Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0003491

Physical Location & Seq

Genomic Coordinates Reverse (-)

9487815 .. 9490987

Gene Structure 3173 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0110700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1863 bp

ATGAATCCCTCTAATTCAGCTGAGACGGAGATCAGTAGTCCAACATCGGCCTATCATGCCACGATGCTGGAGGAGACCAACGCAGTGTTTTGTTCTGAATGGAATCAGCAGAAATCTACACCGATCAAGAGAAGCTTAAGCGGCATGGATACTAAGGTGTTCAAGGAGGCACGAGATGGAAATATCGATGCCCTTAGAGAACATAATGATCATCTTCACCAAAAATTGACTCCAACCAAAAACACAGTCCTCCATGTCTATATAGCATGCGTAGGCAGTGCAAAGTTGACCAAGTCTGAAGAAGAATTGTTGAAGTCAGCCGAGATTGTAAGGGAGATGCTTCAAATGTCCCAGTGGTTACTGTTGCAGCCAAACGAGAGCGGTGATACTGCGTTACACTTGGCGGCAAGACATGGATGTGCTGACATAGTTGGCGTTCTTATTCAGGCTGCAAAAGACTGGCATGGCGACCTCGAGGAAGGTATCTCATCAAAGGAATCATGCTACCGGTTTCTCATAAGAAGACCTAACGAGGAGAAAAACACAGCCTTGCACGAGGCAGTGCGGTTCAATCACCTTGATGTGGTTAAGATATTGACTAGGGAGGACCCCGATTTTCGGTACTCTGCTAATGATGCTGGTGAAACTCCACTCTACATAGCTGCCGAGAGGGGATATTACGATTTGGTTTCTGAAATACTCCATACTTGCACGAATTCATCTTACCAAGGACCCGTTGGTTTAACAGCTTTACACGCTGCAGCTATCTACAATGATGAACAAATAACGAGAAGATTACTTGAGACGGAAAGGACGCTAGCAATAGCATCTGACGACCGAGGATTGACTCCACTTCATATGGCTGCATATATGGGTCGCGTTTCAATTGTGAAACAAATACTAGAATGTGATAATTCCACTGCCTACATTGTCAACAATTACAAGATGACACCCGTTCATTATGCAGCCATTGCTGGGCATGTAGATGTACTGGTGGAGCTTATTTTCTACTGCCCTGACAGTTTCGAATTGGTGGACCATGAGGGTCGCAATGCCTTGCATTTTGCAATTATCAATGATAAACATGGAGTAGAAGAGTTTGTTCGGAAAGATCCATGGCTTAGTAGCGTCCTTTTAAATGGCAAAGATTCTGTCGGAAACACACCTCTCCATTATATTAGGAATAAACGAGGTTTGATAAAGTCTGGTGCAAGATTAGGTCAACGAGTGTCAAGAGACAAAGATGATGACACGGAAGTCCATGTAAAGAAAGGTGACGAAGACCCTCTATACAAGGAAATAAAAGAATCTCATTTGGTAGTGTCCACACTCATAACAACTGTAGCCTTCGCAGCAGCTTTCACTATGCCTGGTGGTTACCAAAGTGAAAAAGGGCCAGATCAAGGTTTTGCTGTTCTATCAAGAAATGCAGCTTTCAAGGCGTTTGTGATAACAAATACATTAGCCATGAGTATGTCCGCTTGTGCCGTCATGATACGCCTTTTCTCGTCGACGAAAGGGGAGGTTCTTGTATCACAATCATTTGACATCGCTCTATCTCTTACCTCTGATGCAATGCATTATATGTGGATTGCATTCCTTACCGGTACCTACGCAGTATTAGGAGGTCATTCATTAGGACTAGCCATCGCGGTTTGTTGTATTTGCTGCCTTCATCTTGTTTATTTTTATATTGCCGTTTTTCCACGTCACAATCATTTTTGTGGGCGTGGCAATCGCTCAATGCGCATAATCCGCGTATTGAGATATTACTTTTTTCGCAATATCCGTTTTTACAATATGATAAATACTTCAAATCATCATTTGAAGTATAGGTATAACCTAACAATGCCGATGAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009909 GO:0009910 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048519 GO:0048580 GO:0048581 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051239 GO:0051241 GO:0051716 GO:0060089 GO:0060860 GO:0060862 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564 GO:2000026 GO:2000241 GO:2000242

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

620

Amino Acids

69.67

Weight (kDa)

6.64

Isoelectric Point (pI)

42.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ank_2	PF12796	168 - 235	6.8e-10	Ankyrin repeats (3 copies)
Ank_2	PF12796	246 - 303	9.1e-10	Ankyrin repeats (3 copies)
Ank_4	PF13637	251 - 298	3.2e-08	Ankyrin repeats (many copies)
Ank_2	PF12796	278 - 335	7.6e-09	Ankyrin repeats (3 copies)
Ank_2	PF12796	296 - 361	6e-07	Ankyrin repeats (3 copies)
Ank_2	PF12796	320 - 392	7.8e-06	Ankyrin repeats (3 copies)
PGG	PF13962	431 - 540	1.5e-25	Domain of unknown function

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0003491)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35600 AT4G35600
fragaria_vesca	FvH4_1g10470 FvH4_1g10470 FvH4_1g10470 FvH4_1g14300 FvH4_1g14300 FvH4_1g15410 FvH4_1g15410 FvH4_1g15410 FvH4_1g15410
malus_domestica	MD02G1117900.v1.1 MD15G1232600.v1.1
prunus_persica	Prupe.7G181500_v2.0.a1
pyrus_communis	pycom02g09150 pycom15g20700
rosa_chinensis	RchiOBHm_Chr2g0097331 RchiOBHm_Chr2g0102961
rosa_laevigata	RLG00000009020 RLG00000016718 RLG00000017194 RLG00000017335
rosa_multiflora	Rmu_sc0000388.1_g000037 Rmu_sc0001060.1_g000013 Rmu_sc0035636.1_g000001
rosa_roxburghii	Rroxscaffold_2G00144760 Rroxscaffold_5G00347840
rosa_rugosa	Rorug02G0065900 Rorug02G0065900 Rorug02G0110700
rosa_samantha	Rh2CG117400 Rh2CG165600 Rh2DG116600
rosa_wichuraiana	Rw2G008810 Rw2G012430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1256
AbsI	CCTCGAGG	1 cut(s)	473
Acc16I	TGCGCA	1 cut(s)	1748
Acc65I	GGTACC	1 cut(s)	1607
AccB1I	GGYRCC	1 cut(s)	1607
AccBSI	CCGCTC	1 cut(s)	381
AccI	GTMKAC	1 cut(s)	1511
AccII	CGCG	3 cut(s)	879, 1652, 1758
AciI	CCGC	7 cut(s)	141, 381, 404, 565, 1479, 1652, 1756
AclWI	GGATC	1 cut(s)	1106
AcsI	RAATTY	1 cut(s)	715
AcuI	CTGAAG	1 cut(s)	318
AfaI	GTAC	3 cut(s)	623, 990, 1609
AfiI	CCNNNNNNNGG	4 cut(s)	583, 618, 975, 1403
AflII	CTTAAG	1 cut(s)	136
AgeI	ACCGGT	2 cut(s)	507, 1604
AgsI	TTSAA	8 cut(s)	163, 313, 344, 571, 885, 1438, 1815, 1828
AjiI	CACGTC	1 cut(s)	1709
AjnI	CCWGG	1 cut(s)	1369
AluBI	AGCT	8 cut(s)	20, 135, 662, 749, 764, 1000, 1358, 1433
AluI	AGCT	8 cut(s)	20, 135, 662, 749, 764, 1000, 1358, 1433
Alw26I	GTCTC	4 cut(s)	17, 68, 797, 1230
AlwI	GGATC	1 cut(s)	1106
Ama87I	CYCGRG	1 cut(s)	473
AoxI	GGCC	2 cut(s)	48, 1394
ApoI	RAATTY	1 cut(s)	715
ArsI	GACNNNNNNTTYG	4 cut(s)	231, 263, 1137, 1169
AsiGI	ACCGGT	2 cut(s)	507, 1604
Asp718I	GGTACC	1 cut(s)	1607
AspLEI	GCGC	1 cut(s)	1749
AspS9I	GGNCC	4 cut(s)	607, 731, 1036, 1394
AsuHPI	GGTGA	5 cut(s)	209, 395, 566, 653, 1286
AsuII	TTCGAA	1 cut(s)	1026
AsuNHI	GCTAGC	1 cut(s)	817
AvaI	CYCGRG	1 cut(s)	473
AvaII	GGWCC	3 cut(s)	607, 731, 1036
BaeI	ACNNNNGTAYC	2 cut(s)	141, 174
BanI	GGYRCC	1 cut(s)	1607
BauI	CACGAG	2 cut(s)	171, 554
BbsI	GAAGAC	2 cut(s)	529, 1287
BccI	CCATC	2 cut(s)	170, 1655
BceAI	ACGGC	2 cut(s)	1472, 1682
BciT130I	CCWGG	1 cut(s)	1371
BciVI	GTATCC	1 cut(s)	142
BclI	TGATCA	1 cut(s)	208
BcoDI	GTCTC	4 cut(s)	17, 68, 797, 1230
BfaI	CTAG	4 cut(s)	600, 818, 902, 1643
BfmI	CTRYAG	2 cut(s)	759, 1341
BfrI	CTTAAG	1 cut(s)	136
BfuI	GTATCC	1 cut(s)	142
Bme1390I	CCNGG	1 cut(s)	1371
Bme18I	GGWCC	3 cut(s)	607, 731, 1036
BmeT110I	CYCGRG	1 cut(s)	473
BmgBI	CACGTC	1 cut(s)	1709
BmgT120I	GGNCC	4 cut(s)	607, 731, 1036, 1394
BmiI	GGNNCC	3 cut(s)	609, 733, 1609
BmrFI	CCNGG	1 cut(s)	1371
BmrI	ACTGGG	1 cut(s)	346
BmsI	GCATC	6 cut(s)	54, 178, 327, 625, 836, 1561
BmtI	GCTAGC	1 cut(s)	821
BmuI	ACTGGG	1 cut(s)	346
BpiI	GAAGAC	2 cut(s)	529, 1287
BpmI	CTGGAG	1 cut(s)	89
Bpu14I	TTCGAA	1 cut(s)	1026
BpuEI	CTTGAG	1 cut(s)	821
Bsa29I	ATCGAT	1 cut(s)	186
BsaI	GGTCTC	1 cut(s)	68
BsaJI	CCNNGG	3 cut(s)	727, 838, 1115
BsaWI	WCCGGW	2 cut(s)	507, 1604
Bsc4I	CCNNNNNNNGG	4 cut(s)	583, 618, 975, 1403
Bse118I	RCCGGY	2 cut(s)	507, 1604
Bse1I	ACTGG	3 cut(s)	352, 464, 996
Bse3DI	GCAATG	3 cut(s)	969, 1057, 1581
BseBI	CCWGG	1 cut(s)	1371
BseCI	ATCGAT	1 cut(s)	186
BseDI	CCNNGG	3 cut(s)	727, 838, 1115
BseGI	GGATG	1 cut(s)	422
BseLI	CCNNNNNNNGG	4 cut(s)	583, 618, 975, 1403
BseMI	GCAATG	3 cut(s)	969, 1057, 1581
BseMII	CTCAG	1 cut(s)	12
BseNI	ACTGG	3 cut(s)	352, 464, 996
BseRI	GAGGAG	2 cut(s)	86, 548
BseYI	CCCAGC	1 cut(s)	974
Bsh1236I	CGCG	3 cut(s)	879, 1652, 1758
Bsh1285I	CGRYCG	1 cut(s)	838
BshFI	GGCC	2 cut(s)	50, 1396
BshNI	GGYRCC	1 cut(s)	1607
BshTI	ACCGGT	2 cut(s)	507, 1604
BshVI	ATCGAT	1 cut(s)	186
BsiEI	CGRYCG	1 cut(s)	838
BsiHKCI	CYCGRG	1 cut(s)	473
BsiSI	CCGG	2 cut(s)	508, 1605
BslFI	GGGAC	1 cut(s)	334
BslI	CCNNNNNNNGG	4 cut(s)	583, 618, 975, 1403
BsmAI	GTCTC	4 cut(s)	17, 68, 797, 1230
BsmBI	CGTCTC	2 cut(s)	17, 797
BsmFI	GGGAC	1 cut(s)	334
BsmI	GAATGC	1 cut(s)	1595
BsnI	GGCC	2 cut(s)	50, 1396
Bso31I	GGTCTC	1 cut(s)	68
BsoBI	CYCGRG	1 cut(s)	473
Bsp119I	TTCGAA	1 cut(s)	1026
Bsp143I	GATC	5 cut(s)	30, 123, 208, 1111, 1399
Bsp19I	CCATGG	1 cut(s)	1115
BspACI	CCGC	7 cut(s)	141, 381, 404, 565, 1479, 1652, 1756
BspANI	GGCC	2 cut(s)	50, 1396
BspCNI	CTCAG	1 cut(s)	13
BspDI	ATCGAT	1 cut(s)	186
BspFNI	CGCG	3 cut(s)	879, 1652, 1758
BspHI	TCATGA	1 cut(s)	1491
BspLI	GGNNCC	3 cut(s)	609, 733, 1609
BspMAI	CTGCAG	1 cut(s)	763
BspOI	GCTAGC	1 cut(s)	821
BspPI	GGATC	1 cut(s)	1106
BspT104I	TTCGAA	1 cut(s)	1026
BspT107I	GGYRCC	1 cut(s)	1607
BspTI	CTTAAG	1 cut(s)	136
BspTNI	GGTCTC	1 cut(s)	68
BsrBI	CCGCTC	1 cut(s)	381
BsrDI	GCAATG	3 cut(s)	969, 1057, 1581
BsrFI	RCCGGY	2 cut(s)	507, 1604
BsrI	ACTGG	3 cut(s)	352, 464, 996
BssAI	RCCGGY	2 cut(s)	507, 1604
BssECI	CCNNGG	3 cut(s)	727, 838, 1115
BssMI	GATC	5 cut(s)	30, 123, 208, 1111, 1399
BssSI	CACGAG	2 cut(s)	171, 554
BssT1I	CCWWGG	2 cut(s)	727, 1115
Bst2BI	CACGAG	2 cut(s)	171, 554
Bst2UI	CCWGG	1 cut(s)	1371
Bst4CI	ACNGT	4 cut(s)	247, 363, 1022, 1342
Bst6I	CTCTTC	1 cut(s)	1089
BstAFI	CTTAAG	1 cut(s)	136
BstAPI	GCANNNNNTGC	1 cut(s)	971
BstBI	TTCGAA	1 cut(s)	1026
BstC8I	GCNNGC	2 cut(s)	268, 819
BstDEI	CTNAG	4 cut(s)	21, 153, 194, 1121
BstDSI	CCRYGG	1 cut(s)	1115
BstEII	GGTNACC	1 cut(s)	1376
BstF5I	GGATG	1 cut(s)	422
BstFNI	CGCG	3 cut(s)	879, 1652, 1758
BstHHI	GCGC	1 cut(s)	1749
BstKTI	GATC	5 cut(s)	33, 126, 211, 1114, 1402
BstMAI	GTCTC	4 cut(s)	17, 68, 797, 1230
BstMBI	GATC	5 cut(s)	30, 123, 208, 1111, 1399
BstMCI	CGRYCG	1 cut(s)	838
BstMWI	GCNNNNNNNGC	9 cut(s)	56, 141, 635, 755, 971, 1352, 1439, 1746, 1755
BstNI	CCWGG	1 cut(s)	1371
BstNSI	RCATGY	2 cut(s)	270, 983
BstPI	GGTNACC	1 cut(s)	1376
BstSCI	CCNGG	1 cut(s)	1369
BstSFI	CTRYAG	2 cut(s)	759, 1341
BstUI	CGCG	3 cut(s)	879, 1652, 1758
BstV2I	GAAGAC	2 cut(s)	529, 1287
BstX2I	RGATCY	1 cut(s)	1111
BstXI	CCANNNNNNTGG	1 cut(s)	67
BstYI	RGATCY	1 cut(s)	1111
Bsu15I	ATCGAT	1 cut(s)	186
BsuI	GTATCC	1 cut(s)	142
BsuRI	GGCC	2 cut(s)	50, 1396
BsuTUI	ATCGAT	1 cut(s)	186
BtgI	CCRYGG	1 cut(s)	1115
BtgZI	GCGATG	2 cut(s)	1534, 1633
BtrI	CACGTC	1 cut(s)	1709
BtsCI	GGATG	1 cut(s)	422
BtsI	GCAGTG	4 cut(s)	90, 283, 567, 918
BtsIMutI	CAGTG	5 cut(s)	90, 283, 359, 567, 918
Cac8I	GCNNGC	2 cut(s)	268, 819
CciI	TCATGA	1 cut(s)	1491
CfoI	GCGC	1 cut(s)	1749
Cfr10I	RCCGGY	2 cut(s)	507, 1604
Cfr13I	GGNCC	4 cut(s)	607, 731, 1036, 1394
ClaI	ATCGAT	1 cut(s)	186
CseI	GACGC	2 cut(s)	823, 1117
Csp6I	GTAC	3 cut(s)	622, 989, 1608
CspAI	ACCGGT	2 cut(s)	507, 1604
CviQI	GTAC	3 cut(s)	622, 989, 1608
DdeI	CTNAG	4 cut(s)	21, 153, 194, 1121
DpnI	GATC	5 cut(s)	32, 125, 210, 1113, 1401
DpnII	GATC	5 cut(s)	30, 123, 208, 1111, 1399
DraI	TTTAAA	1 cut(s)	1137
DrdI	GACNNNNNNGTC	1 cut(s)	1256
DseDI	GACNNNNNNGTC	1 cut(s)	1256
Eam1104I	CTCTTC	1 cut(s)	1089
EarI	CTCTTC	1 cut(s)	1089
Eco130I	CCWWGG	2 cut(s)	727, 1115
Eco31I	GGTCTC	1 cut(s)	68
Eco47I	GGWCC	3 cut(s)	607, 731, 1036
Eco57I	CTGAAG	1 cut(s)	318
Eco88I	CYCGRG	1 cut(s)	473
Eco91I	GGTNACC	1 cut(s)	1376
EcoO109I	RGGNCCY	2 cut(s)	607, 731
EcoO65I	GGTNACC	1 cut(s)	1376
EcoRI	GAATTC	1 cut(s)	715
EcoRII	CCWGG	1 cut(s)	1369
EcoT14I	CCWWGG	2 cut(s)	727, 1115
EcoT22I	ATGCAT	1 cut(s)	1581
ErhI	CCWWGG	2 cut(s)	727, 1115
Esp3I	CGTCTC	2 cut(s)	17, 797
FalI	AAGNNNNNCTT	2 cut(s)	119, 151
FaqI	GGGAC	1 cut(s)	334
FauNDI	CATATG	1 cut(s)	858
FbaI	TGATCA	1 cut(s)	208
FblI	GTMKAC	1 cut(s)	1511
FokI	GGATG	1 cut(s)	429
FspAI	RTGCGCAY	1 cut(s)	1748
FspBI	CTAG	4 cut(s)	600, 818, 902, 1643
FspI	TGCGCA	1 cut(s)	1748
GlaI	GCGC	1 cut(s)	1748
GsaI	CCCAGC	1 cut(s)	978
GsuI	CTGGAG	1 cut(s)	89
HaeIII	GGCC	2 cut(s)	50, 1396
HapII	CCGG	2 cut(s)	508, 1605
HgaI	GACGC	2 cut(s)	823, 1117
HhaI	GCGC	1 cut(s)	1749
Hin6I	GCGC	1 cut(s)	1747
HinP1I	GCGC	1 cut(s)	1747
HincII	GTYRAC	4 cut(s)	288, 934, 1223, 1512
HindII	GTYRAC	4 cut(s)	288, 934, 1223, 1512
HindIII	AAGCTT	1 cut(s)	133
HinfI	GANTC	7 cut(s)	4, 103, 229, 497, 847, 1148, 1307
HpaII	CCGG	2 cut(s)	508, 1605
HphI	GGTGA	5 cut(s)	209, 395, 566, 653, 1286
Hpy166II	GTNNAC	6 cut(s)	288, 934, 1036, 1223, 1326, 1512
Hpy188I	TCNGA	7 cut(s)	97, 298, 694, 832, 1107, 1157, 1570
Hpy188III	TCNNGA	4 cut(s)	127, 1233, 1422, 1492
Hpy8I	GTNNAC	6 cut(s)	288, 934, 1036, 1223, 1326, 1512
Hpy99I	CGWCG	2 cut(s)	1513, 1516
HpyAV	CCTTC	3 cut(s)	473, 1357, 1682
HpyCH4III	ACNGT	4 cut(s)	247, 363, 1022, 1342
HpyCH4IV	ACGT	1 cut(s)	1708
HpyF10VI	GCNNNNNNNGC	9 cut(s)	56, 141, 635, 755, 971, 1352, 1439, 1746, 1755
HpyF3I	CTNAG	4 cut(s)	21, 153, 194, 1121
HpySE526I	ACGT	1 cut(s)	1708
HspAI	GCGC	1 cut(s)	1747
KpnI	GGTACC	1 cut(s)	1611
Ksp22I	TGATCA	1 cut(s)	208
Kzo9I	GATC	5 cut(s)	30, 123, 208, 1111, 1399
LmnI	GCTCC	1 cut(s)	997
LweI	GCATC	6 cut(s)	54, 178, 327, 625, 836, 1561
MaeI	CTAG	4 cut(s)	600, 818, 902, 1643
MaeII	ACGT	1 cut(s)	1708
MaeIII	GTNAC	5 cut(s)	357, 393, 1274, 1376, 1709
MalI	GATC	5 cut(s)	32, 125, 210, 1113, 1401
MbiI	CCGCTC	1 cut(s)	381
MboI	GATC	5 cut(s)	30, 123, 208, 1111, 1399
MboII	GAAGA	7 cut(s)	206, 311, 314, 534, 804, 1106, 1292
MfeI	CAATTG	1 cut(s)	885
MflI	RGATCY	1 cut(s)	1111
MluCI	AATT	9 cut(s)	13, 224, 305, 715, 885, 913, 937, 1028, 1068
MlyI	GAGTC	2 cut(s)	223, 841
MmeI	TCCRAC	3 cut(s)	65, 257, 1135
Mph1103I	ATGCAT	1 cut(s)	1581
MseI	TTAA	4 cut(s)	137, 588, 743, 1136
MslI	CAYNNNNRTG	5 cut(s)	417, 579, 984, 1472, 1722
MspA1I	CMGCKG	1 cut(s)	20
MspCI	CTTAAG	1 cut(s)	136
MspI	CCGG	2 cut(s)	508, 1605
MspR9I	CCNGG	1 cut(s)	1371
MunI	CAATTG	1 cut(s)	885
Mva1269I	GAATGC	1 cut(s)	1595
MvaI	CCWGG	1 cut(s)	1371
MvnI	CGCG	3 cut(s)	879, 1652, 1758
MwoI	GCNNNNNNNGC	9 cut(s)	56, 141, 635, 755, 971, 1352, 1439, 1746, 1755
NcoI	CCATGG	1 cut(s)	1115
NdeI	CATATG	1 cut(s)	858
NdeII	GATC	5 cut(s)	30, 123, 208, 1111, 1399
NheI	GCTAGC	1 cut(s)	817
NlaIV	GGNNCC	3 cut(s)	609, 733, 1609
NmeAIII	GCCGAG	2 cut(s)	346, 691
NmuCI	GTSAC	2 cut(s)	1274, 1709
NsbI	TGCGCA	1 cut(s)	1748
NsiI	ATGCAT	1 cut(s)	1581
NspI	RCATGY	2 cut(s)	270, 983
NspV	TTCGAA	1 cut(s)	1026
PaeI	GCATGC	1 cut(s)	270
PaeR7I	CTCGAG	1 cut(s)	473
PagI	TCATGA	1 cut(s)	1491
PcsI	WCGNNNNNNNCGW	1 cut(s)	1786
PctI	GAATGC	1 cut(s)	1595
PfeI	GAWTC	5 cut(s)	4, 103, 497, 1148, 1307
PflFI	GACNNNGTC	1 cut(s)	292
PinAI	ACCGGT	2 cut(s)	507, 1604
PleI	GAGTC	2 cut(s)	223, 841
PpsI	GAGTC	2 cut(s)	223, 841
PpuMI	RGGWCCY	2 cut(s)	607, 731
Psp5II	RGGWCCY	2 cut(s)	607, 731
Psp6I	CCWGG	1 cut(s)	1369
PspEI	GGTNACC	1 cut(s)	1376
PspFI	CCCAGC	1 cut(s)	974
PspGI	CCWGG	1 cut(s)	1369
PspN4I	GGNNCC	3 cut(s)	609, 733, 1609
PspPI	GGNCC	4 cut(s)	607, 731, 1036, 1394
PspPPI	RGGWCCY	2 cut(s)	607, 731
PspXI	VCTCGAGB	1 cut(s)	473
PstI	CTGCAG	1 cut(s)	763
PsuI	RGATCY	1 cut(s)	1111
PsyI	GACNNNGTC	1 cut(s)	292
PvuII	CAGCTG	1 cut(s)	20
RsaI	GTAC	3 cut(s)	623, 990, 1609
RsaNI	GTAC	3 cut(s)	622, 989, 1608
RseI	CAYNNNNRTG	5 cut(s)	417, 579, 984, 1472, 1722
SalI	GTCGAC	1 cut(s)	1510
SaqAI	TTAA	4 cut(s)	137, 588, 743, 1136
Sau3AI	GATC	5 cut(s)	30, 123, 208, 1111, 1399
Sau96I	GGNCC	4 cut(s)	607, 731, 1036, 1394
SchI	GAGTC	2 cut(s)	223, 841
ScrFI	CCNGG	1 cut(s)	1371
SfaNI	GCATC	6 cut(s)	54, 178, 327, 625, 836, 1561
SfcI	CTRYAG	2 cut(s)	759, 1341
Sfr274I	CTCGAG	1 cut(s)	473
SfuI	TTCGAA	1 cut(s)	1026
SgrDI	CGTCGACG	1 cut(s)	1510
SinI	GGWCC	3 cut(s)	607, 731, 1036
SlaI	CTCGAG	1 cut(s)	473
SmiMI	CAYNNNNRTG	5 cut(s)	417, 579, 984, 1472, 1722
SmlI	CTYRAG	3 cut(s)	136, 473, 800
SmoI	CTYRAG	3 cut(s)	136, 473, 800
SphI	GCATGC	1 cut(s)	270
Sse9I	AATT	9 cut(s)	13, 224, 305, 715, 885, 913, 937, 1028, 1068
SsiI	CCGC	7 cut(s)	141, 381, 404, 565, 1479, 1652, 1756
SspMI	CTAG	4 cut(s)	600, 818, 902, 1643
StyD4I	CCNGG	1 cut(s)	1369
StyI	CCWWGG	2 cut(s)	727, 1115
TaaI	ACNGT	4 cut(s)	247, 363, 1022, 1342
TaiI	ACGT	1 cut(s)	1711
TaqI	TCGA	4 cut(s)	186, 474, 1026, 1511
TaqII	GACCGA	1 cut(s)	852
TasI	AATT	9 cut(s)	13, 224, 305, 715, 885, 913, 937, 1028, 1068
TatI	WGTACW	1 cut(s)	988
TauI	GCSGC	2 cut(s)	144, 407
TfiI	GAWTC	5 cut(s)	4, 103, 497, 1148, 1307
Tru1I	TTAA	4 cut(s)	137, 588, 743, 1136
Tru9I	TTAA	4 cut(s)	137, 588, 743, 1136
TscAI	CASTG	5 cut(s)	90, 283, 359, 567, 925
TseFI	GTSAC	2 cut(s)	1274, 1709
Tsp45I	GTSAC	2 cut(s)	1274, 1709
TspDTI	ATGAA	7 cut(s)	17, 708, 792, 845, 947, 1623, 1664
TspGWI	ACGGA	4 cut(s)	41, 821, 1268, 1778
TspRI	CASTG	5 cut(s)	90, 283, 359, 567, 925
Tth111I	GACNNNGTC	1 cut(s)	292
Vha464I	CTTAAG	1 cut(s)	136
VpaK11BI	GGWCC	3 cut(s)	607, 731, 1036
XapI	RAATTY	1 cut(s)	715
XceI	RCATGY	2 cut(s)	270, 983
XcmI	CCANNNNNNNNNTGG	1 cut(s)	734
XhoI	CTCGAG	1 cut(s)	473
XmiI	GTMKAC	1 cut(s)	1511
XspI	CTAG	4 cut(s)	600, 818, 902, 1643
Zsp2I	ATGCAT	1 cut(s)	1581

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.