Rmu_sc0000332.1_g000012
MYB Family

Myb-like protein X

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000332.1
Physical Location & Seq
Forward (+)
45320 .. 47659
2340 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000332.1_g000012.1.cds

Sequence Viewer

Length: 2340 bp
atgttcaagctatctcctcgcaggaacccgagatctaaaggtttcaaggtgaagcatgtactacaaatatgtcttttggtgggtgtctgcatctggctagtttaccaagtcaagcagtctcaagtcaagaaatcacagttggctgcaagcataaaagatggcaatggaattgtaaatttaggaagaaaggccctcaaccctcttcgggaggaaactgttgttgaagatgcaaggcacaaggaggaggaggaagacgaagaaaacaggaatgtggaagagccaaacaagcctgtagagatcgataatgttggaggaggcagtggagaagaccagataaatgaaaatgatcagcctaaagttgaagaaacgagggatgatcatgttgattcagtagaaggagataaagaaacggaagtgacaagagagactattaatgaggagggcactgtgaatgaagatgaacagatcaaggatgatgtggatggaaacacgaagaatgaagatgtcaaagagaatgagactgaggagagcaatgaaagggtaactgaagaggtcaaagagaaagaaagtgaagaggtgaaggagactgaagtgaccaaagaaaaagaaggtcaagaggtgaaggagaatgaagagaccaaggaggaaggaacatcggaggagagtcaaggggaggtcaataaggaggagggggaagagcacaatgagacagataaagaaaaggaggcagaagagaaggaaggtgataagattgaacaggtgattttagctgatgaccggcttcaagatggaggtgaaaaacataatgaggaggcaagagaagagcattacaaggctgatgatgcttccagtgctgtggctcatgaaactcaaaatgtatcagccaataatgaacaaggtggttcagaaaacactaatgaatcagagcagtcagttgacaaagaaaagcaggagtttcagcgggagaacaatgcaaatagcactgtagtggataaagaccaaaacaagtcggtctcaaacagggaagcagtggaaagcggtgaaaagaatgatactgataatgctaccgtaaccgaagtggtttctgagggtaatccttctgaaacagagaatggttctaaatccagttcaacactggccacagaatcattagagcagcagcaagtggacaccaaaaaagatgagtctgctcagcaaactgttgtcacagagcacactgagagatctgatgtagctgctaacggtgggcaacaagactctggcacaacagcttccaccacaactgagaagggagatacaactaatggagaatccaaaaaagatgactccgctcagcaaaatgttgtcacagagcaaactgagagatctgatgtagctgctaacagtgagcaacaagactctggcacaacagcttccaccacaactcagaagggagatacaactaatggagaatccacagatacttctactaattctgaatcagttgtgacagataatcagattgtcaactccaatacatctacagaaaaagagagtggttctgcaccttcagacatgaacattgttcaaaagacaaatagtgacactgtagaagaaggaacacaagaaagtatacttacgcagaaaacaaatgacaacgtagataatggtgcagggaaacaagttgattcttctaattctacagaacagcaagagaaagatgcatcctcaagcacagataacaaatctgatgcaggccagaatgaaaatgacagtggtgttcagaacaacacaaacgacaatgcaaatggcaatggcaatgcggatgcacaccatggagaatcaggtgactcttccaattcttctgtatcacaagagaaagaggcatctcaaaacacagatagtaatgctgattcagaacagaaagagaatgagaatgttgttcaaagcaatactgatgacaatgcagatgggggccaaaaggaatcagttaatacttcagtattctcagacaccaatgctgagacgggggataatcaaaaggagaatgttgctcagagcaatgcaaatgagaatgtggtccagagcaacacaaatgagaatgtcgttcagagcaacgcgaatgagaatgtcgttcagagcaacgcaaaagagaatgaaggtgcaggcggagaagaatctggcaatgctcagaaggagaatgaagcttcaacaagcacaaatgacaacactgaggcacagaatgtcaatgttgattcttcaaattcttcgatccctgaagaagagaaaaaggctcgtatagacctggacactttgccagaaagcaaagttgaagttcacaacaatgatgctgcagagtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

779

Amino Acids

84.58

Weight (kDa)

4.24

Isoelectric Point (pI)

44.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 1331
AccI GTMKAC 1 cut(s) 1612
AccII CGCG 1 cut(s) 2099
AciI CCGC 5 cut(s) 961, 1038, 1329, 1802, 2148
AclWI GGATC 1 cut(s) 2245
AcoI YGGCCR 1 cut(s) 1137
AcsI RAATTY 2 cut(s) 175, 2242
AcuI CTGAAG 5 cut(s) 567, 609, 1533, 1962, 2277
AfaI GTAC 1 cut(s) 60
AfiI CCNNNNNNNGG 1 cut(s) 205
AjnI CCWGG 1 cut(s) 2283
AjuI GAANNNNNNNTTGG 2 cut(s) 122, 154
AleI CACNNNNGTG 1 cut(s) 986
AluBI AGCT 7 cut(s) 10, 770, 1235, 1271, 1376, 1412, 2186
AluI AGCT 7 cut(s) 10, 770, 1235, 1271, 1376, 1412, 2186
Alw21I GWGCWC 2 cut(s) 702, 1215
Alw26I GTCTC 8 cut(s) 123, 419, 512, 578, 629, 701, 1018, 1997
AlwI GGATC 1 cut(s) 2245
Ama87I CYCGRG 1 cut(s) 28
AoxI GGCC 4 cut(s) 189, 1137, 1735, 1954
ApeKI GCWGC 6 cut(s) 143, 1156, 1159, 1235, 1376, 2330
ApoI RAATTY 2 cut(s) 175, 2242
AseI ATTAAT 1 cut(s) 432
AspS9I GGNCC 3 cut(s) 190, 1954, 2059
AsuHPI GGTGA 8 cut(s) 61, 589, 631, 755, 772, 806, 1052, 1838
AvaI CYCGRG 1 cut(s) 28
AvaII GGWCC 1 cut(s) 2059
BaeGI GKGCMC 1 cut(s) 446
BalI TGGCCA 1 cut(s) 1139
BbsI GAAGAC 2 cut(s) 258, 333
Bbv12I GWGCWC 2 cut(s) 702, 1215
BbvI GCAGC 6 cut(s) 130, 1168, 1171, 1222, 1363, 2317
BccI CCATC 4 cut(s) 152, 476, 782, 1943
BciT130I CCWGG 1 cut(s) 2285
BclI TGATCA 2 cut(s) 346, 376
BcoDI GTCTC 8 cut(s) 123, 419, 512, 578, 629, 701, 1018, 1997
BfaI CTAG 1 cut(s) 98
BfmI CTRYAG 6 cut(s) 291, 984, 1521, 1587, 1680, 2331
BglII AGATCT 3 cut(s) 32, 1223, 1364
BisI GCNGC 6 cut(s) 144, 1157, 1160, 1236, 1377, 2331
BlpI GCTNAGC 2 cut(s) 1191, 1332
BlsI GCNGC 6 cut(s) 145, 1158, 1161, 1237, 1378, 2332
Bme1390I CCNGG 1 cut(s) 2285
Bme18I GGWCC 1 cut(s) 2059
BmeT110I CYCGRG 1 cut(s) 28
BmgT120I GGNCC 3 cut(s) 190, 1954, 2059
BmiI GGNNCC 2 cut(s) 26, 1955
BmrFI CCNGG 1 cut(s) 2285
BmsI GCATC 9 cut(s) 99, 217, 832, 1690, 1712, 1720, 1795, 1874, 2317
BpiI GAAGAC 2 cut(s) 258, 333
Bpu1102I GCTNAGC 2 cut(s) 1191, 1332
BpuEI CTTGAG 2 cut(s) 105, 1693
Bsa29I ATCGAT 1 cut(s) 300
BsaI GGTCTC 2 cut(s) 629, 1018
BsaJI CCNNGG 2 cut(s) 639, 1813
Bsc4I CCNNNNNNNGG 1 cut(s) 205
Bse118I RCCGGY 1 cut(s) 777
Bse1I ACTGG 3 cut(s) 849, 1125, 1140
Bse3DI GCAATG 6 cut(s) 169, 538, 1798, 1804, 2047, 2170
BseBI CCWGG 1 cut(s) 2285
BseCI ATCGAT 1 cut(s) 300
BseDI CCNNGG 2 cut(s) 639, 1813
BseGI GGATG 5 cut(s) 379, 478, 487, 1703, 1810
BseLI CCNNNNNNNGG 1 cut(s) 205
BseMI GCAATG 6 cut(s) 169, 538, 1798, 1804, 2047, 2170
BseNI ACTGG 3 cut(s) 849, 1125, 1140
BseRI GAGGAG 9 cut(s) 6, 257, 260, 327, 452, 539, 674, 701, 824
BseSI GKGCMC 1 cut(s) 446
BseXI GCAGC 6 cut(s) 130, 1168, 1171, 1222, 1363, 2317
BsgI GTGCAG 3 cut(s) 1527, 1671, 2163
Bsh1236I CGCG 1 cut(s) 2099
BshFI GGCC 4 cut(s) 191, 1139, 1737, 1956
BshVI ATCGAT 1 cut(s) 300
BsiHKAI GWGCWC 2 cut(s) 702, 1215
BsiHKCI CYCGRG 1 cut(s) 28
BsiSI CCGG 1 cut(s) 778
BslI CCNNNNNNNGG 1 cut(s) 205
BsmAI GTCTC 8 cut(s) 123, 419, 512, 578, 629, 701, 1018, 1997
BsmBI CGTCTC 1 cut(s) 1997
BsnI GGCC 4 cut(s) 191, 1139, 1737, 1956
Bso31I GGTCTC 2 cut(s) 629, 1018
BsoBI CYCGRG 1 cut(s) 28
Bsp1286I GDGCHC 3 cut(s) 446, 702, 1215
Bsp143I GATC 8 cut(s) 32, 297, 346, 376, 465, 1223, 1364, 2250
Bsp1720I GCTNAGC 2 cut(s) 1191, 1332
Bsp19I CCATGG 1 cut(s) 1813
BspACI CCGC 5 cut(s) 961, 1038, 1329, 1802, 2148
BspANI GGCC 4 cut(s) 191, 1139, 1737, 1956
BspDI ATCGAT 1 cut(s) 300
BspFNI CGCG 1 cut(s) 2099
BspHI TCATGA 1 cut(s) 862
BspLI GGNNCC 2 cut(s) 26, 1955
BspMAI CTGCAG 1 cut(s) 2335
BspPI GGATC 1 cut(s) 2245
BspQI GCTCTTC 3 cut(s) 270, 690, 816
BspTNI GGTCTC 2 cut(s) 629, 1018
BsrBI CCGCTC 1 cut(s) 1331
BsrDI GCAATG 6 cut(s) 169, 538, 1798, 1804, 2047, 2170
BsrFI RCCGGY 1 cut(s) 777
BsrI ACTGG 3 cut(s) 849, 1125, 1140
BssAI RCCGGY 1 cut(s) 777
BssECI CCNNGG 2 cut(s) 639, 1813
BssMI GATC 8 cut(s) 32, 297, 346, 376, 465, 1223, 1364, 2250
BssNAI GTATAC 1 cut(s) 1613
BssT1I CCWWGG 2 cut(s) 639, 1813
Bst1107I GTATAC 1 cut(s) 1613
Bst2UI CCWGG 1 cut(s) 2285
BstC8I GCNNGC 3 cut(s) 148, 1735, 2146
BstDSI CCRYGG 1 cut(s) 1813
BstF5I GGATG 5 cut(s) 379, 478, 487, 1703, 1810
BstFNI CGCG 1 cut(s) 2099
BstKTI GATC 8 cut(s) 35, 300, 349, 379, 468, 1226, 1367, 2253
BstMAI GTCTC 8 cut(s) 123, 419, 512, 578, 629, 701, 1018, 1997
BstMBI GATC 8 cut(s) 32, 297, 346, 376, 465, 1223, 1364, 2250
BstMWI GCNNNNNNNGC 3 cut(s) 286, 842, 851
BstNI CCWGG 1 cut(s) 2285
BstNSI RCATGY 1 cut(s) 59
BstSCI CCNGG 1 cut(s) 2283
BstSFI CTRYAG 6 cut(s) 291, 984, 1521, 1587, 1680, 2331
BstSLI GKGCMC 1 cut(s) 446
BstUI CGCG 1 cut(s) 2099
BstV1I GCAGC 6 cut(s) 130, 1168, 1171, 1222, 1363, 2317
BstV2I GAAGAC 2 cut(s) 258, 333
BstX2I RGATCY 3 cut(s) 32, 1223, 1364
BstXI CCANNNNNNTGG 1 cut(s) 856
BstYI RGATCY 3 cut(s) 32, 1223, 1364
BstZ17I GTATAC 1 cut(s) 1613
Bsu15I ATCGAT 1 cut(s) 300
BsuRI GGCC 4 cut(s) 191, 1139, 1737, 1956
BsuTUI ATCGAT 1 cut(s) 300
BtgI CCRYGG 1 cut(s) 1813
BtsCI GGATG 5 cut(s) 379, 478, 487, 1703, 1810
BtsI GCAGTG 2 cut(s) 325, 1035
Cac8I GCNNGC 3 cut(s) 148, 1735, 2146
CciI TCATGA 1 cut(s) 862
Cfr10I RCCGGY 1 cut(s) 777
Cfr13I GGNCC 3 cut(s) 190, 1954, 2059
ClaI ATCGAT 1 cut(s) 300
Csp6I GTAC 1 cut(s) 59
CviAII CATG 5 cut(s) 56, 380, 863, 1555, 1814
CviQI GTAC 1 cut(s) 59
DpnI GATC 8 cut(s) 34, 299, 348, 378, 467, 1225, 1366, 2252
DpnII GATC 8 cut(s) 32, 297, 346, 376, 465, 1223, 1364, 2250
EaeI YGGCCR 1 cut(s) 1137
EciI GGCGGA 1 cut(s) 2163
Eco130I CCWWGG 2 cut(s) 639, 1813
Eco31I GGTCTC 2 cut(s) 629, 1018
Eco47I GGWCC 1 cut(s) 2059
Eco57I CTGAAG 5 cut(s) 567, 609, 1533, 1962, 2277
Eco88I CYCGRG 1 cut(s) 28
EcoO109I RGGNCCY 1 cut(s) 190
EcoRII CCWGG 1 cut(s) 2283
EcoT14I CCWWGG 2 cut(s) 639, 1813
EcoT22I ATGCAT 1 cut(s) 1705
ErhI CCWWGG 2 cut(s) 639, 1813
Esp3I CGTCTC 1 cut(s) 1997
FaeI CATG 5 cut(s) 59, 383, 866, 1558, 1817
FatI CATG 5 cut(s) 55, 379, 862, 1554, 1813
FauI CCCGC 1 cut(s) 954
FbaI TGATCA 2 cut(s) 346, 376
FblI GTMKAC 1 cut(s) 1612
Fnu4HI GCNGC 6 cut(s) 144, 1157, 1160, 1236, 1377, 2331
FokI GGATG 5 cut(s) 386, 485, 494, 1690, 1817
Fsp4HI GCNGC 6 cut(s) 144, 1157, 1160, 1236, 1377, 2331
FspBI CTAG 1 cut(s) 98
GluI GCNGC 6 cut(s) 144, 1157, 1160, 1236, 1377, 2331
HaeIII GGCC 4 cut(s) 191, 1139, 1737, 1956
HapII CCGG 1 cut(s) 778
Hin1II CATG 5 cut(s) 59, 383, 866, 1558, 1817
HincII GTYRAC 2 cut(s) 937, 1507
HindII GTYRAC 2 cut(s) 937, 1507
HindIII AAGCTT 1 cut(s) 2184
HpaII CCGG 1 cut(s) 778
HphI GGTGA 8 cut(s) 61, 589, 631, 755, 772, 806, 1052, 1838
Hpy166II GTNNAC 6 cut(s) 103, 937, 1168, 1507, 1613, 2317
Hpy188III TCNNGA 6 cut(s) 127, 206, 614, 785, 863, 2062
Hpy8I GTNNAC 6 cut(s) 103, 937, 1168, 1507, 1613, 2317
HpyCH4IV ACGT 1 cut(s) 1638
HpyF10VI GCNNNNNNNGC 3 cut(s) 286, 842, 851
HpySE526I ACGT 1 cut(s) 1638
Hsp92II CATG 5 cut(s) 59, 383, 866, 1558, 1817
Ksp22I TGATCA 2 cut(s) 346, 376
Kzo9I GATC 8 cut(s) 32, 297, 346, 376, 465, 1223, 1364, 2250
LguI GCTCTTC 3 cut(s) 270, 690, 816
Lsp1109I GCAGC 6 cut(s) 130, 1168, 1171, 1222, 1363, 2317
LweI GCATC 9 cut(s) 99, 217, 832, 1690, 1712, 1720, 1795, 1874, 2317
MaeI CTAG 1 cut(s) 98
MaeII ACGT 1 cut(s) 1638
MaeIII GTNAC 9 cut(s) 415, 541, 592, 1069, 1204, 1345, 1486, 1580, 1826
MalI GATC 8 cut(s) 34, 299, 348, 378, 467, 1225, 1366, 2252
MbiI CCGCTC 1 cut(s) 1331
MboI GATC 8 cut(s) 32, 297, 346, 376, 465, 1223, 1364, 2250
MflI RGATCY 3 cut(s) 32, 1223, 1364
MhlI GDGCHC 3 cut(s) 446, 702, 1215
MlsI TGGCCA 1 cut(s) 1139
MluCI AATT 6 cut(s) 168, 175, 1471, 1675, 1837, 2242
MluNI TGGCCA 1 cut(s) 1139
MlyI GAGTC 6 cut(s) 673, 1193, 1250, 1319, 1391, 1823
MmeI TCCRAC 1 cut(s) 289
Mox20I TGGCCA 1 cut(s) 1139
Mph1103I ATGCAT 1 cut(s) 1705
MscI TGGCCA 1 cut(s) 1139
MseI TTAA 2 cut(s) 432, 1971
MslI CAYNNNNRTG 2 cut(s) 986, 2322
Msp20I TGGCCA 1 cut(s) 1139
MspA1I CMGCKG 1 cut(s) 961
MspI CCGG 1 cut(s) 778
MspR9I CCNGG 1 cut(s) 2285
MvaI CCWGG 1 cut(s) 2285
MvnI CGCG 1 cut(s) 2099
MwoI GCNNNNNNNGC 3 cut(s) 286, 842, 851
NcoI CCATGG 1 cut(s) 1813
NdeII GATC 8 cut(s) 32, 297, 346, 376, 465, 1223, 1364, 2250
NlaIII CATG 5 cut(s) 59, 383, 866, 1558, 1817
NlaIV GGNNCC 2 cut(s) 26, 1955
NmuCI GTSAC 7 cut(s) 415, 592, 1204, 1345, 1486, 1580, 1826
NsiI ATGCAT 1 cut(s) 1705
NspI RCATGY 1 cut(s) 59
OliI CACNNNNGTG 1 cut(s) 986
PagI TCATGA 1 cut(s) 862
PciSI GCTCTTC 3 cut(s) 270, 690, 816
PkrI GCNGC 6 cut(s) 145, 1158, 1161, 1237, 1378, 2332
PleI GAGTC 6 cut(s) 672, 1192, 1250, 1319, 1391, 1823
PpsI GAGTC 6 cut(s) 672, 1192, 1250, 1319, 1391, 1823
PshBI ATTAAT 1 cut(s) 432
Psp6I CCWGG 1 cut(s) 2283
PspGI CCWGG 1 cut(s) 2283
PspN4I GGNNCC 2 cut(s) 26, 1955
PspPI GGNCC 3 cut(s) 190, 1954, 2059
PstI CTGCAG 1 cut(s) 2335
PsuI RGATCY 3 cut(s) 32, 1223, 1364
RsaI GTAC 1 cut(s) 60
RsaNI GTAC 1 cut(s) 59
RseI CAYNNNNRTG 2 cut(s) 986, 2322
SapI GCTCTTC 3 cut(s) 270, 690, 816
SaqAI TTAA 2 cut(s) 432, 1971
SatI GCNGC 6 cut(s) 144, 1157, 1160, 1236, 1377, 2331
Sau3AI GATC 8 cut(s) 32, 297, 346, 376, 465, 1223, 1364, 2250
Sau96I GGNCC 3 cut(s) 190, 1954, 2059
SchI GAGTC 6 cut(s) 673, 1193, 1250, 1319, 1391, 1823
ScrFI CCNGG 1 cut(s) 2285
SduI GDGCHC 3 cut(s) 446, 702, 1215
SfaNI GCATC 9 cut(s) 99, 217, 832, 1690, 1712, 1720, 1795, 1874, 2317
SfcI CTRYAG 6 cut(s) 291, 984, 1521, 1587, 1680, 2331
SinI GGWCC 1 cut(s) 2059
SmiMI CAYNNNNRTG 2 cut(s) 986, 2322
SmlI CTYRAG 2 cut(s) 120, 1708
SmoI CTYRAG 2 cut(s) 120, 1708
Sse9I AATT 6 cut(s) 168, 175, 1471, 1675, 1837, 2242
SsiI CCGC 5 cut(s) 961, 1038, 1329, 1802, 2148
SspMI CTAG 1 cut(s) 98
StyD4I CCNGG 1 cut(s) 2283
StyI CCWWGG 2 cut(s) 639, 1813
TaiI ACGT 1 cut(s) 1641
TaqI TCGA 2 cut(s) 300, 2249
TaqII GACCGA 1 cut(s) 1000
TasI AATT 6 cut(s) 168, 175, 1471, 1675, 1837, 2242
TatI WGTACW 1 cut(s) 58
Tru1I TTAA 2 cut(s) 432, 1971
Tru9I TTAA 2 cut(s) 432, 1971
TseFI GTSAC 7 cut(s) 415, 592, 1204, 1345, 1486, 1580, 1826
TseI GCWGC 6 cut(s) 143, 1156, 1159, 1235, 1376, 2330
Tsp45I GTSAC 7 cut(s) 415, 592, 1204, 1345, 1486, 1580, 1826
TspGWI ACGGA 1 cut(s) 425
VpaK11BI GGWCC 1 cut(s) 2059
VspI ATTAAT 1 cut(s) 432
XapI RAATTY 2 cut(s) 175, 2242
XceI RCATGY 1 cut(s) 59
XcmI CCANNNNNNNNNTGG 1 cut(s) 1132
XmiI GTMKAC 1 cut(s) 1612
XspI CTAG 1 cut(s) 98
Zsp2I ATGCAT 1 cut(s) 1705
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.