FvH4_1g18591
MYB Family

Myb-like protein X

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Forward (+)
10927377 .. 10933520
6144 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g18591.t3

Sequence Viewer

Length: 2313 bp
ATGTTCAAGCTATCTCCTCGCAGGAGCCCGAGATCTAAAGGTTTCAAGGTGAAGCATGTACTACAAATATGTATTTTGGCAGGTGTTTGCATCTGGCTTGTTTACCAAGTCAAGCAGTCTGGAGCCAAGAAATCACAGTTAGCTGCAAGCATGAAGGATGGGGAAGGAATTGTAAAGTTGGGAAGAAAGGACCTCAACCCTCTTCGGGAGGAGACTGTGGTTGAAGATGCAAGGCACAAGGAGGAGGAGGAGGAAGAAGAAAACAGGAATCTGGAAGAGCCAAATAAGCCTGAAGAGATCGGTAATGTAGGAGGAGGCAGTGGAGAAGACCAGATAAATGAGAATGATCAGTCAAAAGTTGAGGAGACAAGGGACGAACATGTTGATTCGGTAGAAGATAAAACAACAGAAGTGACAAGGGAGACTATTAATGAGGATAGCACTGGGAATGAAAATGAAGAGATCAAGGATGATGTTGATGGAAACACGAAGAATGATGATGTCAAAGAGAATGAGACTGAGGAGAGCAATGAAAAGGTAACTGAAGAAGTTAAAGAGAAAGAAAGTGAAGAGGTGAAGGAGACTGAGGAAAGCAATGAAAAGGTAACTGAAGAGGTTAAAGAGAAAGAAAGTGAGGAGGTGAAGGAGACTGAGGAAAGCAATGCAAAGGTAACTGAAGAGGTCAAAGAGAAAGAAAGTGAGGAGGTGAAGGAGACTGAAGTGACCAAAGAAAAAGAAGGTGAAGAGGTGAAGGAGAATGAAGAGACCAAGGAGGAAGGAACATCAGAGGAGAGTCAGGCGGAGGTCAATAAGGAGGAGGGGGAAGAACACAATGAGACAGATAAAGAAAAGGAGGCAGAAGAGAAGGAAGCTGATAAGATTGAACAGGTGATTTTATCTGATGACCAGGTTCAAAAGAGAGGTGAAAAACACAATGAGGAGGCAAGAGAAGAGCATTACAAGGCTGATGATGCTTCCAGTGCTGTGGCTCATGAAACTCAAAATGGATCAACTGATAATGAACAAGGTGGTTCAGTAAACACTAATGAATCAGAACAGTCAGTTCAGCAGGAGAACAATGCAAATAGCACTGTAGTGTATGATGACAAAAACAAGTTGGTCTCAAACGAGGGAGCAATTGAAAGCATTGAAAAGAATGATGCTCAAAATGCTACCATATCCAAAGTGGTTTCTGAGGAGAGTAATCCTTCTGAAACAGAGAATGGTTCCAAATCTAGTTCAACAGAATCATCAGACCAGCAGCAAGGGGACACCAAAAAAGATGACTCTGCTCAGCAAAATGTTGTCACAGAGCAAACTGAGAGATCTGATGTAGCTACTAACACTGAGCAACAAGACTCTGGCTCAACAGTTTCCACCACAACTGAGAAGGGTGATACAACTAATGGAGAATCCATAGATGCTTCTAGTAATTCTGAATCAGTTGTGACAGATAATCAGACTGTCAACTCCAATACATCTACTGAAAAAGAGAATGGTTCTACATCTTCAGACTTGAAGATCGTTCAAAAGACAAACAGTGACGCTGTGGAAGAAGGAACACAAGAAAGTATACTATCTCAGAAAACAAATGACAATACTGATACTGGAGCAGAGCAACAAGTTGATTCTTCTAATTCCACAGAGCAGCAGGATAAAGATGCATCCTCAAGCACAGATAACAAAACTGGTGCAGGCCAGAATGAAAATGACAGTGCTGTTCAGAACAGCACAAATGGCAATGGGAATACAGATGCAAACCAAGGAGAATCAGTTGACTCTTCCAATTCTTCTGTATCACAAGAGAAAGAGGCATCTCAGAACACAGATAGCAATGCTGATTCTAAACAGAAAGAGAATGAGAATGTTGTTCAAAGCAATACCGATGACAATGCAGATGTGGGCCAAAAGGAATTGGCTAATACATCAGTATTCTCAGACACCAATGCTGAAACTGGGAATAATCAAAAGGAGAATGTCGCTCAGAGCAACGCAAATGAGAATGTCGGTCAGAGCAACACAAATGACAATGTCGGTCAGAGCAACGCAAATGAGAATGTTGTTCAGAGCAACACAAATGAGAATGTTGTTCAGAGCAACACAAAAGAGAATGAGGGTGCAGGAGGAGAAGAATCTGGTAATGCTAAGGAGAACGAAGCTTCCTCAAGTACAAATGACAACACTGAGGCGCAGAATGTCAATGTTGAGTCTACAAATACTACAATCCCTGAAGAAGAAAAAGAGGCTCGTATAGACCTGGACACTTTGCCAGATAGCAAAGTTGAAGTGCATAACAATGATGCTGCAGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

771

Amino Acids

84.09

Weight (kDa)

4.23

Isoelectric Point (pI)

50.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 71
Acc36I ACCTGC 1 cut(s) 71
AccI GTMKAC 2 cut(s) 1573, 2210
AciI CCGC 1 cut(s) 800
AclWI GGATC 1 cut(s) 1015
AcuI CTGAAG 7 cut(s) 312, 564, 630, 696, 738, 1494, 2250
AfaI GTAC 2 cut(s) 60, 2170
AfiI CCNNNNNNNGG 1 cut(s) 205
AflIII ACRYGT 1 cut(s) 379
AjnI CCWGG 2 cut(s) 906, 2256
AleI CACNNNNGTG 1 cut(s) 1094
AloI GAACNNNNNNTCC 2 cut(s) 2144, 2176
AluBI AGCT 5 cut(s) 10, 143, 872, 1337, 2159
AluI AGCT 5 cut(s) 10, 143, 872, 1337, 2159
AlwI GGATC 1 cut(s) 1015
Ama87I CYCGRG 1 cut(s) 28
AoxI GGCC 2 cut(s) 1696, 1903
ApeKI GCWGC 4 cut(s) 143, 1261, 1648, 2303
AseI ATTAAT 1 cut(s) 429
AspLEI GCGC 1 cut(s) 2191
AspS9I GGNCC 2 cut(s) 190, 1903
AsuHPI GGTGA 9 cut(s) 61, 586, 652, 718, 752, 760, 901, 935, 1406
AvaI CYCGRG 1 cut(s) 28
AvaII GGWCC 1 cut(s) 190
BanII GRGCYC 1 cut(s) 29
BbsI GAAGAC 1 cut(s) 333
BbvI GCAGC 4 cut(s) 130, 1273, 1660, 2290
BccI CCATC 2 cut(s) 152, 473
BcgI CGANNNNNNTGC 2 cut(s) 1874, 1908
BciT130I CCWGG 2 cut(s) 908, 2258
BclI TGATCA 1 cut(s) 346
BfaI CTAG 2 cut(s) 1236, 1428
BfmI CTRYAG 2 cut(s) 1092, 2304
BfuAI ACCTGC 1 cut(s) 71
BglII AGATCT 2 cut(s) 32, 1325
BisI GCNGC 4 cut(s) 144, 1262, 1649, 2304
BlpI GCTNAGC 1 cut(s) 1293
BlsI GCNGC 4 cut(s) 145, 1263, 1650, 2305
Bme1390I CCNGG 2 cut(s) 908, 2258
Bme18I GGWCC 1 cut(s) 190
BmeT110I CYCGRG 1 cut(s) 28
BmgT120I GGNCC 2 cut(s) 190, 1903
BmiI GGNNCC 3 cut(s) 26, 124, 1228
BmrFI CCNGG 2 cut(s) 908, 2258
BmrI ACTGGG 2 cut(s) 453, 1965
BmuI ACTGGG 2 cut(s) 453, 1965
BpiI GAAGAC 1 cut(s) 333
BpmI CTGGAG 2 cut(s) 141, 1629
Bpu10I CCTNAGC 1 cut(s) 2145
Bpu1102I GCTNAGC 1 cut(s) 1293
BpuEI CTTGAG 2 cut(s) 1654, 2149
BsaI GGTCTC 2 cut(s) 758, 1126
BsaJI CCNNGG 2 cut(s) 768, 1762
BsaXI ACNNNNNCTCC 2 cut(s) 1758, 1788
Bsc4I CCNNNNNNNGG 1 cut(s) 205
Bse1I ACTGG 5 cut(s) 448, 978, 1612, 1693, 1960
Bse3DI GCAATG 5 cut(s) 535, 601, 667, 1747, 1840
BseBI CCWGG 2 cut(s) 908, 2258
BseDI CCNNGG 2 cut(s) 768, 1762
BseGI GGATG 3 cut(s) 163, 475, 1664
BseLI CCNNNNNNNGG 1 cut(s) 205
BseMI GCAATG 5 cut(s) 535, 601, 667, 1747, 1840
BseNI ACTGG 5 cut(s) 448, 978, 1612, 1693, 1960
BseXI GCAGC 4 cut(s) 130, 1273, 1660, 2290
BsgI GTGCAG 2 cut(s) 1713, 2139
BshFI GGCC 2 cut(s) 1698, 1905
BsiHKCI CYCGRG 1 cut(s) 28
BslFI GGGAC 2 cut(s) 386, 1283
BslI CCNNNNNNNGG 1 cut(s) 205
BsmFI GGGAC 2 cut(s) 386, 1283
BsnI GGCC 2 cut(s) 1698, 1905
Bso31I GGTCTC 2 cut(s) 758, 1126
BsoBI CYCGRG 1 cut(s) 28
Bsp1286I GDGCHC 1 cut(s) 29
Bsp143I GATC 7 cut(s) 32, 297, 346, 462, 1007, 1325, 1521
Bsp1720I GCTNAGC 1 cut(s) 1293
BspACI CCGC 1 cut(s) 800
BspANI GGCC 2 cut(s) 1698, 1905
BspHI TCATGA 1 cut(s) 991
BspLI GGNNCC 3 cut(s) 26, 124, 1228
BspMAI CTGCAG 1 cut(s) 2308
BspMI ACCTGC 1 cut(s) 71
BspPI GGATC 1 cut(s) 1015
BspQI GCTCTTC 2 cut(s) 270, 945
BspTNI GGTCTC 2 cut(s) 758, 1126
BsrDI GCAATG 5 cut(s) 535, 601, 667, 1747, 1840
BsrI ACTGG 5 cut(s) 448, 978, 1612, 1693, 1960
BssECI CCNNGG 2 cut(s) 768, 1762
BssMI GATC 7 cut(s) 32, 297, 346, 462, 1007, 1325, 1521
BssNAI GTATAC 1 cut(s) 1574
BssT1I CCWWGG 2 cut(s) 768, 1762
Bst1107I GTATAC 1 cut(s) 1574
Bst2UI CCWGG 2 cut(s) 908, 2258
Bst4CI ACNGT 8 cut(s) 138, 217, 1059, 1093, 1372, 1465, 1541, 1715
BstC8I GCNNGC 2 cut(s) 148, 1696
BstF5I GGATG 3 cut(s) 163, 475, 1664
BstHHI GCGC 1 cut(s) 2191
BstKTI GATC 7 cut(s) 35, 300, 349, 465, 1010, 1328, 1524
BstMBI GATC 7 cut(s) 32, 297, 346, 462, 1007, 1325, 1521
BstMWI GCNNNNNNNGC 5 cut(s) 286, 971, 980, 1169, 1737
BstNI CCWGG 2 cut(s) 908, 2258
BstNSI RCATGY 2 cut(s) 59, 383
BstSCI CCNGG 2 cut(s) 906, 2256
BstSFI CTRYAG 2 cut(s) 1092, 2304
BstV1I GCAGC 4 cut(s) 130, 1273, 1660, 2290
BstV2I GAAGAC 1 cut(s) 333
BstX2I RGATCY 2 cut(s) 32, 1325
BstXI CCANNNNNNTGG 1 cut(s) 985
BstYI RGATCY 2 cut(s) 32, 1325
BstZ17I GTATAC 1 cut(s) 1574
BsuRI GGCC 2 cut(s) 1698, 1905
BtsCI GGATG 3 cut(s) 163, 475, 1664
BtsI GCAGTG 1 cut(s) 325
BtsIMutI CAGTG 8 cut(s) 325, 441, 985, 1089, 1344, 1546, 1720, 2181
BveI ACCTGC 1 cut(s) 71
Cac8I GCNNGC 2 cut(s) 148, 1696
CciI TCATGA 1 cut(s) 991
CfoI GCGC 1 cut(s) 2191
Cfr13I GGNCC 2 cut(s) 190, 1903
CseI GACGC 1 cut(s) 1553
CsiI ACCWGGT 1 cut(s) 906
Csp6I GTAC 2 cut(s) 59, 2169
CviAII CATG 4 cut(s) 56, 151, 380, 992
CviQI GTAC 2 cut(s) 59, 2169
DpnI GATC 7 cut(s) 34, 299, 348, 464, 1009, 1327, 1523
DpnII GATC 7 cut(s) 32, 297, 346, 462, 1007, 1325, 1521
EciI GGCGGA 1 cut(s) 815
Eco130I CCWWGG 2 cut(s) 768, 1762
Eco24I GRGCYC 1 cut(s) 29
Eco31I GGTCTC 2 cut(s) 758, 1126
Eco47I GGWCC 1 cut(s) 190
Eco57I CTGAAG 7 cut(s) 312, 564, 630, 696, 738, 1494, 2250
Eco88I CYCGRG 1 cut(s) 28
EcoO109I RGGNCCY 1 cut(s) 190
EcoRII CCWGG 2 cut(s) 906, 2256
EcoT14I CCWWGG 2 cut(s) 768, 1762
EcoT22I ATGCAT 1 cut(s) 1666
EcoT38I GRGCYC 1 cut(s) 29
ErhI CCWWGG 2 cut(s) 768, 1762
FaeI CATG 4 cut(s) 59, 154, 383, 995
FaqI GGGAC 2 cut(s) 386, 1283
FatI CATG 4 cut(s) 55, 150, 379, 991
FbaI TGATCA 1 cut(s) 346
FblI GTMKAC 2 cut(s) 1573, 2210
Fnu4HI GCNGC 4 cut(s) 144, 1262, 1649, 2304
FokI GGATG 3 cut(s) 170, 482, 1651
FriOI GRGCYC 1 cut(s) 29
Fsp4HI GCNGC 4 cut(s) 144, 1262, 1649, 2304
FspBI CTAG 2 cut(s) 1236, 1428
GlaI GCGC 1 cut(s) 2190
GluI GCNGC 4 cut(s) 144, 1262, 1649, 2304
GsuI CTGGAG 2 cut(s) 141, 1629
HaeIII GGCC 2 cut(s) 1698, 1905
HgaI GACGC 1 cut(s) 1553
HhaI GCGC 1 cut(s) 2191
Hin1II CATG 4 cut(s) 59, 154, 383, 995
Hin6I GCGC 1 cut(s) 2189
HinP1I GCGC 1 cut(s) 2189
HincII GTYRAC 2 cut(s) 1468, 1777
HindII GTYRAC 2 cut(s) 1468, 1777
HindIII AAGCTT 1 cut(s) 2157
HphI GGTGA 9 cut(s) 61, 586, 652, 718, 752, 760, 901, 935, 1406
Hpy166II GTNNAC 6 cut(s) 103, 1039, 1468, 1574, 1777, 2211
Hpy188III TCNNGA 4 cut(s) 120, 206, 272, 992
Hpy8I GTNNAC 6 cut(s) 103, 1039, 1468, 1574, 1777, 2211
HpyCH4III ACNGT 8 cut(s) 138, 217, 1059, 1093, 1372, 1465, 1541, 1715
HpyF10VI GCNNNNNNNGC 5 cut(s) 286, 971, 980, 1169, 1737
Hsp92II CATG 4 cut(s) 59, 154, 383, 995
HspAI GCGC 1 cut(s) 2189
Ksp22I TGATCA 1 cut(s) 346
Kzo9I GATC 7 cut(s) 32, 297, 346, 462, 1007, 1325, 1521
LguI GCTCTTC 2 cut(s) 270, 945
LmnI GCTCC 4 cut(s) 24, 122, 1133, 1610
Lsp1109I GCAGC 4 cut(s) 130, 1273, 1660, 2290
MabI ACCWGGT 1 cut(s) 906
MaeI CTAG 2 cut(s) 1236, 1428
MaeIII GTNAC 8 cut(s) 412, 538, 604, 670, 721, 1306, 1447, 1541
MalI GATC 7 cut(s) 34, 299, 348, 464, 1009, 1327, 1523
MboI GATC 7 cut(s) 32, 297, 346, 462, 1007, 1325, 1521
MfeI CAATTG 1 cut(s) 1137
MflI RGATCY 2 cut(s) 32, 1325
MhlI GDGCHC 1 cut(s) 29
MluCI AATT 6 cut(s) 168, 1137, 1432, 1636, 1786, 1913
MlyI GAGTC 5 cut(s) 802, 1280, 1352, 1772, 2216
Mph1103I ATGCAT 1 cut(s) 1666
MseI TTAA 3 cut(s) 429, 552, 618
MslI CAYNNNNRTG 2 cut(s) 1094, 2295
MspR9I CCNGG 2 cut(s) 908, 2258
MunI CAATTG 1 cut(s) 1137
MvaI CCWGG 2 cut(s) 908, 2258
MwoI GCNNNNNNNGC 5 cut(s) 286, 971, 980, 1169, 1737
NdeII GATC 7 cut(s) 32, 297, 346, 462, 1007, 1325, 1521
NlaIII CATG 4 cut(s) 59, 154, 383, 995
NlaIV GGNNCC 3 cut(s) 26, 124, 1228
NmuCI GTSAC 5 cut(s) 412, 721, 1306, 1447, 1541
NsiI ATGCAT 1 cut(s) 1666
NspI RCATGY 2 cut(s) 59, 383
OliI CACNNNNGTG 1 cut(s) 1094
PagI TCATGA 1 cut(s) 991
PaqCI CACCTGC 1 cut(s) 71
PciI ACATGT 1 cut(s) 379
PciSI GCTCTTC 2 cut(s) 270, 945
PflFI GACNNNGTC 1 cut(s) 2030
PkrI GCNGC 4 cut(s) 145, 1263, 1650, 2305
PleI GAGTC 5 cut(s) 801, 1280, 1352, 1772, 2215
PpsI GAGTC 5 cut(s) 801, 1280, 1352, 1772, 2215
PpuMI RGGWCCY 1 cut(s) 190
PscI ACATGT 1 cut(s) 379
PshBI ATTAAT 1 cut(s) 429
Psp5II RGGWCCY 1 cut(s) 190
Psp6I CCWGG 2 cut(s) 906, 2256
PspGI CCWGG 2 cut(s) 906, 2256
PspN4I GGNNCC 3 cut(s) 26, 124, 1228
PspPI GGNCC 2 cut(s) 190, 1903
PspPPI RGGWCCY 1 cut(s) 190
PstI CTGCAG 1 cut(s) 2308
PsuI RGATCY 2 cut(s) 32, 1325
PsyI GACNNNGTC 1 cut(s) 2030
RsaI GTAC 2 cut(s) 60, 2170
RsaNI GTAC 2 cut(s) 59, 2169
RseI CAYNNNNRTG 2 cut(s) 1094, 2295
SapI GCTCTTC 2 cut(s) 270, 945
SaqAI TTAA 3 cut(s) 429, 552, 618
SatI GCNGC 4 cut(s) 144, 1262, 1649, 2304
Sau3AI GATC 7 cut(s) 32, 297, 346, 462, 1007, 1325, 1521
Sau96I GGNCC 2 cut(s) 190, 1903
SchI GAGTC 5 cut(s) 802, 1280, 1352, 1772, 2216
ScrFI CCNGG 2 cut(s) 908, 2258
SduI GDGCHC 1 cut(s) 29
SexAI ACCWGGT 1 cut(s) 906
SfcI CTRYAG 2 cut(s) 1092, 2304
SinI GGWCC 1 cut(s) 190
SmiMI CAYNNNNRTG 2 cut(s) 1094, 2295
SmlI CTYRAG 2 cut(s) 1669, 2164
SmoI CTYRAG 2 cut(s) 1669, 2164
Sse9I AATT 6 cut(s) 168, 1137, 1432, 1636, 1786, 1913
SsiI CCGC 1 cut(s) 800
SspMI CTAG 2 cut(s) 1236, 1428
StyD4I CCNGG 2 cut(s) 906, 2256
StyI CCWWGG 2 cut(s) 768, 1762
TaaI ACNGT 8 cut(s) 138, 217, 1059, 1093, 1372, 1465, 1541, 1715
TaqII GACCGA 2 cut(s) 1997, 2024
TasI AATT 6 cut(s) 168, 1137, 1432, 1636, 1786, 1913
TatI WGTACW 2 cut(s) 58, 2168
Tru1I TTAA 3 cut(s) 429, 552, 618
Tru9I TTAA 3 cut(s) 429, 552, 618
TscAI CASTG 8 cut(s) 325, 448, 985, 1096, 1351, 1546, 1720, 2188
TseFI GTSAC 5 cut(s) 412, 721, 1306, 1447, 1541
TseI GCWGC 4 cut(s) 143, 1261, 1648, 2303
Tsp45I GTSAC 5 cut(s) 412, 721, 1306, 1447, 1541
TspRI CASTG 8 cut(s) 325, 448, 985, 1096, 1351, 1546, 1720, 2188
Tth111I GACNNNGTC 1 cut(s) 2030
VpaK11BI GGWCC 1 cut(s) 190
VspI ATTAAT 1 cut(s) 429
XceI RCATGY 2 cut(s) 59, 383
XcmI CCANNNNNNNNNTGG 1 cut(s) 1183
XmiI GTMKAC 2 cut(s) 1573, 2210
XspI CTAG 2 cut(s) 1236, 1428
Zsp2I ATGCAT 1 cut(s) 1666
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.