Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000388.1

Orthogroup ID

OG0003491

Physical Location & Seq

Genomic Coordinates Reverse (-)

207218 .. 209968

Gene Structure 2751 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000388.1_g000037.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1722 bp

ctgagaactaggagctacccaagtgaccctgaggagcagctaagtttctccaagagaatggttatggtaggggagtttctaggcggggctgctctcggagcagcattcgggctgctgtttgatgtggttaaggaagcgattgataagtctacaacgtttaattccctcctcaagaacatcaaatccactatagactttttaaaaccggtgatcgaaaagatagcagagcagaacatggaattgggtctcccggaggaggagatagggtatctcatacaacaaatggaggagggcgtagagctcgttcgtaggtcatcaaaggttagtaagtggaactgcatgaagtatcactacacggaccaacttgtggaactagatgggtctttgagaagactgcttgatgtattgaaggtgcaaggagtgagggatgtgaaggagactctggttttggctaggaaaaaccatgaccaacttgttgaatcggcaagggatgcgaaggagaccttggatttggctaggaaaaatggcgaccaacttattgaatcggcaagggatgggaaggagaccttggctttggcgaggaaaataaacatgttggtcaagcgaattgaacgtttggtaatcctttgtcctcacaaagggaagtcaagaaatcagaccaggaatagagtttcaagcgcaaacaaaaggggaggaagaagtcgattttcggaggcagcaagttcaaggataaatgagtcgcatactgagggccaagttttagagacatccaactccagatttttcagttttaaagagttgaagactgcttgtaggaattttcggccagaaggattacttggtgagggaggttttggaaaggttttcaagggttgggtggatgagaagacgcttgttccttcaaatgttggcaccggaatgatcattgctgttaagaaatggaatccagaaagcttcctaggccttgaagagtggaaggcagaggtggactttctaggaacggtttctcatcccaacattgttaaactattgggaaactgctcagcggacaacgagctactccttgtctatgaattcatgcagaaaggaagcttgggggtgcatcttttcaaaagaacccgagacattgaagcagtactgtcttgggacaacagactcaaaatagctatcggagtagctcgagccttgactttcttacacagtttaccaaaacaaatcatacacagaaatgtcaaatcctctaatatattgcttgatgagaattacaacgcaaaactctccggttttggcttggcaatattggggccaactgatggagaatcatatatagagactaaaatttttggcacatatggttatgctgctccagaatatgtttcaacaggtaatttgtacgtgaagagcgatgtgtacagcttcggtgttgtgctgctcgaaattctgacaggtctacgggcctgtgatccaaaccgttcttttccgaaacagaatttagtcgattgggctaaaccacttctctctcataaaagaaatttgaaaaccttcatggatgccaagataaatggccaatattccaccaaggaagcattacagacagcaaaggttaccctaaaatgcctagcatcagatcctgaaggtcgtccttcgatgaaagaagttgtggatgcattggagcagattcaggcaatcaaggaaaactcaaaacaaacagaacttacctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009909 GO:0009910 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048519 GO:0048580 GO:0048581 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051239 GO:0051241 GO:0051716 GO:0060089 GO:0060860 GO:0060862 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564 GO:2000026 GO:2000241 GO:2000242

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

573

Amino Acids

64.2

Weight (kDa)

9.08

Isoelectric Point (pI)

40.57

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003491)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35600 AT4G35600
fragaria_vesca	FvH4_1g10470 FvH4_1g10470 FvH4_1g10470 FvH4_1g14300 FvH4_1g14300 FvH4_1g15410 FvH4_1g15410 FvH4_1g15410 FvH4_1g15410
malus_domestica	MD02G1117900.v1.1 MD15G1232600.v1.1
prunus_persica	Prupe.7G181500_v2.0.a1
pyrus_communis	pycom02g09150 pycom15g20700
rosa_chinensis	RchiOBHm_Chr2g0097331 RchiOBHm_Chr2g0102961
rosa_laevigata	RLG00000009020 RLG00000016718 RLG00000017194 RLG00000017335
rosa_multiflora	Rmu_sc0000388.1_g000037 Rmu_sc0001060.1_g000013 Rmu_sc0035636.1_g000001
rosa_roxburghii	Rroxscaffold_2G00144760 Rroxscaffold_5G00347840
rosa_rugosa	Rorug02G0065900 Rorug02G0065900 Rorug02G0110700
rosa_samantha	Rh2CG117400 Rh2CG165600 Rh2DG116600
rosa_wichuraiana	Rw2G008810 Rw2G012430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	911
AccB7I	CCANNNNNTGG	2 cut(s)	367, 1313
AccI	GTMKAC	2 cut(s)	149, 1450
AciI	CCGC	2 cut(s)	84, 1046
AclI	AACGTT	2 cut(s)	155, 613
AclWI	GGATC	2 cut(s)	1457, 1622
AcoI	YGGCCR	2 cut(s)	824, 1564
AcsI	RAATTY	6 cut(s)	817, 1073, 1338, 1437, 1489, 1531
AcuI	CTGAAG	1 cut(s)	1653
AfaI	GTAC	3 cut(s)	1137, 1394, 1412
AfiI	CCNNNNNNNGG	4 cut(s)	256, 367, 638, 1313
AflIII	ACRYGT	1 cut(s)	591
AgeI	ACCGGT	1 cut(s)	205
AjnI	CCWGG	1 cut(s)	659
AloI	GAACNNNNNNTCC	2 cut(s)	167, 199
AluBI	AGCT	9 cut(s)	15, 40, 301, 954, 1057, 1092, 1166, 1178, 1416
AluI	AGCT	9 cut(s)	15, 40, 301, 954, 1057, 1092, 1166, 1178, 1416
Alw21I	GWGCWC	1 cut(s)	303
Alw26I	GTCTC	7 cut(s)	251, 431, 494, 557, 758, 1116, 1325
AlwI	GGATC	2 cut(s)	1457, 1622
AlwNI	CAGNNNCTG	1 cut(s)	1631
Ama87I	CYCGRG	2 cut(s)	1119, 1179
AoxI	GGCC	6 cut(s)	751, 824, 961, 1304, 1455, 1564
ApeKI	GCWGC	7 cut(s)	37, 89, 101, 112, 716, 1361, 1429
ApoI	RAATTY	6 cut(s)	817, 1073, 1338, 1437, 1489, 1531
ArsI	GACNNNNNNTTYG	6 cut(s)	430, 462, 493, 525, 556, 588
AsiGI	ACCGGT	1 cut(s)	205
Asp700I	GAANNNNTTC	2 cut(s)	1003, 1541
AspA2I	CCTAGG	1 cut(s)	958
AspLEI	GCGC	1 cut(s)	680
AspS9I	GGNCC	4 cut(s)	358, 751, 1304, 1455
AsuC2I	CCSGG	1 cut(s)	251
AsuHPI	GGTGA	2 cut(s)	220, 854
AvaI	CYCGRG	2 cut(s)	1119, 1179
AvaII	GGWCC	1 cut(s)	358
AvrII	CCTAGG	1 cut(s)	958
AxyI	CCTNAGG	1 cut(s)	30
BalI	TGGCCA	1 cut(s)	1566
BanI	GGYRCC	1 cut(s)	911
BanII	GRGCYC	1 cut(s)	303
BarI	GAAGNNNNNNTAC	2 cut(s)	335, 367
BbsI	GAAGAC	3 cut(s)	397, 809, 893
Bbv12I	GWGCWC	1 cut(s)	303
BbvI	GCAGC	7 cut(s)	49, 76, 99, 113, 728, 1348, 1416
BccI	CCATC	3 cut(s)	371, 548, 1307
BciT130I	CCWGG	1 cut(s)	661
BclI	TGATCA	1 cut(s)	921
BcnI	CCSGG	1 cut(s)	251
BcoDI	GTCTC	7 cut(s)	251, 431, 494, 557, 758, 1116, 1325
BfaI	CTAG	8 cut(s)	9, 80, 374, 453, 516, 959, 995, 1619
BfmI	CTRYAG	1 cut(s)	189
BisI	GCNGC	7 cut(s)	38, 90, 102, 113, 717, 1362, 1430
BlnI	CCTAGG	1 cut(s)	958
BlpI	GCTNAGC	1 cut(s)	1042
BlsI	GCNGC	7 cut(s)	39, 91, 103, 114, 718, 1363, 1431
BmcAI	AGTACT	1 cut(s)	1137
Bme1390I	CCNGG	2 cut(s)	251, 661
Bme18I	GGWCC	1 cut(s)	358
BmeT110I	CYCGRG	2 cut(s)	1119, 1179
BmgT120I	GGNCC	4 cut(s)	358, 751, 1304, 1455
BmiI	GGNNCC	2 cut(s)	913, 1305
BmrFI	CCNGG	2 cut(s)	251, 661
BmsI	GCATC	5 cut(s)	481, 1111, 1540, 1631, 1654
BpiI	GAAGAC	3 cut(s)	397, 809, 893
BpmI	CTGGAG	2 cut(s)	760, 1350
Bpu1102I	GCTNAGC	1 cut(s)	1042
BpuEI	CTTGAG	1 cut(s)	155
BpuMI	CCSGG	1 cut(s)	251
BsaAI	YACGTR	1 cut(s)	1396
BsaI	GGTCTC	3 cut(s)	251, 494, 557
BsaJI	CCNNGG	4 cut(s)	504, 567, 958, 1578
BsaWI	WCCGGW	3 cut(s)	205, 914, 1280
BsaXI	ACNNNNNCTCC	2 cut(s)	251, 281
Bsc4I	CCNNNNNNNGG	4 cut(s)	256, 367, 638, 1313
Bse118I	RCCGGY	1 cut(s)	205
Bse21I	CCTNAGG	1 cut(s)	30
Bse3DI	GCAATG	1 cut(s)	924
BseBI	CCWGG	1 cut(s)	661
BseDI	CCNNGG	4 cut(s)	504, 567, 958, 1578
BseGI	GGATG	8 cut(s)	433, 496, 559, 767, 886, 1009, 1555, 1669
BseLI	CCNNNNNNNGG	4 cut(s)	256, 367, 638, 1313
BseMI	GCAATG	1 cut(s)	924
BseMII	CTCAG	3 cut(s)	21, 738, 1056
BseRI	GAGGAG	5 cut(s)	47, 158, 269, 272, 302
BseXI	GCAGC	7 cut(s)	49, 76, 99, 113, 728, 1348, 1416
BshFI	GGCC	6 cut(s)	753, 826, 963, 1306, 1457, 1566
BshNI	GGYRCC	1 cut(s)	911
BshTI	ACCGGT	1 cut(s)	205
BsiHKAI	GWGCWC	1 cut(s)	303
BsiHKCI	CYCGRG	2 cut(s)	1119, 1179
BsiSI	CCGG	4 cut(s)	206, 251, 915, 1281
BslFI	GGGAC	1 cut(s)	1160
BslI	CCNNNNNNNGG	4 cut(s)	256, 367, 638, 1313
BsmAI	GTCTC	7 cut(s)	251, 431, 494, 557, 758, 1116, 1325
BsmFI	GGGAC	1 cut(s)	1160
BsmI	GAATGC	1 cut(s)	104
BsnI	GGCC	6 cut(s)	753, 826, 963, 1306, 1457, 1566
Bso31I	GGTCTC	3 cut(s)	251, 494, 557
BsoBI	CYCGRG	2 cut(s)	1119, 1179
Bsp1286I	GDGCHC	1 cut(s)	303
Bsp1407I	TGTACA	1 cut(s)	1410
Bsp143I	GATC	4 cut(s)	210, 921, 1462, 1627
Bsp1720I	GCTNAGC	1 cut(s)	1042
BspACI	CCGC	2 cut(s)	84, 1046
BspANI	GGCC	6 cut(s)	753, 826, 963, 1306, 1457, 1566
BspCNI	CTCAG	3 cut(s)	22, 739, 1055
BspLI	GGNNCC	2 cut(s)	913, 1305
BspPI	GGATC	2 cut(s)	1457, 1622
BspQI	GCTCTTC	1 cut(s)	1394
BspT107I	GGYRCC	1 cut(s)	911
BspTNI	GGTCTC	3 cut(s)	251, 494, 557
BsrDI	GCAATG	1 cut(s)	924
BsrFI	RCCGGY	1 cut(s)	205
BsrGI	TGTACA	1 cut(s)	1410
BssAI	RCCGGY	1 cut(s)	205
BssECI	CCNNGG	4 cut(s)	504, 567, 958, 1578
BssMI	GATC	4 cut(s)	210, 921, 1462, 1627
BssT1I	CCWWGG	4 cut(s)	504, 567, 958, 1578
Bst2UI	CCWGG	1 cut(s)	661
Bst4CI	ACNGT	4 cut(s)	1003, 1140, 1202, 1472
Bst6I	CTCTTC	2 cut(s)	963, 1394
BstAPI	GCANNNNNTGC	1 cut(s)	491
BstAUI	TGTACA	1 cut(s)	1410
BstBAI	YACGTR	1 cut(s)	1396
BstDEI	CTNAG	5 cut(s)	2, 30, 41, 747, 1042
BstEII	GGTNACC	1 cut(s)	1603
BstENI	CCTNNNNNAGG	1 cut(s)	636
BstF5I	GGATG	8 cut(s)	433, 496, 559, 767, 886, 1009, 1555, 1669
BstHHI	GCGC	1 cut(s)	680
BstKTI	GATC	4 cut(s)	213, 924, 1465, 1630
BstMAI	GTCTC	7 cut(s)	251, 431, 494, 557, 758, 1116, 1325
BstMBI	GATC	4 cut(s)	210, 921, 1462, 1627
BstMWI	GCNNNNNNNGC	3 cut(s)	98, 491, 960
BstNI	CCWGG	1 cut(s)	661
BstNSI	RCATGY	1 cut(s)	595
BstPI	GGTNACC	1 cut(s)	1603
BstSCI	CCNGG	2 cut(s)	249, 659
BstSFI	CTRYAG	1 cut(s)	189
BstV1I	GCAGC	7 cut(s)	49, 76, 99, 113, 728, 1348, 1416
BstV2I	GAAGAC	3 cut(s)	397, 809, 893
BstX2I	RGATCY	1 cut(s)	1627
BstXI	CCANNNNNNTGG	1 cut(s)	58
BstYI	RGATCY	1 cut(s)	1627
Bsu36I	CCTNAGG	1 cut(s)	30
BsuRI	GGCC	6 cut(s)	753, 826, 963, 1306, 1457, 1566
BtgZI	GCGATG	1 cut(s)	1419
BtsCI	GGATG	8 cut(s)	433, 496, 559, 767, 886, 1009, 1555, 1669
CaiI	CAGNNNCTG	1 cut(s)	1631
CfoI	GCGC	1 cut(s)	680
Cfr10I	RCCGGY	1 cut(s)	205
Cfr13I	GGNCC	4 cut(s)	358, 751, 1304, 1455
CseI	GACGC	1 cut(s)	898
Csp6I	GTAC	3 cut(s)	1136, 1393, 1411
CspAI	ACCGGT	1 cut(s)	205
CviAII	CATG	6 cut(s)	235, 340, 464, 592, 1078, 1546
CviQI	GTAC	3 cut(s)	1136, 1393, 1411
DdeI	CTNAG	5 cut(s)	2, 30, 41, 747, 1042
DpnI	GATC	4 cut(s)	212, 923, 1464, 1629
DpnII	GATC	4 cut(s)	210, 921, 1462, 1627
DraI	TTTAAA	2 cut(s)	201, 793
EaeI	YGGCCR	2 cut(s)	824, 1564
Eam1104I	CTCTTC	2 cut(s)	963, 1394
EarI	CTCTTC	2 cut(s)	963, 1394
Ecl136II	GAGCTC	1 cut(s)	301
Eco130I	CCWWGG	4 cut(s)	504, 567, 958, 1578
Eco147I	AGGCCT	1 cut(s)	963
Eco24I	GRGCYC	1 cut(s)	303
Eco31I	GGTCTC	3 cut(s)	251, 494, 557
Eco47I	GGWCC	1 cut(s)	358
Eco53kI	GAGCTC	1 cut(s)	301
Eco57I	CTGAAG	1 cut(s)	1653
Eco81I	CCTNAGG	1 cut(s)	30
Eco88I	CYCGRG	2 cut(s)	1119, 1179
Eco91I	GGTNACC	1 cut(s)	1603
EcoICRI	GAGCTC	1 cut(s)	301
EcoNI	CCTNNNNNAGG	1 cut(s)	636
EcoO65I	GGTNACC	1 cut(s)	1603
EcoRI	GAATTC	1 cut(s)	1073
EcoRII	CCWGG	1 cut(s)	659
EcoT14I	CCWWGG	4 cut(s)	504, 567, 958, 1578
EcoT22I	ATGCAT	1 cut(s)	1669
EcoT38I	GRGCYC	1 cut(s)	303
ErhI	CCWWGG	4 cut(s)	504, 567, 958, 1578
FaeI	CATG	6 cut(s)	238, 343, 467, 595, 1081, 1549
FalI	AAGNNNNNCTT	6 cut(s)	488, 520, 551, 583, 822, 854
FaqI	GGGAC	1 cut(s)	1160
FatI	CATG	6 cut(s)	234, 339, 463, 591, 1077, 1545
FauI	CCCGC	1 cut(s)	77
FauNDI	CATATG	1 cut(s)	1351
FbaI	TGATCA	1 cut(s)	921
FblI	GTMKAC	2 cut(s)	149, 1450
Fnu4HI	GCNGC	7 cut(s)	38, 90, 102, 113, 717, 1362, 1430
FokI	GGATG	8 cut(s)	440, 503, 566, 754, 893, 996, 1562, 1676
FriOI	GRGCYC	1 cut(s)	303
Fsp4HI	GCNGC	7 cut(s)	38, 90, 102, 113, 717, 1362, 1430
FspBI	CTAG	8 cut(s)	9, 80, 374, 453, 516, 959, 995, 1619
GlaI	GCGC	1 cut(s)	679
GluI	GCNGC	7 cut(s)	38, 90, 102, 113, 717, 1362, 1430
GsuI	CTGGAG	2 cut(s)	760, 1350
HaeIII	GGCC	6 cut(s)	753, 826, 963, 1306, 1457, 1566
HapII	CCGG	4 cut(s)	206, 251, 915, 1281
HgaI	GACGC	1 cut(s)	898
HhaI	GCGC	1 cut(s)	680
Hin1II	CATG	6 cut(s)	238, 343, 467, 595, 1081, 1549
Hin6I	GCGC	1 cut(s)	678
HinP1I	GCGC	1 cut(s)	678
HindIII	AAGCTT	2 cut(s)	952, 1090
HinfI	GANTC	8 cut(s)	439, 479, 542, 737, 943, 1155, 1319, 1678
HpaII	CCGG	4 cut(s)	206, 251, 915, 1281
HphI	GGTGA	2 cut(s)	220, 854
Hpy166II	GTNNAC	5 cut(s)	150, 988, 1205, 1411, 1451
Hpy188I	TCNGA	7 cut(s)	98, 657, 712, 1172, 1443, 1482, 1627
Hpy188III	TCNNGA	6 cut(s)	172, 648, 777, 947, 1367, 1631
Hpy8I	GTNNAC	5 cut(s)	150, 988, 1205, 1411, 1451
HpyCH4III	ACNGT	4 cut(s)	1003, 1140, 1202, 1472
HpyCH4IV	ACGT	3 cut(s)	155, 613, 1395
HpyCH4V	TGCA	5 cut(s)	339, 415, 1081, 1102, 1667
HpyF10VI	GCNNNNNNNGC	3 cut(s)	98, 491, 960
HpyF3I	CTNAG	5 cut(s)	2, 30, 41, 747, 1042
HpySE526I	ACGT	3 cut(s)	155, 613, 1395
Hsp92II	CATG	6 cut(s)	238, 343, 467, 595, 1081, 1549
HspAI	GCGC	1 cut(s)	678
Ksp22I	TGATCA	1 cut(s)	921
Kzo9I	GATC	4 cut(s)	210, 921, 1462, 1627
LguI	GCTCTTC	1 cut(s)	1394
LmnI	GCTCC	5 cut(s)	12, 34, 98, 1369, 1672
Lsp1109I	GCAGC	7 cut(s)	49, 76, 99, 113, 728, 1348, 1416
LweI	GCATC	5 cut(s)	481, 1111, 1540, 1631, 1654
MaeI	CTAG	8 cut(s)	9, 80, 374, 453, 516, 959, 995, 1619
MaeII	ACGT	3 cut(s)	155, 613, 1395
MaeIII	GTNAC	2 cut(s)	23, 1603
MalI	GATC	4 cut(s)	212, 923, 1464, 1629
MboI	GATC	4 cut(s)	210, 921, 1462, 1627
MboII	GAAGA	6 cut(s)	402, 708, 814, 898, 980, 1411
MflI	RGATCY	1 cut(s)	1627
MhlI	GDGCHC	1 cut(s)	303
MlsI	TGGCCA	1 cut(s)	1566
MluNI	TGGCCA	1 cut(s)	1566
MlyI	GAGTC	3 cut(s)	433, 746, 1149
MmeI	TCCRAC	1 cut(s)	795
Mox20I	TGGCCA	1 cut(s)	1566
Mph1103I	ATGCAT	1 cut(s)	1669
MroXI	GAANNNNTTC	2 cut(s)	1003, 1541
MscI	TGGCCA	1 cut(s)	1566
MseI	TTAA	6 cut(s)	129, 159, 200, 792, 933, 1023
MslI	CAYNNNNRTG	2 cut(s)	917, 1227
Msp20I	TGGCCA	1 cut(s)	1566
MspA1I	CMGCKG	1 cut(s)	1046
MspI	CCGG	4 cut(s)	206, 251, 915, 1281
MspR9I	CCNGG	2 cut(s)	251, 661
Mva1269I	GAATGC	1 cut(s)	104
MvaI	CCWGG	1 cut(s)	661
MwoI	GCNNNNNNNGC	3 cut(s)	98, 491, 960
NciI	CCSGG	1 cut(s)	251
NdeI	CATATG	1 cut(s)	1351
NdeII	GATC	4 cut(s)	210, 921, 1462, 1627
NlaIII	CATG	6 cut(s)	238, 343, 467, 595, 1081, 1549
NlaIV	GGNNCC	2 cut(s)	913, 1305
NmuCI	GTSAC	1 cut(s)	23
NsiI	ATGCAT	1 cut(s)	1669
NspI	RCATGY	1 cut(s)	595
PaeR7I	CTCGAG	1 cut(s)	1179
PceI	AGGCCT	1 cut(s)	963
PciI	ACATGT	1 cut(s)	591
PciSI	GCTCTTC	1 cut(s)	1394
PcsI	WCGNNNNNNNCGW	1 cut(s)	1401
PctI	GAATGC	1 cut(s)	104
PdmI	GAANNNNTTC	2 cut(s)	1003, 1541
PfeI	GAWTC	5 cut(s)	479, 542, 943, 1319, 1678
PflMI	CCANNNNNTGG	2 cut(s)	367, 1313
PfoI	TCCNGGA	1 cut(s)	249
PinAI	ACCGGT	1 cut(s)	205
PkrI	GCNGC	7 cut(s)	39, 91, 103, 114, 718, 1363, 1431
PleI	GAGTC	3 cut(s)	433, 745, 1149
PpsI	GAGTC	3 cut(s)	433, 745, 1149
Ppu21I	YACGTR	1 cut(s)	1396
PscI	ACATGT	1 cut(s)	591
Psp124BI	GAGCTC	1 cut(s)	303
Psp1406I	AACGTT	2 cut(s)	155, 613
Psp6I	CCWGG	1 cut(s)	659
PspEI	GGTNACC	1 cut(s)	1603
PspGI	CCWGG	1 cut(s)	659
PspN4I	GGNNCC	2 cut(s)	913, 1305
PspPI	GGNCC	4 cut(s)	358, 751, 1304, 1455
PspXI	VCTCGAGB	1 cut(s)	1179
PsrI	GAACNNNNNNTAC	2 cut(s)	288, 320
PstNI	CAGNNNCTG	1 cut(s)	1631
PsuI	RGATCY	1 cut(s)	1627
RsaI	GTAC	3 cut(s)	1137, 1394, 1412
RsaNI	GTAC	3 cut(s)	1136, 1393, 1411
RseI	CAYNNNNRTG	2 cut(s)	917, 1227
SacI	GAGCTC	1 cut(s)	303
SapI	GCTCTTC	1 cut(s)	1394
SaqAI	TTAA	6 cut(s)	129, 159, 200, 792, 933, 1023
SatI	GCNGC	7 cut(s)	38, 90, 102, 113, 717, 1362, 1430
Sau3AI	GATC	4 cut(s)	210, 921, 1462, 1627
Sau96I	GGNCC	4 cut(s)	358, 751, 1304, 1455
ScaI	AGTACT	1 cut(s)	1137
SchI	GAGTC	3 cut(s)	433, 746, 1149
ScrFI	CCNGG	2 cut(s)	251, 661
SduI	GDGCHC	1 cut(s)	303
SfaNI	GCATC	5 cut(s)	481, 1111, 1540, 1631, 1654
SfcI	CTRYAG	1 cut(s)	189
Sfr274I	CTCGAG	1 cut(s)	1179
SinI	GGWCC	1 cut(s)	358
SlaI	CTCGAG	1 cut(s)	1179
SmiMI	CAYNNNNRTG	2 cut(s)	917, 1227
SmlI	CTYRAG	2 cut(s)	170, 1179
SmoI	CTYRAG	2 cut(s)	170, 1179
SseBI	AGGCCT	1 cut(s)	963
SsiI	CCGC	2 cut(s)	84, 1046
SspI	AATATT	2 cut(s)	1299, 1571
SspMI	CTAG	8 cut(s)	9, 80, 374, 453, 516, 959, 995, 1619
SstI	GAGCTC	1 cut(s)	303
StuI	AGGCCT	1 cut(s)	963
StyD4I	CCNGG	2 cut(s)	249, 659
StyI	CCWWGG	4 cut(s)	504, 567, 958, 1578
TaaI	ACNGT	4 cut(s)	1003, 1140, 1202, 1472
TaiI	ACGT	3 cut(s)	158, 616, 1398
TaqI	TCGA	6 cut(s)	213, 703, 1180, 1434, 1497, 1646
TatI	WGTACW	2 cut(s)	1135, 1410
TfiI	GAWTC	5 cut(s)	479, 542, 943, 1319, 1678
Tru1I	TTAA	6 cut(s)	129, 159, 200, 792, 933, 1023
Tru9I	TTAA	6 cut(s)	129, 159, 200, 792, 933, 1023
TseFI	GTSAC	1 cut(s)	23
TseI	GCWGC	7 cut(s)	37, 89, 101, 112, 716, 1361, 1429
Tsp45I	GTSAC	1 cut(s)	23
TspDTI	ATGAA	5 cut(s)	356, 1066, 1086, 1534, 1664
TspGWI	ACGGA	1 cut(s)	371
Van91I	CCANNNNNTGG	2 cut(s)	367, 1313
VpaK11BI	GGWCC	1 cut(s)	358
XagI	CCTNNNNNAGG	1 cut(s)	636
XapI	RAATTY	6 cut(s)	817, 1073, 1338, 1437, 1489, 1531
XceI	RCATGY	1 cut(s)	595
XhoI	CTCGAG	1 cut(s)	1179
XmaJI	CCTAGG	1 cut(s)	958
XmiI	GTMKAC	2 cut(s)	149, 1450
XmnI	GAANNNNTTC	2 cut(s)	1003, 1541
XspI	CTAG	8 cut(s)	9, 80, 374, 453, 516, 959, 995, 1619
ZrmI	AGTACT	1 cut(s)	1137
Zsp2I	ATGCAT	1 cut(s)	1669

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.