Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0003491

Physical Location & Seq

Genomic Coordinates Reverse (-)

17721518 .. 17724979

Gene Structure 3462 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G181500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1245 bp

ATGGGTATTTGCTGGACATCTCCTGCTTCTCCTCCTGATCCTCATCCTAACACCAACATATCATCAACTACAGGGACATCTGGAAATCACAGCAGCGGCAGAAACATATTTTCAAACACAAGCAGCAGTGCAGGAAGAAGTCAATTTTCAGAGGCATCAAGCCCAAGAATGGAAGAGCCACAGCAAACCAATGGGCAGATTTTGGACTCACCCAACTTGAGATTTTTCACTTTTGCAGAGATGAAGGCTGCCACTAGGAATTTCAAGTCAGATGCAGTGCTGGGTGAGGGAGGGTTTGGGAGAGTTTTCAAAGGTTGGGTGGATGAGAAAACACTTGCACCTTCTAAGGTTGGCATCGGAATGATGGTTGCTATCAAGAAATTGAACCCAGAAAGTGTGCAAGGTTTTCAAGAGTGGCAGTCAGAGGTGAACTTTCTAGGAAGGCTTTCTCATCCAAACCTTGTCAAGCTATTAGGATACTGTTGGGACGACAAGGAGCTTCTCCTTGTTTATGAGTTCATGCAGAAAGGAAGTTTGGAGAATCATCTTTTCAGAAGGAGCGCGGGGATTGAACCACTATCTTGGGACAGAAGGCTAAAAATAGCTATCGGAGCAGCTCGGGGCCTAGCCTTCTTACACGGTTCAGAAAAACAAATCATATACAGAGATTTCAAGGCCTCAAATATACTGCTTGATGGGAATTTCAATGCAAAAATTTCAGATTTTGGATTGGCGAAATTGGGGCCGGCTGGTGGAGAGTCACATGTTTCGACTAGGATTATGGGCACCTATGGCTATGCTGCTCCAGAGTACATTGCAACAGGTCATTTGTATGTGAAGAGCGATGTGTATGGCTTTGGAGTTGTGTTGCTTGAAATTCTGACAGGGTTACGAGCACTTGATATGAAGCGCCCTAAGGAGCAACAACAACTGGTAGAGTGGGCTAAACCACTTCTCCTTCATAAAAGAAAGCTGAAAAACATTCTGGATGTGCGGATGGAAGGTCAATATGCCTTCAAGGCAGCATTACAAGCAGCACAGATTACTCAAAAGTGCCTAGCACCGGATCCTAAAAGCCGGCCCTCCATGAAAGAAGTTGTGGAGGAATTGGAAAAGATTCAAGCAATCAAGGAGAAGCAAAAGCAATCCAGACTTGCATCTGCACAACCTACTTTTAGTTTTGGAAGCAATAAACAGTCTGTTCATCGGTCTCCGCTTCACGTTAGGTATCATGGCACTGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009909 GO:0009910 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048519 GO:0048580 GO:0048581 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051239 GO:0051241 GO:0051716 GO:0060089 GO:0060860 GO:0060862 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564 GO:2000026 GO:2000241 GO:2000242

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

415

Amino Acids

45.96

Weight (kDa)

9.49

Isoelectric Point (pI)

44.89

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003491)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35600 AT4G35600
fragaria_vesca	FvH4_1g10470 FvH4_1g10470 FvH4_1g10470 FvH4_1g14300 FvH4_1g14300 FvH4_1g15410 FvH4_1g15410 FvH4_1g15410 FvH4_1g15410
malus_domestica	MD02G1117900.v1.1 MD15G1232600.v1.1
prunus_persica	Prupe.7G181500_v2.0.a1
pyrus_communis	pycom02g09150 pycom15g20700
rosa_chinensis	RchiOBHm_Chr2g0097331 RchiOBHm_Chr2g0102961
rosa_laevigata	RLG00000009020 RLG00000016718 RLG00000017194 RLG00000017335
rosa_multiflora	Rmu_sc0000388.1_g000037 Rmu_sc0001060.1_g000013 Rmu_sc0035636.1_g000001
rosa_roxburghii	Rroxscaffold_2G00144760 Rroxscaffold_5G00347840
rosa_rugosa	Rorug02G0065900 Rorug02G0065900 Rorug02G0110700
rosa_samantha	Rh2CG117400 Rh2CG165600 Rh2DG116600
rosa_wichuraiana	Rw2G008810 Rw2G012430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	785
AccII	CGCG	1 cut(s)	563
AciI	CCGC	4 cut(s)	96, 563, 994, 1214
AclWI	GGATC	3 cut(s)	32, 1061, 1074
AcsI	RAATTY	4 cut(s)	259, 700, 714, 876
AfaI	GTAC	1 cut(s)	812
AfiI	CCNNNNNNNGG	3 cut(s)	169, 752, 1063
AflIII	ACRYGT	1 cut(s)	763
AjuI	GAANNNNNNNTTGG	2 cut(s)	518, 550
AluBI	AGCT	5 cut(s)	469, 499, 605, 617, 973
AluI	AGCT	5 cut(s)	469, 499, 605, 617, 973
Alw21I	GWGCWC	1 cut(s)	898
Alw26I	GTCTC	1 cut(s)	1215
AlwI	GGATC	3 cut(s)	32, 1061, 1074
Ama87I	CYCGRG	1 cut(s)	618
AoxI	GGCC	4 cut(s)	622, 675, 743, 1079
ApeKI	GCWGC	7 cut(s)	93, 123, 248, 614, 800, 1022, 1034
ApoI	RAATTY	4 cut(s)	259, 700, 714, 876
Asp700I	GAANNNNTTC	2 cut(s)	445, 1116
AspLEI	GCGC	2 cut(s)	563, 912
AspS9I	GGNCC	3 cut(s)	622, 743, 1080
AsuHPI	GGTGA	3 cut(s)	201, 296, 439
AvaI	CYCGRG	1 cut(s)	618
AxyI	CCTNAGG	1 cut(s)	915
BaeGI	GKGCMC	1 cut(s)	788
BamHI	GGATCC	1 cut(s)	1066
BanI	GGYRCC	1 cut(s)	785
Bbv12I	GWGCWC	1 cut(s)	898
BbvI	GCAGC	7 cut(s)	105, 135, 235, 626, 787, 1034, 1046
BccI	CCATC	3 cut(s)	358, 689, 991
BciVI	GTATCC	1 cut(s)	470
BcoDI	GTCTC	1 cut(s)	1215
BfaI	CTAG	5 cut(s)	255, 437, 626, 774, 1058
BfmI	CTRYAG	1 cut(s)	69
BfoI	RGCGCY	1 cut(s)	913
BfuI	GTATCC	1 cut(s)	470
BglI	GCCNNNNNGGC	1 cut(s)	1019
BisI	GCNGC	8 cut(s)	94, 97, 124, 249, 615, 801, 1023, 1035
BlsI	GCNGC	8 cut(s)	95, 98, 125, 250, 616, 802, 1024, 1036
BmeT110I	CYCGRG	1 cut(s)	618
BmgT120I	GGNCC	3 cut(s)	622, 743, 1080
BmiI	GGNNCC	4 cut(s)	623, 744, 787, 1068
BmsI	GCATC	4 cut(s)	164, 262, 363, 1166
BpmI	CTGGAG	1 cut(s)	789
BpuEI	CTTGAG	1 cut(s)	238
BsaBI	GATNNNNATC	1 cut(s)	42
BsaI	GGTCTC	1 cut(s)	1215
BsaWI	WCCGGW	1 cut(s)	1063
BsaXI	ACNNNNNCTCC	2 cut(s)	939, 969
Bsc4I	CCNNNNNNNGG	3 cut(s)	169, 752, 1063
Bse118I	RCCGGY	2 cut(s)	745, 1077
Bse1I	ACTGG	1 cut(s)	936
Bse21I	CCTNAGG	1 cut(s)	915
Bse3DI	GCAATG	1 cut(s)	813
Bse8I	GATNNNNATC	1 cut(s)	42
BseGI	GGATG	5 cut(s)	43, 328, 451, 994, 1002
BseJI	GATNNNNATC	1 cut(s)	42
BseLI	CCNNNNNNNGG	3 cut(s)	169, 752, 1063
BseMI	GCAATG	1 cut(s)	813
BseMII	CTCAG	1 cut(s)	1230
BseNI	ACTGG	1 cut(s)	936
BseRI	GAGGAG	1 cut(s)	21
BseSI	GKGCMC	1 cut(s)	788
BseXI	GCAGC	7 cut(s)	105, 135, 235, 626, 787, 1034, 1046
BseYI	CCCAGC	1 cut(s)	280
BsgI	GTGCAG	2 cut(s)	150, 1146
Bsh1236I	CGCG	1 cut(s)	563
BshFI	GGCC	4 cut(s)	624, 677, 745, 1081
BshNI	GGYRCC	1 cut(s)	785
BsiHKAI	GWGCWC	1 cut(s)	898
BsiHKCI	CYCGRG	1 cut(s)	618
BsiSI	CCGG	3 cut(s)	746, 1064, 1078
BslFI	GGGAC	3 cut(s)	88, 500, 599
BslI	CCNNNNNNNGG	3 cut(s)	169, 752, 1063
BsmAI	GTCTC	1 cut(s)	1215
BsmFI	GGGAC	3 cut(s)	88, 500, 599
BsnI	GGCC	4 cut(s)	624, 677, 745, 1081
Bso31I	GGTCTC	1 cut(s)	1215
BsoBI	CYCGRG	1 cut(s)	618
Bsp1286I	GDGCHC	2 cut(s)	788, 898
Bsp143I	GATC	2 cut(s)	37, 1066
BspACI	CCGC	4 cut(s)	96, 563, 994, 1214
BspANI	GGCC	4 cut(s)	624, 677, 745, 1081
BspCNI	CTCAG	1 cut(s)	1231
BspFNI	CGCG	1 cut(s)	563
BspLI	GGNNCC	4 cut(s)	623, 744, 787, 1068
BspPI	GGATC	3 cut(s)	32, 1061, 1074
BspQI	GCTCTTC	2 cut(s)	168, 833
BspT107I	GGYRCC	1 cut(s)	785
BspTNI	GGTCTC	1 cut(s)	1215
BsrDI	GCAATG	1 cut(s)	813
BsrFI	RCCGGY	2 cut(s)	745, 1077
BsrI	ACTGG	1 cut(s)	936
BssAI	RCCGGY	2 cut(s)	745, 1077
BssMI	GATC	2 cut(s)	37, 1066
Bst4CI	ACNGT	3 cut(s)	482, 641, 1197
Bst6I	CTCTTC	2 cut(s)	168, 833
BstC8I	GCNNGC	2 cut(s)	747, 1079
BstDEI	CTNAG	3 cut(s)	345, 915, 1239
BstF5I	GGATG	5 cut(s)	43, 328, 451, 994, 1002
BstFNI	CGCG	1 cut(s)	563
BstH2I	RGCGCY	1 cut(s)	913
BstHHI	GCGC	2 cut(s)	563, 912
BstKTI	GATC	2 cut(s)	40, 1069
BstMAI	GTCTC	1 cut(s)	1215
BstMBI	GATC	2 cut(s)	37, 1066
BstMWI	GCNNNNNNNGC	4 cut(s)	611, 792, 1019, 1031
BstNSI	RCATGY	1 cut(s)	767
BstSFI	CTRYAG	1 cut(s)	69
BstSLI	GKGCMC	1 cut(s)	788
BstUI	CGCG	1 cut(s)	563
BstV1I	GCAGC	7 cut(s)	105, 135, 235, 626, 787, 1034, 1046
BstX2I	RGATCY	1 cut(s)	1066
BstXI	CCANNNNNNTGG	1 cut(s)	582
BstYI	RGATCY	1 cut(s)	1066
Bsu36I	CCTNAGG	1 cut(s)	915
BsuI	GTATCC	1 cut(s)	470
BsuRI	GGCC	4 cut(s)	624, 677, 745, 1081
BtgZI	GCGATG	1 cut(s)	858
BtsCI	GGATG	5 cut(s)	43, 328, 451, 994, 1002
BtsI	GCAGTG	2 cut(s)	133, 282
BtsIMutI	CAGTG	3 cut(s)	133, 282, 1236
Cac8I	GCNNGC	2 cut(s)	747, 1079
CfoI	GCGC	2 cut(s)	563, 912
Cfr10I	RCCGGY	2 cut(s)	745, 1077
Cfr13I	GGNCC	3 cut(s)	622, 743, 1080
Csp6I	GTAC	1 cut(s)	811
CviAII	CATG	4 cut(s)	520, 764, 1087, 1232
CviQI	GTAC	1 cut(s)	811
DdeI	CTNAG	3 cut(s)	345, 915, 1239
DpnI	GATC	2 cut(s)	39, 1068
DpnII	GATC	2 cut(s)	37, 1066
Eam1104I	CTCTTC	2 cut(s)	168, 833
EarI	CTCTTC	2 cut(s)	168, 833
Eco147I	AGGCCT	1 cut(s)	677
Eco31I	GGTCTC	1 cut(s)	1215
Eco81I	CCTNAGG	1 cut(s)	915
Eco88I	CYCGRG	1 cut(s)	618
EcoO109I	RGGNCCY	1 cut(s)	622
FaeI	CATG	4 cut(s)	523, 767, 1090, 1235
FaqI	GGGAC	3 cut(s)	88, 500, 599
FatI	CATG	4 cut(s)	519, 763, 1086, 1231
FauI	CCCGC	1 cut(s)	556
Fnu4HI	GCNGC	8 cut(s)	94, 97, 124, 249, 615, 801, 1023, 1035
FokI	GGATG	5 cut(s)	30, 335, 438, 1001, 1009
Fsp4HI	GCNGC	8 cut(s)	94, 97, 124, 249, 615, 801, 1023, 1035
FspBI	CTAG	5 cut(s)	255, 437, 626, 774, 1058
GlaI	GCGC	2 cut(s)	562, 911
GluI	GCNGC	8 cut(s)	94, 97, 124, 249, 615, 801, 1023, 1035
GsaI	CCCAGC	1 cut(s)	284
GsuI	CTGGAG	1 cut(s)	789
HaeII	RGCGCY	1 cut(s)	913
HaeIII	GGCC	4 cut(s)	624, 677, 745, 1081
HapII	CCGG	3 cut(s)	746, 1064, 1078
HhaI	GCGC	2 cut(s)	563, 912
Hin1II	CATG	4 cut(s)	523, 767, 1090, 1235
Hin6I	GCGC	2 cut(s)	561, 910
HinP1I	GCGC	2 cut(s)	561, 910
HinfI	GANTC	4 cut(s)	206, 541, 758, 1117
HpaII	CCGG	3 cut(s)	746, 1064, 1078
HphI	GGTGA	3 cut(s)	201, 296, 439
Hpy166II	GTNNAC	1 cut(s)	430
Hpy188I	TCNGA	9 cut(s)	151, 271, 359, 424, 554, 611, 646, 721, 882
Hpy188III	TCNNGA	7 cut(s)	35, 81, 376, 410, 806, 986, 1149
Hpy8I	GTNNAC	1 cut(s)	430
HpyAV	CCTTC	9 cut(s)	238, 351, 435, 549, 585, 640, 968, 995, 1024
HpyCH4III	ACNGT	3 cut(s)	482, 641, 1197
HpyCH4IV	ACGT	1 cut(s)	1221
HpyF10VI	GCNNNNNNNGC	4 cut(s)	611, 792, 1019, 1031
HpyF3I	CTNAG	3 cut(s)	345, 915, 1239
HpySE526I	ACGT	1 cut(s)	1221
Hsp92II	CATG	4 cut(s)	523, 767, 1090, 1235
HspAI	GCGC	2 cut(s)	561, 910
KroI	GCCGGC	2 cut(s)	745, 1077
KroNI	GCCGGC	2 cut(s)	747, 1079
Kzo9I	GATC	2 cut(s)	37, 1066
LguI	GCTCTTC	2 cut(s)	168, 833
LmnI	GCTCC	5 cut(s)	496, 558, 611, 808, 919
Lsp1109I	GCAGC	7 cut(s)	105, 135, 235, 626, 787, 1034, 1046
LweI	GCATC	4 cut(s)	164, 262, 363, 1166
MaeI	CTAG	5 cut(s)	255, 437, 626, 774, 1058
MaeII	ACGT	1 cut(s)	1221
MaeIII	GTNAC	2 cut(s)	759, 888
MalI	GATC	2 cut(s)	39, 1068
MboI	GATC	2 cut(s)	37, 1066
MboII	GAAGA	3 cut(s)	147, 185, 850
MflI	RGATCY	1 cut(s)	1066
MhlI	GDGCHC	2 cut(s)	788, 898
MluCI	AATT	8 cut(s)	143, 259, 380, 700, 714, 737, 876, 1106
MlyI	GAGTC	2 cut(s)	200, 767
MnlI	CCTC	9 cut(s)	42, 51, 145, 280, 284, 418, 688, 1093, 1096
MroNI	GCCGGC	2 cut(s)	745, 1077
MroXI	GAANNNNTTC	2 cut(s)	445, 1116
MslI	CAYNNNNRTG	2 cut(s)	359, 831
MspA1I	CMGCKG	1 cut(s)	96
MspI	CCGG	3 cut(s)	746, 1064, 1078
MvnI	CGCG	1 cut(s)	563
MwoI	GCNNNNNNNGC	4 cut(s)	611, 792, 1019, 1031
NaeI	GCCGGC	2 cut(s)	747, 1079
NdeII	GATC	2 cut(s)	37, 1066
NgoMIV	GCCGGC	2 cut(s)	745, 1077
NlaIII	CATG	4 cut(s)	523, 767, 1090, 1235
NlaIV	GGNNCC	4 cut(s)	623, 744, 787, 1068
NmuCI	GTSAC	1 cut(s)	759
NspI	RCATGY	1 cut(s)	767
PceI	AGGCCT	1 cut(s)	677
PciI	ACATGT	1 cut(s)	763
PciSI	GCTCTTC	2 cut(s)	168, 833
PdiI	GCCGGC	2 cut(s)	747, 1079
PdmI	GAANNNNTTC	2 cut(s)	445, 1116
PfeI	GAWTC	2 cut(s)	541, 1117
PkrI	GCNGC	8 cut(s)	95, 98, 125, 250, 616, 802, 1024, 1036
PleI	GAGTC	2 cut(s)	200, 766
PpsI	GAGTC	2 cut(s)	200, 766
PscI	ACATGT	1 cut(s)	763
PspFI	CCCAGC	1 cut(s)	280
PspN4I	GGNNCC	4 cut(s)	623, 744, 787, 1068
PspPI	GGNCC	3 cut(s)	622, 743, 1080
PsuI	RGATCY	1 cut(s)	1066
RsaI	GTAC	1 cut(s)	812
RsaNI	GTAC	1 cut(s)	811
RseI	CAYNNNNRTG	2 cut(s)	359, 831
SapI	GCTCTTC	2 cut(s)	168, 833
SatI	GCNGC	8 cut(s)	94, 97, 124, 249, 615, 801, 1023, 1035
Sau3AI	GATC	2 cut(s)	37, 1066
Sau96I	GGNCC	3 cut(s)	622, 743, 1080
SchI	GAGTC	2 cut(s)	200, 767
SduI	GDGCHC	2 cut(s)	788, 898
SfaNI	GCATC	4 cut(s)	164, 262, 363, 1166
SfcI	CTRYAG	1 cut(s)	69
SmiMI	CAYNNNNRTG	2 cut(s)	359, 831
SmlI	CTYRAG	1 cut(s)	217
SmoI	CTYRAG	1 cut(s)	217
Sse9I	AATT	8 cut(s)	143, 259, 380, 700, 714, 737, 876, 1106
SseBI	AGGCCT	1 cut(s)	677
SsiI	CCGC	4 cut(s)	96, 563, 994, 1214
SspMI	CTAG	5 cut(s)	255, 437, 626, 774, 1058
StuI	AGGCCT	1 cut(s)	677
TaaI	ACNGT	3 cut(s)	482, 641, 1197
TaiI	ACGT	1 cut(s)	1224
TaqI	TCGA	1 cut(s)	770
TaqII	GACCGA	1 cut(s)	1197
TasI	AATT	8 cut(s)	143, 259, 380, 700, 714, 737, 876, 1106
TatI	WGTACW	1 cut(s)	810
TauI	GCSGC	1 cut(s)	99
TfiI	GAWTC	2 cut(s)	541, 1117
TscAI	CASTG	3 cut(s)	133, 282, 1243
TseFI	GTSAC	1 cut(s)	759
TseI	GCWGC	7 cut(s)	93, 123, 248, 614, 800, 1022, 1034
Tsp45I	GTSAC	1 cut(s)	759
TspDTI	ATGAA	6 cut(s)	257, 508, 920, 950, 1103, 1193
TspRI	CASTG	3 cut(s)	133, 282, 1243
XapI	RAATTY	4 cut(s)	259, 700, 714, 876
XceI	RCATGY	1 cut(s)	767
XmnI	GAANNNNTTC	2 cut(s)	445, 1116
XspI	CTAG	5 cut(s)	255, 437, 626, 774, 1058

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.