Rare lipoprotein A (RlpA)-like double-psi beta-barrel
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G40610 AT5G05290 |
| fragaria_vesca | FvH4_3g40360 FvH4_7g25860 |
| malus_domestica | MD01G1166700.v1.1 MD03G1052400.v1.1 MD07G1233100.v1.1 MD11G1054500.v1.1 |
| prunus_persica | Prupe.2G263600_v2.0.a1 Prupe.2G263600_v2.0.a1 Prupe.6G042000_v2.0.a1 |
| pyrus_communis | pycom01g18000 pycom03g04180 pycom07g21090 pycom11g04450 |
| rosa_chinensis | RchiOBHm_Chr1g0372131 RchiOBHm_Chr5g0072761 |
| rosa_laevigata | RLG00000026920 RLG00000036330 |
| rosa_multiflora | Rmu_co8393983.1_g000001 Rmu_sc0001755.1_g000023 Rmu_sc0003160.1_g000030 |
| rosa_roxburghii | Rroxscaffold_1G00008420 Rroxscaffold_4G00285220 |
| rosa_rugosa | Rorug01G0370000 Rorug05G0419700 |
| rosa_samantha | Rh1AG378400 Rh1BG341700 Rh1CG355100 Rh1DG372800 Rh5AG476900 Rh5BG496800 Rh5CG520700 Rh5DG509200 |
| rosa_wichuraiana | Rw1G033290 Rw5G044260 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 203 |
| AciI | CCGC | 3 cut(s) | 201, 203, 756 |
| AclWI | GGATC | 2 cut(s) | 269, 446 |
| AcoI | YGGCCR | 1 cut(s) | 396 |
| AfaI | GTAC | 3 cut(s) | 65, 164, 428 |
| AflII | CTTAAG | 1 cut(s) | 380 |
| AgsI | TTSAA | 3 cut(s) | 226, 577, 752 |
| AjnI | CCWGG | 1 cut(s) | 292 |
| AleI | CACNNNNGTG | 1 cut(s) | 539 |
| AluBI | AGCT | 5 cut(s) | 128, 259, 347, 434, 708 |
| AluI | AGCT | 5 cut(s) | 128, 259, 347, 434, 708 |
| Alw21I | GWGCWC | 1 cut(s) | 215 |
| Alw26I | GTCTC | 2 cut(s) | 313, 574 |
| AlwI | GGATC | 2 cut(s) | 269, 446 |
| AoxI | GGCC | 4 cut(s) | 103, 246, 396, 564 |
| AspS9I | GGNCC | 2 cut(s) | 246, 564 |
| BauI | CACGAG | 1 cut(s) | 524 |
| Bbv12I | GWGCWC | 1 cut(s) | 215 |
| BccI | CCATC | 2 cut(s) | 308, 683 |
| BceAI | ACGGC | 2 cut(s) | 231, 551 |
| BciT130I | CCWGG | 1 cut(s) | 294 |
| BcoDI | GTCTC | 2 cut(s) | 313, 574 |
| BfmI | CTRYAG | 1 cut(s) | 260 |
| BfrI | CTTAAG | 1 cut(s) | 380 |
| BisI | GCNGC | 1 cut(s) | 204 |
| BlsI | GCNGC | 1 cut(s) | 205 |
| Bme1390I | CCNGG | 1 cut(s) | 294 |
| BmgT120I | GGNCC | 2 cut(s) | 246, 564 |
| BmiI | GGNNCC | 3 cut(s) | 247, 298, 465 |
| BmrFI | CCNGG | 1 cut(s) | 294 |
| BmrI | ACTGGG | 1 cut(s) | 628 |
| BmsI | GCATC | 3 cut(s) | 121, 143, 297 |
| BmuI | ACTGGG | 1 cut(s) | 628 |
| BpmI | CTGGAG | 2 cut(s) | 398, 573 |
| Bpu10I | CCTNAGC | 1 cut(s) | 343 |
| BsaJI | CCNNGG | 3 cut(s) | 181, 201, 292 |
| Bse1I | ACTGG | 1 cut(s) | 623 |
| BseBI | CCWGG | 1 cut(s) | 294 |
| BseDI | CCNNGG | 3 cut(s) | 181, 201, 292 |
| BseGI | GGATG | 3 cut(s) | 134, 277, 288 |
| BseMII | CTCAG | 3 cut(s) | 270, 437, 664 |
| BseNI | ACTGG | 1 cut(s) | 623 |
| BseRI | GAGGAG | 1 cut(s) | 366 |
| BseYI | CCCAGC | 2 cut(s) | 93, 434 |
| Bsh1236I | CGCG | 1 cut(s) | 203 |
| BshFI | GGCC | 4 cut(s) | 105, 248, 398, 566 |
| BsiHKAI | GWGCWC | 1 cut(s) | 215 |
| BsiSI | CCGG | 1 cut(s) | 138 |
| BslFI | GGGAC | 1 cut(s) | 636 |
| BsmAI | GTCTC | 2 cut(s) | 313, 574 |
| BsmBI | CGTCTC | 2 cut(s) | 313, 574 |
| BsmFI | GGGAC | 1 cut(s) | 636 |
| BsmI | GAATGC | 1 cut(s) | 452 |
| BsnI | GGCC | 4 cut(s) | 105, 248, 398, 566 |
| Bsp1286I | GDGCHC | 1 cut(s) | 215 |
| Bsp143I | GATC | 4 cut(s) | 274, 417, 438, 592 |
| BspACI | CCGC | 3 cut(s) | 201, 203, 756 |
| BspANI | GGCC | 4 cut(s) | 105, 248, 398, 566 |
| BspCNI | CTCAG | 3 cut(s) | 271, 436, 663 |
| BspFNI | CGCG | 1 cut(s) | 203 |
| BspHI | TCATGA | 1 cut(s) | 724 |
| BspLI | GGNNCC | 3 cut(s) | 247, 298, 465 |
| BspPI | GGATC | 2 cut(s) | 269, 446 |
| BspTI | CTTAAG | 1 cut(s) | 380 |
| BsrI | ACTGG | 1 cut(s) | 623 |
| BssECI | CCNNGG | 3 cut(s) | 181, 201, 292 |
| BssMI | GATC | 4 cut(s) | 274, 417, 438, 592 |
| BssSI | CACGAG | 1 cut(s) | 524 |
| BssT1I | CCWWGG | 1 cut(s) | 181 |
| Bst2BI | CACGAG | 1 cut(s) | 524 |
| Bst2UI | CCWGG | 1 cut(s) | 294 |
| Bst4CI | ACNGT | 3 cut(s) | 167, 264, 700 |
| BstAFI | CTTAAG | 1 cut(s) | 380 |
| BstC8I | GCNNGC | 2 cut(s) | 250, 405 |
| BstDEI | CTNAG | 4 cut(s) | 279, 343, 423, 650 |
| BstDSI | CCRYGG | 1 cut(s) | 201 |
| BstF5I | GGATG | 3 cut(s) | 134, 277, 288 |
| BstFNI | CGCG | 1 cut(s) | 203 |
| BstKTI | GATC | 4 cut(s) | 277, 420, 441, 595 |
| BstMAI | GTCTC | 2 cut(s) | 313, 574 |
| BstMBI | GATC | 4 cut(s) | 274, 417, 438, 592 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 404 |
| BstNI | CCWGG | 1 cut(s) | 294 |
| BstSCI | CCNGG | 1 cut(s) | 292 |
| BstSFI | CTRYAG | 1 cut(s) | 260 |
| BstUI | CGCG | 1 cut(s) | 203 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 188 |
| BsuRI | GGCC | 4 cut(s) | 105, 248, 398, 566 |
| BtgI | CCRYGG | 1 cut(s) | 201 |
| BtsCI | GGATG | 3 cut(s) | 134, 277, 288 |
| BtsIMutI | CAGTG | 3 cut(s) | 269, 602, 678 |
| Cac8I | GCNNGC | 2 cut(s) | 250, 405 |
| CciI | TCATGA | 1 cut(s) | 724 |
| Cfr13I | GGNCC | 2 cut(s) | 246, 564 |
| Cfr42I | CCGCGG | 1 cut(s) | 204 |
| Csp6I | GTAC | 3 cut(s) | 64, 163, 427 |
| CviAII | CATG | 4 cut(s) | 107, 468, 607, 725 |
| CviQI | GTAC | 3 cut(s) | 64, 163, 427 |
| DdeI | CTNAG | 4 cut(s) | 279, 343, 423, 650 |
| DpnI | GATC | 4 cut(s) | 276, 419, 440, 594 |
| DpnII | GATC | 4 cut(s) | 274, 417, 438, 592 |
| EaeI | YGGCCR | 1 cut(s) | 396 |
| Eco130I | CCWWGG | 1 cut(s) | 181 |
| EcoO109I | RGGNCCY | 1 cut(s) | 246 |
| EcoRII | CCWGG | 1 cut(s) | 292 |
| EcoT14I | CCWWGG | 1 cut(s) | 181 |
| EcoT22I | ATGCAT | 1 cut(s) | 136 |
| ErhI | CCWWGG | 1 cut(s) | 181 |
| Esp3I | CGTCTC | 2 cut(s) | 313, 574 |
| FaeI | CATG | 4 cut(s) | 110, 471, 610, 728 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 628, 660, 652, 684 |
| FaqI | GGGAC | 1 cut(s) | 636 |
| FatI | CATG | 4 cut(s) | 106, 467, 606, 724 |
| Fnu4HI | GCNGC | 1 cut(s) | 204 |
| FokI | GGATG | 3 cut(s) | 121, 275, 284 |
| Fsp4HI | GCNGC | 1 cut(s) | 204 |
| GluI | GCNGC | 1 cut(s) | 204 |
| GsaI | CCCAGC | 2 cut(s) | 97, 438 |
| GsuI | CTGGAG | 2 cut(s) | 398, 573 |
| HaeIII | GGCC | 4 cut(s) | 105, 248, 398, 566 |
| HapII | CCGG | 1 cut(s) | 138 |
| Hin1II | CATG | 4 cut(s) | 110, 471, 610, 728 |
| HinfI | GANTC | 2 cut(s) | 4, 508 |
| HpaII | CCGG | 1 cut(s) | 138 |
| Hpy166II | GTNNAC | 1 cut(s) | 495 |
| Hpy188I | TCNGA | 5 cut(s) | 79, 458, 653, 696, 744 |
| Hpy188III | TCNNGA | 5 cut(s) | 278, 415, 535, 612, 725 |
| Hpy8I | GTNNAC | 1 cut(s) | 495 |
| Hpy99I | CGWCG | 1 cut(s) | 83 |
| HpyAV | CCTTC | 4 cut(s) | 124, 418, 453, 746 |
| HpyCH4III | ACNGT | 3 cut(s) | 167, 264, 700 |
| HpyCH4V | TGCA | 4 cut(s) | 45, 134, 288, 369 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 404 |
| HpyF3I | CTNAG | 4 cut(s) | 279, 343, 423, 650 |
| Hsp92II | CATG | 4 cut(s) | 110, 471, 610, 728 |
| KspI | CCGCGG | 1 cut(s) | 204 |
| Kzo9I | GATC | 4 cut(s) | 274, 417, 438, 592 |
| LmnI | GCTCC | 1 cut(s) | 125 |
| LweI | GCATC | 3 cut(s) | 121, 143, 297 |
| MaeIII | GTNAC | 2 cut(s) | 167, 676 |
| MalI | GATC | 4 cut(s) | 276, 419, 440, 594 |
| MboI | GATC | 4 cut(s) | 274, 417, 438, 592 |
| MhlI | GDGCHC | 1 cut(s) | 215 |
| MluCI | AATT | 2 cut(s) | 628, 761 |
| MmeI | TCCRAC | 2 cut(s) | 102, 674 |
| Mph1103I | ATGCAT | 1 cut(s) | 136 |
| MseI | TTAA | 1 cut(s) | 381 |
| MslI | CAYNNNNRTG | 1 cut(s) | 539 |
| MspA1I | CMGCKG | 1 cut(s) | 203 |
| MspCI | CTTAAG | 1 cut(s) | 380 |
| MspI | CCGG | 1 cut(s) | 138 |
| MspR9I | CCNGG | 1 cut(s) | 294 |
| Mva1269I | GAATGC | 1 cut(s) | 452 |
| MvaI | CCWGG | 1 cut(s) | 294 |
| MvnI | CGCG | 1 cut(s) | 203 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 404 |
| NdeII | GATC | 4 cut(s) | 274, 417, 438, 592 |
| NlaIII | CATG | 4 cut(s) | 110, 471, 610, 728 |
| NlaIV | GGNNCC | 3 cut(s) | 247, 298, 465 |
| NmeAIII | GCCGAG | 2 cut(s) | 290, 424 |
| NmuCI | GTSAC | 1 cut(s) | 676 |
| NsiI | ATGCAT | 1 cut(s) | 136 |
| OliI | CACNNNNGTG | 1 cut(s) | 539 |
| PagI | TCATGA | 1 cut(s) | 724 |
| PctI | GAATGC | 1 cut(s) | 452 |
| PfeI | GAWTC | 2 cut(s) | 4, 508 |
| PkrI | GCNGC | 1 cut(s) | 205 |
| Psp6I | CCWGG | 1 cut(s) | 292 |
| PspFI | CCCAGC | 2 cut(s) | 93, 434 |
| PspGI | CCWGG | 1 cut(s) | 292 |
| PspN4I | GGNNCC | 3 cut(s) | 247, 298, 465 |
| PspPI | GGNCC | 2 cut(s) | 246, 564 |
| RsaI | GTAC | 3 cut(s) | 65, 164, 428 |
| RsaNI | GTAC | 3 cut(s) | 64, 163, 427 |
| RseI | CAYNNNNRTG | 1 cut(s) | 539 |
| SacII | CCGCGG | 1 cut(s) | 204 |
| SaqAI | TTAA | 1 cut(s) | 381 |
| SatI | GCNGC | 1 cut(s) | 204 |
| Sau3AI | GATC | 4 cut(s) | 274, 417, 438, 592 |
| Sau96I | GGNCC | 2 cut(s) | 246, 564 |
| ScrFI | CCNGG | 1 cut(s) | 294 |
| SduI | GDGCHC | 1 cut(s) | 215 |
| SfaNI | GCATC | 3 cut(s) | 121, 143, 297 |
| SfcI | CTRYAG | 1 cut(s) | 260 |
| Sfr303I | CCGCGG | 1 cut(s) | 204 |
| SgrBI | CCGCGG | 1 cut(s) | 204 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 539 |
| SmlI | CTYRAG | 1 cut(s) | 380 |
| SmoI | CTYRAG | 1 cut(s) | 380 |
| Sse9I | AATT | 2 cut(s) | 628, 761 |
| SsiI | CCGC | 3 cut(s) | 201, 203, 756 |
| SspI | AATATT | 1 cut(s) | 17 |
| StyD4I | CCNGG | 1 cut(s) | 292 |
| StyI | CCWWGG | 1 cut(s) | 181 |
| TaaI | ACNGT | 3 cut(s) | 167, 264, 700 |
| TaqI | TCGA | 1 cut(s) | 519 |
| TaqII | GACCGA | 1 cut(s) | 728 |
| TasI | AATT | 2 cut(s) | 628, 761 |
| TatI | WGTACW | 1 cut(s) | 63 |
| TauI | GCSGC | 1 cut(s) | 206 |
| TfiI | GAWTC | 2 cut(s) | 4, 508 |
| Tru1I | TTAA | 1 cut(s) | 381 |
| Tru9I | TTAA | 1 cut(s) | 381 |
| TscAI | CASTG | 3 cut(s) | 269, 602, 685 |
| TseFI | GTSAC | 1 cut(s) | 676 |
| Tsp45I | GTSAC | 1 cut(s) | 676 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspGWI | ACGGA | 1 cut(s) | 102 |
| TspRI | CASTG | 3 cut(s) | 269, 602, 685 |
| Vha464I | CTTAAG | 1 cut(s) | 380 |
| Zsp2I | ATGCAT | 1 cut(s) | 136 |