RLG00000017734
MYB Family

Myb-like protein X

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
20572556 .. 20575075
2520 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000017734

Sequence Viewer

Length: 2520 bp
ATGTTCAAGCTATCTCCTCGCAGGAACCCGAGATCGAAAGGTTTCAAGGTGAAGCATGTACTACAAATATGTCTTTTGGCGGGTGTCTGCATCTGGCTAGTTTACCAAGTCAAGCAGTCTCAAGTCAAGAAATCACAGTTGGCTGCAAGCATAAAAGATGGCGATGGAATTGTAAATTTAGGAAGAAAGGCCCTCAACCCTCTTCGGGAGGAAACTGTTGTTGAAGATGCAAGGCACAAGGAGGAGGAGGAAGAAGAAGAAGAAAACAGGAACGTGGAAGAGCCAAACAAGCCTGTAGAGATCAATAATGTTGGAGGAGGCAGTGGAGAAGACCAGATAAATGAAAATGATCAGCCTAAAGTTGAAGAAACAAGGGATGATCATGTTGATTCAGTAGAAGGAGATAAAGAAACGGAAGTGACAAGAGAGACTATTAATGAGGAGGGCACTGTGAATGAAGATGAACAGATCAAGGATGATGTGGATGGGAACACGAAGAATGAAGATGTCAAAGAGAACGAGACTGAGGAGAGCAATGAAAGGGTAATTGAAGAGGTCAAAGAGAAAGAAAGTGAAGAGGTGAAGGAGACTGAAGTGACCAAAGAAAAAGAAGGTGAAGAGGTGAAGGAGAATGAAGAGACCAAGGATGAAGGAACATCGGAGGAGAGTCAAGGGGAGGTCAACAAGGAGGAGGGGGAAGAGCACAATGAGACAGATAAAGAAAAGGAGGCAGAACAGAAGGAAGGTGATAAGATTGAACAGGTGATTTTAGCTGATGACCGGCTTCAAGATGGAGGTGAAAAACATAATGAGGAGGCAAGAGAAGAGCATTACAAGGCTGATGATGCTTCCAGTGCTGTGGCTCATGAAACTCAAAATGTATCAGCCAATGATGAACAAGGTGGTTCAGAAAACACTAATGAATCAGAGCAGGCAGTTGACAAAGAAAAGCAGGAGTTTCAGCAGGAGAACAATGCCAATAGCACTGTAGTGGATAAAGACCAAAACAAGTCGGTCTCAAACAGGGAAGCAGTGGAAAGCAGTGAAAAGAATGATACTAATAATGCTACCGTAACCGAAGTGGTTTCTGAGGAGAGTAATCCTTCCGAAACAGAGAATGGTTCTAAATCCAGTTCAACACTGGCCACAGAATCATTAGAGCAGCAGCAAGTGGACACCAAAAAAGATGGGTCTGCTCAGCAAACTGTTGTCACAGAGCACACTGAGAGATCTGATGTAGCTGCTAACAGTGGGCAACAAGACTCTGGCACAACAGCTTCCACCACAACTGAGAAGGGAGATACAACTAACGGAGAGTCCAAAAAAGATGACTCTGCTCAGCAAAATGTTGTCACAGAGCAAACCGAGAGATCTGATGTAGCTGCTAACAGTGAGCAACAAGACTCTGGCACAACAGCTTCCACCACAACTCAGAAGGGAGATACAACTAACGGAGAGTCCAAAAAAGATGACTCTGCTCAGCAAAATGTTGTCACAGAGCAAACCGAGAGATCTGATGTAGCTGCTAACAGTGAGCAACAAGACTCTGGAACAACAGCTTCCACCACAACTCAGAAGGGAGATACAACTAATGGAGAATCCACAGATACTTCTACTAATTCTGAATCAGTTGTGACAGATAATCACATTGTCAACTCCAATACATCTACAGAAAAAGAGAGTGGTTCTGCATCTTCAGACATGAACATTGTTCAAAAGACAAATAGTGCAGAAAGTATACTAACGCAGAAAACAAATGACAACGTAGATAATGGTGCAGGGCAACAAGTTGATTCTTCTAATTCTACAGAACAGCAAGAGAAAGATGCATCCTCAAGCACGGATAACAAATCTGATGCAGGCCAGAATGAAAATGACAGTGCTGTTCAGAACAACACAAACGACAATGCAAATGGCAATGGCAATACGGATGCAAACCATGGAGAATCAGGTGACTCTTCCAATTCTTCTGTATCACAAGAGAAAGAGGCATCTCAAAACACAGATAGTAATGCTGATTCTGAACAGAAAGAGAATGAGAATGTTGTTCAAAGCAATACTGATGACAATGCAGATGCGGGCCAGAAGGAATCAGTTAATACTTCAGTATTCTCAGACACCAATGCTGAGACGGGGGATAATCAAAAGGAGAATGTCGCTCAGAGCAACGCAAATGAGAATGTGGTCCAGAGCAACACAAATGAGAATGTCGTTCAGAGCAACGTGAATGAGAATGTCGGTCACAGCAACGCAAATGAGAATGTCGGTCAGAGCACCGCAAATGAGAATGTCGTTCAGAGCAACACAAAAGAGAATGAAGGTGCAGGCAGAGAAGAATCTGGCAATGCTCAGAAGGAGAGTGAAGCTTCAACAAGCACAAATGACAACACCGAGGCACAGAATGTCAATGTTGATTCTTCAAATTCTTCGATCCCTGAAGAAGAGAAAGAGGCTCGTATAGACCTGGACACTTTGCCAGAAAGCAAAGTTTCAGTTCATAACAATGATGCTGCAGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

840

Amino Acids

90.88

Weight (kDa)

4.22

Isoelectric Point (pI)

46.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 1738
AciI CCGC 3 cut(s) 80, 2078, 2277
AclWI GGATC 1 cut(s) 2425
AcoI YGGCCR 1 cut(s) 1143
AcsI RAATTY 2 cut(s) 175, 2422
AcuI CTGAAG 4 cut(s) 612, 1680, 2088, 2457
AfaI GTAC 1 cut(s) 60
AfiI CCNNNNNNNGG 1 cut(s) 205
AjnI CCWGG 1 cut(s) 2463
AjuI GAANNNNNNNTTGG 2 cut(s) 122, 154
AleI CACNNNNGTG 1 cut(s) 989
AluBI AGCT 9 cut(s) 10, 773, 1241, 1277, 1382, 1418, 1523, 1559, 2366
AluI AGCT 9 cut(s) 10, 773, 1241, 1277, 1382, 1418, 1523, 1559, 2366
Alw21I GWGCWC 3 cut(s) 705, 1221, 2276
Alw26I GTCTC 8 cut(s) 123, 422, 515, 581, 632, 704, 1021, 2123
AlwI GGATC 1 cut(s) 2425
Ama87I CYCGRG 1 cut(s) 28
AoxI GGCC 4 cut(s) 189, 1143, 1861, 2080
ApeKI GCWGC 7 cut(s) 143, 1162, 1165, 1241, 1382, 1523, 2510
ApoI RAATTY 2 cut(s) 175, 2422
AseI ATTAAT 1 cut(s) 435
Asp700I GAANNNNTTC 1 cut(s) 41
AspS9I GGNCC 3 cut(s) 190, 2080, 2185
AsuHPI GGTGA 8 cut(s) 61, 592, 626, 634, 758, 775, 809, 1964
AvaI CYCGRG 1 cut(s) 28
AvaII GGWCC 1 cut(s) 2185
BaeGI GKGCMC 1 cut(s) 449
BalI TGGCCA 1 cut(s) 1145
BbsI GAAGAC 1 cut(s) 336
Bbv12I GWGCWC 3 cut(s) 705, 1221, 2276
BbvI GCAGC 7 cut(s) 130, 1174, 1177, 1228, 1369, 1510, 2497
BccI CCATC 5 cut(s) 152, 158, 479, 785, 1181
BciT130I CCWGG 1 cut(s) 2465
BclI TGATCA 2 cut(s) 349, 379
BcoDI GTCTC 8 cut(s) 123, 422, 515, 581, 632, 704, 1021, 2123
BfaI CTAG 1 cut(s) 98
BfmI CTRYAG 5 cut(s) 294, 987, 1668, 1806, 2511
BglII AGATCT 3 cut(s) 1229, 1370, 1511
BisI GCNGC 7 cut(s) 144, 1163, 1166, 1242, 1383, 1524, 2511
BlpI GCTNAGC 3 cut(s) 1197, 1338, 1479
BlsI GCNGC 7 cut(s) 145, 1164, 1167, 1243, 1384, 1525, 2512
Bme1390I CCNGG 1 cut(s) 2465
Bme18I GGWCC 1 cut(s) 2185
BmeT110I CYCGRG 1 cut(s) 28
BmgT120I GGNCC 3 cut(s) 190, 2080, 2185
BmiI GGNNCC 1 cut(s) 26
BmrFI CCNGG 1 cut(s) 2465
BpiI GAAGAC 1 cut(s) 336
Bpu1102I GCTNAGC 3 cut(s) 1197, 1338, 1479
BpuEI CTTGAG 2 cut(s) 105, 1819
BsaI GGTCTC 2 cut(s) 632, 1021
BsaJI CCNNGG 3 cut(s) 642, 1939, 2391
Bsc4I CCNNNNNNNGG 1 cut(s) 205
Bse118I RCCGGY 1 cut(s) 780
Bse1I ACTGG 3 cut(s) 852, 1131, 1146
Bse3DI GCAATG 3 cut(s) 541, 1924, 2350
BseBI CCWGG 1 cut(s) 2465
BseDI CCNNGG 3 cut(s) 642, 1939, 2391
BseGI GGATG 6 cut(s) 382, 481, 490, 652, 1829, 1936
BseLI CCNNNNNNNGG 1 cut(s) 205
BseMI GCAATG 3 cut(s) 541, 1924, 2350
BseNI ACTGG 3 cut(s) 852, 1131, 1146
BseSI GKGCMC 1 cut(s) 449
BseXI GCAGC 7 cut(s) 130, 1174, 1177, 1228, 1369, 1510, 2497
BsgI GTGCAG 3 cut(s) 1749, 1797, 2343
BshFI GGCC 4 cut(s) 191, 1145, 1863, 2082
BsiHKAI GWGCWC 3 cut(s) 705, 1221, 2276
BsiHKCI CYCGRG 1 cut(s) 28
BsiSI CCGG 1 cut(s) 781
BslI CCNNNNNNNGG 1 cut(s) 205
BsmAI GTCTC 8 cut(s) 123, 422, 515, 581, 632, 704, 1021, 2123
BsmBI CGTCTC 1 cut(s) 2123
BsnI GGCC 4 cut(s) 191, 1145, 1863, 2082
Bso31I GGTCTC 2 cut(s) 632, 1021
BsoBI CYCGRG 1 cut(s) 28
Bsp1286I GDGCHC 4 cut(s) 449, 705, 1221, 2276
Bsp143I GATC 9 cut(s) 32, 300, 349, 379, 468, 1229, 1370, 1511, 2430
Bsp1720I GCTNAGC 3 cut(s) 1197, 1338, 1479
Bsp19I CCATGG 1 cut(s) 1939
BspACI CCGC 3 cut(s) 80, 2078, 2277
BspANI GGCC 4 cut(s) 191, 1145, 1863, 2082
BspHI TCATGA 1 cut(s) 865
BspLI GGNNCC 1 cut(s) 26
BspMAI CTGCAG 1 cut(s) 2515
BspPI GGATC 1 cut(s) 2425
BspQI GCTCTTC 3 cut(s) 273, 693, 819
BspTNI GGTCTC 2 cut(s) 632, 1021
BsrDI GCAATG 3 cut(s) 541, 1924, 2350
BsrFI RCCGGY 1 cut(s) 780
BsrI ACTGG 3 cut(s) 852, 1131, 1146
BssAI RCCGGY 1 cut(s) 780
BssECI CCNNGG 3 cut(s) 642, 1939, 2391
BssMI GATC 9 cut(s) 32, 300, 349, 379, 468, 1229, 1370, 1511, 2430
BssNAI GTATAC 1 cut(s) 1739
BssT1I CCWWGG 2 cut(s) 642, 1939
Bst1107I GTATAC 1 cut(s) 1739
Bst2UI CCWGG 1 cut(s) 2465
BstC8I GCNNGC 5 cut(s) 148, 933, 1861, 2080, 2326
BstDSI CCRYGG 1 cut(s) 1939
BstF5I GGATG 6 cut(s) 382, 481, 490, 652, 1829, 1936
BstKTI GATC 9 cut(s) 35, 303, 352, 382, 471, 1232, 1373, 1514, 2433
BstMAI GTCTC 8 cut(s) 123, 422, 515, 581, 632, 704, 1021, 2123
BstMBI GATC 9 cut(s) 32, 300, 349, 379, 468, 1229, 1370, 1511, 2430
BstMWI GCNNNNNNNGC 3 cut(s) 289, 845, 854
BstNI CCWGG 1 cut(s) 2465
BstNSI RCATGY 1 cut(s) 59
BstSCI CCNGG 1 cut(s) 2463
BstSFI CTRYAG 5 cut(s) 294, 987, 1668, 1806, 2511
BstSLI GKGCMC 1 cut(s) 449
BstV1I GCAGC 7 cut(s) 130, 1174, 1177, 1228, 1369, 1510, 2497
BstV2I GAAGAC 1 cut(s) 336
BstX2I RGATCY 3 cut(s) 1229, 1370, 1511
BstXI CCANNNNNNTGG 1 cut(s) 859
BstYI RGATCY 3 cut(s) 1229, 1370, 1511
BstZ17I GTATAC 1 cut(s) 1739
BsuRI GGCC 4 cut(s) 191, 1145, 1863, 2082
BtgI CCRYGG 1 cut(s) 1939
BtgZI GCGATG 1 cut(s) 177
BtsCI GGATG 6 cut(s) 382, 481, 490, 652, 1829, 1936
BtsI GCAGTG 3 cut(s) 328, 1038, 1048
Cac8I GCNNGC 5 cut(s) 148, 933, 1861, 2080, 2326
CciI TCATGA 1 cut(s) 865
Cfr10I RCCGGY 1 cut(s) 780
Cfr13I GGNCC 3 cut(s) 190, 2080, 2185
Csp6I GTAC 1 cut(s) 59
CviAII CATG 5 cut(s) 56, 383, 866, 1702, 1940
CviQI GTAC 1 cut(s) 59
DpnI GATC 9 cut(s) 34, 302, 351, 381, 470, 1231, 1372, 1513, 2432
DpnII GATC 9 cut(s) 32, 300, 349, 379, 468, 1229, 1370, 1511, 2430
EaeI YGGCCR 1 cut(s) 1143
Eco130I CCWWGG 2 cut(s) 642, 1939
Eco31I GGTCTC 2 cut(s) 632, 1021
Eco47I GGWCC 1 cut(s) 2185
Eco57I CTGAAG 4 cut(s) 612, 1680, 2088, 2457
Eco88I CYCGRG 1 cut(s) 28
EcoO109I RGGNCCY 1 cut(s) 190
EcoRII CCWGG 1 cut(s) 2463
EcoT14I CCWWGG 2 cut(s) 642, 1939
EcoT22I ATGCAT 1 cut(s) 1831
ErhI CCWWGG 2 cut(s) 642, 1939
Esp3I CGTCTC 1 cut(s) 2123
FaeI CATG 5 cut(s) 59, 386, 869, 1705, 1943
FatI CATG 5 cut(s) 55, 382, 865, 1701, 1939
FauI CCCGC 2 cut(s) 73, 2071
FbaI TGATCA 2 cut(s) 349, 379
FblI GTMKAC 1 cut(s) 1738
Fnu4HI GCNGC 7 cut(s) 144, 1163, 1166, 1242, 1383, 1524, 2511
FokI GGATG 6 cut(s) 389, 488, 497, 659, 1816, 1943
Fsp4HI GCNGC 7 cut(s) 144, 1163, 1166, 1242, 1383, 1524, 2511
FspBI CTAG 1 cut(s) 98
GluI GCNGC 7 cut(s) 144, 1163, 1166, 1242, 1383, 1524, 2511
HaeIII GGCC 4 cut(s) 191, 1145, 1863, 2082
HapII CCGG 1 cut(s) 781
Hin1II CATG 5 cut(s) 59, 386, 869, 1705, 1943
HincII GTYRAC 3 cut(s) 682, 940, 1654
HindII GTYRAC 3 cut(s) 682, 940, 1654
HindIII AAGCTT 1 cut(s) 2364
HpaII CCGG 1 cut(s) 781
HphI GGTGA 8 cut(s) 61, 592, 626, 634, 758, 775, 809, 1964
Hpy166II GTNNAC 6 cut(s) 103, 682, 940, 1174, 1654, 1739
Hpy188III TCNNGA 6 cut(s) 127, 206, 788, 866, 1548, 2188
Hpy8I GTNNAC 6 cut(s) 103, 682, 940, 1174, 1654, 1739
HpyCH4IV ACGT 3 cut(s) 273, 1764, 2223
HpyF10VI GCNNNNNNNGC 3 cut(s) 289, 845, 854
HpySE526I ACGT 3 cut(s) 273, 1764, 2223
Hsp92II CATG 5 cut(s) 59, 386, 869, 1705, 1943
Ksp22I TGATCA 2 cut(s) 349, 379
Kzo9I GATC 9 cut(s) 32, 300, 349, 379, 468, 1229, 1370, 1511, 2430
LguI GCTCTTC 3 cut(s) 273, 693, 819
Lsp1109I GCAGC 7 cut(s) 130, 1174, 1177, 1228, 1369, 1510, 2497
MaeI CTAG 1 cut(s) 98
MaeII ACGT 3 cut(s) 273, 1764, 2223
MaeIII GTNAC 9 cut(s) 418, 595, 1072, 1210, 1351, 1492, 1633, 1952, 2240
MalI GATC 9 cut(s) 34, 302, 351, 381, 470, 1231, 1372, 1513, 2432
MboI GATC 9 cut(s) 32, 300, 349, 379, 468, 1229, 1370, 1511, 2430
MflI RGATCY 3 cut(s) 1229, 1370, 1511
MhlI GDGCHC 4 cut(s) 449, 705, 1221, 2276
MlsI TGGCCA 1 cut(s) 1145
MluCI AATT 7 cut(s) 168, 175, 546, 1618, 1801, 1963, 2422
MluNI TGGCCA 1 cut(s) 1145
MlyI GAGTC 9 cut(s) 676, 1256, 1325, 1325, 1397, 1466, 1466, 1538, 1949
MmeI TCCRAC 1 cut(s) 292
Mox20I TGGCCA 1 cut(s) 1145
Mph1103I ATGCAT 1 cut(s) 1831
MroXI GAANNNNTTC 1 cut(s) 41
MscI TGGCCA 1 cut(s) 1145
MseI TTAA 2 cut(s) 435, 2097
MslI CAYNNNNRTG 2 cut(s) 989, 2502
Msp20I TGGCCA 1 cut(s) 1145
MspI CCGG 1 cut(s) 781
MspR9I CCNGG 1 cut(s) 2465
MvaI CCWGG 1 cut(s) 2465
MwoI GCNNNNNNNGC 3 cut(s) 289, 845, 854
NcoI CCATGG 1 cut(s) 1939
NdeII GATC 9 cut(s) 32, 300, 349, 379, 468, 1229, 1370, 1511, 2430
NlaIII CATG 5 cut(s) 59, 386, 869, 1705, 1943
NlaIV GGNNCC 1 cut(s) 26
NmuCI GTSAC 8 cut(s) 418, 595, 1210, 1351, 1492, 1633, 1952, 2240
NsiI ATGCAT 1 cut(s) 1831
NspI RCATGY 1 cut(s) 59
OliI CACNNNNGTG 1 cut(s) 989
PagI TCATGA 1 cut(s) 865
PciSI GCTCTTC 3 cut(s) 273, 693, 819
PdmI GAANNNNTTC 1 cut(s) 41
PkrI GCNGC 7 cut(s) 145, 1164, 1167, 1243, 1384, 1525, 2512
PleI GAGTC 9 cut(s) 675, 1256, 1324, 1325, 1397, 1465, 1466, 1538, 1949
PpsI GAGTC 9 cut(s) 675, 1256, 1324, 1325, 1397, 1465, 1466, 1538, 1949
PshBI ATTAAT 1 cut(s) 435
Psp6I CCWGG 1 cut(s) 2463
PspGI CCWGG 1 cut(s) 2463
PspN4I GGNNCC 1 cut(s) 26
PspPI GGNCC 3 cut(s) 190, 2080, 2185
PstI CTGCAG 1 cut(s) 2515
PsuI RGATCY 3 cut(s) 1229, 1370, 1511
RsaI GTAC 1 cut(s) 60
RsaNI GTAC 1 cut(s) 59
RseI CAYNNNNRTG 2 cut(s) 989, 2502
SapI GCTCTTC 3 cut(s) 273, 693, 819
SaqAI TTAA 2 cut(s) 435, 2097
SatI GCNGC 7 cut(s) 144, 1163, 1166, 1242, 1383, 1524, 2511
Sau3AI GATC 9 cut(s) 32, 300, 349, 379, 468, 1229, 1370, 1511, 2430
Sau96I GGNCC 3 cut(s) 190, 2080, 2185
SchI GAGTC 9 cut(s) 676, 1256, 1325, 1325, 1397, 1466, 1466, 1538, 1949
ScrFI CCNGG 1 cut(s) 2465
SduI GDGCHC 4 cut(s) 449, 705, 1221, 2276
SfcI CTRYAG 5 cut(s) 294, 987, 1668, 1806, 2511
SinI GGWCC 1 cut(s) 2185
SmiMI CAYNNNNRTG 2 cut(s) 989, 2502
SmlI CTYRAG 2 cut(s) 120, 1834
SmoI CTYRAG 2 cut(s) 120, 1834
Sse9I AATT 7 cut(s) 168, 175, 546, 1618, 1801, 1963, 2422
SsiI CCGC 3 cut(s) 80, 2078, 2277
SspMI CTAG 1 cut(s) 98
StyD4I CCNGG 1 cut(s) 2463
StyI CCWWGG 2 cut(s) 642, 1939
TaiI ACGT 3 cut(s) 276, 1767, 2226
TaqI TCGA 2 cut(s) 35, 2429
TaqII GACCGA 3 cut(s) 1003, 2228, 2255
TasI AATT 7 cut(s) 168, 175, 546, 1618, 1801, 1963, 2422
TatI WGTACW 1 cut(s) 58
Tru1I TTAA 2 cut(s) 435, 2097
Tru9I TTAA 2 cut(s) 435, 2097
TseFI GTSAC 8 cut(s) 418, 595, 1210, 1351, 1492, 1633, 1952, 2240
TseI GCWGC 7 cut(s) 143, 1162, 1165, 1241, 1382, 1523, 2510
Tsp45I GTSAC 8 cut(s) 418, 595, 1210, 1351, 1492, 1633, 1952, 2240
TspGWI ACGGA 5 cut(s) 428, 1326, 1467, 1856, 1943
VpaK11BI GGWCC 1 cut(s) 2185
VspI ATTAAT 1 cut(s) 435
XapI RAATTY 2 cut(s) 175, 2422
XceI RCATGY 1 cut(s) 59
XcmI CCANNNNNNNNNTGG 1 cut(s) 1138
XmiI GTMKAC 1 cut(s) 1738
XmnI GAANNNNTTC 1 cut(s) 41
XspI CTAG 1 cut(s) 98
Zsp2I ATGCAT 1 cut(s) 1831
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.