Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0003333

Physical Location & Seq

Genomic Coordinates Reverse (-)

45678241 .. 45682320

Gene Structure 4080 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G031760.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2307 bp

ATGGCCTCCTTTTTTTTCTTTTCCTCTGTTCAGAACAGAGTACTTCAAAACAGAGCAGTGCCGAAGGCCTTGCTCTGTTTTACTCTCTGTTACATACTGATGTTATCTTTCTGTATGAGCTCAGTTTCCGGCCAGTCATTTGCCTGCGGTGGTGGTTCCAGCAGCTTCCCGTTCTGCGACAAGTCGTTGGCGGCCGATGCGCGGGTGGCGGACCTCGTGAAGAGGCTGACATTGCAGGAGAAGATTACGTTTCTGGTGAACAGTGCAGGCAGTGTGAGCAGGCTTGGAATACCCAAGTACGAGTGGTGGTCGGAGGCTTTACACGGTGTGTCGTACGTCGGCCCCGGAACCAGGTTTTCGAATGTCGTCCCCGGAGCTACCAGCTTCCCTCAGCCCATTTTGACCGCAGCGTCGTTCAACAACTCTCTCTACGAAGCCATCGGAAGGGTGGTGTCAACTGAGGCCAGAGCAATGTACAATGTGGGATTGGCAGGATTGACATTCTGGTCCCCAAACATTAACATTTTCCGAGACCCGAGATGGGGAAGAGGCCAAGAGACTCCGGGAGAAGACCCATTGCTCACGAGTAACTACGGATCAGGATACGTTAGAGGTCTTCAACAAACCGATAGCGGAGACAAAAATAGGCTTAAAGTTGCAGCATGTTGTAAACATTATACAGCCTATGATTTGGACAATTGGAAAGGAACTGACAGATACCATTTCAATGCAGTGGTAACAAAACAAGACATGGATGATACATTTCAGCCACCATTCAAAAGTTGTGTTCTTGATGGGAATGTTGCTAGTGTCATGTGTTCTTACAACCAGGTTAATGGAATACCAACCTGCGCAGACCCAAACCTTCTCTCTGGGGTTATCCGAGGCGAATGGAAGTTGAATGGATACATAGTGACTGATTGTGATTCAATAGATGTGTACTACAAGAACCAACACTACACCAAGACACCAGAAGAGGCTGCAGCTAAGGCTATATTAGCAGGTTTGGATCTAAACTGTGGATCATTCTTAGGACAGTACACAGAAGGAGCAGTGAAAGGAGGACTTGTGACTGAGGCAGCCATTGACAAGGCCATCACAAACAATTTTGGCACATTGATGCGTCTAGGCTTCTTCGATGGTGATCCAAGCAAGCAACCATATGGACATCTCGGTCCAAAGGATGTGTGCACTCCACAGAACCAGGAGCTGGCACGTGAAACAGCGAGACAAGGGATAGTGTTGCTCAAGAACACTCCAGGATCACTGCCTCTGTCTCCCACAGCCATCAAATCCTTGGCAGTTATAGGTCCCAATGGCAATGTCACAAAGACTATGATTGGAAATTACGAAGGCACCCCTTGCAAATATACAACTCCTTTGCAAGGCCTAACAGCCGTAGTTCCCAACAACATTTGTGGCCGGGTAGATGATGCTACCAAGTTAGCAGCCGCAGCAGATGCAACTGTACTTATAGTGGGTGAAAATCAATCAATTGAGACTGAAAGTCATGATAGAATTGACCTCCATCTTCCAGGACAGCAAACTCTTCTAATAACTGAAGTAGCGAAGGCTTCTAAAGGACCTGTTATCCTTGTCATAATGTCTGGAGGAGGGTTCGATATTACCTTTGCGAAAAATGATGATAAAATTACAAGCATTCTATGGGTTGGTTACCCTGGCGAAGCTGGTGGAGCTGCCATTGCTGACGTGATTTTTGGCTTTTATAATCCAAGTGGAAGACTACCTATGACGTGGTATCCTCAAGCATATGTAGACAAGGTCCCTATGACAAACATGAATATGAGACCAGATCCTGCAAGTGGTTACCCGGGCAGGACTTACCGGTTTTACACTGGTGACACGGTTTATGAATTTGGATACGGAATAAGCTACTCCACCTTCAATCACCGCCTAGTTCGAGCACCGAAGCAAGTTTCCATTCCCTTAGAGGAGGATCATGTATGCCACTCATCAAGTTGCCAATCACTTGATGTTGTAGAAGAAAGGTGTCAAAATCTAGCTTTCGATATCCATTTGGGGGTGAAAAACATGGGCAAAATGAGTGGAAGTCATACAGTCTTATTGTATTCGAGTCCTCCATCTGTGCACAATTCTCCTAAAAAGCACTTGTTGGGATTTGAGAAGGTGTTCCTTAGCTCTCAGGGAGAAGCATTGGTCAAGTTCAATGTGGATGTTTGCAAGCACTTGAGTGTGGTTGATGAGCTAGGAAGTAGAAAAGTTGCTTTGGGAGATCATGTACTACATGTGGGAGACTTGAAACAGACATTGAGTGTGAGGATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0002376 GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005576 GO:0005618 GO:0005623 GO:0005975 GO:0005976 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009044 GO:0009056 GO:0009057 GO:0009605 GO:0009607 GO:0009627 GO:0009814 GO:0009987 GO:0010383 GO:0010410 GO:0016052 GO:0016787 GO:0016798 GO:0030312 GO:0031221 GO:0031222 GO:0043170 GO:0043207 GO:0044036 GO:0044237 GO:0044238 GO:0044260 GO:0044464 GO:0045087 GO:0045491 GO:0045493 GO:0046556 GO:0048046 GO:0050896 GO:0051704 GO:0051707 GO:0071554 GO:0071704 GO:0071944 GO:0097599 GO:0098542 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00520 ko01100 map00520 map01100

Pfam Domains

Protein Families

Fn3-like Glyco_hydro_3 Glyco_hydro_3_C

Protein Analysis

768

Amino Acids

83.41

Weight (kDa)

6.78

Isoelectric Point (pI)

34.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_3	PF00933	123 - 366	6.1e-34	Glycosyl hydrolase family 3 N terminal domain
Glyco_hydro_3_C	PF01915	413 - 632	3.1e-50	Glycosyl hydrolase family 3 C-terminal domain
Fn3-like	PF14310	692 - 759	7.3e-10	Fibronectin type III-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003333)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G09730 AT5G64570 AT5G64570 AT5G64570
fragaria_vesca	FvH4_5g30690 FvH4_5g30710 FvH4_5g30710 FvH4_5g30710 FvH4_5g30710
malus_domestica	MD08G1221800.v1.1 MD15G1414100.v1.1
prunus_persica	Prupe.1G559400_v2.0.a1 Prupe.1G559400_v2.0.a1
pyrus_communis	pycom08g19240 pycom15g36840
rosa_chinensis	RchiOBHm_Chr7g0225551 RchiOBHm_Chr7g0225581
rosa_laevigata	RLG00000001804 RLG00000001806
rosa_multiflora	Rmu_co8377913.1_g000001 Rmu_sc0003876.1_g000021 Rmu_sc0006321.1_g000006
rosa_roxburghii	Rroxscaffold_3G00233670 Rroxscaffold_3G00233690
rosa_rugosa	Rorug07G0231600 Rorug07G0231800
rosa_samantha	Rh7AG372300 Rh7AG372500 Rh7BG365400 Rh7BG365500 Rh7CG390600 Rh7CG390800 Rh7DG376200 Rh7DG376300
rosa_wichuraiana	Rw7G031750 Rw7G031760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1728
AasI	GACNNNNNNGTC	3 cut(s)	409, 505, 1173
Acc16I	TGCGCA	1 cut(s)	853
Acc36I	ACCTGC	2 cut(s)	857, 992
AccB1I	GGYRCC	1 cut(s)	1355
AccB7I	CCANNNNNTGG	1 cut(s)	1210
AccI	GTMKAC	1 cut(s)	1776
AccII	CGCG	1 cut(s)	202
AciI	CCGC	8 cut(s)	147, 191, 202, 209, 405, 633, 1452, 1912
AclWI	GGATC	7 cut(s)	604, 1017, 1030, 1139, 1270, 1808, 1965
AcoI	YGGCCR	3 cut(s)	130, 192, 1420
AcsI	RAATTY	1 cut(s)	1874
AcuI	CTGAAG	1 cut(s)	1581
AcvI	CACGTG	1 cut(s)	1217
AdeI	CACNNNGTG	1 cut(s)	328
AfaI	GTAC	8 cut(s)	42, 299, 335, 476, 941, 1040, 1470, 2262
AfiI	CCNNNNNNNGG	9 cut(s)	201, 351, 444, 541, 542, 1210, 1385, 1823, 2041
AflIII	ACRYGT	1 cut(s)	2266
AgeI	ACCGGT	1 cut(s)	1845
AhdI	GACNNNNNGTC	1 cut(s)	1506
AjiI	CACGTC	2 cut(s)	1711, 1755
AjnI	CCWGG	6 cut(s)	350, 828, 1203, 1258, 1534, 1678
AleI	CACNNNNGTG	1 cut(s)	2211
Alw21I	GWGCWC	4 cut(s)	122, 1193, 1927, 2112
Alw26I	GTCTC	8 cut(s)	525, 551, 630, 1222, 1281, 1493, 1801, 2268
Alw44I	GTGCAC	2 cut(s)	1189, 2108
AlwI	GGATC	7 cut(s)	604, 1017, 1030, 1139, 1270, 1808, 1965
AlwNI	CAGNNNCTG	2 cut(s)	1210, 1817
Ama87I	CYCGRG	2 cut(s)	535, 1831
ApaLI	GTGCAC	2 cut(s)	1189, 2108
ApeKI	GCWGC	9 cut(s)	162, 407, 659, 980, 983, 1079, 1448, 1454, 1697
ApoI	RAATTY	1 cut(s)	1874
ArsI	GACNNNNNNTTYG	2 cut(s)	1700, 1732
AsiGI	ACCGGT	1 cut(s)	1845
Asp700I	GAANNNNTTC	1 cut(s)	2150
AspLEI	GCGC	2 cut(s)	202, 854
AspS9I	GGNCC	7 cut(s)	211, 341, 507, 1175, 1310, 1583, 1783
AsuC2I	CCSGG	6 cut(s)	345, 372, 564, 1424, 1832, 1833
AsuHPI	GGTGA	6 cut(s)	268, 1154, 1493, 1871, 1901, 2056
AsuII	TTCGAA	1 cut(s)	359
AvaI	CYCGRG	2 cut(s)	535, 1831
AvaII	GGWCC	6 cut(s)	211, 507, 1175, 1310, 1583, 1783
BaeGI	GKGCMC	2 cut(s)	1193, 2112
BanI	GGYRCC	1 cut(s)	1355
BanII	GRGCYC	1 cut(s)	122
BauI	CACGAG	2 cut(s)	215, 583
BbrPI	CACGTG	1 cut(s)	1217
BbsI	GAAGAC	3 cut(s)	576, 608, 1747
Bbv12I	GWGCWC	4 cut(s)	122, 1193, 1927, 2112
BbvCI	CCTCAGC	1 cut(s)	390
BbvI	GCAGC	9 cut(s)	174, 419, 671, 967, 995, 1091, 1460, 1466, 1684
BccI	CCATC	8 cut(s)	446, 534, 788, 1103, 1133, 1295, 1536, 2110
BceAI	ACGGC	1 cut(s)	1382
BcgI	CGANNNNNNTGC	2 cut(s)	52, 86
BciT130I	CCWGG	6 cut(s)	352, 830, 1205, 1260, 1536, 1680
BciVI	GTATCC	4 cut(s)	596, 899, 1770, 1874
BcnI	CCSGG	6 cut(s)	345, 372, 564, 1424, 1832, 1833
BcoDI	GTCTC	8 cut(s)	525, 551, 630, 1222, 1281, 1493, 1801, 2268
BfaI	CTAG	5 cut(s)	807, 1127, 1916, 2021, 2228
BfmI	CTRYAG	1 cut(s)	981
BfuAI	ACCTGC	2 cut(s)	857, 992
BfuI	GTATCC	4 cut(s)	596, 899, 1770, 1874
BmcAI	AGTACT	1 cut(s)	42
Bme18I	GGWCC	6 cut(s)	211, 507, 1175, 1310, 1583, 1783
BmeRI	GACNNNNNGTC	1 cut(s)	1506
BmeT110I	CYCGRG	2 cut(s)	535, 1831
BmgBI	CACGTC	2 cut(s)	1711, 1755
BmgT120I	GGNCC	7 cut(s)	211, 341, 507, 1175, 1310, 1583, 1783
BmiI	GGNNCC	7 cut(s)	157, 343, 349, 509, 1312, 1357, 1785
BmsI	GCATC	4 cut(s)	187, 1110, 1423, 1450
BpiI	GAAGAC	3 cut(s)	576, 608, 1747
BpmI	CTGGAG	2 cut(s)	1242, 1629
Bpu10I	CCTNAGC	3 cut(s)	390, 987, 2156
Bpu14I	TTCGAA	1 cut(s)	359
BpuEI	CTTGAG	3 cut(s)	1232, 1749, 2230
BpuMI	CCSGG	6 cut(s)	345, 372, 564, 1424, 1832, 1833
BsaAI	YACGTR	1 cut(s)	1217
BsaBI	GATNNNNATC	1 cut(s)	1143
BsaI	GGTCTC	2 cut(s)	525, 1801
BsaJI	CCNNGG	6 cut(s)	343, 370, 883, 1296, 1678, 1831
BsaWI	WCCGGW	1 cut(s)	1845
BsaXI	ACNNNNNCTCC	4 cut(s)	1053, 1083, 2244, 2274
Bsc4I	CCNNNNNNNGG	9 cut(s)	201, 351, 444, 541, 542, 1210, 1385, 1823, 2041
Bse118I	RCCGGY	1 cut(s)	1845
Bse1I	ACTGG	2 cut(s)	133, 1861
Bse3DI	GCAATG	5 cut(s)	230, 477, 575, 1327, 1701
Bse8I	GATNNNNATC	1 cut(s)	1143
BseBI	CCWGG	6 cut(s)	352, 830, 1205, 1260, 1536, 1680
BseDI	CCNNGG	6 cut(s)	343, 370, 883, 1296, 1678, 1831
BseGI	GGATG	3 cut(s)	760, 1189, 2200
BseJI	GATNNNNATC	1 cut(s)	1143
BseLI	CCNNNNNNNGG	9 cut(s)	201, 351, 444, 541, 542, 1210, 1385, 1823, 2041
BseMI	GCAATG	5 cut(s)	230, 477, 575, 1327, 1701
BseMII	CTCAG	5 cut(s)	135, 404, 450, 1065, 2177
BseNI	ACTGG	2 cut(s)	133, 1861
BseRI	GAGGAG	2 cut(s)	1626, 1967
BseSI	GKGCMC	2 cut(s)	1193, 2112
BseX3I	CGGCCG	1 cut(s)	192
BseXI	GCAGC	9 cut(s)	174, 419, 671, 967, 995, 1091, 1460, 1466, 1684
BsgI	GTGCAG	1 cut(s)	285
Bsh1236I	CGCG	1 cut(s)	202
Bsh1285I	CGRYCG	1 cut(s)	195
BshNI	GGYRCC	1 cut(s)	1355
BshTI	ACCGGT	1 cut(s)	1845
BsiEI	CGRYCG	1 cut(s)	195
BsiHKAI	GWGCWC	4 cut(s)	122, 1193, 1927, 2112
BsiHKCI	CYCGRG	2 cut(s)	535, 1831
BsiSI	CCGG	7 cut(s)	129, 345, 372, 563, 1423, 1832, 1846
BsiWI	CGTACG	1 cut(s)	333
BslFI	GGGAC	4 cut(s)	353, 493, 1296, 1769
BslI	CCNNNNNNNGG	9 cut(s)	201, 351, 444, 541, 542, 1210, 1385, 1823, 2041
BsmAI	GTCTC	8 cut(s)	525, 551, 630, 1222, 1281, 1493, 1801, 2268
BsmFI	GGGAC	4 cut(s)	353, 493, 1296, 1769
BsmI	GAATGC	1 cut(s)	1659
Bso31I	GGTCTC	2 cut(s)	525, 1801
BsoBI	CYCGRG	2 cut(s)	535, 1831
Bsp119I	TTCGAA	1 cut(s)	359
Bsp1286I	GDGCHC	4 cut(s)	122, 1193, 1927, 2112
Bsp1407I	TGTACA	1 cut(s)	474
Bsp143I	GATC	8 cut(s)	596, 1009, 1022, 1144, 1262, 1813, 1957, 2254
BspACI	CCGC	8 cut(s)	147, 191, 202, 209, 405, 633, 1452, 1912
BspCNI	CTCAG	5 cut(s)	134, 403, 451, 1066, 2176
BspFNI	CGCG	1 cut(s)	202
BspHI	TCATGA	1 cut(s)	1510
BspLI	GGNNCC	7 cut(s)	157, 343, 349, 509, 1312, 1357, 1785
BspMAI	CTGCAG	1 cut(s)	985
BspMI	ACCTGC	2 cut(s)	857, 992
BspPI	GGATC	7 cut(s)	604, 1017, 1030, 1139, 1270, 1808, 1965
BspT104I	TTCGAA	1 cut(s)	359
BspT107I	GGYRCC	1 cut(s)	1355
BspTNI	GGTCTC	2 cut(s)	525, 1801
BsrDI	GCAATG	5 cut(s)	230, 477, 575, 1327, 1701
BsrFI	RCCGGY	1 cut(s)	1845
BsrGI	TGTACA	1 cut(s)	474
BsrI	ACTGG	2 cut(s)	133, 1861
BssAI	RCCGGY	1 cut(s)	1845
BssECI	CCNNGG	6 cut(s)	343, 370, 883, 1296, 1678, 1831
BssMI	GATC	8 cut(s)	596, 1009, 1022, 1144, 1262, 1813, 1957, 2254
BssSI	CACGAG	2 cut(s)	215, 583
BssT1I	CCWWGG	1 cut(s)	1296
Bst2BI	CACGAG	2 cut(s)	215, 583
Bst2UI	CCWGG	6 cut(s)	352, 830, 1205, 1260, 1536, 1680
Bst4CI	ACNGT	7 cut(s)	263, 326, 1019, 1038, 1468, 1867, 2080
Bst6I	CTCTTC	4 cut(s)	215, 541, 969, 1554
BstAPI	GCANNNNNTGC	2 cut(s)	1362, 1460
BstAUI	TGTACA	1 cut(s)	474
BstBAI	YACGTR	1 cut(s)	1217
BstBI	TTCGAA	1 cut(s)	359
BstC8I	GCNNGC	6 cut(s)	145, 268, 281, 1154, 1212, 2204
BstDEI	CTNAG	9 cut(s)	121, 390, 459, 987, 1030, 1074, 1948, 2156, 2163
BstEII	GGTNACC	2 cut(s)	1673, 1826
BstENI	CCTNNNNNAGG	1 cut(s)	1383
BstF5I	GGATG	3 cut(s)	760, 1189, 2200
BstFNI	CGCG	1 cut(s)	202
BstHHI	GCGC	2 cut(s)	202, 854
BstKTI	GATC	8 cut(s)	599, 1012, 1025, 1147, 1265, 1816, 1960, 2257
BstMAI	GTCTC	8 cut(s)	525, 551, 630, 1222, 1281, 1493, 1801, 2268
BstMBI	GATC	8 cut(s)	596, 1009, 1022, 1144, 1262, 1813, 1957, 2254
BstMCI	CGRYCG	1 cut(s)	195
BstNI	CCWGG	6 cut(s)	352, 830, 1205, 1260, 1536, 1680
BstNSI	RCATGY	2 cut(s)	666, 2270
BstPI	GGTNACC	2 cut(s)	1673, 1826
BstSFI	CTRYAG	1 cut(s)	981
BstSLI	GKGCMC	2 cut(s)	1193, 2112
BstUI	CGCG	1 cut(s)	202
BstV1I	GCAGC	9 cut(s)	174, 419, 671, 967, 995, 1091, 1460, 1466, 1684
BstV2I	GAAGAC	3 cut(s)	576, 608, 1747
BstX2I	RGATCY	2 cut(s)	1009, 1813
BstXI	CCANNNNNNTGG	1 cut(s)	836
BstYI	RGATCY	2 cut(s)	1009, 1813
BstZI	CGGCCG	1 cut(s)	192
BsuI	GTATCC	4 cut(s)	596, 899, 1770, 1874
BtrI	CACGTC	2 cut(s)	1711, 1755
BtsCI	GGATG	3 cut(s)	760, 1189, 2200
BtsI	GCAGTG	5 cut(s)	63, 277, 738, 1059, 1265
BtsIMutI	CAGTG	7 cut(s)	63, 268, 277, 738, 1059, 1265, 1854
BveI	ACCTGC	2 cut(s)	857, 992
Cac8I	GCNNGC	6 cut(s)	145, 268, 281, 1154, 1212, 2204
CaiI	CAGNNNCTG	2 cut(s)	1210, 1817
CciI	TCATGA	1 cut(s)	1510
CfoI	GCGC	2 cut(s)	202, 854
Cfr10I	RCCGGY	1 cut(s)	1845
Cfr13I	GGNCC	7 cut(s)	211, 341, 507, 1175, 1310, 1583, 1783
Cfr9I	CCCGGG	1 cut(s)	1831
CseI	GACGC	2 cut(s)	399, 1112
CsiI	ACCWGGT	2 cut(s)	350, 828
Csp6I	GTAC	8 cut(s)	41, 298, 334, 475, 940, 1039, 1469, 2261
CspAI	ACCGGT	1 cut(s)	1845
CspCI	CAANNNNNGTGG	4 cut(s)	1399, 1434, 2047, 2082
CviAII	CATG	9 cut(s)	663, 751, 814, 1511, 1798, 1961, 2053, 2258, 2267
CviQI	GTAC	8 cut(s)	41, 298, 334, 475, 940, 1039, 1469, 2261
DdeI	CTNAG	9 cut(s)	121, 390, 459, 987, 1030, 1074, 1948, 2156, 2163
DpnI	GATC	8 cut(s)	598, 1011, 1024, 1146, 1264, 1815, 1959, 2256
DpnII	GATC	8 cut(s)	596, 1009, 1022, 1144, 1262, 1813, 1957, 2254
DraIII	CACNNNGTG	1 cut(s)	328
DrdI	GACNNNNNNGTC	3 cut(s)	409, 505, 1173
DriI	GACNNNNNGTC	1 cut(s)	1506
DseDI	GACNNNNNNGTC	3 cut(s)	409, 505, 1173
EaeI	YGGCCR	3 cut(s)	130, 192, 1420
EagI	CGGCCG	1 cut(s)	192
Eam1104I	CTCTTC	4 cut(s)	215, 541, 969, 1554
Eam1105I	GACNNNNNGTC	1 cut(s)	1506
EarI	CTCTTC	4 cut(s)	215, 541, 969, 1554
EciI	GGCGGA	1 cut(s)	224
Ecl136II	GAGCTC	1 cut(s)	120
EclXI	CGGCCG	1 cut(s)	192
Eco130I	CCWWGG	1 cut(s)	1296
Eco147I	AGGCCT	2 cut(s)	68, 1389
Eco24I	GRGCYC	1 cut(s)	122
Eco31I	GGTCTC	2 cut(s)	525, 1801
Eco32I	GATATC	1 cut(s)	2032
Eco47I	GGWCC	6 cut(s)	211, 507, 1175, 1310, 1583, 1783
Eco52I	CGGCCG	1 cut(s)	192
Eco53kI	GAGCTC	1 cut(s)	120
Eco57I	CTGAAG	1 cut(s)	1581
Eco72I	CACGTG	1 cut(s)	1217
Eco88I	CYCGRG	2 cut(s)	535, 1831
Eco91I	GGTNACC	2 cut(s)	1673, 1826
EcoICRI	GAGCTC	1 cut(s)	120
EcoNI	CCTNNNNNAGG	1 cut(s)	1383
EcoO109I	RGGNCCY	3 cut(s)	1310, 1583, 1783
EcoO65I	GGTNACC	2 cut(s)	1673, 1826
EcoRII	CCWGG	6 cut(s)	350, 828, 1203, 1258, 1534, 1678
EcoRV	GATATC	1 cut(s)	2032
EcoT14I	CCWWGG	1 cut(s)	1296
EcoT38I	GRGCYC	1 cut(s)	122
ErhI	CCWWGG	1 cut(s)	1296
FaeI	CATG	9 cut(s)	666, 754, 817, 1514, 1801, 1964, 2056, 2261, 2270
FalI	AAGNNNNNCTT	2 cut(s)	1050, 1082
FaqI	GGGAC	4 cut(s)	353, 493, 1296, 1769
FatI	CATG	9 cut(s)	662, 750, 813, 1510, 1797, 1960, 2052, 2257, 2266
FauI	CCCGC	1 cut(s)	195
FauNDI	CATATG	2 cut(s)	1162, 1771
FblI	GTMKAC	1 cut(s)	1776
FokI	GGATG	3 cut(s)	767, 1196, 2207
FriOI	GRGCYC	1 cut(s)	122
FspBI	CTAG	5 cut(s)	807, 1127, 1916, 2021, 2228
FspI	TGCGCA	1 cut(s)	853
GlaI	GCGC	2 cut(s)	201, 853
GsuI	CTGGAG	2 cut(s)	1242, 1629
HapII	CCGG	7 cut(s)	129, 345, 372, 563, 1423, 1832, 1846
HgaI	GACGC	2 cut(s)	399, 1112
HhaI	GCGC	2 cut(s)	202, 854
Hin1II	CATG	9 cut(s)	666, 754, 817, 1514, 1801, 1964, 2056, 2261, 2270
Hin6I	GCGC	2 cut(s)	200, 852
HinP1I	GCGC	2 cut(s)	200, 852
HincII	GTYRAC	1 cut(s)	456
HindII	GTYRAC	1 cut(s)	456
HinfI	GANTC	3 cut(s)	559, 926, 2095
HpaII	CCGG	7 cut(s)	129, 345, 372, 563, 1423, 1832, 1846
HphI	GGTGA	6 cut(s)	268, 1154, 1493, 1871, 1901, 2056
Hpy166II	GTNNAC	8 cut(s)	259, 456, 671, 940, 1041, 1191, 1777, 2110
Hpy188I	TCNGA	5 cut(s)	33, 313, 443, 530, 884
Hpy188III	TCNNGA	7 cut(s)	217, 583, 600, 791, 1249, 1511, 1608
Hpy8I	GTNNAC	8 cut(s)	259, 456, 671, 940, 1041, 1191, 1777, 2110
Hpy99I	CGWCG	2 cut(s)	341, 415
HpyAV	CCTTC	8 cut(s)	58, 438, 875, 1040, 1346, 1564, 1912, 2140
HpyCH4III	ACNGT	7 cut(s)	263, 326, 1019, 1038, 1468, 1867, 2080
HpyCH4IV	ACGT	6 cut(s)	248, 336, 606, 1216, 1710, 1754
HpyF3I	CTNAG	9 cut(s)	121, 390, 459, 987, 1030, 1074, 1948, 2156, 2163
HpySE526I	ACGT	6 cut(s)	248, 336, 606, 1216, 1710, 1754
Hsp92II	CATG	9 cut(s)	666, 754, 817, 1514, 1801, 1964, 2056, 2261, 2270
HspAI	GCGC	2 cut(s)	200, 852
Kzo9I	GATC	8 cut(s)	596, 1009, 1022, 1144, 1262, 1813, 1957, 2254
LmnI	GCTCC	4 cut(s)	374, 1049, 1207, 1694
Lsp1109I	GCAGC	9 cut(s)	174, 419, 671, 967, 995, 1091, 1460, 1466, 1684
LweI	GCATC	4 cut(s)	187, 1110, 1423, 1450
MabI	ACCWGGT	2 cut(s)	350, 828
MaeI	CTAG	5 cut(s)	807, 1127, 1916, 2021, 2228
MaeII	ACGT	6 cut(s)	248, 336, 606, 1216, 1710, 1754
MaeIII	GTNAC	9 cut(s)	89, 587, 736, 913, 1069, 1324, 1673, 1826, 1859
MalI	GATC	8 cut(s)	598, 1011, 1024, 1146, 1264, 1815, 1959, 2256
MboI	GATC	8 cut(s)	596, 1009, 1022, 1144, 1262, 1813, 1957, 2254
MfeI	CAATTG	2 cut(s)	697, 1494
MflI	RGATCY	2 cut(s)	1009, 1813
MhlI	GDGCHC	4 cut(s)	122, 1193, 1927, 2112
MluCI	AATT	8 cut(s)	697, 1105, 1345, 1494, 1518, 1650, 1874, 2113
MlyI	GAGTC	2 cut(s)	553, 2104
MmeI	TCCRAC	1 cut(s)	291
MroXI	GAANNNNTTC	1 cut(s)	2150
MseI	TTAA	3 cut(s)	519, 651, 834
MslI	CAYNNNNRTG	5 cut(s)	98, 726, 1118, 1802, 2211
MspI	CCGG	7 cut(s)	129, 345, 372, 563, 1423, 1832, 1846
MunI	CAATTG	2 cut(s)	697, 1494
Mva1269I	GAATGC	1 cut(s)	1659
MvaI	CCWGG	6 cut(s)	352, 830, 1205, 1260, 1536, 1680
MvnI	CGCG	1 cut(s)	202
NciI	CCSGG	6 cut(s)	345, 372, 564, 1424, 1832, 1833
NdeI	CATATG	2 cut(s)	1162, 1771
NdeII	GATC	8 cut(s)	596, 1009, 1022, 1144, 1262, 1813, 1957, 2254
NlaIII	CATG	9 cut(s)	666, 754, 817, 1514, 1801, 1964, 2056, 2261, 2270
NlaIV	GGNNCC	7 cut(s)	157, 343, 349, 509, 1312, 1357, 1785
NmuCI	GTSAC	4 cut(s)	913, 1069, 1324, 1859
NsbI	TGCGCA	1 cut(s)	853
NspI	RCATGY	2 cut(s)	666, 2270
NspV	TTCGAA	1 cut(s)	359
OliI	CACNNNNGTG	1 cut(s)	2211
PagI	TCATGA	1 cut(s)	1510
PceI	AGGCCT	2 cut(s)	68, 1389
PciI	ACATGT	1 cut(s)	2266
PctI	GAATGC	1 cut(s)	1659
PdmI	GAANNNNTTC	1 cut(s)	2150
PfeI	GAWTC	1 cut(s)	926
Pfl23II	CGTACG	1 cut(s)	333
PflFI	GACNNNGTC	1 cut(s)	1781
PflMI	CCANNNNNTGG	1 cut(s)	1210
PfoI	TCCNGGA	3 cut(s)	562, 1258, 1534
PinAI	ACCGGT	1 cut(s)	1845
PleI	GAGTC	2 cut(s)	553, 2103
PmaCI	CACGTG	1 cut(s)	1217
PmlI	CACGTG	1 cut(s)	1217
PpsI	GAGTC	2 cut(s)	553, 2103
Ppu21I	YACGTR	1 cut(s)	1217
PpuMI	RGGWCCY	3 cut(s)	1310, 1583, 1783
PscI	ACATGT	1 cut(s)	2266
PsiI	TTATAA	1 cut(s)	1728
Psp124BI	GAGCTC	1 cut(s)	122
Psp5II	RGGWCCY	3 cut(s)	1310, 1583, 1783
Psp6I	CCWGG	6 cut(s)	350, 828, 1203, 1258, 1534, 1678
PspCI	CACGTG	1 cut(s)	1217
PspEI	GGTNACC	2 cut(s)	1673, 1826
PspGI	CCWGG	6 cut(s)	350, 828, 1203, 1258, 1534, 1678
PspLI	CGTACG	1 cut(s)	333
PspN4I	GGNNCC	7 cut(s)	157, 343, 349, 509, 1312, 1357, 1785
PspPI	GGNCC	7 cut(s)	211, 341, 507, 1175, 1310, 1583, 1783
PspPPI	RGGWCCY	3 cut(s)	1310, 1583, 1783
PsrI	GAACNNNNNNTAC	2 cut(s)	941, 973
PstI	CTGCAG	1 cut(s)	985
PstNI	CAGNNNCTG	2 cut(s)	1210, 1817
PsuI	RGATCY	2 cut(s)	1009, 1813
PsyI	GACNNNGTC	1 cut(s)	1781
RsaI	GTAC	8 cut(s)	42, 299, 335, 476, 941, 1040, 1470, 2262
RsaNI	GTAC	8 cut(s)	41, 298, 334, 475, 940, 1039, 1469, 2261
RseI	CAYNNNNRTG	5 cut(s)	98, 726, 1118, 1802, 2211
SacI	GAGCTC	1 cut(s)	122
SaqAI	TTAA	3 cut(s)	519, 651, 834
Sau3AI	GATC	8 cut(s)	596, 1009, 1022, 1144, 1262, 1813, 1957, 2254
Sau96I	GGNCC	7 cut(s)	211, 341, 507, 1175, 1310, 1583, 1783
ScaI	AGTACT	1 cut(s)	42
SchI	GAGTC	2 cut(s)	553, 2104
SduI	GDGCHC	4 cut(s)	122, 1193, 1927, 2112
SexAI	ACCWGGT	2 cut(s)	350, 828
SfaNI	GCATC	4 cut(s)	187, 1110, 1423, 1450
SfcI	CTRYAG	1 cut(s)	981
SfuI	TTCGAA	1 cut(s)	359
SinI	GGWCC	6 cut(s)	211, 507, 1175, 1310, 1583, 1783
SmaI	CCCGGG	1 cut(s)	1833
SmiMI	CAYNNNNRTG	5 cut(s)	98, 726, 1118, 1802, 2211
SmlI	CTYRAG	3 cut(s)	1247, 1764, 2209
SmoI	CTYRAG	3 cut(s)	1247, 1764, 2209
Sse9I	AATT	8 cut(s)	697, 1105, 1345, 1494, 1518, 1650, 1874, 2113
SseBI	AGGCCT	2 cut(s)	68, 1389
SsiI	CCGC	8 cut(s)	147, 191, 202, 209, 405, 633, 1452, 1912
SspMI	CTAG	5 cut(s)	807, 1127, 1916, 2021, 2228
SstI	GAGCTC	1 cut(s)	122
StuI	AGGCCT	2 cut(s)	68, 1389
StyI	CCWWGG	1 cut(s)	1296
TaaI	ACNGT	7 cut(s)	263, 326, 1019, 1038, 1468, 1867, 2080
TaiI	ACGT	6 cut(s)	251, 339, 609, 1219, 1713, 1757
TaqI	TCGA	6 cut(s)	359, 1137, 1620, 1921, 2028, 2093
TaqII	GACCGA	1 cut(s)	1163
TasI	AATT	8 cut(s)	697, 1105, 1345, 1494, 1518, 1650, 1874, 2113
TatI	WGTACW	6 cut(s)	40, 474, 939, 1038, 1468, 2260
TauI	GCSGC	2 cut(s)	194, 1454
TfiI	GAWTC	1 cut(s)	926
Tru1I	TTAA	3 cut(s)	519, 651, 834
Tru9I	TTAA	3 cut(s)	519, 651, 834
TscAI	CASTG	7 cut(s)	63, 268, 277, 738, 1059, 1272, 1861
TseFI	GTSAC	4 cut(s)	913, 1069, 1324, 1859
TseI	GCWGC	9 cut(s)	162, 407, 659, 980, 983, 1079, 1448, 1454, 1697
Tsp45I	GTSAC	4 cut(s)	913, 1069, 1324, 1859
TspDTI	ATGAA	2 cut(s)	1814, 1887
TspGWI	ACGGA	2 cut(s)	609, 1899
TspMI	CCCGGG	1 cut(s)	1831
TspRI	CASTG	7 cut(s)	63, 268, 277, 738, 1059, 1272, 1861
Tth111I	GACNNNGTC	1 cut(s)	1781
Van91I	CCANNNNNTGG	1 cut(s)	1210
VneI	GTGCAC	2 cut(s)	1189, 2108
VpaK11BI	GGWCC	6 cut(s)	211, 507, 1175, 1310, 1583, 1783
XagI	CCTNNNNNAGG	1 cut(s)	1383
XapI	RAATTY	1 cut(s)	1874
XceI	RCATGY	2 cut(s)	666, 2270
XcmI	CCANNNNNNNNNTGG	2 cut(s)	445, 1294
XmaI	CCCGGG	1 cut(s)	1831
XmiI	GTMKAC	1 cut(s)	1776
XmnI	GAANNNNTTC	1 cut(s)	2150
XspI	CTAG	5 cut(s)	807, 1127, 1916, 2021, 2228
ZrmI	AGTACT	1 cut(s)	42

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.