Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003333

Physical Location & Seq

Genomic Coordinates Reverse (-)

3014894 .. 3018342

Gene Structure 3449 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G09730.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2322 bp

ATGGCGAGCCGAAACAGAGCACTCTTCTCTGTTTCCACTCTTTTCCTCTGTTTCATCGTCTGCATCTCCGAGCAATCGAACAATCAGTCTTCTCCAGTCTTCGCCTGTGACGTCACCGGAAACCCTTCTCTTGCCGGGCTTAGATTCTGCAACGCGGGGTTGAGTATCAAAGCCCGAGTCACCGATCTTGTCGGAAGATTGACGTTGGAGGAGAAAATCGGGTTTTTGACCAGCAAAGCTATCGGCGTTAGCCGCCTTGGGATTCCGTCTTACAAATGGTGGTCGGAGGCACTTCATGGCGTCTCTAACGTCGGAGGTGGTAGTCGGTTCACCGGTCAAGTCCCTGGCGCCACTAGCTTCCCACAAGTTATACTCACGGCCGCTTCTTTCAATGTGTCTTTGTTCCAAGCCATTGGCAAGGTTGTATCGACAGAGGCGAGGGCAATGTACAATGTGGGATCAGCCGGTTTAACGTTTTGGTCACCTAATGTGAACATATTCCGGGACCCGAGATGGGGAAGAGGACAAGAGACTCCCGGTGAGGACCCAACACTCTCAAGCAAATACGCAGTGGCCTACGTTAAAGGTCTTCAGGAGACTGACGGTGGAGATCCTAACCGTCTCAAAGTCGCTGCTTGCTGCAAACACTACACCGCCTATGATATTGACAATTGGAGAAATGTCAATCGTCTCACTTTCAACGCTGTGGTAAACCAACAAGATCTGGCTGATACGTTTCAACCACCGTTCAAGAGCTGTGTGGTTGATGGGCATGTTGCTAGTGTCATGTGTTCTTACAACCAAGTTAACGGTAAACCAACATGTGCCGATCCTGATCTGCTTTCCGGTGTGATCCGCGGACAATGGCAGCTCAACGGATACATTGTTTCGGATTGTGATTCGGTAGATGTGTTGTTCAGAAAACAACACTATGCTAAGACTCCAGAAGAAGCTGTGGCCAAATCTCTATTGGCAGGTTTGGATTTGAATTGTGATCATTTCAATGGTCAACACGCGATGGGAGCGGTCAAGGCGGGTTTGGTAAACGAAACAGCTATTGACAAAGCGATTTCAAACAATTTCGCGACTCTGATGCGTTTAGGGTTCTTCGATGGAGACCCTAAGAAGCAGCTCTACGGTGGTCTTGGTCCTAAGGATGTTTGCACCGCTGATAACCAAGAACTCGCAAGAGATGGCGCAAGACAAGGCATTGTCTTGCTTAAGAACTCTGCTGGTTCGCTTCCGCTCTCACCTTCCGCAATCAAAACATTAGCCGTGATCGGACCAAACGCCAATGCCACAGAAACAATGATCGGAAACTACCACGGTGTACCATGCAAGTACACAACGCCGCTTCAGGGATTGGCAGAAACGGTGTCGTCTACCTATCAACTGGGATGTAACGTGGCTTGCGTAGATGCGGATATAGGCTCAGCCGTGGATCTGGCTGCTTCTGCGGATGCTGTTGTGCTCGTGGTGGGCGCAGACCAATCAATTGAGAGGGAGGGCCATGACCGAGTCGACCTGTATCTTCCTGGAAAGCAGCAAGAGCTTGTGACTCGAGTTGCTATGGCAGCAAGAGGACCGGTGGTGCTAGTTATCATGTCCGGTGGAGGATTTGACATTACATTCGCCAAGAATGATAAAAAGATCACAAGCATAATGTGGGTCGGATACCCTGGTGAAGCCGGTGGTCTCGCCATTGCTGACGTTATCTTCGGACGTCATAATCCGAGTGGAAATTTGCCGATGACGTGGTATCCTCAATCGTACGTGGAAAAAGTTCCGATGTCAAATATGAACATGAGACCCGACAAATCAAAGGGGTATCCGGGTCGGAGTTACAGGTTTTACACCGGAGAAACCGTATACGCCTTCGCAGACGCGCTTACCTACACTAAATTCGACCATCAGCTAATCAAAGCGCCAAGACTCGTCTCTCTCAGTCTCGACGAGAACCACCCTTGCCGATCATCGGAGTGCCAATCTTTGGACGCGATCGGACCTCACTGCGAGAACGCCGTTGAGGGAGGATCGGATTTCGAGGTTCATTTGAATGTAAAGAACACCGGAGACAGAGCGGGAAGCCACACGGTGTTTCTGTTCACGACGTCGCCGCAAGTACACGGATCTCCGATTAAGCAACTACTAGGATTTGAGAAGATTCGTCTGGGAAAGAGTGAAGAAGCGGTGGTTAGGTTTAACGTCAATGTGTGTAAGGATCTGAGTGTGGTTGATGAGACCGGGAAGAGGAAAATCGCGTTAGGTCATCATCTTCTCCATGTAGGAAGCTTGAAACACTCTTTGAACATTAGTGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0002376 GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005576 GO:0005618 GO:0005623 GO:0005975 GO:0005976 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009044 GO:0009056 GO:0009057 GO:0009605 GO:0009607 GO:0009627 GO:0009814 GO:0009987 GO:0010383 GO:0010410 GO:0016052 GO:0016787 GO:0016798 GO:0030312 GO:0031221 GO:0031222 GO:0043170 GO:0043207 GO:0044036 GO:0044237 GO:0044238 GO:0044260 GO:0044464 GO:0045087 GO:0045491 GO:0045493 GO:0046556 GO:0048046 GO:0050896 GO:0051704 GO:0051707 GO:0071554 GO:0071704 GO:0071944 GO:0097599 GO:0098542 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00520 ko01100 map00520 map01100

Pfam Domains

Protein Families

Fn3-like Glyco_hydro_3 Glyco_hydro_3_C

Protein Analysis

773

Amino Acids

83.22

Weight (kDa)

7.24

Isoelectric Point (pI)

32.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_3	PF00933	115 - 357	8.7e-36	Glycosyl hydrolase family 3 N terminal domain
Glyco_hydro_3_C	PF01915	404 - 632	1.2e-48	Glycosyl hydrolase family 3 C-terminal domain
Fn3-like	PF14310	697 - 764	3.9e-10	Fibronectin type III-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003333)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G09730 AT5G64570 AT5G64570 AT5G64570
fragaria_vesca	FvH4_5g30690 FvH4_5g30710 FvH4_5g30710 FvH4_5g30710 FvH4_5g30710
malus_domestica	MD08G1221800.v1.1 MD15G1414100.v1.1
prunus_persica	Prupe.1G559400_v2.0.a1 Prupe.1G559400_v2.0.a1
pyrus_communis	pycom08g19240 pycom15g36840
rosa_chinensis	RchiOBHm_Chr7g0225551 RchiOBHm_Chr7g0225581
rosa_laevigata	RLG00000001804 RLG00000001806
rosa_multiflora	Rmu_co8377913.1_g000001 Rmu_sc0003876.1_g000021 Rmu_sc0006321.1_g000006
rosa_roxburghii	Rroxscaffold_3G00233670 Rroxscaffold_3G00233690
rosa_rugosa	Rorug07G0231600 Rorug07G0231800
rosa_samantha	Rh7AG372300 Rh7AG372500 Rh7BG365400 Rh7BG365500 Rh7CG390600 Rh7CG390800 Rh7DG376200 Rh7DG376300
rosa_wichuraiana	Rw7G031750 Rw7G031760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	3 cut(s)	114, 1726, 2114
Acc36I	ACCTGC	1 cut(s)	965
AccB1I	GGYRCC	1 cut(s)	347
AccB7I	CCANNNNNTGG	1 cut(s)	1990
AccBSI	CCGCTC	3 cut(s)	1025, 1246, 2081
AccI	GTMKAC	3 cut(s)	1382, 1521, 1869
AccII	CGCG	7 cut(s)	155, 858, 1016, 1085, 1886, 1997, 2261
AclI	AACGTT	1 cut(s)	473
AclWI	GGATC	8 cut(s)	466, 605, 824, 847, 1449, 2041, 2137, 2229
AcoI	YGGCCR	2 cut(s)	378, 957
AcsI	RAATTY	2 cut(s)	1741, 1901
AcuI	CTGAAG	2 cut(s)	575, 1340
AcyI	GRCGYC	5 cut(s)	111, 300, 348, 1723, 2111
AdeI	CACNNNGTG	1 cut(s)	2095
AfaI	GTAC	5 cut(s)	449, 1332, 1343, 1772, 2124
AfiI	CCNNNNNNNGG	6 cut(s)	514, 515, 1358, 1975, 1990, 2250
AflII	CTTAAG	1 cut(s)	1220
AflIII	ACRYGT	1 cut(s)	821
AgeI	ACCGGT	2 cut(s)	332, 1585
AjiI	CACGTC	1 cut(s)	1755
AjnI	CCWGG	3 cut(s)	343, 1534, 1678
Alw21I	GWGCWC	2 cut(s)	22, 1473
AlwI	GGATC	8 cut(s)	466, 605, 824, 847, 1449, 2041, 2137, 2229
Ama87I	CYCGRG	3 cut(s)	174, 508, 1560
AoxI	GGCC	4 cut(s)	378, 573, 957, 1507
ApeKI	GCWGC	7 cut(s)	632, 639, 868, 1129, 1448, 1543, 1574
ApoI	RAATTY	2 cut(s)	1741, 1901
ArsI	GACNNNNNNTTYG	8 cut(s)	71, 103, 162, 194, 1613, 1645, 1700, 1732
AsiGI	ACCGGT	2 cut(s)	332, 1585
Asp700I	GAANNNNTTC	3 cut(s)	124, 497, 1782
AspLEI	GCGC	5 cut(s)	350, 1199, 1484, 1888, 1927
AspS9I	GGNCC	7 cut(s)	505, 544, 1148, 1283, 1507, 1583, 2003
AsuC2I	CCSGG	5 cut(s)	136, 503, 537, 1833, 2245
AsuHPI	GGTGA	7 cut(s)	106, 172, 322, 474, 551, 1242, 1694
AvaI	CYCGRG	3 cut(s)	174, 508, 1560
AvaII	GGWCC	6 cut(s)	505, 544, 1148, 1283, 1583, 2003
AxyI	CCTNAGG	1 cut(s)	1152
BaeI	ACNNNNGTAYC	2 cut(s)	1666, 1699
BalI	TGGCCA	1 cut(s)	959
BanI	GGYRCC	1 cut(s)	347
BarI	GAAGNNNNNNTAC	2 cut(s)	1118, 1150
BauI	CACGAG	1 cut(s)	1472
BbsI	GAAGAC	3 cut(s)	81, 91, 581
Bbv12I	GWGCWC	2 cut(s)	22, 1473
BbvI	GCAGC	7 cut(s)	619, 626, 880, 1141, 1435, 1555, 1586
BccI	CCATC	6 cut(s)	507, 761, 1012, 1106, 1187, 1917
BceAI	ACGGC	4 cut(s)	393, 1259, 1421, 2006
BcgI	CGANNNNNNTGC	4 cut(s)	223, 257, 1075, 1109
BciT130I	CCWGG	3 cut(s)	345, 1536, 1680
BciVI	GTATCC	4 cut(s)	872, 1667, 1770, 1839
BclI	TGATCA	1 cut(s)	994
BcnI	CCSGG	5 cut(s)	136, 503, 537, 1833, 2245
BfaI	CTAG	4 cut(s)	354, 780, 1595, 2150
BfoI	RGCGCY	2 cut(s)	351, 1928
BfrI	CTTAAG	1 cut(s)	1220
BfuAI	ACCTGC	1 cut(s)	965
BfuI	GTATCC	4 cut(s)	872, 1667, 1770, 1839
BglII	AGATCT	1 cut(s)	721
BlpI	GCTNAGC	1 cut(s)	1432
Bme1390I	CCNGG	8 cut(s)	136, 345, 503, 537, 1536, 1680, 1833, 2245
Bme18I	GGWCC	6 cut(s)	505, 544, 1148, 1283, 1583, 2003
BmeT110I	CYCGRG	3 cut(s)	174, 508, 1560
BmgBI	CACGTC	1 cut(s)	1755
BmgT120I	GGNCC	7 cut(s)	505, 544, 1148, 1283, 1507, 1583, 2003
BmiI	GGNNCC	4 cut(s)	349, 506, 507, 546
BmrFI	CCNGG	8 cut(s)	136, 345, 503, 537, 1536, 1680, 1833, 2245
BmrI	ACTGGG	1 cut(s)	1403
BmsI	GCATC	4 cut(s)	72, 1083, 1408, 1450
BmuI	ACTGGG	1 cut(s)	1403
BpiI	GAAGAC	3 cut(s)	81, 91, 581
BpmI	CTGGAG	2 cut(s)	78, 927
Bpu1102I	GCTNAGC	1 cut(s)	1432
BpuEI	CTTGAG	1 cut(s)	541
BpuMI	CCSGG	5 cut(s)	136, 503, 537, 1833, 2245
BsaAI	YACGTR	1 cut(s)	1774
BsaBI	GATNNNNATC	1 cut(s)	834
BsaHI	GRCGYC	5 cut(s)	111, 300, 348, 1723, 2111
BsaI	GGTCTC	4 cut(s)	1110, 1700, 1801, 2234
BsaJI	CCNNGG	6 cut(s)	256, 343, 856, 1324, 1437, 1678
BsaWI	WCCGGW	7 cut(s)	116, 332, 845, 1585, 1607, 1856, 2069
BsaXI	ACNNNNNCTCC	2 cut(s)	1851, 1881
Bsc4I	CCNNNNNNNGG	6 cut(s)	514, 515, 1358, 1975, 1990, 2250
Bse118I	RCCGGY	4 cut(s)	332, 464, 1585, 1688
Bse1I	ACTGG	2 cut(s)	95, 1398
Bse21I	CCTNAGG	1 cut(s)	1152
Bse3DI	GCAATG	2 cut(s)	450, 1701
Bse8I	GATNNNNATC	1 cut(s)	834
BseBI	CCWGG	3 cut(s)	345, 1536, 1680
BseDI	CCNNGG	6 cut(s)	256, 343, 856, 1324, 1437, 1678
BseGI	GGATG	3 cut(s)	1162, 1403, 1465
BseJI	GATNNNNATC	1 cut(s)	834
BseLI	CCNNNNNNNGG	6 cut(s)	514, 515, 1358, 1975, 1990, 2250
BseMI	GCAATG	2 cut(s)	450, 1701
BseMII	CTCAG	3 cut(s)	1446, 1957, 2216
BseNI	ACTGG	2 cut(s)	95, 1398
BseRI	GAGGAG	1 cut(s)	224
BseX3I	CGGCCG	1 cut(s)	378
BseXI	GCAGC	7 cut(s)	619, 626, 880, 1141, 1435, 1555, 1586
Bsh1236I	CGCG	7 cut(s)	155, 858, 1016, 1085, 1886, 1997, 2261
Bsh1285I	CGRYCG	2 cut(s)	381, 2001
BshFI	GGCC	4 cut(s)	380, 575, 959, 1509
BshNI	GGYRCC	1 cut(s)	347
BshTI	ACCGGT	2 cut(s)	332, 1585
BsiEI	CGRYCG	2 cut(s)	381, 2001
BsiHKAI	GWGCWC	2 cut(s)	22, 1473
BsiHKCI	CYCGRG	3 cut(s)	174, 508, 1560
BsiWI	CGTACG	1 cut(s)	1770
BslFI	GGGAC	2 cut(s)	326, 518
BslI	CCNNNNNNNGG	6 cut(s)	514, 515, 1358, 1975, 1990, 2250
BsmBI	CGTCTC	4 cut(s)	307, 626, 695, 1942
BsmFI	GGGAC	2 cut(s)	326, 518
BsnI	GGCC	4 cut(s)	380, 575, 959, 1509
Bso31I	GGTCTC	4 cut(s)	1110, 1700, 1801, 2234
BsoBI	CYCGRG	3 cut(s)	174, 508, 1560
Bsp1286I	GDGCHC	2 cut(s)	22, 1473
Bsp1407I	TGTACA	1 cut(s)	447
Bsp1720I	GCTNAGC	1 cut(s)	1432
Bsp68I	TCGCGA	1 cut(s)	1085
BspANI	GGCC	4 cut(s)	380, 575, 959, 1509
BspCNI	CTCAG	3 cut(s)	1445, 1956, 2217
BspFNI	CGCG	7 cut(s)	155, 858, 1016, 1085, 1886, 1997, 2261
BspLI	GGNNCC	4 cut(s)	349, 506, 507, 546
BspMI	ACCTGC	1 cut(s)	965
BspPI	GGATC	8 cut(s)	466, 605, 824, 847, 1449, 2041, 2137, 2229
BspT107I	GGYRCC	1 cut(s)	347
BspTI	CTTAAG	1 cut(s)	1220
BspTNI	GGTCTC	4 cut(s)	1110, 1700, 1801, 2234
BsrBI	CCGCTC	3 cut(s)	1025, 1246, 2081
BsrDI	GCAATG	2 cut(s)	450, 1701
BsrFI	RCCGGY	4 cut(s)	332, 464, 1585, 1688
BsrGI	TGTACA	1 cut(s)	447
BsrI	ACTGG	2 cut(s)	95, 1398
BssAI	RCCGGY	4 cut(s)	332, 464, 1585, 1688
BssECI	CCNNGG	6 cut(s)	256, 343, 856, 1324, 1437, 1678
BssNAI	GTATAC	1 cut(s)	1870
BssNI	GRCGYC	5 cut(s)	111, 300, 348, 1723, 2111
BssSI	CACGAG	1 cut(s)	1472
BssT1I	CCWWGG	1 cut(s)	256
Bst1107I	GTATAC	1 cut(s)	1870
Bst2BI	CACGAG	1 cut(s)	1472
Bst2UI	CCWGG	3 cut(s)	345, 1536, 1680
Bst4CI	ACNGT	9 cut(s)	605, 620, 747, 812, 1139, 1328, 1375, 1867, 2095
Bst6I	CTCTTC	3 cut(s)	29, 514, 2243
BstACI	GRCGYC	5 cut(s)	111, 300, 348, 1723, 2111
BstAFI	CTTAAG	1 cut(s)	1220
BstAUI	TGTACA	1 cut(s)	447
BstBAI	YACGTR	1 cut(s)	1774
BstC8I	GCNNGC	3 cut(s)	7, 637, 1411
BstDEI	CTNAG	7 cut(s)	140, 936, 1122, 1152, 1432, 1943, 2225
BstDSI	CCRYGG	3 cut(s)	856, 1324, 1437
BstEII	GGTNACC	1 cut(s)	480
BstF5I	GGATG	3 cut(s)	1162, 1403, 1465
BstFNI	CGCG	7 cut(s)	155, 858, 1016, 1085, 1886, 1997, 2261
BstH2I	RGCGCY	2 cut(s)	351, 1928
BstHHI	GCGC	5 cut(s)	350, 1199, 1484, 1888, 1927
BstMCI	CGRYCG	2 cut(s)	381, 2001
BstMWI	GCNNNNNNNGC	7 cut(s)	252, 354, 1022, 1031, 1454, 1549, 1574
BstNI	CCWGG	3 cut(s)	345, 1536, 1680
BstNSI	RCATGY	2 cut(s)	776, 825
BstPI	GGTNACC	1 cut(s)	480
BstSCI	CCNGG	8 cut(s)	134, 343, 501, 535, 1534, 1678, 1831, 2243
BstUI	CGCG	7 cut(s)	155, 858, 1016, 1085, 1886, 1997, 2261
BstV1I	GCAGC	7 cut(s)	619, 626, 880, 1141, 1435, 1555, 1586
BstV2I	GAAGAC	3 cut(s)	81, 91, 581
BstX2I	RGATCY	5 cut(s)	610, 721, 1441, 2129, 2221
BstXI	CCANNNNNNTGG	1 cut(s)	413
BstYI	RGATCY	5 cut(s)	610, 721, 1441, 2129, 2221
BstZ17I	GTATAC	1 cut(s)	1870
BstZI	CGGCCG	1 cut(s)	378
Bsu36I	CCTNAGG	1 cut(s)	1152
BsuI	GTATCC	4 cut(s)	872, 1667, 1770, 1839
BsuRI	GGCC	4 cut(s)	380, 575, 959, 1509
BtgI	CCRYGG	3 cut(s)	856, 1324, 1437
BtgZI	GCGATG	1 cut(s)	1031
BtrI	CACGTC	1 cut(s)	1755
BtsCI	GGATG	3 cut(s)	1162, 1403, 1465
BtsI	GCAGTG	2 cut(s)	576, 2008
BtsIMutI	CAGTG	2 cut(s)	576, 2008
BtuMI	TCGCGA	1 cut(s)	1085
BveI	ACCTGC	1 cut(s)	965
Cac8I	GCNNGC	3 cut(s)	7, 637, 1411
CfoI	GCGC	5 cut(s)	350, 1199, 1484, 1888, 1927
Cfr10I	RCCGGY	4 cut(s)	332, 464, 1585, 1688
Cfr13I	GGNCC	7 cut(s)	505, 544, 1148, 1283, 1507, 1583, 2003
Cfr42I	CCGCGG	1 cut(s)	859
CseI	GACGC	3 cut(s)	289, 1892, 2003
Csp6I	GTAC	5 cut(s)	448, 1331, 1342, 1771, 2123
CspAI	ACCGGT	2 cut(s)	332, 1585
CviAII	CATG	9 cut(s)	296, 773, 787, 822, 1335, 1511, 1603, 1804, 2282
CviQI	GTAC	5 cut(s)	448, 1331, 1342, 1771, 2123
DdeI	CTNAG	7 cut(s)	140, 936, 1122, 1152, 1432, 1943, 2225
DinI	GGCGCC	1 cut(s)	349
DraIII	CACNNNGTG	1 cut(s)	2095
EaeI	YGGCCR	2 cut(s)	378, 957
EagI	CGGCCG	1 cut(s)	378
Eam1104I	CTCTTC	3 cut(s)	29, 514, 2243
EarI	CTCTTC	3 cut(s)	29, 514, 2243
EclXI	CGGCCG	1 cut(s)	378
Eco130I	CCWWGG	1 cut(s)	256
Eco31I	GGTCTC	4 cut(s)	1110, 1700, 1801, 2234
Eco47I	GGWCC	6 cut(s)	505, 544, 1148, 1283, 1583, 2003
Eco52I	CGGCCG	1 cut(s)	378
Eco57I	CTGAAG	2 cut(s)	575, 1340
Eco81I	CCTNAGG	1 cut(s)	1152
Eco88I	CYCGRG	3 cut(s)	174, 508, 1560
Eco91I	GGTNACC	1 cut(s)	480
EcoO109I	RGGNCCY	2 cut(s)	505, 544
EcoO65I	GGTNACC	1 cut(s)	480
EcoRII	CCWGG	3 cut(s)	343, 1534, 1678
EcoT14I	CCWWGG	1 cut(s)	256
EgeI	GGCGCC	1 cut(s)	349
EheI	GGCGCC	1 cut(s)	349
ErhI	CCWWGG	1 cut(s)	256
Esp3I	CGTCTC	4 cut(s)	307, 626, 695, 1942
FaeI	CATG	9 cut(s)	299, 776, 790, 825, 1338, 1514, 1606, 1807, 2285
FaqI	GGGAC	2 cut(s)	326, 518
FatI	CATG	9 cut(s)	295, 772, 786, 821, 1334, 1510, 1602, 1803, 2281
FauI	CCCGC	3 cut(s)	148, 1027, 2074
FbaI	TGATCA	1 cut(s)	994
FblI	GTMKAC	3 cut(s)	1382, 1521, 1869
FokI	GGATG	3 cut(s)	1169, 1410, 1472
FspBI	CTAG	4 cut(s)	354, 780, 1595, 2150
GlaI	GCGC	5 cut(s)	349, 1198, 1483, 1887, 1926
GsuI	CTGGAG	2 cut(s)	78, 927
HaeII	RGCGCY	2 cut(s)	351, 1928
HaeIII	GGCC	4 cut(s)	380, 575, 959, 1509
HgaI	GACGC	3 cut(s)	289, 1892, 2003
HhaI	GCGC	5 cut(s)	350, 1199, 1484, 1888, 1927
Hin1I	GRCGYC	5 cut(s)	111, 300, 348, 1723, 2111
Hin1II	CATG	9 cut(s)	299, 776, 790, 825, 1338, 1514, 1606, 1807, 2285
Hin6I	GCGC	5 cut(s)	348, 1197, 1482, 1886, 1925
HinP1I	GCGC	5 cut(s)	348, 1197, 1482, 1886, 1925
HincII	GTYRAC	3 cut(s)	808, 1010, 1522
HindII	GTYRAC	3 cut(s)	808, 1010, 1522
HindIII	AAGCTT	1 cut(s)	2290
HpaI	GTTAAC	1 cut(s)	808
HphI	GGTGA	7 cut(s)	106, 172, 322, 474, 551, 1242, 1694
Hpy188III	TCNNGA	7 cut(s)	593, 751, 833, 944, 1084, 1949, 2107
Hpy99I	CGWCG	4 cut(s)	314, 1955, 2113, 2116
HpyAV	CCTTC	3 cut(s)	135, 1263, 1885
HpyCH4III	ACNGT	9 cut(s)	605, 620, 747, 812, 1139, 1328, 1375, 1867, 2095
HpyCH4V	TGCA	5 cut(s)	63, 150, 642, 1164, 1338
HpyF10VI	GCNNNNNNNGC	7 cut(s)	252, 354, 1022, 1031, 1454, 1549, 1574
HpyF3I	CTNAG	7 cut(s)	140, 936, 1122, 1152, 1432, 1943, 2225
Hsp92I	GRCGYC	5 cut(s)	111, 300, 348, 1723, 2111
Hsp92II	CATG	9 cut(s)	299, 776, 790, 825, 1338, 1514, 1606, 1807, 2285
HspAI	GCGC	5 cut(s)	348, 1197, 1482, 1886, 1925
KasI	GGCGCC	1 cut(s)	347
KflI	GGGWCCC	1 cut(s)	505
Ksp22I	TGATCA	1 cut(s)	994
KspAI	GTTAAC	1 cut(s)	808
KspI	CCGCGG	1 cut(s)	859
LmnI	GCTCC	1 cut(s)	1022
Lsp1109I	GCAGC	7 cut(s)	619, 626, 880, 1141, 1435, 1555, 1586
LweI	GCATC	4 cut(s)	72, 1083, 1408, 1450
MaeI	CTAG	4 cut(s)	354, 780, 1595, 2150
MaeIII	GTNAC	7 cut(s)	107, 112, 178, 480, 1400, 1555, 1841
MbiI	CCGCTC	3 cut(s)	1025, 1246, 2081
MfeI	CAATTG	2 cut(s)	670, 1494
MflI	RGATCY	5 cut(s)	610, 721, 1441, 2129, 2221
MhlI	GDGCHC	2 cut(s)	22, 1473
MlsI	TGGCCA	1 cut(s)	959
MluCI	AATT	6 cut(s)	670, 988, 1078, 1494, 1741, 1901
MluNI	TGGCCA	1 cut(s)	959
Mly113I	GGCGCC	1 cut(s)	348
MlyI	GAGTC	7 cut(s)	186, 526, 934, 1081, 1527, 1552, 1926
MmeI	TCCRAC	6 cut(s)	172, 186, 264, 292, 1651, 1817
Mox20I	TGGCCA	1 cut(s)	959
MroXI	GAANNNNTTC	3 cut(s)	124, 497, 1782
MscI	TGGCCA	1 cut(s)	959
MseI	TTAA	6 cut(s)	470, 582, 807, 1221, 2139, 2202
MslI	CAYNNNNRTG	3 cut(s)	1002, 1978, 2055
Msp20I	TGGCCA	1 cut(s)	959
MspA1I	CMGCKG	2 cut(s)	858, 1169
MspCI	CTTAAG	1 cut(s)	1220
MspR9I	CCNGG	8 cut(s)	136, 345, 503, 537, 1536, 1680, 1833, 2245
MunI	CAATTG	2 cut(s)	670, 1494
MvaI	CCWGG	3 cut(s)	345, 1536, 1680
MvnI	CGCG	7 cut(s)	155, 858, 1016, 1085, 1886, 1997, 2261
MwoI	GCNNNNNNNGC	7 cut(s)	252, 354, 1022, 1031, 1454, 1549, 1574
NarI	GGCGCC	1 cut(s)	348
NciI	CCSGG	5 cut(s)	136, 503, 537, 1833, 2245
NlaIII	CATG	9 cut(s)	299, 776, 790, 825, 1338, 1514, 1606, 1807, 2285
NlaIV	GGNNCC	4 cut(s)	349, 506, 507, 546
NmuCI	GTSAC	5 cut(s)	107, 112, 178, 480, 1555
NruI	TCGCGA	1 cut(s)	1085
NspI	RCATGY	2 cut(s)	776, 825
PaeR7I	CTCGAG	1 cut(s)	1560
PciI	ACATGT	1 cut(s)	821
PcsI	WCGNNNNNNNCGW	3 cut(s)	108, 434, 1410
PdmI	GAANNNNTTC	3 cut(s)	124, 497, 1782
PfeI	GAWTC	4 cut(s)	144, 262, 899, 2164
Pfl23II	CGTACG	1 cut(s)	1770
PflFI	GACNNNGTC	1 cut(s)	1517
PflMI	CCANNNNNTGG	1 cut(s)	1990
PfoI	TCCNGGA	2 cut(s)	501, 1534
PinAI	ACCGGT	2 cut(s)	332, 1585
Ple19I	CGATCG	1 cut(s)	2001
PleI	GAGTC	7 cut(s)	185, 526, 934, 1081, 1526, 1552, 1926
PluTI	GGCGCC	1 cut(s)	351
PpsI	GAGTC	7 cut(s)	185, 526, 934, 1081, 1526, 1552, 1926
Ppu21I	YACGTR	1 cut(s)	1774
PpuMI	RGGWCCY	2 cut(s)	505, 544
PscI	ACATGT	1 cut(s)	821
Psp1406I	AACGTT	1 cut(s)	473
Psp5II	RGGWCCY	2 cut(s)	505, 544
Psp6I	CCWGG	3 cut(s)	343, 1534, 1678
PspEI	GGTNACC	1 cut(s)	480
PspGI	CCWGG	3 cut(s)	343, 1534, 1678
PspLI	CGTACG	1 cut(s)	1770
PspN4I	GGNNCC	4 cut(s)	349, 506, 507, 546
PspPI	GGNCC	7 cut(s)	505, 544, 1148, 1283, 1507, 1583, 2003
PspPPI	RGGWCCY	2 cut(s)	505, 544
PspXI	VCTCGAGB	1 cut(s)	1560
PsuI	RGATCY	5 cut(s)	610, 721, 1441, 2129, 2221
PsyI	GACNNNGTC	1 cut(s)	1517
PvuI	CGATCG	1 cut(s)	2001
RruI	TCGCGA	1 cut(s)	1085
RsaI	GTAC	5 cut(s)	449, 1332, 1343, 1772, 2124
RsaNI	GTAC	5 cut(s)	448, 1331, 1342, 1771, 2123
RseI	CAYNNNNRTG	3 cut(s)	1002, 1978, 2055
SacII	CCGCGG	1 cut(s)	859
SalI	GTCGAC	1 cut(s)	1520
SaqAI	TTAA	6 cut(s)	470, 582, 807, 1221, 2139, 2202
Sau96I	GGNCC	7 cut(s)	505, 544, 1148, 1283, 1507, 1583, 2003
SchI	GAGTC	7 cut(s)	186, 526, 934, 1081, 1527, 1552, 1926
ScrFI	CCNGG	8 cut(s)	136, 345, 503, 537, 1536, 1680, 1833, 2245
SduI	GDGCHC	2 cut(s)	22, 1473
SfaNI	GCATC	4 cut(s)	72, 1083, 1408, 1450
SfoI	GGCGCC	1 cut(s)	349
Sfr274I	CTCGAG	1 cut(s)	1560
Sfr303I	CCGCGG	1 cut(s)	859
SgrBI	CCGCGG	1 cut(s)	859
SinI	GGWCC	6 cut(s)	505, 544, 1148, 1283, 1583, 2003
SlaI	CTCGAG	1 cut(s)	1560
SmiMI	CAYNNNNRTG	3 cut(s)	1002, 1978, 2055
SmlI	CTYRAG	3 cut(s)	556, 1220, 1560
SmoI	CTYRAG	3 cut(s)	556, 1220, 1560
Sse9I	AATT	6 cut(s)	670, 988, 1078, 1494, 1741, 1901
SspDI	GGCGCC	1 cut(s)	347
SspMI	CTAG	4 cut(s)	354, 780, 1595, 2150
StyD4I	CCNGG	8 cut(s)	134, 343, 501, 535, 1534, 1678, 1831, 2243
StyI	CCWWGG	1 cut(s)	256
TaaI	ACNGT	9 cut(s)	605, 620, 747, 812, 1139, 1328, 1375, 1867, 2095
TaqI	TCGA	8 cut(s)	77, 428, 1110, 1521, 1561, 1905, 1950, 2043
TaqII	GACCGA	1 cut(s)	1530
TasI	AATT	6 cut(s)	670, 988, 1078, 1494, 1741, 1901
TatI	WGTACW	3 cut(s)	447, 1341, 2122
TauI	GCSGC	4 cut(s)	255, 383, 1354, 2119
TfiI	GAWTC	4 cut(s)	144, 262, 899, 2164
Tru1I	TTAA	6 cut(s)	470, 582, 807, 1221, 2139, 2202
Tru9I	TTAA	6 cut(s)	470, 582, 807, 1221, 2139, 2202
TscAI	CASTG	2 cut(s)	576, 2015
TseFI	GTSAC	5 cut(s)	107, 112, 178, 480, 1555
TseI	GCWGC	7 cut(s)	632, 639, 868, 1129, 1448, 1543, 1574
Tsp45I	GTSAC	5 cut(s)	107, 112, 178, 480, 1555
TspDTI	ATGAA	4 cut(s)	43, 284, 1814, 2039
TspGWI	ACGGA	3 cut(s)	255, 891, 2142
TspRI	CASTG	2 cut(s)	576, 2015
Tth111I	GACNNNGTC	1 cut(s)	1517
Van91I	CCANNNNNTGG	1 cut(s)	1990
Vha464I	CTTAAG	1 cut(s)	1220
VpaK11BI	GGWCC	6 cut(s)	505, 544, 1148, 1283, 1583, 2003
XapI	RAATTY	2 cut(s)	1741, 1901
XceI	RCATGY	2 cut(s)	776, 825
XcmI	CCANNNNNNNNNTGG	1 cut(s)	967
XhoI	CTCGAG	1 cut(s)	1560
XmiI	GTMKAC	3 cut(s)	1382, 1521, 1869
XmnI	GAANNNNTTC	3 cut(s)	124, 497, 1782
XspI	CTAG	4 cut(s)	354, 780, 1595, 2150
ZraI	GACGTC	3 cut(s)	112, 1724, 2112

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.