RH2CG117400
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: Sequence Only
Biological Identity
rosa_samantha
Unknown
Physical Location & Seq
Reverse (-)
0 .. 0
1 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG117400.1

Sequence Viewer

Length: 1233 bp
ATGGGTATCTGCTTTGGATCTCCTGCTACTCTCCCTAACACCATCACAACATCAACTACAGGGACAATTGAAATTCACAGCAGGAATAGAGTTTCACAGACAAGCAGCAGCACAATGAGAAGTCAATTTTCTCATTTTTCAGAAGCAACAACATCAACACTAAGCCCAAGATTTGATGATGATCAGCAGTCAACGGATGGCGAAATTTTGGAGACATCAACTTTGAGAGTCTTCAGTTTTGCAGATATGAAATCTGCTACCAAGAACTTCAAGTCAGATCAAATTCTGGGTGAGGGAGGATTTGGCAGAGTTTTCAAAGGTTGGGTGGATGAAAAAACTCTTCAACCATGTAAGGCTGGCACTGGAATGATGGTTGCTGTCAAGAAATTAAACCCTGAAAGTATGCAAGGTTTCCAAGAGTGGCAGTCAGAAGTGAACTTTCTAGGAAGGCTTTCTCATCCCAACCTTGTCAAGCTATTGGGATACTGTTGGGAAGACACGGAGCTACTCCTTGTTTATGAGTTCATGCAGAAAGGGAATCCTAACATTGAACCACTATCTTGGGACATTAGAATCAGAATAGCTATTGGAGCAGCTCGAGGCCTAGCATTCTTGCACAGTTCAGAAAAGCAAATCATATATAGAGATTTCAAGGCCGCAAATATATTGCTTGATGGGAATTATAATGCAAAAATCTCAGATTTTGGCTTGGCGAAATTGGGACCAACTGGTGGAGACTCACATGTGTCAACTAGAGTTATGGGGACATATGGTTATGCTGCTCCAGAATACATTGCAACAGGTCATTTGTATGTGAAGAGCGACGTGTATGGTTTCGGTGTTGTGCTGCTTGAAATTCTGACAGGGTTACGAGCACTCGATACAAAACGCCCTAAGGAGCAACTTAATCTGGTGGACTGGGCTAAACCACTTCTTCCTCATCGAAGAAAGTTAAAAACGATTATGGATGCAAGGATGGAGGGCCAATATTCCTTCAAGGCAGCATTACAGACAGCAAATATTACTCTAAAATGCCTGGCGCCAGATCCTAAAAGCCGGCCTTCCATGAAAGTAGTCTTGGAAGAACTGGAACAGGTTCAGGCAATCAGAGAAAAACCAAAGCCATCATTACTAATTACCTCTAGGCAAACTACTTCTATTACTCGATCCTATGTACTTCAAGAGCCTGTTCGTCGTTCCCCACTTCACTCCAGGTACCAAGCCACTACATGA

Protein Analysis

410

Amino Acids

45.74

Weight (kDa)

9.23

Isoelectric Point (pI)

40.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 91 - 361 1.1e-40 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 92 - 363 1.3e-41 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 684
Acc65I GGTACC 1 cut(s) 1215
AccB1I GGYRCC 2 cut(s) 1039, 1215
AccB7I CCANNNNNTGG 1 cut(s) 731
AciI CCGC 1 cut(s) 657
AclWI GGATC 3 cut(s) 25, 1040, 1161
AcsI RAATTY 4 cut(s) 72, 204, 282, 855
AcuI CTGAAG 1 cut(s) 217
AcyI GRCGYC 1 cut(s) 1040
AfaI GTAC 2 cut(s) 1176, 1217
AfiI CCNNNNNNNGG 1 cut(s) 731
AflIII ACRYGT 2 cut(s) 742, 825
AgsI TTSAA 9 cut(s) 71, 271, 316, 344, 551, 652, 854, 997, 1181
AjiI CACGTC 1 cut(s) 826
AjnI CCWGG 2 cut(s) 1035, 1211
AjuI GAANNNNNNNTTGG 2 cut(s) 1061, 1093
AluBI AGCT 4 cut(s) 475, 505, 584, 596
AluI AGCT 4 cut(s) 475, 505, 584, 596
Alw21I GWGCWC 1 cut(s) 877
Alw26I GTCTC 2 cut(s) 206, 729
AlwI GGATC 3 cut(s) 25, 1040, 1161
Ama87I CYCGRG 1 cut(s) 597
AoxI GGCC 4 cut(s) 601, 654, 982, 1058
ApeKI GCWGC 6 cut(s) 105, 108, 593, 779, 847, 1001
ApoI RAATTY 4 cut(s) 72, 204, 282, 855
ArsI GACNNNNNNTTYG 2 cut(s) 205, 237
Asp700I GAANNNNTTC 2 cut(s) 451, 1095
Asp718I GGTACC 1 cut(s) 1215
AspLEI GCGC 1 cut(s) 1042
AspS9I GGNCC 2 cut(s) 722, 982
AsuHPI GGTGA 1 cut(s) 302
AvaI CYCGRG 1 cut(s) 597
AvaII GGWCC 1 cut(s) 722
AxyI CCTNAGG 1 cut(s) 894
BanI GGYRCC 2 cut(s) 1039, 1215
BbsI GAAGAC 2 cut(s) 223, 501
Bbv12I GWGCWC 1 cut(s) 877
BbvI GCAGC 6 cut(s) 117, 120, 605, 766, 834, 1013
BccI CCATC 6 cut(s) 50, 191, 364, 668, 970, 1132
BciT130I CCWGG 2 cut(s) 1037, 1213
BciVI GTATCC 1 cut(s) 476
BclI TGATCA 1 cut(s) 181
BcoDI GTCTC 2 cut(s) 206, 729
BfaI CTAG 4 cut(s) 443, 605, 753, 1143
BfmI CTRYAG 1 cut(s) 57
BfoI RGCGCY 1 cut(s) 1043
BfuI GTATCC 1 cut(s) 476
BisI GCNGC 7 cut(s) 106, 109, 594, 657, 780, 848, 1002
BlsI GCNGC 7 cut(s) 107, 110, 595, 658, 781, 849, 1003
Bme1390I CCNGG 2 cut(s) 1037, 1213
Bme18I GGWCC 1 cut(s) 722
BmeT110I CYCGRG 1 cut(s) 597
BmgBI CACGTC 1 cut(s) 826
BmgT120I GGNCC 2 cut(s) 722, 982
BmiI GGNNCC 3 cut(s) 723, 1041, 1217
BmrFI CCNGG 2 cut(s) 1037, 1213
BmrI ACTGGG 1 cut(s) 928
BmsI GCATC 1 cut(s) 958
BmuI ACTGGG 1 cut(s) 928
BpiI GAAGAC 2 cut(s) 223, 501
BpmI CTGGAG 2 cut(s) 768, 1195
BsaBI GATNNNNATC 1 cut(s) 180
BsaHI GRCGYC 1 cut(s) 1040
Bsc4I CCNNNNNNNGG 1 cut(s) 731
Bse118I RCCGGY 1 cut(s) 1056
Bse1I ACTGG 4 cut(s) 367, 733, 923, 1092
Bse21I CCTNAGG 1 cut(s) 894
Bse3DI GCAATG 1 cut(s) 792
Bse8I GATNNNNATC 1 cut(s) 180
BseBI CCWGG 2 cut(s) 1037, 1213
BseGI GGATG 5 cut(s) 202, 334, 457, 973, 981
BseJI GATNNNNATC 1 cut(s) 180
BseLI CCNNNNNNNGG 1 cut(s) 731
BseMI GCAATG 1 cut(s) 792
BseMII CTCAG 1 cut(s) 711
BseNI ACTGG 4 cut(s) 367, 733, 923, 1092
BseXI GCAGC 6 cut(s) 117, 120, 605, 766, 834, 1013
BshFI GGCC 4 cut(s) 603, 656, 984, 1060
BshNI GGYRCC 2 cut(s) 1039, 1215
BsiHKAI GWGCWC 1 cut(s) 877
BsiHKCI CYCGRG 1 cut(s) 597
BsiSI CCGG 1 cut(s) 1057
BslFI GGGAC 4 cut(s) 76, 578, 735, 778
BslI CCNNNNNNNGG 1 cut(s) 731
BsmAI GTCTC 2 cut(s) 206, 729
BsmFI GGGAC 4 cut(s) 76, 578, 735, 778
BsmI GAATGC 1 cut(s) 608
BsnI GGCC 4 cut(s) 603, 656, 984, 1060
BsoBI CYCGRG 1 cut(s) 597
Bsp1286I GDGCHC 1 cut(s) 877
Bsp143I GATC 5 cut(s) 17, 181, 277, 1045, 1166
BspACI CCGC 1 cut(s) 657
BspANI GGCC 4 cut(s) 603, 656, 984, 1060
BspCNI CTCAG 1 cut(s) 710
BspLI GGNNCC 3 cut(s) 723, 1041, 1217
BspPI GGATC 3 cut(s) 25, 1040, 1161
BspQI GCTCTTC 1 cut(s) 812
BspT107I GGYRCC 2 cut(s) 1039, 1215
BsrDI GCAATG 1 cut(s) 792
BsrFI RCCGGY 1 cut(s) 1056
BsrI ACTGG 4 cut(s) 367, 733, 923, 1092
BssAI RCCGGY 1 cut(s) 1056
BssMI GATC 5 cut(s) 17, 181, 277, 1045, 1166
BssNI GRCGYC 1 cut(s) 1040
Bst2UI CCWGG 2 cut(s) 1037, 1213
Bst4CI ACNGT 2 cut(s) 488, 620
Bst6I CTCTTC 2 cut(s) 345, 812
BstACI GRCGYC 1 cut(s) 1040
BstC8I GCNNGC 2 cut(s) 358, 1058
BstDEI CTNAG 3 cut(s) 161, 697, 894
BstF5I GGATG 5 cut(s) 202, 334, 457, 973, 981
BstH2I RGCGCY 1 cut(s) 1043
BstHHI GCGC 1 cut(s) 1042
BstKTI GATC 5 cut(s) 20, 184, 280, 1048, 1169
BstMAI GTCTC 2 cut(s) 206, 729
BstMBI GATC 5 cut(s) 17, 181, 277, 1045, 1166
BstMWI GCNNNNNNNGC 1 cut(s) 590
BstNI CCWGG 2 cut(s) 1037, 1213
BstNSI RCATGY 1 cut(s) 746
BstSCI CCNGG 2 cut(s) 1035, 1211
BstSFI CTRYAG 1 cut(s) 57
BstV1I GCAGC 6 cut(s) 117, 120, 605, 766, 834, 1013
BstV2I GAAGAC 2 cut(s) 223, 501
BstX2I RGATCY 2 cut(s) 17, 1045
BstXI CCANNNNNNTGG 1 cut(s) 561
BstYI RGATCY 2 cut(s) 17, 1045
Bsu36I CCTNAGG 1 cut(s) 894
BsuI GTATCC 1 cut(s) 476
BsuRI GGCC 4 cut(s) 603, 656, 984, 1060
BtrI CACGTC 1 cut(s) 826
BtsCI GGATG 5 cut(s) 202, 334, 457, 973, 981
BtsIMutI CAGTG 1 cut(s) 360
Cac8I GCNNGC 2 cut(s) 358, 1058
CfoI GCGC 1 cut(s) 1042
Cfr10I RCCGGY 1 cut(s) 1056
Cfr13I GGNCC 2 cut(s) 722, 982
Csp6I GTAC 2 cut(s) 1175, 1216
CviAII CATG 5 cut(s) 348, 526, 743, 1066, 1230
CviQI GTAC 2 cut(s) 1175, 1216
DdeI CTNAG 3 cut(s) 161, 697, 894
DinI GGCGCC 1 cut(s) 1041
DpnI GATC 5 cut(s) 19, 183, 279, 1047, 1168
DpnII GATC 5 cut(s) 17, 181, 277, 1045, 1166
Eam1104I CTCTTC 2 cut(s) 345, 812
EarI CTCTTC 2 cut(s) 345, 812
Eco147I AGGCCT 1 cut(s) 603
Eco47I GGWCC 1 cut(s) 722
Eco57I CTGAAG 1 cut(s) 217
Eco81I CCTNAGG 1 cut(s) 894
Eco88I CYCGRG 1 cut(s) 597
EcoRII CCWGG 2 cut(s) 1035, 1211
EgeI GGCGCC 1 cut(s) 1041
EheI GGCGCC 1 cut(s) 1041
FaeI CATG 5 cut(s) 351, 529, 746, 1069, 1233
FalI AAGNNNNNCTT 2 cut(s) 1045, 1077
FaqI GGGAC 4 cut(s) 76, 578, 735, 778
FatI CATG 5 cut(s) 347, 525, 742, 1065, 1229
FauNDI CATATG 1 cut(s) 769
FbaI TGATCA 1 cut(s) 181
Fnu4HI GCNGC 7 cut(s) 106, 109, 594, 657, 780, 848, 1002
FokI GGATG 5 cut(s) 209, 341, 444, 980, 988
Fsp4HI GCNGC 7 cut(s) 106, 109, 594, 657, 780, 848, 1002
FspBI CTAG 4 cut(s) 443, 605, 753, 1143
GlaI GCGC 1 cut(s) 1041
GluI GCNGC 7 cut(s) 106, 109, 594, 657, 780, 848, 1002
GsuI CTGGAG 2 cut(s) 768, 1195
HaeII RGCGCY 1 cut(s) 1043
HaeIII GGCC 4 cut(s) 603, 656, 984, 1060
HapII CCGG 1 cut(s) 1057
HhaI GCGC 1 cut(s) 1042
Hin1I GRCGYC 1 cut(s) 1040
Hin1II CATG 5 cut(s) 351, 529, 746, 1069, 1233
Hin6I GCGC 1 cut(s) 1040
HinP1I GCGC 1 cut(s) 1040
HincII GTYRAC 2 cut(s) 192, 750
HindII GTYRAC 2 cut(s) 192, 750
HinfI GANTC 4 cut(s) 228, 538, 573, 737
HpaII CCGG 1 cut(s) 1057
HphI GGTGA 1 cut(s) 302
Hpy166II GTNNAC 4 cut(s) 192, 436, 750, 916
Hpy188I TCNGA 8 cut(s) 142, 277, 430, 578, 625, 700, 861, 1109
Hpy188III TCNNGA 3 cut(s) 382, 785, 1181
Hpy8I GTNNAC 4 cut(s) 192, 436, 750, 916
Hpy99I CGWCG 2 cut(s) 827, 1197
HpyAV CCTTC 3 cut(s) 441, 1003, 1071
HpyCH4III ACNGT 2 cut(s) 488, 620
HpyCH4IV ACGT 1 cut(s) 825
HpyCH4V TGCA 7 cut(s) 242, 406, 529, 616, 689, 797, 971
HpyF10VI GCNNNNNNNGC 1 cut(s) 590
HpyF3I CTNAG 3 cut(s) 161, 697, 894
HpySE526I ACGT 1 cut(s) 825
Hsp92I GRCGYC 1 cut(s) 1040
Hsp92II CATG 5 cut(s) 351, 529, 746, 1069, 1233
HspAI GCGC 1 cut(s) 1040
KasI GGCGCC 1 cut(s) 1039
KpnI GGTACC 1 cut(s) 1219
KroI GCCGGC 1 cut(s) 1056
KroNI GCCGGC 1 cut(s) 1058
Ksp22I TGATCA 1 cut(s) 181
Kzo9I GATC 5 cut(s) 17, 181, 277, 1045, 1166
LguI GCTCTTC 1 cut(s) 812
LmnI GCTCC 4 cut(s) 502, 590, 787, 898
Lsp1109I GCAGC 6 cut(s) 117, 120, 605, 766, 834, 1013
LweI GCATC 1 cut(s) 958
MaeI CTAG 4 cut(s) 443, 605, 753, 1143
MaeII ACGT 1 cut(s) 825
MaeIII GTNAC 1 cut(s) 867
MalI GATC 5 cut(s) 19, 183, 279, 1047, 1168
MboI GATC 5 cut(s) 17, 181, 277, 1045, 1166
MboII GAAGA 7 cut(s) 223, 332, 506, 829, 926, 957, 1094
MfeI CAATTG 1 cut(s) 66
MflI RGATCY 2 cut(s) 17, 1045
MhlI GDGCHC 1 cut(s) 877
Mly113I GGCGCC 1 cut(s) 1040
MlyI GAGTC 2 cut(s) 237, 731
MnlI CCTC 6 cut(s) 286, 290, 593, 948, 973, 1150
MroNI GCCGGC 1 cut(s) 1056
MroXI GAANNNNTTC 2 cut(s) 451, 1095
MseI TTAA 3 cut(s) 389, 906, 953
MslI CAYNNNNRTG 2 cut(s) 365, 810
MspI CCGG 1 cut(s) 1057
MspR9I CCNGG 2 cut(s) 1037, 1213
MunI CAATTG 1 cut(s) 66
Mva1269I GAATGC 1 cut(s) 608
MvaI CCWGG 2 cut(s) 1037, 1213
MwoI GCNNNNNNNGC 1 cut(s) 590
NaeI GCCGGC 1 cut(s) 1058
NarI GGCGCC 1 cut(s) 1040
NdeI CATATG 1 cut(s) 769
NdeII GATC 5 cut(s) 17, 181, 277, 1045, 1166
NgoMIV GCCGGC 1 cut(s) 1056
NlaIII CATG 5 cut(s) 351, 529, 746, 1069, 1233
NlaIV GGNNCC 3 cut(s) 723, 1041, 1217
NspI RCATGY 1 cut(s) 746
PaeR7I CTCGAG 1 cut(s) 597
PceI AGGCCT 1 cut(s) 603
PciI ACATGT 1 cut(s) 742
PciSI GCTCTTC 1 cut(s) 812
PctI GAATGC 1 cut(s) 608
PdiI GCCGGC 1 cut(s) 1058
PdmI GAANNNNTTC 2 cut(s) 451, 1095
PfeI GAWTC 2 cut(s) 538, 573
PflMI CCANNNNNTGG 1 cut(s) 731
PkrI GCNGC 7 cut(s) 107, 110, 595, 658, 781, 849, 1003
PleI GAGTC 2 cut(s) 236, 731
PluTI GGCGCC 1 cut(s) 1043
PpsI GAGTC 2 cut(s) 236, 731
PscI ACATGT 1 cut(s) 742
PsiI TTATAA 1 cut(s) 684
Psp6I CCWGG 2 cut(s) 1035, 1211
PspGI CCWGG 2 cut(s) 1035, 1211
PspN4I GGNNCC 3 cut(s) 723, 1041, 1217
PspPI GGNCC 2 cut(s) 722, 982
PspXI VCTCGAGB 1 cut(s) 597
PsuI RGATCY 2 cut(s) 17, 1045
RsaI GTAC 2 cut(s) 1176, 1217
RsaNI GTAC 2 cut(s) 1175, 1216
RseI CAYNNNNRTG 2 cut(s) 365, 810
SapI GCTCTTC 1 cut(s) 812
SaqAI TTAA 3 cut(s) 389, 906, 953
SatI GCNGC 7 cut(s) 106, 109, 594, 657, 780, 848, 1002
Sau3AI GATC 5 cut(s) 17, 181, 277, 1045, 1166
Sau96I GGNCC 2 cut(s) 722, 982
SchI GAGTC 2 cut(s) 237, 731
ScrFI CCNGG 2 cut(s) 1037, 1213
SduI GDGCHC 1 cut(s) 877
SfaNI GCATC 1 cut(s) 958
SfcI CTRYAG 1 cut(s) 57
SfoI GGCGCC 1 cut(s) 1041
Sfr274I CTCGAG 1 cut(s) 597
SinI GGWCC 1 cut(s) 722
SlaI CTCGAG 1 cut(s) 597
SmiMI CAYNNNNRTG 2 cut(s) 365, 810
SmlI CTYRAG 1 cut(s) 597
SmoI CTYRAG 1 cut(s) 597
SseBI AGGCCT 1 cut(s) 603
SsiI CCGC 1 cut(s) 657
SspDI GGCGCC 1 cut(s) 1039
SspI AATATT 2 cut(s) 989, 1021
SspMI CTAG 4 cut(s) 443, 605, 753, 1143
StuI AGGCCT 1 cut(s) 603
StyD4I CCNGG 2 cut(s) 1035, 1211
TaaI ACNGT 2 cut(s) 488, 620
TaiI ACGT 1 cut(s) 828
TaqI TCGA 4 cut(s) 598, 879, 943, 1165
TatI WGTACW 1 cut(s) 1174
TauI GCSGC 1 cut(s) 659
TfiI GAWTC 2 cut(s) 538, 573
Tru1I TTAA 3 cut(s) 389, 906, 953
Tru9I TTAA 3 cut(s) 389, 906, 953
TscAI CASTG 1 cut(s) 367
TseI GCWGC 6 cut(s) 105, 108, 593, 779, 847, 1001
TspDTI ATGAA 4 cut(s) 263, 345, 514, 1082
TspGWI ACGGA 2 cut(s) 209, 515
TspRI CASTG 1 cut(s) 367
Van91I CCANNNNNTGG 1 cut(s) 731
VpaK11BI GGWCC 1 cut(s) 722
XapI RAATTY 4 cut(s) 72, 204, 282, 855
XceI RCATGY 1 cut(s) 746
XhoI CTCGAG 1 cut(s) 597
XmnI GAANNNNTTC 2 cut(s) 451, 1095
XspI CTAG 4 cut(s) 443, 605, 753, 1143
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.