RLG00000017335
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
15450290 .. 15452075
1786 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000017335

Sequence Viewer

Length: 1068 bp
ATGCCCAGCAGTGAGCGCCGGAGGAACATAGATTCGGACGCTAGCAGCGGCGGAGGAACAAGTCTATTCTCGGAGGGAAAAACATCAACATTTCGAAGCAAAGATGATGATCAGTCAATTGGTGGCCATATTTCGGAGACATCCAACTTGAGAGTTTTCAGTTTTGCAGAGTTGAAGACTGCTACAAGGAATTTCAGGGCCGACACAATGCTTGGTGAGGGAGGTTTTGGGACTGTTTTCAAGGGCTGGTTGGATGAAACGACGCTTTCACCTTCTAAAGCTGGCACTGGAATGATGGTTGCTATCAAGAAACTGAAAGCAGAAAGTTTTCAAGGCTTTAAAGAGTGGCAGGCAGAGGTGAACTTTGTAGGAAGGCTTTCTCATCCCAACCTTGTGAAGCTGTTGGGATACTGTTGGGAAGATAAGGAGTTACTCCTAGTTTATGAGTTCATGATCAGAGAAAGCTTGGAGAATCATCTTTTCAGACGTCATCCAAACCTTGAACCACCATCTTGGGAAAAAAGAATCAAAATAGCTATCGGAGCAGCTCGAGGCCTGGCCTTCTTGCACAGTTCAGAAAAACAAATTATATACAGAGATTTTAAGACCTCAAATATATTGCTTGATGGGAATTACAATGCAAAACTCTCGGATTTTGGCTTGGTGAAATTGGGACCAACTGGTGGAGACTCACATGTGTCAACTAGGGTTATGGGGACATATGGGTATGCTGCTCCAGAATACGTTGCAACAGGTCATTTGTATGTGAAGAGCGATGTGTATGGCTTCGGTGTTGTACTGCTTGAACTTCTCACAGGGTTACGAGCACTCGATACTAAACGCCCCACGGAACAACTTAATCTGGTAGACTGGGCTAAACCACTTCTTTCAAATAAAAGAAAGTTGAAAACCATCATCGATTCGCGGATGGAAGGCCAGTATTCCTTGAAAGCAGCATTAAAGGCAGGACAGATTACTCTAAAATGTCTAGCACCAGATCCTGAAATCCGACCTTCCATGAAAGAAGTTGTGGAGGAACTGGAACAGATTCAGGCAATCAAGGAATAA

Protein Analysis

356

Amino Acids

39.58

Weight (kDa)

8.8

Isoelectric Point (pI)

36.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 68 - 347 2.2e-43 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 68 - 345 2e-41 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 490
AccB7I CCANNNNNTGG 1 cut(s) 683
AccI GTMKAC 1 cut(s) 867
AccII CGCG 1 cut(s) 925
AciI CCGC 3 cut(s) 48, 51, 925
AclWI GGATC 1 cut(s) 992
AcoI YGGCCR 1 cut(s) 124
AcsI RAATTY 1 cut(s) 190
AcyI GRCGYC 1 cut(s) 487
AfaI GTAC 1 cut(s) 798
AfiI CCNNNNNNNGG 2 cut(s) 133, 683
AflIII ACRYGT 1 cut(s) 694
AgsI TTSAA 8 cut(s) 175, 241, 332, 503, 806, 891, 907, 949
AjnI CCWGG 1 cut(s) 555
AluBI AGCT 5 cut(s) 281, 400, 465, 536, 548
AluI AGCT 5 cut(s) 281, 400, 465, 536, 548
Alw21I GWGCWC 1 cut(s) 829
Alw26I GTCTC 2 cut(s) 131, 681
AlwI GGATC 1 cut(s) 992
AlwNI CAGNNNCTG 1 cut(s) 1001
Ama87I CYCGRG 1 cut(s) 549
AoxI GGCC 5 cut(s) 124, 198, 553, 558, 934
ApeKI GCWGC 4 cut(s) 45, 545, 731, 953
ApoI RAATTY 1 cut(s) 190
Asp700I GAANNNNTTC 3 cut(s) 327, 376, 1047
AspLEI GCGC 1 cut(s) 18
AspS9I GGNCC 2 cut(s) 198, 674
AsuHPI GGTGA 4 cut(s) 227, 261, 370, 676
AsuII TTCGAA 1 cut(s) 94
AsuNHI GCTAGC 1 cut(s) 41
AvaI CYCGRG 1 cut(s) 549
AvaII GGWCC 1 cut(s) 674
BalI TGGCCA 1 cut(s) 126
BbsI GAAGAC 1 cut(s) 182
Bbv12I GWGCWC 1 cut(s) 829
BbvI GCAGC 4 cut(s) 57, 557, 718, 965
BccI CCATC 5 cut(s) 289, 517, 620, 920, 922
BcgI CGANNNNNNTGC 2 cut(s) 630, 664
BciT130I CCWGG 1 cut(s) 557
BciVI GTATCC 1 cut(s) 401
BclI TGATCA 2 cut(s) 109, 453
BcoDI GTCTC 2 cut(s) 131, 681
BfaI CTAG 4 cut(s) 42, 437, 705, 989
BfoI RGCGCY 1 cut(s) 19
BfuI GTATCC 1 cut(s) 401
BisI GCNGC 5 cut(s) 46, 49, 546, 732, 954
BlsI GCNGC 5 cut(s) 47, 50, 547, 733, 955
Bme1390I CCNGG 1 cut(s) 557
Bme18I GGWCC 1 cut(s) 674
BmeT110I CYCGRG 1 cut(s) 549
BmgT120I GGNCC 2 cut(s) 198, 674
BmiI GGNNCC 1 cut(s) 675
BmrFI CCNGG 1 cut(s) 557
BmrI ACTGGG 1 cut(s) 880
BmtI GCTAGC 1 cut(s) 45
BmuI ACTGGG 1 cut(s) 880
BpiI GAAGAC 1 cut(s) 182
BpmI CTGGAG 1 cut(s) 720
Bpu14I TTCGAA 1 cut(s) 94
BpuEI CTTGAG 1 cut(s) 169
Bsa29I ATCGAT 1 cut(s) 918
BsaBI GATNNNNATC 1 cut(s) 108
BsaHI GRCGYC 1 cut(s) 487
BsaJI CCNNGG 1 cut(s) 846
Bsc4I CCNNNNNNNGG 2 cut(s) 133, 683
Bse1I ACTGG 5 cut(s) 292, 685, 875, 937, 1044
Bse8I GATNNNNATC 1 cut(s) 108
BseBI CCWGG 1 cut(s) 557
BseCI ATCGAT 1 cut(s) 918
BseDI CCNNGG 1 cut(s) 846
BseGI GGATG 5 cut(s) 140, 259, 382, 490, 933
BseJI GATNNNNATC 1 cut(s) 108
BseLI CCNNNNNNNGG 2 cut(s) 133, 683
BseNI ACTGG 5 cut(s) 292, 685, 875, 937, 1044
BseXI GCAGC 4 cut(s) 57, 557, 718, 965
BseYI CCCAGC 1 cut(s) 5
Bsh1236I CGCG 1 cut(s) 925
BshFI GGCC 5 cut(s) 126, 200, 555, 560, 936
BshVI ATCGAT 1 cut(s) 918
BsiHKAI GWGCWC 1 cut(s) 829
BsiHKCI CYCGRG 1 cut(s) 549
BsiSI CCGG 1 cut(s) 19
BslFI GGGAC 3 cut(s) 244, 687, 730
BslI CCNNNNNNNGG 2 cut(s) 133, 683
BsmAI GTCTC 2 cut(s) 131, 681
BsmFI GGGAC 3 cut(s) 244, 687, 730
BsnI GGCC 5 cut(s) 126, 200, 555, 560, 936
BsoBI CYCGRG 1 cut(s) 549
Bsp119I TTCGAA 1 cut(s) 94
Bsp1286I GDGCHC 1 cut(s) 829
Bsp143I GATC 3 cut(s) 109, 453, 997
BspACI CCGC 3 cut(s) 48, 51, 925
BspANI GGCC 5 cut(s) 126, 200, 555, 560, 936
BspDI ATCGAT 1 cut(s) 918
BspFNI CGCG 1 cut(s) 925
BspHI TCATGA 1 cut(s) 450
BspLI GGNNCC 1 cut(s) 675
BspOI GCTAGC 1 cut(s) 45
BspPI GGATC 1 cut(s) 992
BspQI GCTCTTC 1 cut(s) 764
BspT104I TTCGAA 1 cut(s) 94
BsrI ACTGG 5 cut(s) 292, 685, 875, 937, 1044
BssECI CCNNGG 1 cut(s) 846
BssMI GATC 3 cut(s) 109, 453, 997
BssNI GRCGYC 1 cut(s) 487
Bst2UI CCWGG 1 cut(s) 557
Bst4CI ACNGT 3 cut(s) 235, 413, 572
Bst6I CTCTTC 1 cut(s) 764
BstACI GRCGYC 1 cut(s) 487
BstBI TTCGAA 1 cut(s) 94
BstC8I GCNNGC 3 cut(s) 43, 283, 351
BstDSI CCRYGG 1 cut(s) 846
BstF5I GGATG 5 cut(s) 140, 259, 382, 490, 933
BstFNI CGCG 1 cut(s) 925
BstH2I RGCGCY 1 cut(s) 19
BstHHI GCGC 1 cut(s) 18
BstKTI GATC 3 cut(s) 112, 456, 1000
BstMAI GTCTC 2 cut(s) 131, 681
BstMBI GATC 3 cut(s) 109, 453, 997
BstMWI GCNNNNNNNGC 3 cut(s) 15, 542, 962
BstNI CCWGG 1 cut(s) 557
BstNSI RCATGY 1 cut(s) 698
BstSCI CCNGG 1 cut(s) 555
BstUI CGCG 1 cut(s) 925
BstV1I GCAGC 4 cut(s) 57, 557, 718, 965
BstV2I GAAGAC 1 cut(s) 182
BstX2I RGATCY 1 cut(s) 997
BstXI CCANNNNNNTGG 1 cut(s) 513
BstYI RGATCY 1 cut(s) 997
Bsu15I ATCGAT 1 cut(s) 918
BsuI GTATCC 1 cut(s) 401
BsuRI GGCC 5 cut(s) 126, 200, 555, 560, 936
BsuTUI ATCGAT 1 cut(s) 918
BtgI CCRYGG 1 cut(s) 846
BtgZI GCGATG 1 cut(s) 789
BtsCI GGATG 5 cut(s) 140, 259, 382, 490, 933
BtsI GCAGTG 1 cut(s) 16
BtsIMutI CAGTG 2 cut(s) 16, 285
Cac8I GCNNGC 3 cut(s) 43, 283, 351
CaiI CAGNNNCTG 1 cut(s) 1001
CciI TCATGA 1 cut(s) 450
CfoI GCGC 1 cut(s) 18
Cfr13I GGNCC 2 cut(s) 198, 674
ClaI ATCGAT 1 cut(s) 918
CseI GACGC 2 cut(s) 47, 271
Csp6I GTAC 1 cut(s) 797
CviAII CATG 3 cut(s) 451, 695, 1018
CviQI GTAC 1 cut(s) 797
DpnI GATC 3 cut(s) 111, 455, 999
DpnII GATC 3 cut(s) 109, 453, 997
DraI TTTAAA 1 cut(s) 340
EaeI YGGCCR 1 cut(s) 124
Eam1104I CTCTTC 1 cut(s) 764
EarI CTCTTC 1 cut(s) 764
EciI GGCGGA 1 cut(s) 66
Eco147I AGGCCT 1 cut(s) 555
Eco47I GGWCC 1 cut(s) 674
Eco88I CYCGRG 1 cut(s) 549
EcoRII CCWGG 1 cut(s) 555
FaeI CATG 3 cut(s) 454, 698, 1021
FaqI GGGAC 3 cut(s) 244, 687, 730
FatI CATG 3 cut(s) 450, 694, 1017
FauNDI CATATG 1 cut(s) 721
FbaI TGATCA 2 cut(s) 109, 453
FblI GTMKAC 1 cut(s) 867
Fnu4HI GCNGC 5 cut(s) 46, 49, 546, 732, 954
FokI GGATG 5 cut(s) 127, 266, 369, 477, 940
Fsp4HI GCNGC 5 cut(s) 46, 49, 546, 732, 954
FspBI CTAG 4 cut(s) 42, 437, 705, 989
GlaI GCGC 1 cut(s) 17
GluI GCNGC 5 cut(s) 46, 49, 546, 732, 954
GsaI CCCAGC 1 cut(s) 9
GsuI CTGGAG 1 cut(s) 720
HaeII RGCGCY 1 cut(s) 19
HaeIII GGCC 5 cut(s) 126, 200, 555, 560, 936
HapII CCGG 1 cut(s) 19
HgaI GACGC 2 cut(s) 47, 271
HhaI GCGC 1 cut(s) 18
Hin1I GRCGYC 1 cut(s) 487
Hin1II CATG 3 cut(s) 454, 698, 1021
Hin6I GCGC 1 cut(s) 16
HinP1I GCGC 1 cut(s) 16
HincII GTYRAC 1 cut(s) 702
HindII GTYRAC 1 cut(s) 702
HindIII AAGCTT 1 cut(s) 463
HinfI GANTC 6 cut(s) 32, 472, 525, 689, 920, 1048
HpaII CCGG 1 cut(s) 19
HphI GGTGA 4 cut(s) 227, 261, 370, 676
Hpy166II GTNNAC 3 cut(s) 361, 702, 868
Hpy188I TCNGA 9 cut(s) 37, 73, 136, 458, 485, 542, 577, 652, 1010
Hpy188III TCNNGA 4 cut(s) 307, 451, 737, 1001
Hpy8I GTNNAC 3 cut(s) 361, 702, 868
Hpy99I CGWCG 1 cut(s) 265
HpyAV CCTTC 5 cut(s) 282, 366, 571, 926, 1023
HpyCH4III ACNGT 3 cut(s) 235, 413, 572
HpyCH4IV ACGT 2 cut(s) 487, 744
HpyCH4V TGCA 4 cut(s) 167, 568, 641, 749
HpyF10VI GCNNNNNNNGC 3 cut(s) 15, 542, 962
HpySE526I ACGT 2 cut(s) 487, 744
Hsp92I GRCGYC 1 cut(s) 487
Hsp92II CATG 3 cut(s) 454, 698, 1021
HspAI GCGC 1 cut(s) 16
Ksp22I TGATCA 2 cut(s) 109, 453
Kzo9I GATC 3 cut(s) 109, 453, 997
LguI GCTCTTC 1 cut(s) 764
LmnI GCTCC 2 cut(s) 542, 739
Lsp1109I GCAGC 4 cut(s) 57, 557, 718, 965
MaeI CTAG 4 cut(s) 42, 437, 705, 989
MaeII ACGT 2 cut(s) 487, 744
MaeIII GTNAC 2 cut(s) 429, 819
MalI GATC 3 cut(s) 111, 455, 999
MboI GATC 3 cut(s) 109, 453, 997
MboII GAAGA 3 cut(s) 187, 431, 781
MfeI CAATTG 1 cut(s) 117
MflI RGATCY 1 cut(s) 997
MhlI GDGCHC 1 cut(s) 829
MlsI TGGCCA 1 cut(s) 126
MluCI AATT 5 cut(s) 117, 190, 585, 631, 668
MluNI TGGCCA 1 cut(s) 126
MlyI GAGTC 1 cut(s) 683
MmeI TCCRAC 3 cut(s) 168, 231, 1033
MnlI CCTC 9 cut(s) 15, 47, 67, 211, 215, 349, 545, 619, 1027
Mox20I TGGCCA 1 cut(s) 126
MroXI GAANNNNTTC 3 cut(s) 327, 376, 1047
MscI TGGCCA 1 cut(s) 126
MseI TTAA 4 cut(s) 339, 603, 858, 959
MslI CAYNNNNRTG 2 cut(s) 290, 762
Msp20I TGGCCA 1 cut(s) 126
MspA1I CMGCKG 1 cut(s) 48
MspI CCGG 1 cut(s) 19
MspR9I CCNGG 1 cut(s) 557
MunI CAATTG 1 cut(s) 117
MvaI CCWGG 1 cut(s) 557
MvnI CGCG 1 cut(s) 925
MwoI GCNNNNNNNGC 3 cut(s) 15, 542, 962
NdeI CATATG 1 cut(s) 721
NdeII GATC 3 cut(s) 109, 453, 997
NheI GCTAGC 1 cut(s) 41
NlaIII CATG 3 cut(s) 454, 698, 1021
NlaIV GGNNCC 1 cut(s) 675
NspI RCATGY 1 cut(s) 698
NspV TTCGAA 1 cut(s) 94
PaeR7I CTCGAG 1 cut(s) 549
PagI TCATGA 1 cut(s) 450
PceI AGGCCT 1 cut(s) 555
PciI ACATGT 1 cut(s) 694
PciSI GCTCTTC 1 cut(s) 764
PdmI GAANNNNTTC 3 cut(s) 327, 376, 1047
PfeI GAWTC 5 cut(s) 32, 472, 525, 920, 1048
PflMI CCANNNNNTGG 1 cut(s) 683
PkrI GCNGC 5 cut(s) 47, 50, 547, 733, 955
PleI GAGTC 1 cut(s) 683
PpsI GAGTC 1 cut(s) 683
PscI ACATGT 1 cut(s) 694
Psp6I CCWGG 1 cut(s) 555
PspFI CCCAGC 1 cut(s) 5
PspGI CCWGG 1 cut(s) 555
PspN4I GGNNCC 1 cut(s) 675
PspPI GGNCC 2 cut(s) 198, 674
PspXI VCTCGAGB 1 cut(s) 549
PstNI CAGNNNCTG 1 cut(s) 1001
PsuI RGATCY 1 cut(s) 997
RsaI GTAC 1 cut(s) 798
RsaNI GTAC 1 cut(s) 797
RseI CAYNNNNRTG 2 cut(s) 290, 762
SapI GCTCTTC 1 cut(s) 764
SaqAI TTAA 4 cut(s) 339, 603, 858, 959
SatI GCNGC 5 cut(s) 46, 49, 546, 732, 954
Sau3AI GATC 3 cut(s) 109, 453, 997
Sau96I GGNCC 2 cut(s) 198, 674
SchI GAGTC 1 cut(s) 683
ScrFI CCNGG 1 cut(s) 557
SduI GDGCHC 1 cut(s) 829
Sfr274I CTCGAG 1 cut(s) 549
SfuI TTCGAA 1 cut(s) 94
SinI GGWCC 1 cut(s) 674
SlaI CTCGAG 1 cut(s) 549
SmiMI CAYNNNNRTG 2 cut(s) 290, 762
SmlI CTYRAG 2 cut(s) 148, 549
SmoI CTYRAG 2 cut(s) 148, 549
Sse9I AATT 5 cut(s) 117, 190, 585, 631, 668
SseBI AGGCCT 1 cut(s) 555
SsiI CCGC 3 cut(s) 48, 51, 925
SspMI CTAG 4 cut(s) 42, 437, 705, 989
StuI AGGCCT 1 cut(s) 555
StyD4I CCNGG 1 cut(s) 555
TaaI ACNGT 3 cut(s) 235, 413, 572
TaiI ACGT 2 cut(s) 490, 747
TaqI TCGA 4 cut(s) 94, 550, 831, 918
TasI AATT 5 cut(s) 117, 190, 585, 631, 668
TatI WGTACW 1 cut(s) 796
TauI GCSGC 1 cut(s) 51
TfiI GAWTC 5 cut(s) 32, 472, 525, 920, 1048
Tru1I TTAA 4 cut(s) 339, 603, 858, 959
Tru9I TTAA 4 cut(s) 339, 603, 858, 959
TscAI CASTG 2 cut(s) 16, 292
TseI GCWGC 4 cut(s) 45, 545, 731, 953
TspDTI ATGAA 3 cut(s) 270, 439, 1034
TspGWI ACGGA 1 cut(s) 863
TspRI CASTG 2 cut(s) 16, 292
Van91I CCANNNNNTGG 1 cut(s) 683
VpaK11BI GGWCC 1 cut(s) 674
XapI RAATTY 1 cut(s) 190
XceI RCATGY 1 cut(s) 698
XhoI CTCGAG 1 cut(s) 549
XmiI GTMKAC 1 cut(s) 867
XmnI GAANNNNTTC 3 cut(s) 327, 376, 1047
XspI CTAG 4 cut(s) 42, 437, 705, 989
ZraI GACGTC 1 cut(s) 488
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.