Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0003333

Physical Location & Seq

Genomic Coordinates Forward (+)

49440780 .. 49445243

Gene Structure 4464 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG390600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1776 bp

ATGGCCTCCTTTTTTTTCTTTTCCTCTGTTCAGAACAGAGTACTTCAAAACAGAGCAGTGCCGAAGGCCTTGCTCTGTTTTACTCTCTGTTACATACTGATGTTATCTTTCTGTATGAGCTCAGTTTCCGGCCAGTCATTTGCCTGCGGTGGCGGTTCCAACAGCTTCCCGTTCTGCGACAAGTCGTTGGCGGCCGATGCGCGGGTGGCGGACCTCGTGAAGAGGCTGACATTGCAGGAGAAGATTACGTTTCTGGTGAACAGTGCAGGGAGTGTGAGCAGGCTTGGAATTCCCAAGTACGAGTGGTGGTCGGAGGCTTTACACGGTGTGTCGTACGTCGGCCCCGGGACCAAGTTTTCGAATGTCGTCCCCGGAGCTACCAGCTTCCCTCAGCCCATTTTGACCGCAGCGTCGTTCAACAACTCTCTCTACGAAGCCATCGGAAGGGTGGTGTCAACTGAGGCCAGAGCAATGTACAATGTGGGATTGGCAGGATTGACATTCTGGTCCCCAAACATTAACATTTTCCGAGACCCGAGATGGGGAAGAGGCCAAGAGACTCCGGGAGAAGACCCATTGCTCACGAGTAACTACGGATCAGGATACGTTAGAGGTCTTCAACAAACCGATAGCGGAGACAAAAATAGGCTTAAAGTTGCAGCATGTTGTAAACATTATACAGCCTATGATTTGGACAATTGGAAAGGAACTGACAGATACCATTTCAATGCAGTGGTAACAAAACAAGACATGGATGATACATTTCAGCCACCATTCAAAAGTTGTGTTCTTGATGGGAATGTTGCTAGTGTCATGTGTTCTTACAACCAGGTTAATGGAATACCTACCTGCGCAGACCCAAACCTTCTTTCTGGGGTTATCCGAGGCGAATGGAAGTTGAATGGATACATAGTCACTGATTGTGATTCAATAGATGTGTACTACAAGAACCAACACTACACCAAGACACCAGAAGAGGCAGCAGCCAAGGCTATATTAGCAGGTTTGGATCTAAACTGTGGATCATTCTTAGGACAGTACACAGAAGGAGCAGTGAAAGGAGGACTTGTAACTGAGGCAGCCATTGACAAGGCCATCACAAACAATTTTGGCACATTGATGCGTCTAGGCTTCTTCGATGGTGATCCAAGCAAGCAACCATATGGACATCTCGGTCCAAAGGATGTGTGCACTCCACAGAACCAGGAGCTGGCACGTGAAACAGCAAGACAAGGGATAGTGTTGCTCAAGAACACTCCAGGATCACTGCCTCTGTCTCCCACAGCCATCAAATCCTTGGCAGTTATAGGTCCCAATGGCAATGTCACAAAGACTATGATTGGAAACTACGAAGGCAACCCTTGCAAATATACAACTCCTTTGCAAGGCCTAACAGCCGTAGTTCCCACAACATTTGTGGCCGGGTGCGCTGATGTGGCTTGTGGCACTGCCCAGGTAGATGGTGCTACCAAGTTAGCAGCCGCAGCAGATGCAACTGTACTTATAGTGGGTGAAAATCAATCAATTGAGACTGAAAGTCACGATAGAATCGACCTCCATCTTCCAGGACAGCAAACTCTTCTAATAACTGAAGTAGCGAAGGCTTCTAAAGGACCTGTAATCCTTGTCATAATGTCTGGAGGAGGGTTCGATATTACCTTTGCGAAAAATGATGATAAAATTACAAGCATTCTATGGGTTGGTTACCCTGGCGAAGCTGGTGGAGCTGCCATTGCTGACGTGATTTTTGGCTTTTATAATCCAAGTAAGCTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0002376 GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005576 GO:0005618 GO:0005623 GO:0005975 GO:0005976 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009044 GO:0009056 GO:0009057 GO:0009605 GO:0009607 GO:0009627 GO:0009814 GO:0009987 GO:0010383 GO:0010410 GO:0016052 GO:0016787 GO:0016798 GO:0030312 GO:0031221 GO:0031222 GO:0043170 GO:0043207 GO:0044036 GO:0044237 GO:0044238 GO:0044260 GO:0044464 GO:0045087 GO:0045491 GO:0045493 GO:0046556 GO:0048046 GO:0050896 GO:0051704 GO:0051707 GO:0071554 GO:0071704 GO:0071944 GO:0097599 GO:0098542 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00520 ko01100 map00520 map01100

Pfam Domains

Protein Families

Fn3-like Glyco_hydro_3 Glyco_hydro_3_C

Protein Analysis

591

Amino Acids

63.29

Weight (kDa)

6.03

Isoelectric Point (pI)

32.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_3	PF00933	123 - 366	4.6e-34	Glycosyl hydrolase family 3 N terminal domain
Glyco_hydro_3_C	PF01915	413 - 589	1.9e-39	Glycosyl hydrolase family 3 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003333)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G09730 AT5G64570 AT5G64570 AT5G64570
fragaria_vesca	FvH4_5g30690 FvH4_5g30710 FvH4_5g30710 FvH4_5g30710 FvH4_5g30710
malus_domestica	MD08G1221800.v1.1 MD15G1414100.v1.1
prunus_persica	Prupe.1G559400_v2.0.a1 Prupe.1G559400_v2.0.a1
pyrus_communis	pycom08g19240 pycom15g36840
rosa_chinensis	RchiOBHm_Chr7g0225551 RchiOBHm_Chr7g0225581
rosa_laevigata	RLG00000001804 RLG00000001806
rosa_multiflora	Rmu_co8377913.1_g000001 Rmu_sc0003876.1_g000021 Rmu_sc0006321.1_g000006
rosa_roxburghii	Rroxscaffold_3G00233670 Rroxscaffold_3G00233690
rosa_rugosa	Rorug07G0231600 Rorug07G0231800
rosa_samantha	Rh7AG372300 Rh7AG372500 Rh7BG365400 Rh7BG365500 Rh7CG390600 Rh7CG390800 Rh7DG376200 Rh7DG376300
rosa_wichuraiana	Rw7G031750 Rw7G031760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1758
AasI	GACNNNNNNGTC	3 cut(s)	409, 505, 1173
Acc16I	TGCGCA	1 cut(s)	853
Acc36I	ACCTGC	2 cut(s)	857, 992
AccB7I	CCANNNNNTGG	1 cut(s)	1210
AccII	CGCG	1 cut(s)	202
AciI	CCGC	8 cut(s)	147, 153, 191, 202, 209, 405, 633, 1482
AclWI	GGATC	5 cut(s)	604, 1017, 1030, 1139, 1270
AcoI	YGGCCR	3 cut(s)	130, 192, 1419
AcsI	RAATTY	1 cut(s)	288
AcuI	CTGAAG	1 cut(s)	1611
AcvI	CACGTG	1 cut(s)	1217
AdeI	CACNNNGTG	1 cut(s)	328
AfaI	GTAC	7 cut(s)	42, 299, 335, 476, 941, 1040, 1500
AfiI	CCNNNNNNNGG	6 cut(s)	201, 444, 541, 542, 1210, 1385
AgsI	TTSAA	7 cut(s)	47, 418, 620, 727, 778, 901, 930
AhdI	GACNNNNNGTC	1 cut(s)	1536
AjiI	CACGTC	1 cut(s)	1741
AjnI	CCWGG	6 cut(s)	828, 1203, 1258, 1452, 1564, 1708
AjuI	GAANNNNNNNTTGG	2 cut(s)	853, 885
AluBI	AGCT	8 cut(s)	120, 165, 377, 384, 1210, 1718, 1727, 1771
AluI	AGCT	8 cut(s)	120, 165, 377, 384, 1210, 1718, 1727, 1771
Alw21I	GWGCWC	2 cut(s)	122, 1193
Alw26I	GTCTC	5 cut(s)	525, 551, 630, 1281, 1523
Alw44I	GTGCAC	1 cut(s)	1189
AlwI	GGATC	5 cut(s)	604, 1017, 1030, 1139, 1270
AlwNI	CAGNNNCTG	1 cut(s)	1210
Ama87I	CYCGRG	2 cut(s)	344, 535
ApaLI	GTGCAC	1 cut(s)	1189
ApeKI	GCWGC	8 cut(s)	407, 659, 980, 983, 1079, 1478, 1484, 1727
ApoI	RAATTY	1 cut(s)	288
ArsI	GACNNNNNNTTYG	4 cut(s)	340, 372, 1730, 1762
AspLEI	GCGC	3 cut(s)	202, 854, 1430
AspS9I	GGNCC	7 cut(s)	211, 341, 348, 507, 1175, 1310, 1613
AsuC2I	CCSGG	5 cut(s)	345, 346, 372, 564, 1423
AsuHPI	GGTGA	3 cut(s)	268, 1154, 1523
AsuII	TTCGAA	1 cut(s)	359
AvaI	CYCGRG	2 cut(s)	344, 535
AvaII	GGWCC	6 cut(s)	211, 348, 507, 1175, 1310, 1613
BaeGI	GKGCMC	1 cut(s)	1193
BanII	GRGCYC	1 cut(s)	122
BauI	CACGAG	2 cut(s)	215, 583
BbrPI	CACGTG	1 cut(s)	1217
BbsI	GAAGAC	2 cut(s)	576, 608
Bbv12I	GWGCWC	2 cut(s)	122, 1193
BbvCI	CCTCAGC	1 cut(s)	390
BbvI	GCAGC	8 cut(s)	419, 671, 992, 995, 1091, 1490, 1496, 1714
BccI	CCATC	8 cut(s)	446, 534, 788, 1103, 1133, 1295, 1454, 1566
BceAI	ACGGC	1 cut(s)	1382
BcgI	CGANNNNNNTGC	2 cut(s)	52, 86
BciT130I	CCWGG	6 cut(s)	830, 1205, 1260, 1454, 1566, 1710
BciVI	GTATCC	2 cut(s)	596, 899
BcnI	CCSGG	5 cut(s)	345, 346, 372, 564, 1423
BcoDI	GTCTC	5 cut(s)	525, 551, 630, 1281, 1523
BfaI	CTAG	2 cut(s)	807, 1127
BfuAI	ACCTGC	2 cut(s)	857, 992
BfuI	GTATCC	2 cut(s)	596, 899
BmcAI	AGTACT	1 cut(s)	42
Bme18I	GGWCC	6 cut(s)	211, 348, 507, 1175, 1310, 1613
BmeRI	GACNNNNNGTC	1 cut(s)	1536
BmeT110I	CYCGRG	2 cut(s)	344, 535
BmgBI	CACGTC	1 cut(s)	1741
BmgT120I	GGNCC	7 cut(s)	211, 341, 348, 507, 1175, 1310, 1613
BmiI	GGNNCC	5 cut(s)	157, 343, 349, 509, 1312
BmsI	GCATC	3 cut(s)	187, 1110, 1480
BpiI	GAAGAC	2 cut(s)	576, 608
BpmI	CTGGAG	2 cut(s)	1242, 1659
Bpu10I	CCTNAGC	1 cut(s)	390
Bpu14I	TTCGAA	1 cut(s)	359
BpuEI	CTTGAG	1 cut(s)	1232
BpuMI	CCSGG	5 cut(s)	345, 346, 372, 564, 1423
BsaAI	YACGTR	1 cut(s)	1217
BsaBI	GATNNNNATC	1 cut(s)	1143
BsaI	GGTCTC	1 cut(s)	525
BsaJI	CCNNGG	8 cut(s)	343, 344, 370, 883, 987, 1296, 1452, 1708
BsaXI	ACNNNNNCTCC	2 cut(s)	1053, 1083
Bsc4I	CCNNNNNNNGG	6 cut(s)	201, 444, 541, 542, 1210, 1385
Bse1I	ACTGG	1 cut(s)	133
Bse3DI	GCAATG	5 cut(s)	230, 477, 575, 1327, 1731
Bse8I	GATNNNNATC	1 cut(s)	1143
BseBI	CCWGG	6 cut(s)	830, 1205, 1260, 1454, 1566, 1710
BseDI	CCNNGG	8 cut(s)	343, 344, 370, 883, 987, 1296, 1452, 1708
BseGI	GGATG	2 cut(s)	760, 1189
BseJI	GATNNNNATC	1 cut(s)	1143
BseLI	CCNNNNNNNGG	6 cut(s)	201, 444, 541, 542, 1210, 1385
BseMI	GCAATG	5 cut(s)	230, 477, 575, 1327, 1731
BseMII	CTCAG	4 cut(s)	135, 404, 450, 1065
BseNI	ACTGG	1 cut(s)	133
BseRI	GAGGAG	1 cut(s)	1656
BseSI	GKGCMC	1 cut(s)	1193
BseX3I	CGGCCG	1 cut(s)	192
BseXI	GCAGC	8 cut(s)	419, 671, 992, 995, 1091, 1490, 1496, 1714
BsgI	GTGCAG	1 cut(s)	285
Bsh1236I	CGCG	1 cut(s)	202
Bsh1285I	CGRYCG	1 cut(s)	195
BsiEI	CGRYCG	1 cut(s)	195
BsiHKAI	GWGCWC	2 cut(s)	122, 1193
BsiHKCI	CYCGRG	2 cut(s)	344, 535
BsiSI	CCGG	5 cut(s)	129, 345, 372, 563, 1422
BsiWI	CGTACG	1 cut(s)	333
BslFI	GGGAC	4 cut(s)	353, 361, 493, 1296
BslI	CCNNNNNNNGG	6 cut(s)	201, 444, 541, 542, 1210, 1385
BsmAI	GTCTC	5 cut(s)	525, 551, 630, 1281, 1523
BsmFI	GGGAC	4 cut(s)	353, 361, 493, 1296
BsmI	GAATGC	1 cut(s)	1689
Bso31I	GGTCTC	1 cut(s)	525
BsoBI	CYCGRG	2 cut(s)	344, 535
Bsp119I	TTCGAA	1 cut(s)	359
Bsp1286I	GDGCHC	2 cut(s)	122, 1193
Bsp1407I	TGTACA	1 cut(s)	474
Bsp143I	GATC	5 cut(s)	596, 1009, 1022, 1144, 1262
BspACI	CCGC	8 cut(s)	147, 153, 191, 202, 209, 405, 633, 1482
BspCNI	CTCAG	4 cut(s)	134, 403, 451, 1066
BspFNI	CGCG	1 cut(s)	202
BspLI	GGNNCC	5 cut(s)	157, 343, 349, 509, 1312
BspMI	ACCTGC	2 cut(s)	857, 992
BspPI	GGATC	5 cut(s)	604, 1017, 1030, 1139, 1270
BspT104I	TTCGAA	1 cut(s)	359
BspTNI	GGTCTC	1 cut(s)	525
BsrDI	GCAATG	5 cut(s)	230, 477, 575, 1327, 1731
BsrGI	TGTACA	1 cut(s)	474
BsrI	ACTGG	1 cut(s)	133
BssECI	CCNNGG	8 cut(s)	343, 344, 370, 883, 987, 1296, 1452, 1708
BssMI	GATC	5 cut(s)	596, 1009, 1022, 1144, 1262
BssSI	CACGAG	2 cut(s)	215, 583
BssT1I	CCWWGG	2 cut(s)	987, 1296
Bst2BI	CACGAG	2 cut(s)	215, 583
Bst2UI	CCWGG	6 cut(s)	830, 1205, 1260, 1454, 1566, 1710
Bst4CI	ACNGT	5 cut(s)	263, 326, 1019, 1038, 1498
Bst6I	CTCTTC	4 cut(s)	215, 541, 969, 1584
BstAPI	GCANNNNNTGC	2 cut(s)	1362, 1490
BstAUI	TGTACA	1 cut(s)	474
BstBAI	YACGTR	1 cut(s)	1217
BstBI	TTCGAA	1 cut(s)	359
BstC8I	GCNNGC	4 cut(s)	145, 281, 1154, 1212
BstDEI	CTNAG	5 cut(s)	121, 390, 459, 1030, 1074
BstEII	GGTNACC	1 cut(s)	1703
BstENI	CCTNNNNNAGG	1 cut(s)	1383
BstF5I	GGATG	2 cut(s)	760, 1189
BstFNI	CGCG	1 cut(s)	202
BstHHI	GCGC	3 cut(s)	202, 854, 1430
BstKTI	GATC	5 cut(s)	599, 1012, 1025, 1147, 1265
BstMAI	GTCTC	5 cut(s)	525, 551, 630, 1281, 1523
BstMBI	GATC	5 cut(s)	596, 1009, 1022, 1144, 1262
BstMCI	CGRYCG	1 cut(s)	195
BstNI	CCWGG	6 cut(s)	830, 1205, 1260, 1454, 1566, 1710
BstNSI	RCATGY	1 cut(s)	666
BstPI	GGTNACC	1 cut(s)	1703
BstSLI	GKGCMC	1 cut(s)	1193
BstUI	CGCG	1 cut(s)	202
BstV1I	GCAGC	8 cut(s)	419, 671, 992, 995, 1091, 1490, 1496, 1714
BstV2I	GAAGAC	2 cut(s)	576, 608
BstX2I	RGATCY	1 cut(s)	1009
BstXI	CCANNNNNNTGG	2 cut(s)	836, 1460
BstYI	RGATCY	1 cut(s)	1009
BstZI	CGGCCG	1 cut(s)	192
BsuI	GTATCC	2 cut(s)	596, 899
BtrI	CACGTC	1 cut(s)	1741
BtsCI	GGATG	2 cut(s)	760, 1189
BtsI	GCAGTG	5 cut(s)	63, 738, 1059, 1265, 1446
BtsIMutI	CAGTG	7 cut(s)	63, 268, 738, 915, 1059, 1265, 1446
BveI	ACCTGC	2 cut(s)	857, 992
Cac8I	GCNNGC	4 cut(s)	145, 281, 1154, 1212
CaiI	CAGNNNCTG	1 cut(s)	1210
CfoI	GCGC	3 cut(s)	202, 854, 1430
Cfr13I	GGNCC	7 cut(s)	211, 341, 348, 507, 1175, 1310, 1613
Cfr9I	CCCGGG	1 cut(s)	344
CseI	GACGC	2 cut(s)	399, 1112
CsiI	ACCWGGT	1 cut(s)	828
Csp6I	GTAC	7 cut(s)	41, 298, 334, 475, 940, 1039, 1499
CspCI	CAANNNNNGTGG	4 cut(s)	1396, 1398, 1431, 1433
CviAII	CATG	3 cut(s)	663, 751, 814
CviQI	GTAC	7 cut(s)	41, 298, 334, 475, 940, 1039, 1499
DdeI	CTNAG	5 cut(s)	121, 390, 459, 1030, 1074
DpnI	GATC	5 cut(s)	598, 1011, 1024, 1146, 1264
DpnII	GATC	5 cut(s)	596, 1009, 1022, 1144, 1262
DraIII	CACNNNGTG	1 cut(s)	328
DrdI	GACNNNNNNGTC	3 cut(s)	409, 505, 1173
DriI	GACNNNNNGTC	1 cut(s)	1536
DseDI	GACNNNNNNGTC	3 cut(s)	409, 505, 1173
EaeI	YGGCCR	3 cut(s)	130, 192, 1419
EagI	CGGCCG	1 cut(s)	192
Eam1104I	CTCTTC	4 cut(s)	215, 541, 969, 1584
Eam1105I	GACNNNNNGTC	1 cut(s)	1536
EarI	CTCTTC	4 cut(s)	215, 541, 969, 1584
EciI	GGCGGA	1 cut(s)	224
Ecl136II	GAGCTC	1 cut(s)	120
EclXI	CGGCCG	1 cut(s)	192
Eco130I	CCWWGG	2 cut(s)	987, 1296
Eco147I	AGGCCT	2 cut(s)	68, 1389
Eco24I	GRGCYC	1 cut(s)	122
Eco31I	GGTCTC	1 cut(s)	525
Eco47I	GGWCC	6 cut(s)	211, 348, 507, 1175, 1310, 1613
Eco52I	CGGCCG	1 cut(s)	192
Eco53kI	GAGCTC	1 cut(s)	120
Eco57I	CTGAAG	1 cut(s)	1611
Eco72I	CACGTG	1 cut(s)	1217
Eco88I	CYCGRG	2 cut(s)	344, 535
Eco91I	GGTNACC	1 cut(s)	1703
EcoICRI	GAGCTC	1 cut(s)	120
EcoNI	CCTNNNNNAGG	1 cut(s)	1383
EcoO109I	RGGNCCY	2 cut(s)	1310, 1613
EcoO65I	GGTNACC	1 cut(s)	1703
EcoRI	GAATTC	1 cut(s)	288
EcoRII	CCWGG	6 cut(s)	828, 1203, 1258, 1452, 1564, 1708
EcoT14I	CCWWGG	2 cut(s)	987, 1296
EcoT38I	GRGCYC	1 cut(s)	122
ErhI	CCWWGG	2 cut(s)	987, 1296
FaeI	CATG	3 cut(s)	666, 754, 817
FalI	AAGNNNNNCTT	2 cut(s)	1050, 1082
FaqI	GGGAC	4 cut(s)	353, 361, 493, 1296
FatI	CATG	3 cut(s)	662, 750, 813
FauI	CCCGC	1 cut(s)	195
FauNDI	CATATG	1 cut(s)	1162
FokI	GGATG	2 cut(s)	767, 1196
FriOI	GRGCYC	1 cut(s)	122
FspBI	CTAG	2 cut(s)	807, 1127
FspI	TGCGCA	1 cut(s)	853
GlaI	GCGC	3 cut(s)	201, 853, 1429
GsuI	CTGGAG	2 cut(s)	1242, 1659
HapII	CCGG	5 cut(s)	129, 345, 372, 563, 1422
HgaI	GACGC	2 cut(s)	399, 1112
HhaI	GCGC	3 cut(s)	202, 854, 1430
Hin1II	CATG	3 cut(s)	666, 754, 817
Hin6I	GCGC	3 cut(s)	200, 852, 1428
HinP1I	GCGC	3 cut(s)	200, 852, 1428
HincII	GTYRAC	1 cut(s)	456
HindII	GTYRAC	1 cut(s)	456
HinfI	GANTC	3 cut(s)	559, 926, 1548
HpaII	CCGG	5 cut(s)	129, 345, 372, 563, 1422
HphI	GGTGA	3 cut(s)	268, 1154, 1523
Hpy166II	GTNNAC	6 cut(s)	259, 456, 671, 940, 1041, 1191
Hpy188I	TCNGA	5 cut(s)	33, 313, 443, 530, 884
Hpy188III	TCNNGA	7 cut(s)	217, 583, 600, 791, 1249, 1541, 1638
Hpy8I	GTNNAC	6 cut(s)	259, 456, 671, 940, 1041, 1191
Hpy99I	CGWCG	2 cut(s)	341, 415
HpyAV	CCTTC	6 cut(s)	58, 438, 875, 1040, 1346, 1594
HpyCH4III	ACNGT	5 cut(s)	263, 326, 1019, 1038, 1498
HpyCH4IV	ACGT	5 cut(s)	248, 336, 606, 1216, 1740
HpyCH4V	TGCA	8 cut(s)	235, 266, 659, 731, 1191, 1365, 1384, 1493
HpyF3I	CTNAG	5 cut(s)	121, 390, 459, 1030, 1074
HpySE526I	ACGT	5 cut(s)	248, 336, 606, 1216, 1740
Hsp92II	CATG	3 cut(s)	666, 754, 817
HspAI	GCGC	3 cut(s)	200, 852, 1428
Kzo9I	GATC	5 cut(s)	596, 1009, 1022, 1144, 1262
LmnI	GCTCC	4 cut(s)	374, 1049, 1207, 1724
Lsp1109I	GCAGC	8 cut(s)	419, 671, 992, 995, 1091, 1490, 1496, 1714
LweI	GCATC	3 cut(s)	187, 1110, 1480
MabI	ACCWGGT	1 cut(s)	828
MaeI	CTAG	2 cut(s)	807, 1127
MaeII	ACGT	5 cut(s)	248, 336, 606, 1216, 1740
MaeIII	GTNAC	8 cut(s)	89, 587, 736, 913, 1069, 1324, 1538, 1703
MalI	GATC	5 cut(s)	598, 1011, 1024, 1146, 1264
MboI	GATC	5 cut(s)	596, 1009, 1022, 1144, 1262
MboII	GAAGA	9 cut(s)	232, 253, 558, 581, 608, 986, 1126, 1553, 1571
MfeI	CAATTG	2 cut(s)	697, 1524
MflI	RGATCY	1 cut(s)	1009
MhlI	GDGCHC	2 cut(s)	122, 1193
MluCI	AATT	5 cut(s)	288, 697, 1105, 1524, 1680
MlyI	GAGTC	1 cut(s)	553
MmeI	TCCRAC	2 cut(s)	183, 291
MseI	TTAA	3 cut(s)	519, 651, 834
MslI	CAYNNNNRTG	3 cut(s)	98, 726, 1118
MspI	CCGG	5 cut(s)	129, 345, 372, 563, 1422
MunI	CAATTG	2 cut(s)	697, 1524
Mva1269I	GAATGC	1 cut(s)	1689
MvaI	CCWGG	6 cut(s)	830, 1205, 1260, 1454, 1566, 1710
MvnI	CGCG	1 cut(s)	202
NciI	CCSGG	5 cut(s)	345, 346, 372, 564, 1423
NdeI	CATATG	1 cut(s)	1162
NdeII	GATC	5 cut(s)	596, 1009, 1022, 1144, 1262
NlaIII	CATG	3 cut(s)	666, 754, 817
NlaIV	GGNNCC	5 cut(s)	157, 343, 349, 509, 1312
NmuCI	GTSAC	3 cut(s)	913, 1324, 1538
NsbI	TGCGCA	1 cut(s)	853
NspI	RCATGY	1 cut(s)	666
NspV	TTCGAA	1 cut(s)	359
PceI	AGGCCT	2 cut(s)	68, 1389
PcsI	WCGNNNNNNNCGW	1 cut(s)	1548
PctI	GAATGC	1 cut(s)	1689
PfeI	GAWTC	2 cut(s)	926, 1548
Pfl23II	CGTACG	1 cut(s)	333
PflMI	CCANNNNNTGG	1 cut(s)	1210
PfoI	TCCNGGA	3 cut(s)	562, 1258, 1564
PleI	GAGTC	1 cut(s)	553
PmaCI	CACGTG	1 cut(s)	1217
PmlI	CACGTG	1 cut(s)	1217
PpsI	GAGTC	1 cut(s)	553
Ppu21I	YACGTR	1 cut(s)	1217
PpuMI	RGGWCCY	2 cut(s)	1310, 1613
PsiI	TTATAA	1 cut(s)	1758
Psp124BI	GAGCTC	1 cut(s)	122
Psp5II	RGGWCCY	2 cut(s)	1310, 1613
Psp6I	CCWGG	6 cut(s)	828, 1203, 1258, 1452, 1564, 1708
PspCI	CACGTG	1 cut(s)	1217
PspEI	GGTNACC	1 cut(s)	1703
PspGI	CCWGG	6 cut(s)	828, 1203, 1258, 1452, 1564, 1708
PspLI	CGTACG	1 cut(s)	333
PspN4I	GGNNCC	5 cut(s)	157, 343, 349, 509, 1312
PspPI	GGNCC	7 cut(s)	211, 341, 348, 507, 1175, 1310, 1613
PspPPI	RGGWCCY	2 cut(s)	1310, 1613
PsrI	GAACNNNNNNTAC	2 cut(s)	941, 973
PstNI	CAGNNNCTG	1 cut(s)	1210
PsuI	RGATCY	1 cut(s)	1009
RsaI	GTAC	7 cut(s)	42, 299, 335, 476, 941, 1040, 1500
RsaNI	GTAC	7 cut(s)	41, 298, 334, 475, 940, 1039, 1499
RseI	CAYNNNNRTG	3 cut(s)	98, 726, 1118
SacI	GAGCTC	1 cut(s)	122
SaqAI	TTAA	3 cut(s)	519, 651, 834
Sau3AI	GATC	5 cut(s)	596, 1009, 1022, 1144, 1262
Sau96I	GGNCC	7 cut(s)	211, 341, 348, 507, 1175, 1310, 1613
ScaI	AGTACT	1 cut(s)	42
SchI	GAGTC	1 cut(s)	553
SduI	GDGCHC	2 cut(s)	122, 1193
SexAI	ACCWGGT	1 cut(s)	828
SfaNI	GCATC	3 cut(s)	187, 1110, 1480
SfuI	TTCGAA	1 cut(s)	359
SinI	GGWCC	6 cut(s)	211, 348, 507, 1175, 1310, 1613
SmaI	CCCGGG	1 cut(s)	346
SmiMI	CAYNNNNRTG	3 cut(s)	98, 726, 1118
SmlI	CTYRAG	1 cut(s)	1247
SmoI	CTYRAG	1 cut(s)	1247
Sse9I	AATT	5 cut(s)	288, 697, 1105, 1524, 1680
SseBI	AGGCCT	2 cut(s)	68, 1389
SsiI	CCGC	8 cut(s)	147, 153, 191, 202, 209, 405, 633, 1482
SspMI	CTAG	2 cut(s)	807, 1127
SstI	GAGCTC	1 cut(s)	122
StuI	AGGCCT	2 cut(s)	68, 1389
StyI	CCWWGG	2 cut(s)	987, 1296
TaaI	ACNGT	5 cut(s)	263, 326, 1019, 1038, 1498
TaiI	ACGT	5 cut(s)	251, 339, 609, 1219, 1743
TaqI	TCGA	4 cut(s)	359, 1137, 1551, 1650
TaqII	GACCGA	1 cut(s)	1163
TasI	AATT	5 cut(s)	288, 697, 1105, 1524, 1680
TatI	WGTACW	5 cut(s)	40, 474, 939, 1038, 1498
TauI	GCSGC	2 cut(s)	194, 1484
TfiI	GAWTC	2 cut(s)	926, 1548
Tru1I	TTAA	3 cut(s)	519, 651, 834
Tru9I	TTAA	3 cut(s)	519, 651, 834
TscAI	CASTG	7 cut(s)	63, 268, 738, 922, 1059, 1272, 1453
TseFI	GTSAC	3 cut(s)	913, 1324, 1538
TseI	GCWGC	8 cut(s)	407, 659, 980, 983, 1079, 1478, 1484, 1727
Tsp45I	GTSAC	3 cut(s)	913, 1324, 1538
TspGWI	ACGGA	1 cut(s)	609
TspMI	CCCGGG	1 cut(s)	344
TspRI	CASTG	7 cut(s)	63, 268, 738, 922, 1059, 1272, 1453
Van91I	CCANNNNNTGG	1 cut(s)	1210
VneI	GTGCAC	1 cut(s)	1189
VpaK11BI	GGWCC	6 cut(s)	211, 348, 507, 1175, 1310, 1613
XagI	CCTNNNNNAGG	1 cut(s)	1383
XapI	RAATTY	1 cut(s)	288
XceI	RCATGY	1 cut(s)	666
XcmI	CCANNNNNNNNNTGG	3 cut(s)	445, 1294, 1414
XmaI	CCCGGG	1 cut(s)	344
XspI	CTAG	2 cut(s)	807, 1127
ZrmI	AGTACT	1 cut(s)	42

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.