	6 cut(s)	90, 91, 128, 568, 894, 1019
BmrFI	CCNGG	1 cut(s)	1022
BmsI	GCATC	1 cut(s)	409
Bpu10I	CCTNAGC	2 cut(s)	99, 938
Bpu14I	TTCGAA	1 cut(s)	916
BpuEI	CTTGAG	2 cut(s)	76, 356
BsaI	GGTCTC	1 cut(s)	923
BsaJI	CCNNGG	2 cut(s)	459, 570
Bsc4I	CCNNNNNNNGG	5 cut(s)	34, 207, 883, 1007, 1027
Bse1I	ACTGG	1 cut(s)	690
Bse3DI	GCAATG	5 cut(s)	105, 441, 538, 586, 799
BseBI	CCWGG	1 cut(s)	1022
BseDI	CCNNGG	2 cut(s)	459, 570
BseGI	GGATG	4 cut(s)	127, 424, 673, 727
BseLI	CCNNNNNNNGG	5 cut(s)	34, 207, 883, 1007, 1027
BseMI	GCAATG	5 cut(s)	105, 441, 538, 586, 799
BseMII	CTCAG	3 cut(s)	90, 197, 929
BseNI	ACTGG	1 cut(s)	690
BseRI	GAGGAG	2 cut(s)	160, 299
BseSI	GKGCMC	1 cut(s)	92
BseXI	GCAGC	4 cut(s)	318, 409, 689, 976
BshFI	GGCC	4 cut(s)	90, 280, 485, 1000
BshNI	GGYRCC	2 cut(s)	892, 1017
BsiHKAI	GWGCWC	1 cut(s)	105
BsiSI	CCGG	1 cut(s)	180
BslI	CCNNNNNNNGG	5 cut(s)	34, 207, 883, 1007, 1027
BsmAI	GTCTC	1 cut(s)	923
BsnI	GGCC	4 cut(s)	90, 280, 485, 1000
Bso31I	GGTCTC	1 cut(s)	923
Bsp119I	TTCGAA	1 cut(s)	916
Bsp120I	GGGCCC	1 cut(s)	88
Bsp1286I	GDGCHC	2 cut(s)	92, 105
Bsp1407I	TGTACA	2 cut(s)	517, 879
Bsp143I	GATC	3 cut(s)	304, 474, 898
BspACI	CCGC	3 cut(s)	164, 719, 934
BspANI	GGCC	4 cut(s)	90, 280, 485, 1000
BspCNI	CTCAG	3 cut(s)	91, 198, 930
BspLI	GGNNCC	6 cut(s)	90, 91, 128, 568, 894, 1019
BspPI	GGATC	2 cut(s)	312, 893
BspT104I	TTCGAA	1 cut(s)	916
BspT107I	GGYRCC	2 cut(s)	892, 1017
BspTNI	GGTCTC	1 cut(s)	923
BsrDI	GCAATG	5 cut(s)	105, 441, 538, 586, 799
BsrGI	TGTACA	2 cut(s)	517, 879
BsrI	ACTGG	1 cut(s)	690
BssECI	CCNNGG	2 cut(s)	459, 570
BssMI	GATC	3 cut(s)	304, 474, 898
BssT1I	CCWWGG	2 cut(s)	459, 570
Bst2UI	CCWGG	1 cut(s)	1022
Bst4CI	ACNGT	2 cut(s)	244, 742
BstAUI	TGTACA	2 cut(s)	517, 879
BstBI	TTCGAA	1 cut(s)	916
BstC8I	GCNNGC	1 cut(s)	25
BstDEI	CTNAG	3 cut(s)	99, 206, 938
BstF5I	GGATG	4 cut(s)	127, 424, 673, 727
BstKTI	GATC	3 cut(s)	307, 477, 901
BstMAI	GTCTC	1 cut(s)	923
BstMBI	GATC	3 cut(s)	304, 474, 898
BstMWI	GCNNNNNNNGC	2 cut(s)	431, 440
BstNI	CCWGG	1 cut(s)	1022
BstSCI	CCNGG	1 cut(s)	1020
BstSFI	CTRYAG	1 cut(s)	159
BstSLI	GKGCMC	1 cut(s)	92
BstV1I	GCAGC	4 cut(s)	318, 409, 689, 976
BstX2I	RGATCY	1 cut(s)	304
BstYI	RGATCY	1 cut(s)	304
BsuRI	GGCC	4 cut(s)	90, 280, 485, 1000
BtsCI	GGATG	4 cut(s)	127, 424, 673, 727
BtsI	GCAGTG	2 cut(s)	709, 894
BtsIMutI	CAGTG	2 cut(s)	709, 894
Cac8I	GCNNGC	1 cut(s)	25
Cfr13I	GGNCC	2 cut(s)	88, 89
CsiI	ACCWGGT	1 cut(s)	1020
Csp6I	GTAC	5 cut(s)	48, 211, 518, 880, 979
CviAII	CATG	7 cut(s)	118, 196, 495, 512, 651, 749, 883
CviQI	GTAC	5 cut(s)	48, 211, 518, 880, 979
DdeI	CTNAG	3 cut(s)	99, 206, 938
DpnI	GATC	3 cut(s)	306, 476, 900
DpnII	GATC	3 cut(s)	304, 474, 898
EaeI	YGGCCR	2 cut(s)	278, 998
EciI	GGCGGA	1 cut(s)	734
Eco130I	CCWWGG	2 cut(s)	459, 570
Eco24I	GRGCYC	1 cut(s)	92
Eco31I	GGTCTC	1 cut(s)	923
Eco57I	CTGAAG	1 cut(s)	238
EcoO109I	RGGNCCY	1 cut(s)	89
EcoRII	CCWGG	1 cut(s)	1020
EcoT14I	CCWWGG	2 cut(s)	459, 570
EcoT38I	GRGCYC	1 cut(s)	92
ErhI	CCWWGG	2 cut(s)	459, 570
FaeI	CATG	7 cut(s)	121, 199, 498, 515, 654, 752, 886
FatI	CATG	7 cut(s)	117, 195, 494, 511, 650, 748, 882
FauI	CCCGC	1 cut(s)	941
Fnu4HI	GCNGC	4 cut(s)	332, 423, 678, 990
FokI	GGATG	4 cut(s)	134, 431, 680, 734
FriOI	GRGCYC	1 cut(s)	92
Fsp4HI	GCNGC	4 cut(s)	332, 423, 678, 990
GluI	GCNGC	4 cut(s)	332, 423, 678, 990
HaeIII	GGCC	4 cut(s)	90, 280, 485, 1000
HapII	CCGG	1 cut(s)	180
Hin1II	CATG	7 cut(s)	121, 199, 498, 515, 654, 752, 886
HincII	GTYRAC	1 cut(s)	355
HindII	GTYRAC	1 cut(s)	355
HinfI	GANTC	3 cut(s)	228, 524, 913
HpaI	GTTAAC	1 cut(s)	355
HpaII	CCGG	1 cut(s)	180
HphI	GGTGA	2 cut(s)	782, 938
Hpy166II	GTNNAC	2 cut(s)	355, 695
Hpy188I	TCNGA	5 cut(s)	207, 371, 402, 801, 1038
Hpy188III	TCNNGA	5 cut(s)	55, 98, 815, 902, 1045
Hpy8I	GTNNAC	2 cut(s)	355, 695
Hpy99I	CGWCG	1 cut(s)	279
HpyAV	CCTTC	6 cut(s)	121, 126, 161, 262, 433, 721
HpyCH4III	ACNGT	2 cut(s)	244, 742
HpyCH4V	TGCA	9 cut(s)	23, 140, 292, 313, 531, 654, 702, 779, 792
HpyF10VI	GCNNNNNNNGC	2 cut(s)	431, 440
HpyF3I	CTNAG	3 cut(s)	99, 206, 938
Hsp92II	CATG	7 cut(s)	121, 199, 498, 515, 654, 752, 886
KspAI	GTTAAC	1 cut(s)	355
Kzo9I	GATC	3 cut(s)	304, 474, 898
Lsp1109I	GCAGC	4 cut(s)	318, 409, 689, 976
LweI	GCATC	1 cut(s)	409
MabI	ACCWGGT	1 cut(s)	1020
MaeIII	GTNAC	3 cut(s)	238, 386, 586
MalI	GATC	3 cut(s)	306, 476, 900
MboI	GATC	3 cut(s)	304, 474, 898
MboII	GAAGA	4 cut(s)	331, 625, 818, 1081
MflI	RGATCY	1 cut(s)	304
MhlI	GDGCHC	2 cut(s)	92, 105
MlsI	TGGCCA	1 cut(s)	1000
MluCI	AATT	7 cut(s)	221, 265, 549, 786, 840, 943, 1039
MluNI	TGGCCA	1 cut(s)	1000
MlyI	GAGTC	1 cut(s)	237
MnlI	CCTC	8 cut(s)	51, 138, 141, 201, 277, 280, 319, 709
Mox20I	TGGCCA	1 cut(s)	1000
MroXI	GAANNNNTTC	1 cut(s)	810
MscI	TGGCCA	1 cut(s)	1000
MseI	TTAA	3 cut(s)	354, 618, 744
MslI	CAYNNNNRTG	1 cut(s)	887
Msp20I	TGGCCA	1 cut(s)	1000
MspI	CCGG	1 cut(s)	180
MspR9I	CCNGG	1 cut(s)	1022
MvaI	CCWGG	1 cut(s)	1022
MwoI	GCNNNNNNNGC	2 cut(s)	431, 440
NdeII	GATC	3 cut(s)	304, 474, 898
NlaIII	CATG	7 cut(s)	121, 199, 498, 515, 654, 752, 886
NlaIV	GGNNCC	6 cut(s)	90, 91, 128, 568, 894, 1019
NmuCI	GTSAC	1 cut(s)	586
NspV	TTCGAA	1 cut(s)	916
PdmI	GAANNNNTTC	1 cut(s)	810
PfeI	GAWTC	2 cut(s)	524, 913
PflMI	CCANNNNNTGG	1 cut(s)	34
PkrI	GCNGC	4 cut(s)	333, 424, 679, 991
PleI	GAGTC	1 cut(s)	236
PpsI	GAGTC	1 cut(s)	236
PshBI	ATTAAT	1 cut(s)	618
Psp6I	CCWGG	1 cut(s)	1020
PspGI	CCWGG	1 cut(s)	1020
PspN4I	GGNNCC	6 cut(s)	90, 91, 128, 568, 894, 1019
PspOMI	GGGCCC	1 cut(s)	88
PspPI	GGNCC	2 cut(s)	88, 89
PsuI	RGATCY	1 cut(s)	304
RsaI	GTAC	5 cut(s)	49, 212, 519, 881, 980
RsaNI	GTAC	5 cut(s)	48, 211, 518, 880, 979
RseI	CAYNNNNRTG	1 cut(s)	887
SaqAI	TTAA	3 cut(s)	354, 618, 744
SatI	GCNGC	4 cut(s)	332, 423, 678, 990
Sau3AI	GATC	3 cut(s)	304, 474, 898
Sau96I	GGNCC	2 cut(s)	88, 89
SchI	GAGTC	1 cut(s)	237
ScrFI	CCNGG	1 cut(s)	1022
SduI	GDGCHC	2 cut(s)	92, 105
SexAI	ACCWGGT	1 cut(s)	1020
SfaNI	GCATC	1 cut(s)	409
SfcI	CTRYAG	1 cut(s)	159
SfuI	TTCGAA	1 cut(s)	916
SmiMI	CAYNNNNRTG	1 cut(s)	887
SmlI	CTYRAG	2 cut(s)	55, 335
SmoI	CTYRAG	2 cut(s)	55, 335
Sse9I	AATT	7 cut(s)	221, 265, 549, 786, 840, 943, 1039
SsiI	CCGC	3 cut(s)	164, 719, 934
StyD4I	CCNGG	1 cut(s)	1020
StyI	CCWWGG	2 cut(s)	459, 570
TaaI	ACNGT	2 cut(s)	244, 742
TaqI	TCGA	2 cut(s)	861, 916
TasI	AATT	7 cut(s)	221, 265, 549, 786, 840, 943, 1039
TatI	WGTACW	3 cut(s)	517, 879, 978
TfiI	GAWTC	2 cut(s)	524, 913
Tru1I	TTAA	3 cut(s)	354, 618, 744
Tru9I	TTAA	3 cut(s)	354, 618, 744
TscAI	CASTG	2 cut(s)	709, 894
TseFI	GTSAC	1 cut(s)	586
TseI	GCWGC	4 cut(s)	331, 422, 677, 989
Tsp45I	GTSAC	1 cut(s)	586
TspDTI	ATGAA	7 cut(s)	103, 234, 452, 483, 500, 561, 632
TspRI	CASTG	2 cut(s)	709, 894
Van91I	CCANNNNNTGG	1 cut(s)	34
VspI	ATTAAT	1 cut(s)	618
XapI	RAATTY	4 cut(s)	549, 786, 840, 1039
XmnI	GAANNNNTTC	1 cut(s)	810

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.