RchiOBHm_Chr2g0109401
MYB Family

Myb-like protein X

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
20770194 .. 20773832
3639 bp
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UTR
Exon/CDS
Intron
PRQ48322

Sequence Viewer

Length: 2190 bp
ATGTTCAAGCTATCTCCTCGCAGGAACCCGAGATCTAAAGGTTTCAAGGTGAAGCATGTACTACAAATATGTCTTTTGGCGGGTGTCTGCATCTGGCTAGTTTACCAAGTCAAGCAGTCTCAAGTCAAGAAATCACAGTTGGCTGCAAGCATAAAAGATGGCAATGGAATTGTAAATTTAGGAAGAAAGGCCCTCAACCCTCTTCGGGAGGAAACTGTTGTTGAAGATGCAAGGCACAAGGAGGAGGAGGAAGAAGAAGAAAACAGGAATGTGGAAGAGCCAAACAAGCCTGTAGAGATCGATAATGTTGGAGGAGGCAGTGGAGAAGACCAGATAAATGAAAATGATCAGCCTAAAGTTGAAGAAACGAGGGATGATCATGTTGATTCAGTAGAAGGAGATAAAGAAACGGAAGTGACAAGAGAGACTATTAATGAGGAGGGCACTGTGAATGAAGATGAACAGATCAAGGATGATGTGGATGGAAACACAAAGAATGAAGATGTCAAAGAGAATGAGACTGAGGAGAGCAATGAAAGGGTAACTGAAGAGGTCAAAGAGAAAGAAAGTGAAGAGGTGAAGGAGACTGAAGTGACCAAAGAAAAAGAAGGTGAAGAGGTGAAGGAGAATGAAGAGACCAAGGAGGAAGGAACATCGGAGGAGAGTCAAGGGGAGGTCAATAAGGAGGAGGGGGAAGAGCACAATGAGACAGATAAAGAAAAGGAGGCAGAAGAGAAGGAAGGTGATAAGATTGAACAGGTGATTTTAGCTGATGACCGGCTTCAAGATGGAGGTGAAAAACATAATGAGGAGGCAAGAGAAGAGCATTACAAGGCTGATGATGCTTCCAGTGCTGTGGCTCATGAAACTCAAAATGTATCAGCCAATAATGAACAAGGTGGTTCAGAAAACACTAATGAATCAGAGCAGTCAGTTGACAAAGAAAAGCAGGAGTTTGAGCGGGAGAACAATGCAAATAGCACTGTAGTGGATACAGACCAAAACAAGTCGGTCTCAAATGGGGAAGCAGTGGAAAGCGGTGAAAAGAATGATACTAATAATGCTACCGTAACCAAAGTGGTTTCTGAGGGTAATCCTTCTGAAACAGAGAATGGTTCTAAATCCAGTTCAACACTGGCCACAGAATCATTAGAGCAGCAGCAAGTGGACACCAAAAAAGATGAGTCTGCTCAGCAAACTGTTGTCACAGAGTACACTGAGAGATCTGATGTAGCTGCTAACACTGCTAACAGTGAGCAACAAGACTCTGGCACAACAGCTTCCACCACAACTCAGAAGGGAGATACAACTAATGGAGAATCCACAGATACTTCTACTAATTCTGAATCAGTTGTGACAGATAATCAGATTGTCAACTCCAATACATCTACAGAAAAAGAGAGTGGTTCTGCATCTTCAGACATGAACATTGTTCAAAAGACAAATAGTGACACTGTGGAAGAAGGAACACAAGAAAGTATACTTACGCAGAAAACAAATGACAATGTAGATAATGGTGCAGGGCAACAAGTTGATTCTTCTAATTCTACAGAACAGCAAGAGAAAGATGCATCCTCAAGCACAGATAACAAATCTGATGCAGGCCAGAATGAAAATGACAGTGCTGTTCAGAACAACACAAACGACAATGCAAATAGCAATGGCAATACGGATGCAAACCATGGAGAATCAGGTGACTCTTCCAATTCTTCTGTATCACAAGAGAAAGAGGCATCTCAAAACACAGATAGTAATGCTGATTCAGAACAGAAAGAGAATGAGAATGTTGTTCAAAGCAATACTGATGACAATGCAGATGCGGGCCAAAAGGAATCAGTTAATACTTCAGTATTCTCAGACACCAATGCTGAGACGGGGGATAGTCAAAAGGAGAATGTCGCTCAGAGCAATGCAAATGAGAATGTGGTCCAGAGCAACACAAATGAGAATGTCGTTCAGAGCAACACAAATGAGAATGTCGTTCAGAGCAACGCAAATGAGAATGTGGTCCAGAGCAACACAAATGAGAATGTCGTTCAGAGCAATGAAGCTTCAACAAGCACAAATGACAACACTGAGGCACAGAATGTCAATGTTGATTCTTCAAATTCTTCGATCCCTGAAGAAGAGAAAAAGGCTCGTATAGACCTGGACACTTTGCCAGAAAGCAAAGTTGATGCTGCAGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

729

Amino Acids

79.4

Weight (kDa)

4.19

Isoelectric Point (pI)

44.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 961
AccI GTMKAC 1 cut(s) 1480
AciI CCGC 4 cut(s) 80, 961, 1038, 1820
AclWI GGATC 1 cut(s) 2110
AcoI YGGCCR 1 cut(s) 1137
AcsI RAATTY 2 cut(s) 175, 2107
AcuI CTGAAG 5 cut(s) 567, 609, 1401, 1830, 2142
AfaI GTAC 2 cut(s) 60, 1214
AfiI CCNNNNNNNGG 1 cut(s) 205
AjnI CCWGG 1 cut(s) 2148
AjuI GAANNNNNNNTTGG 2 cut(s) 122, 154
AleI CACNNNNGTG 1 cut(s) 986
AluBI AGCT 5 cut(s) 10, 770, 1235, 1280, 2051
AluI AGCT 5 cut(s) 10, 770, 1235, 1280, 2051
Alw21I GWGCWC 1 cut(s) 702
Alw26I GTCTC 8 cut(s) 123, 419, 512, 578, 629, 701, 1018, 1865
AlwI GGATC 1 cut(s) 2110
Ama87I CYCGRG 1 cut(s) 28
AoxI GGCC 4 cut(s) 189, 1137, 1603, 1822
ApeKI GCWGC 5 cut(s) 143, 1156, 1159, 1235, 2180
ApoI RAATTY 2 cut(s) 175, 2107
AseI ATTAAT 1 cut(s) 432
AspS9I GGNCC 4 cut(s) 190, 1822, 1927, 2008
AsuHPI GGTGA 9 cut(s) 61, 589, 623, 631, 755, 772, 806, 1052, 1706
AvaI CYCGRG 1 cut(s) 28
AvaII GGWCC 2 cut(s) 1927, 2008
BaeGI GKGCMC 1 cut(s) 446
BalI TGGCCA 1 cut(s) 1139
BbsI GAAGAC 1 cut(s) 333
Bbv12I GWGCWC 1 cut(s) 702
BbvI GCAGC 5 cut(s) 130, 1168, 1171, 1222, 2167
BccI CCATC 3 cut(s) 152, 476, 782
BciT130I CCWGG 1 cut(s) 2150
BciVI GTATCC 1 cut(s) 985
BclI TGATCA 2 cut(s) 346, 376
BcoDI GTCTC 8 cut(s) 123, 419, 512, 578, 629, 701, 1018, 1865
BfaI CTAG 1 cut(s) 98
BfmI CTRYAG 5 cut(s) 291, 984, 1389, 1548, 2181
BfuI GTATCC 1 cut(s) 985
BglII AGATCT 2 cut(s) 32, 1223
BisI GCNGC 5 cut(s) 144, 1157, 1160, 1236, 2181
BlpI GCTNAGC 1 cut(s) 1191
BlsI GCNGC 5 cut(s) 145, 1158, 1161, 1237, 2182
Bme1390I CCNGG 1 cut(s) 2150
Bme18I GGWCC 2 cut(s) 1927, 2008
BmeT110I CYCGRG 1 cut(s) 28
BmgT120I GGNCC 4 cut(s) 190, 1822, 1927, 2008
BmiI GGNNCC 1 cut(s) 26
BmrFI CCNGG 1 cut(s) 2150
BpiI GAAGAC 1 cut(s) 333
Bpu1102I GCTNAGC 1 cut(s) 1191
BpuEI CTTGAG 2 cut(s) 105, 1561
Bsa29I ATCGAT 1 cut(s) 300
BsaI GGTCTC 2 cut(s) 629, 1018
BsaJI CCNNGG 2 cut(s) 639, 1681
Bsc4I CCNNNNNNNGG 1 cut(s) 205
Bse118I RCCGGY 1 cut(s) 777
Bse1I ACTGG 3 cut(s) 849, 1125, 1140
Bse3DI GCAATG 5 cut(s) 169, 538, 1666, 1915, 2050
BseBI CCWGG 1 cut(s) 2150
BseCI ATCGAT 1 cut(s) 300
BseDI CCNNGG 2 cut(s) 639, 1681
BseGI GGATG 5 cut(s) 379, 478, 487, 1571, 1678
BseLI CCNNNNNNNGG 1 cut(s) 205
BseMI GCAATG 5 cut(s) 169, 538, 1666, 1915, 2050
BseMII CTCAG 9 cut(s) 513, 1077, 1205, 1209, 1307, 1860, 1869, 1916, 2067
BseNI ACTGG 3 cut(s) 849, 1125, 1140
BseRI GAGGAG 9 cut(s) 6, 257, 260, 327, 452, 539, 674, 701, 824
BseSI GKGCMC 1 cut(s) 446
BseXI GCAGC 5 cut(s) 130, 1168, 1171, 1222, 2167
BsgI GTGCAG 1 cut(s) 1539
BshFI GGCC 4 cut(s) 191, 1139, 1605, 1824
BshVI ATCGAT 1 cut(s) 300
BsiHKAI GWGCWC 1 cut(s) 702
BsiHKCI CYCGRG 1 cut(s) 28
BsiSI CCGG 1 cut(s) 778
BslI CCNNNNNNNGG 1 cut(s) 205
BsmAI GTCTC 8 cut(s) 123, 419, 512, 578, 629, 701, 1018, 1865
BsmBI CGTCTC 1 cut(s) 1865
BsnI GGCC 4 cut(s) 191, 1139, 1605, 1824
Bso31I GGTCTC 2 cut(s) 629, 1018
BsoBI CYCGRG 1 cut(s) 28
Bsp1286I GDGCHC 2 cut(s) 446, 702
Bsp143I GATC 7 cut(s) 32, 297, 346, 376, 465, 1223, 2115
Bsp1720I GCTNAGC 1 cut(s) 1191
Bsp19I CCATGG 1 cut(s) 1681
BspACI CCGC 4 cut(s) 80, 961, 1038, 1820
BspANI GGCC 4 cut(s) 191, 1139, 1605, 1824
BspCNI CTCAG 9 cut(s) 514, 1078, 1204, 1210, 1306, 1861, 1868, 1915, 2068
BspDI ATCGAT 1 cut(s) 300
BspHI TCATGA 1 cut(s) 862
BspLI GGNNCC 1 cut(s) 26
BspMAI CTGCAG 1 cut(s) 2185
BspPI GGATC 1 cut(s) 2110
BspQI GCTCTTC 3 cut(s) 270, 690, 816
BspTNI GGTCTC 2 cut(s) 629, 1018
BsrBI CCGCTC 1 cut(s) 961
BsrDI GCAATG 5 cut(s) 169, 538, 1666, 1915, 2050
BsrFI RCCGGY 1 cut(s) 777
BsrI ACTGG 3 cut(s) 849, 1125, 1140
BssAI RCCGGY 1 cut(s) 777
BssECI CCNNGG 2 cut(s) 639, 1681
BssMI GATC 7 cut(s) 32, 297, 346, 376, 465, 1223, 2115
BssNAI GTATAC 1 cut(s) 1481
BssT1I CCWWGG 2 cut(s) 639, 1681
Bst1107I GTATAC 1 cut(s) 1481
Bst2UI CCWGG 1 cut(s) 2150
Bst4CI ACNGT 9 cut(s) 138, 217, 448, 985, 1069, 1201, 1253, 1456, 1622
BstC8I GCNNGC 3 cut(s) 148, 1603, 1822
BstDEI CTNAG 9 cut(s) 522, 1086, 1191, 1218, 1293, 1855, 1869, 1902, 2076
BstDSI CCRYGG 1 cut(s) 1681
BstF5I GGATG 5 cut(s) 379, 478, 487, 1571, 1678
BstKTI GATC 7 cut(s) 35, 300, 349, 379, 468, 1226, 2118
BstMAI GTCTC 8 cut(s) 123, 419, 512, 578, 629, 701, 1018, 1865
BstMBI GATC 7 cut(s) 32, 297, 346, 376, 465, 1223, 2115
BstMWI GCNNNNNNNGC 4 cut(s) 286, 842, 851, 1244
BstNI CCWGG 1 cut(s) 2150
BstNSI RCATGY 1 cut(s) 59
BstSCI CCNGG 1 cut(s) 2148
BstSFI CTRYAG 5 cut(s) 291, 984, 1389, 1548, 2181
BstSLI GKGCMC 1 cut(s) 446
BstV1I GCAGC 5 cut(s) 130, 1168, 1171, 1222, 2167
BstV2I GAAGAC 1 cut(s) 333
BstX2I RGATCY 2 cut(s) 32, 1223
BstXI CCANNNNNNTGG 1 cut(s) 856
BstYI RGATCY 2 cut(s) 32, 1223
BstZ17I GTATAC 1 cut(s) 1481
Bsu15I ATCGAT 1 cut(s) 300
BsuI GTATCC 1 cut(s) 985
BsuRI GGCC 4 cut(s) 191, 1139, 1605, 1824
BsuTUI ATCGAT 1 cut(s) 300
BtgI CCRYGG 1 cut(s) 1681
BtsCI GGATG 5 cut(s) 379, 478, 487, 1571, 1678
BtsI GCAGTG 4 cut(s) 325, 1035, 1242, 2190
Cac8I GCNNGC 3 cut(s) 148, 1603, 1822
CciI TCATGA 1 cut(s) 862
Cfr10I RCCGGY 1 cut(s) 777
Cfr13I GGNCC 4 cut(s) 190, 1822, 1927, 2008
ClaI ATCGAT 1 cut(s) 300
Csp6I GTAC 2 cut(s) 59, 1213
CviAII CATG 5 cut(s) 56, 380, 863, 1423, 1682
CviQI GTAC 2 cut(s) 59, 1213
DdeI CTNAG 9 cut(s) 522, 1086, 1191, 1218, 1293, 1855, 1869, 1902, 2076
DpnI GATC 7 cut(s) 34, 299, 348, 378, 467, 1225, 2117
DpnII GATC 7 cut(s) 32, 297, 346, 376, 465, 1223, 2115
EaeI YGGCCR 1 cut(s) 1137
Eco130I CCWWGG 2 cut(s) 639, 1681
Eco31I GGTCTC 2 cut(s) 629, 1018
Eco47I GGWCC 2 cut(s) 1927, 2008
Eco57I CTGAAG 5 cut(s) 567, 609, 1401, 1830, 2142
Eco88I CYCGRG 1 cut(s) 28
EcoO109I RGGNCCY 1 cut(s) 190
EcoRII CCWGG 1 cut(s) 2148
EcoT14I CCWWGG 2 cut(s) 639, 1681
EcoT22I ATGCAT 1 cut(s) 1573
ErhI CCWWGG 2 cut(s) 639, 1681
Esp3I CGTCTC 1 cut(s) 1865
FaeI CATG 5 cut(s) 59, 383, 866, 1426, 1685
FatI CATG 5 cut(s) 55, 379, 862, 1422, 1681
FauI CCCGC 3 cut(s) 73, 954, 1813
FbaI TGATCA 2 cut(s) 346, 376
FblI GTMKAC 1 cut(s) 1480
Fnu4HI GCNGC 5 cut(s) 144, 1157, 1160, 1236, 2181
FokI GGATG 5 cut(s) 386, 485, 494, 1558, 1685
Fsp4HI GCNGC 5 cut(s) 144, 1157, 1160, 1236, 2181
FspBI CTAG 1 cut(s) 98
GluI GCNGC 5 cut(s) 144, 1157, 1160, 1236, 2181
HaeIII GGCC 4 cut(s) 191, 1139, 1605, 1824
HapII CCGG 1 cut(s) 778
Hin1II CATG 5 cut(s) 59, 383, 866, 1426, 1685
HincII GTYRAC 2 cut(s) 937, 1375
HindII GTYRAC 2 cut(s) 937, 1375
HindIII AAGCTT 1 cut(s) 2049
HpaII CCGG 1 cut(s) 778
HphI GGTGA 9 cut(s) 61, 589, 623, 631, 755, 772, 806, 1052, 1706
Hpy166II GTNNAC 6 cut(s) 103, 937, 1168, 1215, 1375, 1481
Hpy188III TCNNGA 6 cut(s) 127, 206, 785, 863, 1930, 2011
Hpy8I GTNNAC 6 cut(s) 103, 937, 1168, 1215, 1375, 1481
HpyCH4III ACNGT 9 cut(s) 138, 217, 448, 985, 1069, 1201, 1253, 1456, 1622
HpyF10VI GCNNNNNNNGC 4 cut(s) 286, 842, 851, 1244
HpyF3I CTNAG 9 cut(s) 522, 1086, 1191, 1218, 1293, 1855, 1869, 1902, 2076
Hsp92II CATG 5 cut(s) 59, 383, 866, 1426, 1685
Ksp22I TGATCA 2 cut(s) 346, 376
Kzo9I GATC 7 cut(s) 32, 297, 346, 376, 465, 1223, 2115
LguI GCTCTTC 3 cut(s) 270, 690, 816
Lsp1109I GCAGC 5 cut(s) 130, 1168, 1171, 1222, 2167
MaeI CTAG 1 cut(s) 98
MaeIII GTNAC 8 cut(s) 415, 541, 592, 1069, 1204, 1354, 1448, 1694
MalI GATC 7 cut(s) 34, 299, 348, 378, 467, 1225, 2117
MbiI CCGCTC 1 cut(s) 961
MboI GATC 7 cut(s) 32, 297, 346, 376, 465, 1223, 2115
MflI RGATCY 2 cut(s) 32, 1223
MhlI GDGCHC 2 cut(s) 446, 702
MlsI TGGCCA 1 cut(s) 1139
MluCI AATT 6 cut(s) 168, 175, 1339, 1543, 1705, 2107
MluNI TGGCCA 1 cut(s) 1139
MlyI GAGTC 4 cut(s) 673, 1193, 1259, 1691
MmeI TCCRAC 1 cut(s) 289
Mox20I TGGCCA 1 cut(s) 1139
Mph1103I ATGCAT 1 cut(s) 1573
MscI TGGCCA 1 cut(s) 1139
MseI TTAA 2 cut(s) 432, 1839
MslI CAYNNNNRTG 1 cut(s) 986
Msp20I TGGCCA 1 cut(s) 1139
MspI CCGG 1 cut(s) 778
MspR9I CCNGG 1 cut(s) 2150
MvaI CCWGG 1 cut(s) 2150
MwoI GCNNNNNNNGC 4 cut(s) 286, 842, 851, 1244
NcoI CCATGG 1 cut(s) 1681
NdeII GATC 7 cut(s) 32, 297, 346, 376, 465, 1223, 2115
NlaIII CATG 5 cut(s) 59, 383, 866, 1426, 1685
NlaIV GGNNCC 1 cut(s) 26
NmuCI GTSAC 6 cut(s) 415, 592, 1204, 1354, 1448, 1694
NsiI ATGCAT 1 cut(s) 1573
NspI RCATGY 1 cut(s) 59
OliI CACNNNNGTG 1 cut(s) 986
PagI TCATGA 1 cut(s) 862
PciSI GCTCTTC 3 cut(s) 270, 690, 816
PkrI GCNGC 5 cut(s) 145, 1158, 1161, 1237, 2182
PleI GAGTC 4 cut(s) 672, 1192, 1259, 1691
PpsI GAGTC 4 cut(s) 672, 1192, 1259, 1691
PshBI ATTAAT 1 cut(s) 432
Psp6I CCWGG 1 cut(s) 2148
PspGI CCWGG 1 cut(s) 2148
PspN4I GGNNCC 1 cut(s) 26
PspPI GGNCC 4 cut(s) 190, 1822, 1927, 2008
PstI CTGCAG 1 cut(s) 2185
PsuI RGATCY 2 cut(s) 32, 1223
RsaI GTAC 2 cut(s) 60, 1214
RsaNI GTAC 2 cut(s) 59, 1213
RseI CAYNNNNRTG 1 cut(s) 986
SapI GCTCTTC 3 cut(s) 270, 690, 816
SaqAI TTAA 2 cut(s) 432, 1839
SatI GCNGC 5 cut(s) 144, 1157, 1160, 1236, 2181
Sau3AI GATC 7 cut(s) 32, 297, 346, 376, 465, 1223, 2115
Sau96I GGNCC 4 cut(s) 190, 1822, 1927, 2008
SchI GAGTC 4 cut(s) 673, 1193, 1259, 1691
ScrFI CCNGG 1 cut(s) 2150
SduI GDGCHC 2 cut(s) 446, 702
SfcI CTRYAG 5 cut(s) 291, 984, 1389, 1548, 2181
SinI GGWCC 2 cut(s) 1927, 2008
SmiMI CAYNNNNRTG 1 cut(s) 986
SmlI CTYRAG 2 cut(s) 120, 1576
SmoI CTYRAG 2 cut(s) 120, 1576
Sse9I AATT 6 cut(s) 168, 175, 1339, 1543, 1705, 2107
SsiI CCGC 4 cut(s) 80, 961, 1038, 1820
SspMI CTAG 1 cut(s) 98
StyD4I CCNGG 1 cut(s) 2148
StyI CCWWGG 2 cut(s) 639, 1681
TaaI ACNGT 9 cut(s) 138, 217, 448, 985, 1069, 1201, 1253, 1456, 1622
TaqI TCGA 2 cut(s) 300, 2114
TaqII GACCGA 1 cut(s) 1000
TasI AATT 6 cut(s) 168, 175, 1339, 1543, 1705, 2107
TatI WGTACW 2 cut(s) 58, 1212
Tru1I TTAA 2 cut(s) 432, 1839
Tru9I TTAA 2 cut(s) 432, 1839
TseFI GTSAC 6 cut(s) 415, 592, 1204, 1354, 1448, 1694
TseI GCWGC 5 cut(s) 143, 1156, 1159, 1235, 2180
Tsp45I GTSAC 6 cut(s) 415, 592, 1204, 1354, 1448, 1694
TspGWI ACGGA 2 cut(s) 425, 1685
VpaK11BI GGWCC 2 cut(s) 1927, 2008
VspI ATTAAT 1 cut(s) 432
XapI RAATTY 2 cut(s) 175, 2107
XceI RCATGY 1 cut(s) 59
XcmI CCANNNNNNNNNTGG 1 cut(s) 1132
XmiI GTMKAC 1 cut(s) 1480
XspI CTAG 1 cut(s) 98
Zsp2I ATGCAT 1 cut(s) 1573
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.