Rh2CG213800
MYB Family

Myb-like protein X

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Forward (+)
21012805 .. 21018673
5869 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG213800.1

Sequence Viewer

Length: 2304 bp
ATGTTCAAGCTATCTCCTCGCAGGAACCCGAGATCTAAAGGTTTCAAGGTGAAGCATGTACTACAAATATGTCTTTTGGCGGGTGTCTGCATCTGGCTAGTTTACCAAGTCAAGCAGTCTCAAGTCAAGAAATCACAGTTGGCTGCAAGCATAAAAGATGGCAATGGAATTGTAAATTTAGGAAGAAAGGCCCTCAACCCTCTTCGGGAGGAAACTGTTGTTGAAGATGCAAGGCACAAGGAGGAGGAGGAAGAAGAAGAAAACAGGAATGTGGAAGAGCCAAACAAGCCTGTAGAGATCGATAATGTTGGAGGAGGCAGTGGAGAAGACCAGATAAATGAAAATGATCAGCCTAAAGTTGAAGAAACGAGGGATGATCATGTTGATTCAGTAGAAGGAGATAAAGAAACGGAAGTGACAAGAGAGACTATTAATGAGGAGGGCACTGTGAATGAAGATGAACAGATCAAGGATGATGTGGATGGAAACACAAAGAATGAAGATGTCAAAGAGAATGAGACTGAGGAGAGCAATGAAAGGGTAACTGAAGAGGTCAAAGAGAAAGAAAGTGAAGAGGTGAAGGAGACTGAAGTGACCAAAGAAAAAGAAGGTGAAGAGGTGAAGGAGAATGAAGAGACCAAGGAGGAAGGAACATCGGAGGAGAGTCAAGGGGAGGTCAATAAGGAGGAGGGGGAAGAGCACAATGAGACAGATAAAGAAAAGGAGGCAGAAGAGAAGGAAGGTGATAAGATTGAACAGGTGATTTTAGCTGATGACCGGCTTCAAGATGGAGGTGAAAAACATAATGAGGAGGCAAGAGAAGAGCATTACAAGGCTGATGATGCTTCCAGTGCTGTGGCTCATGAAACTCAAAATGTATCAGCCAATAATGAACAAGGTGGTTCAGAAAACACTAATGAATCAGAGCAGTCAGTTGACAAAGAAAAGCAGGAGTTTGAGCGGGAGAACAATGCAAATAGCACTGTAGTGGATACAGACCAAAACAAGTCGGTCTCAAATGGGGAAGCAGTGGAAAGCGGTGAAAAGAATGATACTAATAATGCTACCGTAACCAAAGTGGTTTCTGAGGGTAATCCTTCTGAAACAGAGAATGGTTCTAAATCCAGTTCAACACTGGCCACAGAATCATTAGAGCAGCAGCAAGTGGACACCAAAAAAGATGAGTCTGCTCAGCAAACTGTTGTCACAGAGTACACTGAGAGATCTGATGTAGCTGCTAACAGTGGGCAACAAGACTCCACAACTGAGAAGGGAGATACAACTAATGGAGAATCCAAAAAAGATGACTCCGCTCAGCAAAATGTTGTCACAGAGCAAACCGAGAGATCTGATGTAGCTGCTAACAGTGAGCAACAAGACTCTGGCACAACAGCTTCCACCACAACTCAGAAGGGAGATACAACTAATGGAGAATCCACAGATACTTCTACTAATTCTGAATCAGTTGTGACAGATAATCAGATTGTCAACTCCAATACATCTACAGAAAAAGAGAGTGGTTCTGCATCTTCAGACATGAACATTGTTCAAAAGACAAATAGTGACACTGTGGAAGAAGGAACACAAGAAAGTATACTTACGCAGAAAACAAATGACAATGTAGATAATGGTGCAGGGCAACAAGTTGATTCTTCTAATTCTACAGAACAGCAAGAGAAAGATGCATCCTCAAGCACAGATAACAAATCTGATGCAGGCCAGAATGAAAATGACAGTGCTGTTCAGAACAACACAAACGACAATGCAAATAGCAATGGCAATACGGATGCAAACCATGGAGAATCAGGTGACTCTTCCAATTCTTCTGTATCACAAGAGAAAGAGGCATCTCAAAACACAGATAGTAATGCTGATTCAGAACAGAAAGAGAATGAGAATGTTGTTCAAAGCAATACTGATGACAATGCAGATGCGGGCCAAAAGGAATCAGTTAATACTTCAGTATTCTCAGACACCAATGCTGAGACGGGGGATAGTCAAAAGGAGAATGTCGCTCAGAGCAATGCAAATGAGAATGTGGTCCAGAGCAACACAAATGAGAATGTCGTTCAGAGCAACACAAATGAGAATGTCGTTCAGAGCAACGCAAATGAGAATGTGGTCCAGAGCAACACAAATGAGAATGTCGTTCAGAGCAATGAAGCTTCAACAAGCACAAATGACAACACTGAGGCACAGAATGTCAATGTTGATTCTTCAAATTCTTCGATCCCTGAAGAAGAGAAAAAGGCTCGTATAGACCTGGACACTTTGCCAGAAAGCAAAGTTGATGCTGCAGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

767

Amino Acids

83.45

Weight (kDa)

4.18

Isoelectric Point (pI)

44.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 2 cut(s) 961, 1313
AccI GTMKAC 1 cut(s) 1594
AciI CCGC 5 cut(s) 80, 961, 1038, 1311, 1934
AclWI GGATC 1 cut(s) 2224
AcoI YGGCCR 1 cut(s) 1137
AcsI RAATTY 2 cut(s) 175, 2221
AcuI CTGAAG 5 cut(s) 567, 609, 1515, 1944, 2256
AfaI GTAC 2 cut(s) 60, 1214
AfiI CCNNNNNNNGG 1 cut(s) 205
AjnI CCWGG 1 cut(s) 2262
AjuI GAANNNNNNNTTGG 2 cut(s) 122, 154
AleI CACNNNNGTG 1 cut(s) 986
AluBI AGCT 6 cut(s) 10, 770, 1235, 1358, 1394, 2165
AluI AGCT 6 cut(s) 10, 770, 1235, 1358, 1394, 2165
Alw21I GWGCWC 1 cut(s) 702
Alw26I GTCTC 8 cut(s) 123, 419, 512, 578, 629, 701, 1018, 1979
AlwI GGATC 1 cut(s) 2224
Ama87I CYCGRG 1 cut(s) 28
AoxI GGCC 4 cut(s) 189, 1137, 1717, 1936
ApeKI GCWGC 6 cut(s) 143, 1156, 1159, 1235, 1358, 2294
ApoI RAATTY 2 cut(s) 175, 2221
AseI ATTAAT 1 cut(s) 432
AspS9I GGNCC 4 cut(s) 190, 1936, 2041, 2122
AsuHPI GGTGA 9 cut(s) 61, 589, 623, 631, 755, 772, 806, 1052, 1820
AvaI CYCGRG 1 cut(s) 28
AvaII GGWCC 2 cut(s) 2041, 2122
BaeGI GKGCMC 1 cut(s) 446
BalI TGGCCA 1 cut(s) 1139
BbsI GAAGAC 1 cut(s) 333
Bbv12I GWGCWC 1 cut(s) 702
BbvI GCAGC 6 cut(s) 130, 1168, 1171, 1222, 1345, 2281
BccI CCATC 3 cut(s) 152, 476, 782
BciT130I CCWGG 1 cut(s) 2264
BciVI GTATCC 1 cut(s) 985
BclI TGATCA 2 cut(s) 346, 376
BcoDI GTCTC 8 cut(s) 123, 419, 512, 578, 629, 701, 1018, 1979
BfaI CTAG 1 cut(s) 98
BfmI CTRYAG 5 cut(s) 291, 984, 1503, 1662, 2295
BfuI GTATCC 1 cut(s) 985
BglII AGATCT 3 cut(s) 32, 1223, 1346
BisI GCNGC 6 cut(s) 144, 1157, 1160, 1236, 1359, 2295
BlpI GCTNAGC 2 cut(s) 1191, 1314
BlsI GCNGC 6 cut(s) 145, 1158, 1161, 1237, 1360, 2296
Bme1390I CCNGG 1 cut(s) 2264
Bme18I GGWCC 2 cut(s) 2041, 2122
BmeT110I CYCGRG 1 cut(s) 28
BmgT120I GGNCC 4 cut(s) 190, 1936, 2041, 2122
BmiI GGNNCC 1 cut(s) 26
BmrFI CCNGG 1 cut(s) 2264
BpiI GAAGAC 1 cut(s) 333
Bpu1102I GCTNAGC 2 cut(s) 1191, 1314
BpuEI CTTGAG 2 cut(s) 105, 1675
Bsa29I ATCGAT 1 cut(s) 300
BsaI GGTCTC 2 cut(s) 629, 1018
BsaJI CCNNGG 2 cut(s) 639, 1795
Bsc4I CCNNNNNNNGG 1 cut(s) 205
Bse118I RCCGGY 1 cut(s) 777
Bse1I ACTGG 3 cut(s) 849, 1125, 1140
Bse3DI GCAATG 5 cut(s) 169, 538, 1780, 2029, 2164
BseBI CCWGG 1 cut(s) 2264
BseCI ATCGAT 1 cut(s) 300
BseDI CCNNGG 2 cut(s) 639, 1795
BseGI GGATG 5 cut(s) 379, 478, 487, 1685, 1792
BseLI CCNNNNNNNGG 1 cut(s) 205
BseMI GCAATG 5 cut(s) 169, 538, 1780, 2029, 2164
BseNI ACTGG 3 cut(s) 849, 1125, 1140
BseRI GAGGAG 9 cut(s) 6, 257, 260, 327, 452, 539, 674, 701, 824
BseSI GKGCMC 1 cut(s) 446
BseXI GCAGC 6 cut(s) 130, 1168, 1171, 1222, 1345, 2281
BsgI GTGCAG 1 cut(s) 1653
BshFI GGCC 4 cut(s) 191, 1139, 1719, 1938
BshVI ATCGAT 1 cut(s) 300
BsiHKAI GWGCWC 1 cut(s) 702
BsiHKCI CYCGRG 1 cut(s) 28
BsiSI CCGG 1 cut(s) 778
BslI CCNNNNNNNGG 1 cut(s) 205
BsmAI GTCTC 8 cut(s) 123, 419, 512, 578, 629, 701, 1018, 1979
BsmBI CGTCTC 1 cut(s) 1979
BsnI GGCC 4 cut(s) 191, 1139, 1719, 1938
Bso31I GGTCTC 2 cut(s) 629, 1018
BsoBI CYCGRG 1 cut(s) 28
Bsp1286I GDGCHC 2 cut(s) 446, 702
Bsp143I GATC 8 cut(s) 32, 297, 346, 376, 465, 1223, 1346, 2229
Bsp1720I GCTNAGC 2 cut(s) 1191, 1314
Bsp19I CCATGG 1 cut(s) 1795
BspACI CCGC 5 cut(s) 80, 961, 1038, 1311, 1934
BspANI GGCC 4 cut(s) 191, 1139, 1719, 1938
BspDI ATCGAT 1 cut(s) 300
BspHI TCATGA 1 cut(s) 862
BspLI GGNNCC 1 cut(s) 26
BspMAI CTGCAG 1 cut(s) 2299
BspPI GGATC 1 cut(s) 2224
BspQI GCTCTTC 3 cut(s) 270, 690, 816
BspTNI GGTCTC 2 cut(s) 629, 1018
BsrBI CCGCTC 2 cut(s) 961, 1313
BsrDI GCAATG 5 cut(s) 169, 538, 1780, 2029, 2164
BsrFI RCCGGY 1 cut(s) 777
BsrI ACTGG 3 cut(s) 849, 1125, 1140
BssAI RCCGGY 1 cut(s) 777
BssECI CCNNGG 2 cut(s) 639, 1795
BssMI GATC 8 cut(s) 32, 297, 346, 376, 465, 1223, 1346, 2229
BssNAI GTATAC 1 cut(s) 1595
BssT1I CCWWGG 2 cut(s) 639, 1795
Bst1107I GTATAC 1 cut(s) 1595
Bst2UI CCWGG 1 cut(s) 2264
BstC8I GCNNGC 3 cut(s) 148, 1717, 1936
BstDSI CCRYGG 1 cut(s) 1795
BstF5I GGATG 5 cut(s) 379, 478, 487, 1685, 1792
BstKTI GATC 8 cut(s) 35, 300, 349, 379, 468, 1226, 1349, 2232
BstMAI GTCTC 8 cut(s) 123, 419, 512, 578, 629, 701, 1018, 1979
BstMBI GATC 8 cut(s) 32, 297, 346, 376, 465, 1223, 1346, 2229
BstMWI GCNNNNNNNGC 3 cut(s) 286, 842, 851
BstNI CCWGG 1 cut(s) 2264
BstNSI RCATGY 1 cut(s) 59
BstSCI CCNGG 1 cut(s) 2262
BstSFI CTRYAG 5 cut(s) 291, 984, 1503, 1662, 2295
BstSLI GKGCMC 1 cut(s) 446
BstV1I GCAGC 6 cut(s) 130, 1168, 1171, 1222, 1345, 2281
BstV2I GAAGAC 1 cut(s) 333
BstX2I RGATCY 3 cut(s) 32, 1223, 1346
BstXI CCANNNNNNTGG 1 cut(s) 856
BstYI RGATCY 3 cut(s) 32, 1223, 1346
BstZ17I GTATAC 1 cut(s) 1595
Bsu15I ATCGAT 1 cut(s) 300
BsuI GTATCC 1 cut(s) 985
BsuRI GGCC 4 cut(s) 191, 1139, 1719, 1938
BsuTUI ATCGAT 1 cut(s) 300
BtgI CCRYGG 1 cut(s) 1795
BtsCI GGATG 5 cut(s) 379, 478, 487, 1685, 1792
BtsI GCAGTG 3 cut(s) 325, 1035, 2304
Cac8I GCNNGC 3 cut(s) 148, 1717, 1936
CciI TCATGA 1 cut(s) 862
Cfr10I RCCGGY 1 cut(s) 777
Cfr13I GGNCC 4 cut(s) 190, 1936, 2041, 2122
ClaI ATCGAT 1 cut(s) 300
Csp6I GTAC 2 cut(s) 59, 1213
CviAII CATG 5 cut(s) 56, 380, 863, 1537, 1796
CviQI GTAC 2 cut(s) 59, 1213
DpnI GATC 8 cut(s) 34, 299, 348, 378, 467, 1225, 1348, 2231
DpnII GATC 8 cut(s) 32, 297, 346, 376, 465, 1223, 1346, 2229
EaeI YGGCCR 1 cut(s) 1137
Eco130I CCWWGG 2 cut(s) 639, 1795
Eco31I GGTCTC 2 cut(s) 629, 1018
Eco47I GGWCC 2 cut(s) 2041, 2122
Eco57I CTGAAG 5 cut(s) 567, 609, 1515, 1944, 2256
Eco88I CYCGRG 1 cut(s) 28
EcoO109I RGGNCCY 1 cut(s) 190
EcoRII CCWGG 1 cut(s) 2262
EcoT14I CCWWGG 2 cut(s) 639, 1795
EcoT22I ATGCAT 1 cut(s) 1687
ErhI CCWWGG 2 cut(s) 639, 1795
Esp3I CGTCTC 1 cut(s) 1979
FaeI CATG 5 cut(s) 59, 383, 866, 1540, 1799
FatI CATG 5 cut(s) 55, 379, 862, 1536, 1795
FauI CCCGC 3 cut(s) 73, 954, 1927
FbaI TGATCA 2 cut(s) 346, 376
FblI GTMKAC 1 cut(s) 1594
Fnu4HI GCNGC 6 cut(s) 144, 1157, 1160, 1236, 1359, 2295
FokI GGATG 5 cut(s) 386, 485, 494, 1672, 1799
Fsp4HI GCNGC 6 cut(s) 144, 1157, 1160, 1236, 1359, 2295
FspBI CTAG 1 cut(s) 98
GluI GCNGC 6 cut(s) 144, 1157, 1160, 1236, 1359, 2295
HaeIII GGCC 4 cut(s) 191, 1139, 1719, 1938
HapII CCGG 1 cut(s) 778
Hin1II CATG 5 cut(s) 59, 383, 866, 1540, 1799
HincII GTYRAC 2 cut(s) 937, 1489
HindII GTYRAC 2 cut(s) 937, 1489
HindIII AAGCTT 1 cut(s) 2163
HpaII CCGG 1 cut(s) 778
HphI GGTGA 9 cut(s) 61, 589, 623, 631, 755, 772, 806, 1052, 1820
Hpy166II GTNNAC 6 cut(s) 103, 937, 1168, 1215, 1489, 1595
Hpy188III TCNNGA 6 cut(s) 127, 206, 785, 863, 2044, 2125
Hpy8I GTNNAC 6 cut(s) 103, 937, 1168, 1215, 1489, 1595
HpyF10VI GCNNNNNNNGC 3 cut(s) 286, 842, 851
Hsp92II CATG 5 cut(s) 59, 383, 866, 1540, 1799
Ksp22I TGATCA 2 cut(s) 346, 376
Kzo9I GATC 8 cut(s) 32, 297, 346, 376, 465, 1223, 1346, 2229
LguI GCTCTTC 3 cut(s) 270, 690, 816
Lsp1109I GCAGC 6 cut(s) 130, 1168, 1171, 1222, 1345, 2281
MaeI CTAG 1 cut(s) 98
MaeIII GTNAC 9 cut(s) 415, 541, 592, 1069, 1204, 1327, 1468, 1562, 1808
MalI GATC 8 cut(s) 34, 299, 348, 378, 467, 1225, 1348, 2231
MbiI CCGCTC 2 cut(s) 961, 1313
MboI GATC 8 cut(s) 32, 297, 346, 376, 465, 1223, 1346, 2229
MflI RGATCY 3 cut(s) 32, 1223, 1346
MhlI GDGCHC 2 cut(s) 446, 702
MlsI TGGCCA 1 cut(s) 1139
MluCI AATT 6 cut(s) 168, 175, 1453, 1657, 1819, 2221
MluNI TGGCCA 1 cut(s) 1139
MlyI GAGTC 6 cut(s) 673, 1193, 1250, 1301, 1373, 1805
MmeI TCCRAC 1 cut(s) 289
Mox20I TGGCCA 1 cut(s) 1139
Mph1103I ATGCAT 1 cut(s) 1687
MscI TGGCCA 1 cut(s) 1139
MseI TTAA 2 cut(s) 432, 1953
MslI CAYNNNNRTG 1 cut(s) 986
Msp20I TGGCCA 1 cut(s) 1139
MspI CCGG 1 cut(s) 778
MspR9I CCNGG 1 cut(s) 2264
MvaI CCWGG 1 cut(s) 2264
MwoI GCNNNNNNNGC 3 cut(s) 286, 842, 851
NcoI CCATGG 1 cut(s) 1795
NdeII GATC 8 cut(s) 32, 297, 346, 376, 465, 1223, 1346, 2229
NlaIII CATG 5 cut(s) 59, 383, 866, 1540, 1799
NlaIV GGNNCC 1 cut(s) 26
NmuCI GTSAC 7 cut(s) 415, 592, 1204, 1327, 1468, 1562, 1808
NsiI ATGCAT 1 cut(s) 1687
NspI RCATGY 1 cut(s) 59
OliI CACNNNNGTG 1 cut(s) 986
PagI TCATGA 1 cut(s) 862
PciSI GCTCTTC 3 cut(s) 270, 690, 816
PkrI GCNGC 6 cut(s) 145, 1158, 1161, 1237, 1360, 2296
PleI GAGTC 6 cut(s) 672, 1192, 1250, 1301, 1373, 1805
PpsI GAGTC 6 cut(s) 672, 1192, 1250, 1301, 1373, 1805
PshBI ATTAAT 1 cut(s) 432
Psp6I CCWGG 1 cut(s) 2262
PspGI CCWGG 1 cut(s) 2262
PspN4I GGNNCC 1 cut(s) 26
PspPI GGNCC 4 cut(s) 190, 1936, 2041, 2122
PstI CTGCAG 1 cut(s) 2299
PsuI RGATCY 3 cut(s) 32, 1223, 1346
RsaI GTAC 2 cut(s) 60, 1214
RsaNI GTAC 2 cut(s) 59, 1213
RseI CAYNNNNRTG 1 cut(s) 986
SapI GCTCTTC 3 cut(s) 270, 690, 816
SaqAI TTAA 2 cut(s) 432, 1953
SatI GCNGC 6 cut(s) 144, 1157, 1160, 1236, 1359, 2295
Sau3AI GATC 8 cut(s) 32, 297, 346, 376, 465, 1223, 1346, 2229
Sau96I GGNCC 4 cut(s) 190, 1936, 2041, 2122
SchI GAGTC 6 cut(s) 673, 1193, 1250, 1301, 1373, 1805
ScrFI CCNGG 1 cut(s) 2264
SduI GDGCHC 2 cut(s) 446, 702
SfcI CTRYAG 5 cut(s) 291, 984, 1503, 1662, 2295
SinI GGWCC 2 cut(s) 2041, 2122
SmiMI CAYNNNNRTG 1 cut(s) 986
SmlI CTYRAG 2 cut(s) 120, 1690
SmoI CTYRAG 2 cut(s) 120, 1690
Sse9I AATT 6 cut(s) 168, 175, 1453, 1657, 1819, 2221
SsiI CCGC 5 cut(s) 80, 961, 1038, 1311, 1934
SspMI CTAG 1 cut(s) 98
StyD4I CCNGG 1 cut(s) 2262
StyI CCWWGG 2 cut(s) 639, 1795
TaqI TCGA 2 cut(s) 300, 2228
TaqII GACCGA 1 cut(s) 1000
TasI AATT 6 cut(s) 168, 175, 1453, 1657, 1819, 2221
TatI WGTACW 2 cut(s) 58, 1212
Tru1I TTAA 2 cut(s) 432, 1953
Tru9I TTAA 2 cut(s) 432, 1953
TseFI GTSAC 7 cut(s) 415, 592, 1204, 1327, 1468, 1562, 1808
TseI GCWGC 6 cut(s) 143, 1156, 1159, 1235, 1358, 2294
Tsp45I GTSAC 7 cut(s) 415, 592, 1204, 1327, 1468, 1562, 1808
TspGWI ACGGA 2 cut(s) 425, 1799
VpaK11BI GGWCC 2 cut(s) 2041, 2122
VspI ATTAAT 1 cut(s) 432
XapI RAATTY 2 cut(s) 175, 2221
XceI RCATGY 1 cut(s) 59
XcmI CCANNNNNNNNNTGG 1 cut(s) 1132
XmiI GTMKAC 1 cut(s) 1594
XspI CTAG 1 cut(s) 98
Zsp2I ATGCAT 1 cut(s) 1687
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.