AT4G37820
MYB Family

Myb-like protein X

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0001952
Physical Location & Seq
Forward (+)
17785254 .. 17787477
2224 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G37820.2

Sequence Viewer

Length: 1599 bp
ATGGTGAGAACGCCGCGAAGAGGGCAGAGATCAAAGGGAATTAAAGTGAAGCATTGTATTCAGTTGACTCTATTGCTTGGTGTTGGGATATGGCTGATTTATCAAATGAAGCATTCACATGAGAAGAAAGCTGAGTTTGAAGGGACTTCAAAGATTGTTGTTGATGATATTGATAATACAGTTGTTAATCTTGGAAGGAAAGATCTTAGACCGCGTATTGAGGAGACGAAAGATGTGAAGGACGAAGTGGAAGATGAAGAAGGGAGCAAGAATGAAGGAGGAGGAGACGTAAGTACTGATAAGGAGAATGGTGATGAGATTGTAGAGAGGGAGGAGGAGGAAAAGGCTGTAGAAGAGAATAACGAGAAGGAAGCTGAAGGTACCGGGAATGAAGAGGGAAACGAGGATTCAAACAATGGAGAAAGTGAGAAGGTTGTTGATGAGAGTGAAGGTGGAAATGAGATAAGTAATGAGGAAGCTAGGGAGATCAATTACAAGGGAGATGATGCGTCGAGTGAGGTTATGCATGGGACGGAGGAGAAGAGCAATGAAAAGGTTGAAGTTGAGGGAGAAAGTAAATCTAATAGTACTGAAAATGTCAGTGTCCATGAAGATGAGTCGGGTCCAAAGAATGAAGTATTGGAGGGTTCTGTTATTAAAGAAGTTTCTTTGAACACAACTGAGAATGGTAGTGATGATGGTGAGCAACAAGAGACAAAGAGTGAGTTGGATTCAAAGACTGGTGAGAAGGGCTTTTCTGATTCTAATGGTGAATTGCCTGAGACTAACCTGTCAACTTCCAATGCAACTGAAACTACAGAATCTTCTGGGAGTGATGAGTCAGGATCGAGCGGGAAATCCACTGGTTATCAACAAACGAAAAACGAAGAAGATGAGAAGGAAAAGGTACAATCATCTGAAGAGGAAAGCAAAGTCAAAGAATCCGGGAAAAATGAGAAGGACGCGTCCTCGTCCCAAGACGAAAGTAAAGAGGAAAAACCCGAGAGAAAGAAGAAAGAAGAGTCTTCGTCCCAAGGGGAAGGTAAAGAAGAAGAACCCGAGAAAAGGGAGAAAGAAGACTCTTCATCCCAAGAGGAAAGTAAAGAGGAAGAACCTGAGAACAAAGAGAAAGAAGCGTCTTCCTCTCAGGAGGAGAATGAGATTAAAGAAACTGAGATAAAGGAGAAAGAAGAGTCTTCGTCCCAAGAGGGGAATGAGAACAAAGAAACAGAAAAAAAGTCTTCCGAATCTCAGAGAAAGGAAAACACCAACAGTGAGAAGAAAATTGAACAGGTGGAATCTACTGATTCTTCAAACACACAGAAGGGTGACGAACAGAAAACTGATGAAAGCAAGAGAGAATCCGGCAATGATACTTCAAATAAGGAAACAGAGGATGATAGTTCAAAAACAGAGTCAGAGAAGAAAGAGGAAAATAACAGAAATGGTGAAACAGAGGAGACCCAAAACGAACAAGAACAGACCAAGTCCGCTTTGGAAATTAGTCACACTCAAGATGTTAAGGATGCTCGAACTGATCTAGAAACTCTTCCTGAAACCAGCAATGGATTGATCAGCGACAAAGTTGCTGCTGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

532

Amino Acids

59.13

Weight (kDa)

4.43

Isoelectric Point (pI)

57.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 790
Acc65I GGTACC 1 cut(s) 380
AccB1I GGYRCC 1 cut(s) 380
AccBSI CCGCTC 1 cut(s) 852
AccII CGCG 3 cut(s) 16, 214, 965
AciI CCGC 4 cut(s) 14, 212, 852, 1491
AclWI GGATC 1 cut(s) 853
AcuI CTGAAG 2 cut(s) 396, 939
AfaI GTAC 4 cut(s) 295, 382, 589, 909
AfiI CCNNNNNNNGG 3 cut(s) 20, 1065, 1209
AflIII ACRYGT 1 cut(s) 963
AjuI GAANNNNNNNTTGG 2 cut(s) 623, 655
AluBI AGCT 3 cut(s) 131, 374, 479
AluI AGCT 3 cut(s) 131, 374, 479
Alw26I GTCTC 5 cut(s) 218, 279, 707, 776, 1454
AlwI GGATC 1 cut(s) 853
Ama87I CYCGRG 2 cut(s) 1001, 1058
ApeKI GCWGC 1 cut(s) 1589
ArsI GACNNNNNNTTYG 2 cut(s) 1400, 1432
Asp700I GAANNNNTTC 1 cut(s) 1548
Asp718I GGTACC 1 cut(s) 380
AspS9I GGNCC 1 cut(s) 623
AsuC2I CCSGG 2 cut(s) 385, 946
AsuHPI GGTGA 7 cut(s) 16, 323, 713, 755, 782, 1340, 1460
AvaI CYCGRG 2 cut(s) 1001, 1058
AvaII GGWCC 1 cut(s) 623
BanI GGYRCC 1 cut(s) 380
BbsI GAAGAC 5 cut(s) 1017, 1083, 1131, 1188, 1233
BbvI GCAGC 1 cut(s) 1576
BccI CCATC 1 cut(s) 692
BcgI CGANNNNNNTGC 1 cut(s) 1568
BclI TGATCA 1 cut(s) 1572
BcnI CCSGG 2 cut(s) 385, 946
BcoDI GTCTC 5 cut(s) 218, 279, 707, 776, 1454
BfaI CTAG 2 cut(s) 480, 1541
BfmI CTRYAG 2 cut(s) 348, 816
BglII AGATCT 1 cut(s) 202
BisI GCNGC 2 cut(s) 14, 1590
BlsI GCNGC 2 cut(s) 15, 1591
BmcAI AGTACT 2 cut(s) 295, 589
Bme1390I CCNGG 2 cut(s) 385, 946
Bme18I GGWCC 1 cut(s) 623
BmeT110I CYCGRG 2 cut(s) 1001, 1058
BmgT120I GGNCC 1 cut(s) 623
BmiI GGNNCC 2 cut(s) 382, 624
BmrFI CCNGG 2 cut(s) 385, 946
BmsI GCATC 2 cut(s) 496, 1516
BpiI GAAGAC 5 cut(s) 1017, 1083, 1131, 1188, 1233
BpuEI CTTGAG 1 cut(s) 1497
BpuMI CCSGG 2 cut(s) 385, 946
BsaI GGTCTC 1 cut(s) 1454
BsaJI CCNNGG 1 cut(s) 1033
BsaXI ACNNNNNCTCC 2 cut(s) 273, 303
Bsc4I CCNNNNNNNGG 3 cut(s) 20, 1065, 1209
Bse1I ACTGG 2 cut(s) 745, 868
Bse3DI GCAATG 3 cut(s) 553, 1375, 1570
BseDI CCNNGG 1 cut(s) 1033
BseGI GGATG 3 cut(s) 1085, 1402, 1531
BseLI CCNNNNNNNGG 3 cut(s) 20, 1065, 1209
BseMI GCAATG 3 cut(s) 553, 1375, 1570
BseMII CTCAG 8 cut(s) 123, 672, 771, 1107, 1160, 1164, 1265, 1584
BseNI ACTGG 2 cut(s) 745, 868
BseRI GAGGAG 8 cut(s) 236, 294, 297, 347, 350, 551, 1166, 1472
BseXI GCAGC 1 cut(s) 1576
Bsh1236I CGCG 3 cut(s) 16, 214, 965
BshNI GGYRCC 1 cut(s) 380
BsiHKCI CYCGRG 2 cut(s) 1001, 1058
BsiSI CCGG 3 cut(s) 384, 945, 1365
BslFI GGGAC 5 cut(s) 157, 544, 958, 1015, 1186
BslI CCNNNNNNNGG 3 cut(s) 20, 1065, 1209
BsmAI GTCTC 5 cut(s) 218, 279, 707, 776, 1454
BsmBI CGTCTC 2 cut(s) 218, 279
BsmFI GGGAC 5 cut(s) 157, 544, 958, 1015, 1186
BsmI GAATGC 1 cut(s) 112
Bso31I GGTCTC 1 cut(s) 1454
BsoBI CYCGRG 2 cut(s) 1001, 1058
Bsp143I GATC 6 cut(s) 29, 202, 486, 845, 1537, 1572
BspACI CCGC 4 cut(s) 14, 212, 852, 1491
BspCNI CTCAG 8 cut(s) 124, 673, 772, 1108, 1159, 1165, 1264, 1585
BspFNI CGCG 3 cut(s) 16, 214, 965
BspLI GGNNCC 2 cut(s) 382, 624
BspPI GGATC 1 cut(s) 853
BspQI GCTCTTC 1 cut(s) 536
BspT107I GGYRCC 1 cut(s) 380
BspTNI GGTCTC 1 cut(s) 1454
BsrBI CCGCTC 1 cut(s) 852
BsrDI GCAATG 3 cut(s) 553, 1375, 1570
BsrI ACTGG 2 cut(s) 745, 868
BssECI CCNNGG 1 cut(s) 1033
BssMI GATC 6 cut(s) 29, 202, 486, 845, 1537, 1572
BssT1I CCWWGG 1 cut(s) 1033
Bst4CI ACNGT 2 cut(s) 181, 1274
Bst6I CTCTTC 9 cut(s) 13, 348, 387, 536, 915, 1014, 1087, 1185, 1554
BstDEI CTNAG 9 cut(s) 132, 206, 681, 780, 1116, 1146, 1173, 1251, 1593
BstF5I GGATG 3 cut(s) 1085, 1402, 1531
BstFNI CGCG 3 cut(s) 16, 214, 965
BstKTI GATC 6 cut(s) 32, 205, 489, 848, 1540, 1575
BstMAI GTCTC 5 cut(s) 218, 279, 707, 776, 1454
BstMBI GATC 6 cut(s) 29, 202, 486, 845, 1537, 1572
BstMWI GCNNNNNNNGC 1 cut(s) 22
BstSCI CCNGG 2 cut(s) 383, 944
BstSFI CTRYAG 2 cut(s) 348, 816
BstUI CGCG 3 cut(s) 16, 214, 965
BstV1I GCAGC 1 cut(s) 1576
BstV2I GAAGAC 5 cut(s) 1017, 1083, 1131, 1188, 1233
BstX2I RGATCY 1 cut(s) 202
BstYI RGATCY 1 cut(s) 202
BtsCI GGATG 3 cut(s) 1085, 1402, 1531
BtsIMutI CAGTG 3 cut(s) 607, 861, 1279
Cfr13I GGNCC 1 cut(s) 623
CseI GACGC 4 cut(s) 498, 954, 971, 1125
Csp6I GTAC 4 cut(s) 294, 381, 588, 908
CviAII CATG 3 cut(s) 119, 527, 608
CviJI RGCY 6 cut(s) 94, 131, 347, 374, 479, 753
CviKI_1 RGCY 6 cut(s) 94, 131, 347, 374, 479, 753
CviQI GTAC 4 cut(s) 294, 381, 588, 908
DdeI CTNAG 9 cut(s) 132, 206, 681, 780, 1116, 1146, 1173, 1251, 1593
DpnI GATC 6 cut(s) 31, 204, 488, 847, 1539, 1574
DpnII GATC 6 cut(s) 29, 202, 486, 845, 1537, 1572
DrdI GACNNNNNNGTC 1 cut(s) 790
DseDI GACNNNNNNGTC 1 cut(s) 790
Eam1104I CTCTTC 9 cut(s) 13, 348, 387, 536, 915, 1014, 1087, 1185, 1554
EarI CTCTTC 9 cut(s) 13, 348, 387, 536, 915, 1014, 1087, 1185, 1554
Eco130I CCWWGG 1 cut(s) 1033
Eco31I GGTCTC 1 cut(s) 1454
Eco47I GGWCC 1 cut(s) 623
Eco57I CTGAAG 2 cut(s) 396, 939
Eco88I CYCGRG 2 cut(s) 1001, 1058
EcoT14I CCWWGG 1 cut(s) 1033
EcoT22I ATGCAT 1 cut(s) 528
ErhI CCWWGG 1 cut(s) 1033
Esp3I CGTCTC 2 cut(s) 218, 279
FaeI CATG 3 cut(s) 122, 530, 611
FaiI YATR 5 cut(s) 91, 120, 524, 528, 609
FaqI GGGAC 5 cut(s) 157, 544, 958, 1015, 1186
FatI CATG 3 cut(s) 118, 526, 607
FauI CCCGC 1 cut(s) 845
FbaI TGATCA 1 cut(s) 1572
Fnu4HI GCNGC 2 cut(s) 14, 1590
FokI GGATG 3 cut(s) 1072, 1409, 1538
Fsp4HI GCNGC 2 cut(s) 14, 1590
FspBI CTAG 2 cut(s) 480, 1541
GluI GCNGC 2 cut(s) 14, 1590
HapII CCGG 3 cut(s) 384, 945, 1365
HgaI GACGC 4 cut(s) 498, 954, 971, 1125
Hin1II CATG 3 cut(s) 122, 530, 611
HincII GTYRAC 2 cut(s) 66, 795
HindII GTYRAC 2 cut(s) 66, 795
HpaII CCGG 3 cut(s) 384, 945, 1365
HphI GGTGA 7 cut(s) 16, 323, 713, 755, 782, 1340, 1460
Hpy166II GTNNAC 2 cut(s) 66, 795
Hpy188I TCNGA 5 cut(s) 760, 919, 1246, 1254, 1420
Hpy188III TCNNGA 5 cut(s) 843, 1148, 1514, 1541, 1553
Hpy8I GTNNAC 2 cut(s) 66, 795
Hpy99I CGWCG 1 cut(s) 514
HpyCH4III ACNGT 2 cut(s) 181, 1274
HpyCH4IV ACGT 1 cut(s) 288
HpyCH4V TGCA 2 cut(s) 526, 806
HpyF10VI GCNNNNNNNGC 1 cut(s) 22
HpyF3I CTNAG 9 cut(s) 132, 206, 681, 780, 1116, 1146, 1173, 1251, 1593
HpySE526I ACGT 1 cut(s) 288
Hsp92II CATG 3 cut(s) 122, 530, 611
KpnI GGTACC 1 cut(s) 384
Ksp22I TGATCA 1 cut(s) 1572
Kzo9I GATC 6 cut(s) 29, 202, 486, 845, 1537, 1572
LguI GCTCTTC 1 cut(s) 536
LmnI GCTCC 1 cut(s) 264
Lsp1109I GCAGC 1 cut(s) 1576
LweI GCATC 2 cut(s) 496, 1516
MaeI CTAG 2 cut(s) 480, 1541
MaeII ACGT 1 cut(s) 288
MaeIII GTNAC 2 cut(s) 1328, 1505
MalI GATC 6 cut(s) 31, 204, 488, 847, 1539, 1574
MbiI CCGCTC 1 cut(s) 852
MboI GATC 6 cut(s) 29, 202, 486, 845, 1537, 1572
MflI RGATCY 1 cut(s) 202
MluCI AATT 5 cut(s) 39, 490, 773, 1284, 1500
MluI ACGCGT 1 cut(s) 963
MlyI GAGTC 7 cut(s) 61, 626, 848, 1031, 1073, 1202, 1424
MmeI TCCRAC 1 cut(s) 708
Mph1103I ATGCAT 1 cut(s) 528
MroXI GAANNNNTTC 1 cut(s) 1548
MseI TTAA 5 cut(s) 42, 186, 657, 1164, 1521
MslI CAYNNNNRTG 2 cut(s) 117, 612
MspI CCGG 3 cut(s) 384, 945, 1365
MspR9I CCNGG 2 cut(s) 385, 946
Mva1269I GAATGC 1 cut(s) 112
MvnI CGCG 3 cut(s) 16, 214, 965
MwoI GCNNNNNNNGC 1 cut(s) 22
NciI CCSGG 2 cut(s) 385, 946
NdeII GATC 6 cut(s) 29, 202, 486, 845, 1537, 1572
NlaIII CATG 3 cut(s) 122, 530, 611
NlaIV GGNNCC 2 cut(s) 382, 624
NmuCI GTSAC 2 cut(s) 1328, 1505
NsiI ATGCAT 1 cut(s) 528
PciSI GCTCTTC 1 cut(s) 536
PctI GAATGC 1 cut(s) 112
PdmI GAANNNNTTC 1 cut(s) 1548
PfeI GAWTC 9 cut(s) 407, 731, 761, 821, 941, 1247, 1298, 1307, 1361
PflFI GACNNNGTC 1 cut(s) 1486
PfoI TCCNGGA 1 cut(s) 944
PkrI GCNGC 2 cut(s) 15, 1591
PleI GAGTC 7 cut(s) 61, 625, 847, 1030, 1073, 1201, 1423
PpsI GAGTC 7 cut(s) 61, 625, 847, 1030, 1073, 1201, 1423
PspN4I GGNNCC 2 cut(s) 382, 624
PspPI GGNCC 1 cut(s) 623
PsuI RGATCY 1 cut(s) 202
PsyI GACNNNGTC 1 cut(s) 1486
RsaI GTAC 4 cut(s) 295, 382, 589, 909
RsaNI GTAC 4 cut(s) 294, 381, 588, 908
RseI CAYNNNNRTG 2 cut(s) 117, 612
SapI GCTCTTC 1 cut(s) 536
SaqAI TTAA 5 cut(s) 42, 186, 657, 1164, 1521
SatI GCNGC 2 cut(s) 14, 1590
Sau3AI GATC 6 cut(s) 29, 202, 486, 845, 1537, 1572
Sau96I GGNCC 1 cut(s) 623
ScaI AGTACT 2 cut(s) 295, 589
SchI GAGTC 7 cut(s) 61, 626, 848, 1031, 1073, 1202, 1424
ScrFI CCNGG 2 cut(s) 385, 946
SfaNI GCATC 2 cut(s) 496, 1516
SfcI CTRYAG 2 cut(s) 348, 816
SinI GGWCC 1 cut(s) 623
SmiMI CAYNNNNRTG 2 cut(s) 117, 612
SmlI CTYRAG 1 cut(s) 1512
SmoI CTYRAG 1 cut(s) 1512
Sse9I AATT 5 cut(s) 39, 490, 773, 1284, 1500
SsiI CCGC 4 cut(s) 14, 212, 852, 1491
SspMI CTAG 2 cut(s) 480, 1541
StyD4I CCNGG 2 cut(s) 383, 944
StyI CCWWGG 1 cut(s) 1033
TaaI ACNGT 2 cut(s) 181, 1274
TaiI ACGT 1 cut(s) 291
TaqI TCGA 3 cut(s) 512, 848, 1531
TasI AATT 5 cut(s) 39, 490, 773, 1284, 1500
TatI WGTACW 2 cut(s) 293, 587
TauI GCSGC 1 cut(s) 16
TfiI GAWTC 9 cut(s) 407, 731, 761, 821, 941, 1247, 1298, 1307, 1361
Tru1I TTAA 5 cut(s) 42, 186, 657, 1164, 1521
Tru9I TTAA 5 cut(s) 42, 186, 657, 1164, 1521
TscAI CASTG 3 cut(s) 607, 868, 1279
TseFI GTSAC 2 cut(s) 1328, 1505
TseI GCWGC 1 cut(s) 1589
Tsp45I GTSAC 2 cut(s) 1328, 1505
TspDTI ATGAA 9 cut(s) 122, 270, 288, 405, 564, 624, 648, 1074, 1362
TspGWI ACGGA 1 cut(s) 548
TspRI CASTG 3 cut(s) 607, 868, 1279
Tth111I GACNNNGTC 1 cut(s) 1486
VpaK11BI GGWCC 1 cut(s) 623
XbaI TCTAGA 1 cut(s) 1540
XcmI CCANNNNNNNNNTGG 1 cut(s) 1492
XmnI GAANNNNTTC 1 cut(s) 1548
XspI CTAG 2 cut(s) 480, 1541
ZrmI AGTACT 2 cut(s) 295, 589
Zsp2I ATGCAT 1 cut(s) 528
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.