Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006321.1

Orthogroup ID

OG0003333

Physical Location & Seq

Genomic Coordinates Reverse (-)

19060 .. 21475

Gene Structure 2416 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0006321.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1896 bp

atgcaggtggtgtctactgaggccagagcaatgtacaatatgggattggcaggattgacattctgggccccaaacattaacattttccgagacccgagatggggaagaggccaggagactccgggagaagaccctttgctcacgagtaactacagttcgggatacgttagaggtcttcaacaaaccgatagcgaagacaaaaacaggcttaaagttgcagcatgttgtaaacattatacagcctatgatttggaccattggaacggatatgacagagataccttcaatgcagtggtaacaaaacaagatatggatgatacatttcaaccaccattcagaagttgtgttcttgatgggaatgctgctagtgtcatgtgttcataccaacaggttaatggaaaaccaacctgcgcagacccagaccttctttctggggttatccgaggcgaatggaagttgaatggatacatagtcaccgattgtgattcaatagaggtgtactatgacaaccaacactacaccaaaacaccagaagaagctgcagctacggctatattggcaggagtggatctagactgtggatttttcttaagcaattacacagaaggagcagtgagaggaggacttataactgaggcagccattgacaaggccatcacaaacaattttggcactttgatgcgtctaggcttcttcgatggtgatccaagcaagcaaccatatggagatctcggtccaaaggatgtgtgcactccagagaaccaggagctggcacgtgaaactgcgagacaagggatagtgttgctcaagaacactccagaatcactgcctctgtctccaacagccatcaaatccatggcagttataggtcccaatagcaatgccacaaacactatgattggcaactacgcaggcaccccttgcaactatacaactcctttgcaaggcctaacagccgtagtttccacaactttggtggccgggtgcgttaatgtggcttgtggcactgcccaggtagatgatgctaccaagttagcagccacagcagatgcaactgtacttatagtgggtgcagatctatcaatagaggcagagagtcatgatagaaccgacctctatcttccaggacagcaaactcttctaataactgaagtagcgaaggcttctaaaggacctgtaatccttgtcataatgtctggaggagggttcgatattacctttgcaaaaaatgatgataaaattacaagcattctatgggttggttaccccggcgaagctggtggagctgccattgctgatgttatttttggcttttataatccaagtggaagactacccatgacgtggtatccacaagcttatttagacaaggtccctatgacaaacatgaatatgagacctgatcctgccagtggatacccgggcaggacataccggttttacactggtgacacagtttatgcatttggatacggaataagctattccaccttcaatcacagcctagttcgagcaccgaagcaagtttccattcccttagaggaggatcatgtatgccactcatcaaattgccaatcagttgatgttgtagaagaaaggtgtcaaaatctagctttcgatatccatttgggggtgaaaaacatgggcaaaatgagtggaagtcatacagtcttattgtattcgagtcctccatctgtgcacaattctcctaaaaagcacttgttgggattcgagaaggtgttccttagctctcagggacaagcattggtcaagttcaatgtggatgtttgcaagcacttgagtgtggttgatgagcgaggaaataggaaagttgctttgggagatcatgtactacatgtgggagacttgaaacatacattgagtgtgaagatttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0002376 GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005576 GO:0005618 GO:0005623 GO:0005975 GO:0005976 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009044 GO:0009056 GO:0009057 GO:0009605 GO:0009607 GO:0009627 GO:0009814 GO:0009987 GO:0010383 GO:0010410 GO:0016052 GO:0016787 GO:0016798 GO:0030312 GO:0031221 GO:0031222 GO:0043170 GO:0043207 GO:0044036 GO:0044237 GO:0044238 GO:0044260 GO:0044464 GO:0045087 GO:0045491 GO:0045493 GO:0046556 GO:0048046 GO:0050896 GO:0051704 GO:0051707 GO:0071554 GO:0071704 GO:0071944 GO:0097599 GO:0098542 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00520 ko01100 map00520 map01100

Pfam Domains

Protein Families

Fn3-like Glyco_hydro_3 Glyco_hydro_3_C

Protein Analysis

631

Amino Acids

68.49

Weight (kDa)

5.35

Isoelectric Point (pI)

32.52

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003333)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G09730 AT5G64570 AT5G64570 AT5G64570
fragaria_vesca	FvH4_5g30690 FvH4_5g30710 FvH4_5g30710 FvH4_5g30710 FvH4_5g30710
malus_domestica	MD08G1221800.v1.1 MD15G1414100.v1.1
prunus_persica	Prupe.1G559400_v2.0.a1 Prupe.1G559400_v2.0.a1
pyrus_communis	pycom08g19240 pycom15g36840
rosa_chinensis	RchiOBHm_Chr7g0225551 RchiOBHm_Chr7g0225581
rosa_laevigata	RLG00000001804 RLG00000001806
rosa_multiflora	Rmu_co8377913.1_g000001 Rmu_sc0003876.1_g000021 Rmu_sc0006321.1_g000006
rosa_roxburghii	Rroxscaffold_3G00233670 Rroxscaffold_3G00233690
rosa_rugosa	Rorug07G0231600 Rorug07G0231800
rosa_samantha	Rh7AG372300 Rh7AG372500 Rh7BG365400 Rh7BG365500 Rh7CG390600 Rh7CG390800 Rh7DG376200 Rh7DG376300
rosa_wichuraiana	Rw7G031750 Rw7G031760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	629, 1317
Acc16I	TGCGCA	1 cut(s)	412
Acc36I	ACCTGC	1 cut(s)	416
AccB1I	GGYRCC	1 cut(s)	914
AccB7I	CCANNNNNTGG	2 cut(s)	769, 1344
AccI	GTMKAC	1 cut(s)	14
AclWI	GGATC	4 cut(s)	576, 698, 1397, 1554
AcoI	YGGCCR	1 cut(s)	978
AcuI	CTGAAG	1 cut(s)	1170
AcvI	CACGTG	1 cut(s)	776
AfaI	GTAC	4 cut(s)	35, 500, 1059, 1851
AfiI	CCNNNNNNNGG	7 cut(s)	100, 101, 769, 944, 1344, 1412, 1630
AflII	CTTAAG	1 cut(s)	589
AflIII	ACRYGT	1 cut(s)	1855
AgeI	ACCGGT	1 cut(s)	1434
AgsI	TTSAA	8 cut(s)	179, 286, 326, 460, 489, 1495, 1777, 1870
AjiI	CACGTC	1 cut(s)	1344
AjnI	CCWGG	4 cut(s)	111, 762, 1011, 1123
AjuI	GAANNNNNNNTTGG	2 cut(s)	1820, 1852
AleI	CACNNNNGTG	1 cut(s)	1800
AluBI	AGCT	9 cut(s)	539, 545, 769, 1277, 1286, 1358, 1482, 1613, 1749
AluI	AGCT	9 cut(s)	539, 545, 769, 1277, 1286, 1358, 1482, 1613, 1749
Alw21I	GWGCWC	3 cut(s)	752, 1516, 1701
Alw26I	GTCTC	6 cut(s)	84, 110, 781, 840, 1390, 1857
Alw44I	GTGCAC	2 cut(s)	748, 1697
AlwI	GGATC	4 cut(s)	576, 698, 1397, 1554
AlwNI	CAGNNNCTG	1 cut(s)	769
Ama87I	CYCGRG	2 cut(s)	94, 1420
AoxI	GGCC	6 cut(s)	21, 66, 109, 651, 946, 978
ApaI	GGGCCC	1 cut(s)	70
ApaLI	GTGCAC	2 cut(s)	748, 1697
ApeKI	GCWGC	7 cut(s)	218, 362, 539, 542, 638, 1037, 1286
AsiGI	ACCGGT	1 cut(s)	1434
Asp700I	GAANNNNTTC	1 cut(s)	1739
AspLEI	GCGC	1 cut(s)	413
AspS9I	GGNCC	7 cut(s)	66, 67, 253, 734, 869, 1172, 1372
AsuC2I	CCSGG	5 cut(s)	123, 982, 1269, 1421, 1422
AsuHPI	GGTGA	4 cut(s)	466, 713, 1460, 1645
AvaI	CYCGRG	2 cut(s)	94, 1420
AvaII	GGWCC	5 cut(s)	253, 734, 869, 1172, 1372
BaeGI	GKGCMC	3 cut(s)	70, 752, 1701
BanI	GGYRCC	1 cut(s)	914
BanII	GRGCYC	1 cut(s)	70
BauI	CACGAG	1 cut(s)	142
BbrPI	CACGTG	1 cut(s)	776
BbsI	GAAGAC	4 cut(s)	135, 167, 201, 1336
Bbv12I	GWGCWC	3 cut(s)	752, 1516, 1701
BbvI	GCAGC	7 cut(s)	230, 349, 526, 554, 650, 1049, 1273
BccI	CCATC	6 cut(s)	93, 347, 662, 692, 854, 1699
BceAI	ACGGC	2 cut(s)	564, 941
BciT130I	CCWGG	4 cut(s)	113, 764, 1013, 1125
BciVI	GTATCC	5 cut(s)	155, 458, 1359, 1409, 1463
BcnI	CCSGG	5 cut(s)	123, 982, 1269, 1421, 1422
BcoDI	GTCTC	6 cut(s)	84, 110, 781, 840, 1390, 1857
BfaI	CTAG	5 cut(s)	366, 572, 686, 1505, 1610
BfmI	CTRYAG	2 cut(s)	151, 540
BfrI	CTTAAG	1 cut(s)	589
BfuAI	ACCTGC	1 cut(s)	416
BfuI	GTATCC	5 cut(s)	155, 458, 1359, 1409, 1463
BglII	AGATCT	2 cut(s)	727, 1075
BisI	GCNGC	7 cut(s)	219, 363, 540, 543, 639, 1038, 1287
BlsI	GCNGC	7 cut(s)	220, 364, 541, 544, 640, 1039, 1288
Bme1390I	CCNGG	9 cut(s)	113, 123, 764, 982, 1013, 1125, 1269, 1421, 1422
Bme18I	GGWCC	5 cut(s)	253, 734, 869, 1172, 1372
BmeT110I	CYCGRG	2 cut(s)	94, 1420
BmgBI	CACGTC	1 cut(s)	1344
BmgT120I	GGNCC	7 cut(s)	66, 67, 253, 734, 869, 1172, 1372
BmiI	GGNNCC	5 cut(s)	68, 69, 871, 916, 1374
BmrFI	CCNGG	9 cut(s)	113, 123, 764, 982, 1013, 1125, 1269, 1421, 1422
BmsI	GCATC	3 cut(s)	669, 1012, 1039
BpiI	GAAGAC	4 cut(s)	135, 167, 201, 1336
BpmI	CTGGAG	3 cut(s)	738, 801, 1218
Bpu10I	CCTNAGC	1 cut(s)	1745
BpuEI	CTTGAG	2 cut(s)	791, 1819
BpuMI	CCSGG	5 cut(s)	123, 982, 1269, 1421, 1422
BsaAI	YACGTR	1 cut(s)	776
BsaBI	GATNNNNATC	1 cut(s)	702
BsaI	GGTCTC	2 cut(s)	84, 1390
BsaJI	CCNNGG	5 cut(s)	442, 855, 1011, 1267, 1420
BsaWI	WCCGGW	1 cut(s)	1434
BsaXI	ACNNNNNCTCC	2 cut(s)	1833, 1863
Bsc4I	CCNNNNNNNGG	7 cut(s)	100, 101, 769, 944, 1344, 1412, 1630
Bse118I	RCCGGY	1 cut(s)	1434
Bse1I	ACTGG	2 cut(s)	1410, 1450
Bse3DI	GCAATG	3 cut(s)	36, 886, 1290
Bse8I	GATNNNNATC	1 cut(s)	702
BseBI	CCWGG	4 cut(s)	113, 764, 1013, 1125
BseDI	CCNNGG	5 cut(s)	442, 855, 1011, 1267, 1420
BseGI	GGATG	3 cut(s)	319, 748, 1789
BseJI	GATNNNNATC	1 cut(s)	702
BseLI	CCNNNNNNNGG	7 cut(s)	100, 101, 769, 944, 1344, 1412, 1630
BseMI	GCAATG	3 cut(s)	36, 886, 1290
BseMII	CTCAG	3 cut(s)	9, 624, 1766
BseNI	ACTGG	2 cut(s)	1410, 1450
BseRI	GAGGAG	3 cut(s)	633, 1215, 1556
BseSI	GKGCMC	3 cut(s)	70, 752, 1701
BseXI	GCAGC	7 cut(s)	230, 349, 526, 554, 650, 1049, 1273
BsgI	GTGCAG	1 cut(s)	1092
BshFI	GGCC	6 cut(s)	23, 68, 111, 653, 948, 980
BshNI	GGYRCC	1 cut(s)	914
BshTI	ACCGGT	1 cut(s)	1434
BsiHKAI	GWGCWC	3 cut(s)	752, 1516, 1701
BsiHKCI	CYCGRG	2 cut(s)	94, 1420
BsiSI	CCGG	5 cut(s)	122, 981, 1269, 1421, 1435
BslFI	GGGAC	3 cut(s)	855, 1358, 1770
BslI	CCNNNNNNNGG	7 cut(s)	100, 101, 769, 944, 1344, 1412, 1630
BsmAI	GTCTC	6 cut(s)	84, 110, 781, 840, 1390, 1857
BsmFI	GGGAC	3 cut(s)	855, 1358, 1770
BsmI	GAATGC	2 cut(s)	364, 1248
BsnI	GGCC	6 cut(s)	23, 68, 111, 653, 948, 980
Bso31I	GGTCTC	2 cut(s)	84, 1390
BsoBI	CYCGRG	2 cut(s)	94, 1420
Bsp120I	GGGCCC	1 cut(s)	66
Bsp1286I	GDGCHC	4 cut(s)	70, 752, 1516, 1701
Bsp1407I	TGTACA	1 cut(s)	33
Bsp143I	GATC	7 cut(s)	568, 703, 727, 1075, 1402, 1546, 1843
Bsp19I	CCATGG	1 cut(s)	855
BspANI	GGCC	6 cut(s)	23, 68, 111, 653, 948, 980
BspCNI	CTCAG	3 cut(s)	10, 625, 1765
BspHI	TCATGA	1 cut(s)	1099
BspLI	GGNNCC	5 cut(s)	68, 69, 871, 916, 1374
BspMAI	CTGCAG	1 cut(s)	544
BspMI	ACCTGC	1 cut(s)	416
BspPI	GGATC	4 cut(s)	576, 698, 1397, 1554
BspT107I	GGYRCC	1 cut(s)	914
BspTI	CTTAAG	1 cut(s)	589
BspTNI	GGTCTC	2 cut(s)	84, 1390
BsrDI	GCAATG	3 cut(s)	36, 886, 1290
BsrFI	RCCGGY	1 cut(s)	1434
BsrGI	TGTACA	1 cut(s)	33
BsrI	ACTGG	2 cut(s)	1410, 1450
BssAI	RCCGGY	1 cut(s)	1434
BssECI	CCNNGG	5 cut(s)	442, 855, 1011, 1267, 1420
BssMI	GATC	7 cut(s)	568, 703, 727, 1075, 1402, 1546, 1843
BssSI	CACGAG	1 cut(s)	142
BssT1I	CCWWGG	1 cut(s)	855
Bst2BI	CACGAG	1 cut(s)	142
Bst2UI	CCWGG	4 cut(s)	113, 764, 1013, 1125
Bst4CI	ACNGT	5 cut(s)	155, 578, 1057, 1456, 1669
Bst6I	CTCTTC	2 cut(s)	100, 1143
BstAFI	CTTAAG	1 cut(s)	589
BstAPI	GCANNNNNTGC	1 cut(s)	921
BstAUI	TGTACA	1 cut(s)	33
BstBAI	YACGTR	1 cut(s)	776
BstC8I	GCNNGC	4 cut(s)	713, 771, 913, 1793
BstDEI	CTNAG	5 cut(s)	18, 633, 1537, 1745, 1752
BstDSI	CCRYGG	1 cut(s)	855
BstEII	GGTNACC	1 cut(s)	1262
BstENI	CCTNNNNNAGG	1 cut(s)	942
BstF5I	GGATG	3 cut(s)	319, 748, 1789
BstHHI	GCGC	1 cut(s)	413
BstKTI	GATC	7 cut(s)	571, 706, 730, 1078, 1405, 1549, 1846
BstMAI	GTCTC	6 cut(s)	84, 110, 781, 840, 1390, 1857
BstMBI	GATC	7 cut(s)	568, 703, 727, 1075, 1402, 1546, 1843
BstMWI	GCNNNNNNNGC	6 cut(s)	548, 557, 921, 1043, 1283, 1292
BstNI	CCWGG	4 cut(s)	113, 764, 1013, 1125
BstNSI	RCATGY	2 cut(s)	225, 1859
BstPI	GGTNACC	1 cut(s)	1262
BstSCI	CCNGG	9 cut(s)	111, 121, 762, 980, 1011, 1123, 1267, 1419, 1420
BstSFI	CTRYAG	2 cut(s)	151, 540
BstSLI	GKGCMC	3 cut(s)	70, 752, 1701
BstV1I	GCAGC	7 cut(s)	230, 349, 526, 554, 650, 1049, 1273
BstV2I	GAAGAC	4 cut(s)	135, 167, 201, 1336
BstX2I	RGATCY	3 cut(s)	568, 727, 1075
BstXI	CCANNNNNNTGG	1 cut(s)	973
BstYI	RGATCY	3 cut(s)	568, 727, 1075
BsuI	GTATCC	5 cut(s)	155, 458, 1359, 1409, 1463
BsuRI	GGCC	6 cut(s)	23, 68, 111, 653, 948, 980
BtgI	CCRYGG	1 cut(s)	855
BtrI	CACGTC	1 cut(s)	1344
BtsCI	GGATG	3 cut(s)	319, 748, 1789
BtsI	GCAGTG	4 cut(s)	297, 618, 824, 1005
BtsIMutI	CAGTG	6 cut(s)	297, 618, 824, 1005, 1417, 1443
BveI	ACCTGC	1 cut(s)	416
Cac8I	GCNNGC	4 cut(s)	713, 771, 913, 1793
CaiI	CAGNNNCTG	1 cut(s)	769
CciI	TCATGA	1 cut(s)	1099
CfoI	GCGC	1 cut(s)	413
Cfr10I	RCCGGY	1 cut(s)	1434
Cfr13I	GGNCC	7 cut(s)	66, 67, 253, 734, 869, 1172, 1372
Cfr9I	CCCGGG	1 cut(s)	1420
CseI	GACGC	1 cut(s)	671
Csp6I	GTAC	4 cut(s)	34, 499, 1058, 1850
CspAI	ACCGGT	1 cut(s)	1434
CspCI	CAANNNNNGTGG	4 cut(s)	957, 992, 1636, 1671
CviQI	GTAC	4 cut(s)	34, 499, 1058, 1850
DdeI	CTNAG	5 cut(s)	18, 633, 1537, 1745, 1752
DpnI	GATC	7 cut(s)	570, 705, 729, 1077, 1404, 1548, 1845
DpnII	GATC	7 cut(s)	568, 703, 727, 1075, 1402, 1546, 1843
EaeI	YGGCCR	1 cut(s)	978
Eam1104I	CTCTTC	2 cut(s)	100, 1143
EarI	CTCTTC	2 cut(s)	100, 1143
Eco130I	CCWWGG	1 cut(s)	855
Eco147I	AGGCCT	1 cut(s)	948
Eco24I	GRGCYC	1 cut(s)	70
Eco31I	GGTCTC	2 cut(s)	84, 1390
Eco32I	GATATC	1 cut(s)	1621
Eco47I	GGWCC	5 cut(s)	253, 734, 869, 1172, 1372
Eco57I	CTGAAG	1 cut(s)	1170
Eco72I	CACGTG	1 cut(s)	776
Eco88I	CYCGRG	2 cut(s)	94, 1420
Eco91I	GGTNACC	1 cut(s)	1262
EcoNI	CCTNNNNNAGG	1 cut(s)	942
EcoO109I	RGGNCCY	4 cut(s)	67, 869, 1172, 1372
EcoO65I	GGTNACC	1 cut(s)	1262
EcoRII	CCWGG	4 cut(s)	111, 762, 1011, 1123
EcoRV	GATATC	1 cut(s)	1621
EcoT14I	CCWWGG	1 cut(s)	855
EcoT22I	ATGCAT	1 cut(s)	1465
EcoT38I	GRGCYC	1 cut(s)	70
ErhI	CCWWGG	1 cut(s)	855
FaqI	GGGAC	3 cut(s)	855, 1358, 1770
FauNDI	CATATG	1 cut(s)	721
FblI	GTMKAC	1 cut(s)	14
Fnu4HI	GCNGC	7 cut(s)	219, 363, 540, 543, 639, 1038, 1287
FokI	GGATG	3 cut(s)	326, 755, 1796
FriOI	GRGCYC	1 cut(s)	70
Fsp4HI	GCNGC	7 cut(s)	219, 363, 540, 543, 639, 1038, 1287
FspBI	CTAG	5 cut(s)	366, 572, 686, 1505, 1610
FspI	TGCGCA	1 cut(s)	412
GlaI	GCGC	1 cut(s)	412
GluI	GCNGC	7 cut(s)	219, 363, 540, 543, 639, 1038, 1287
GsuI	CTGGAG	3 cut(s)	738, 801, 1218
HaeIII	GGCC	6 cut(s)	23, 68, 111, 653, 948, 980
HapII	CCGG	5 cut(s)	122, 981, 1269, 1421, 1435
HgaI	GACGC	1 cut(s)	671
HhaI	GCGC	1 cut(s)	413
Hin6I	GCGC	1 cut(s)	411
HinP1I	GCGC	1 cut(s)	411
HindIII	AAGCTT	1 cut(s)	1356
HinfI	GANTC	6 cut(s)	118, 485, 821, 1096, 1684, 1728
HpaII	CCGG	5 cut(s)	122, 981, 1269, 1421, 1435
HphI	GGTGA	4 cut(s)	466, 713, 1460, 1645
Hpy166II	GTNNAC	5 cut(s)	15, 230, 499, 750, 1699
Hpy188I	TCNGA	3 cut(s)	89, 338, 443
Hpy8I	GTNNAC	5 cut(s)	15, 230, 499, 750, 1699
HpyAV	CCTTC	6 cut(s)	292, 434, 599, 1153, 1501, 1729
HpyCH4III	ACNGT	5 cut(s)	155, 578, 1057, 1456, 1669
HpyCH4IV	ACGT	3 cut(s)	165, 775, 1343
HpyF10VI	GCNNNNNNNGC	6 cut(s)	548, 557, 921, 1043, 1283, 1292
HpyF3I	CTNAG	5 cut(s)	18, 633, 1537, 1745, 1752
HpySE526I	ACGT	3 cut(s)	165, 775, 1343
HspAI	GCGC	1 cut(s)	411
Kzo9I	GATC	7 cut(s)	568, 703, 727, 1075, 1402, 1546, 1843
LmnI	GCTCC	3 cut(s)	608, 766, 1283
Lsp1109I	GCAGC	7 cut(s)	230, 349, 526, 554, 650, 1049, 1273
LweI	GCATC	3 cut(s)	669, 1012, 1039
MaeI	CTAG	5 cut(s)	366, 572, 686, 1505, 1610
MaeII	ACGT	3 cut(s)	165, 775, 1343
MaeIII	GTNAC	5 cut(s)	146, 295, 472, 1262, 1448
MalI	GATC	7 cut(s)	570, 705, 729, 1077, 1404, 1548, 1845
MboI	GATC	7 cut(s)	568, 703, 727, 1075, 1402, 1546, 1843
MflI	RGATCY	3 cut(s)	568, 727, 1075
MhlI	GDGCHC	4 cut(s)	70, 752, 1516, 1701
MluCI	AATT	5 cut(s)	595, 664, 1239, 1567, 1702
MlyI	GAGTC	3 cut(s)	112, 1105, 1693
MmeI	TCCRAC	1 cut(s)	863
Mph1103I	ATGCAT	1 cut(s)	1465
MroXI	GAANNNNTTC	1 cut(s)	1739
MseI	TTAA	5 cut(s)	78, 210, 393, 590, 990
MslI	CAYNNNNRTG	3 cut(s)	677, 1391, 1800
MspCI	CTTAAG	1 cut(s)	589
MspI	CCGG	5 cut(s)	122, 981, 1269, 1421, 1435
MspR9I	CCNGG	9 cut(s)	113, 123, 764, 982, 1013, 1125, 1269, 1421, 1422
Mva1269I	GAATGC	2 cut(s)	364, 1248
MvaI	CCWGG	4 cut(s)	113, 764, 1013, 1125
MwoI	GCNNNNNNNGC	6 cut(s)	548, 557, 921, 1043, 1283, 1292
NciI	CCSGG	5 cut(s)	123, 982, 1269, 1421, 1422
NcoI	CCATGG	1 cut(s)	855
NdeI	CATATG	1 cut(s)	721
NdeII	GATC	7 cut(s)	568, 703, 727, 1075, 1402, 1546, 1843
NlaIV	GGNNCC	5 cut(s)	68, 69, 871, 916, 1374
NmuCI	GTSAC	2 cut(s)	472, 1448
NsbI	TGCGCA	1 cut(s)	412
NsiI	ATGCAT	1 cut(s)	1465
NspI	RCATGY	2 cut(s)	225, 1859
OliI	CACNNNNGTG	1 cut(s)	1800
PagI	TCATGA	1 cut(s)	1099
PceI	AGGCCT	1 cut(s)	948
PciI	ACATGT	1 cut(s)	1855
PctI	GAATGC	2 cut(s)	364, 1248
PdmI	GAANNNNTTC	1 cut(s)	1739
PfeI	GAWTC	3 cut(s)	485, 821, 1728
PflFI	GACNNNGTC	1 cut(s)	1370
PflMI	CCANNNNNTGG	2 cut(s)	769, 1344
PfoI	TCCNGGA	2 cut(s)	121, 1123
PinAI	ACCGGT	1 cut(s)	1434
PkrI	GCNGC	7 cut(s)	220, 364, 541, 544, 640, 1039, 1288
PleI	GAGTC	3 cut(s)	112, 1104, 1692
PmaCI	CACGTG	1 cut(s)	776
PmlI	CACGTG	1 cut(s)	776
PpsI	GAGTC	3 cut(s)	112, 1104, 1692
Ppu21I	YACGTR	1 cut(s)	776
PpuMI	RGGWCCY	3 cut(s)	869, 1172, 1372
PscI	ACATGT	1 cut(s)	1855
PsiI	TTATAA	2 cut(s)	629, 1317
Psp5II	RGGWCCY	3 cut(s)	869, 1172, 1372
Psp6I	CCWGG	4 cut(s)	111, 762, 1011, 1123
PspCI	CACGTG	1 cut(s)	776
PspEI	GGTNACC	1 cut(s)	1262
PspGI	CCWGG	4 cut(s)	111, 762, 1011, 1123
PspN4I	GGNNCC	5 cut(s)	68, 69, 871, 916, 1374
PspOMI	GGGCCC	1 cut(s)	66
PspPI	GGNCC	7 cut(s)	66, 67, 253, 734, 869, 1172, 1372
PspPPI	RGGWCCY	3 cut(s)	869, 1172, 1372
PsrI	GAACNNNNNNTAC	2 cut(s)	139, 171
PstI	CTGCAG	1 cut(s)	544
PstNI	CAGNNNCTG	1 cut(s)	769
PsuI	RGATCY	3 cut(s)	568, 727, 1075
PsyI	GACNNNGTC	1 cut(s)	1370
RsaI	GTAC	4 cut(s)	35, 500, 1059, 1851
RsaNI	GTAC	4 cut(s)	34, 499, 1058, 1850
RseI	CAYNNNNRTG	3 cut(s)	677, 1391, 1800
SaqAI	TTAA	5 cut(s)	78, 210, 393, 590, 990
SatI	GCNGC	7 cut(s)	219, 363, 540, 543, 639, 1038, 1287
Sau3AI	GATC	7 cut(s)	568, 703, 727, 1075, 1402, 1546, 1843
Sau96I	GGNCC	7 cut(s)	66, 67, 253, 734, 869, 1172, 1372
SchI	GAGTC	3 cut(s)	112, 1105, 1693
ScrFI	CCNGG	9 cut(s)	113, 123, 764, 982, 1013, 1125, 1269, 1421, 1422
SduI	GDGCHC	4 cut(s)	70, 752, 1516, 1701
SfaNI	GCATC	3 cut(s)	669, 1012, 1039
SfcI	CTRYAG	2 cut(s)	151, 540
SinI	GGWCC	5 cut(s)	253, 734, 869, 1172, 1372
SmaI	CCCGGG	1 cut(s)	1422
SmiMI	CAYNNNNRTG	3 cut(s)	677, 1391, 1800
SmlI	CTYRAG	3 cut(s)	589, 806, 1798
SmoI	CTYRAG	3 cut(s)	589, 806, 1798
Sse9I	AATT	5 cut(s)	595, 664, 1239, 1567, 1702
SseBI	AGGCCT	1 cut(s)	948
SspMI	CTAG	5 cut(s)	366, 572, 686, 1505, 1610
StuI	AGGCCT	1 cut(s)	948
StyD4I	CCNGG	9 cut(s)	111, 121, 762, 980, 1011, 1123, 1267, 1419, 1420
StyI	CCWWGG	1 cut(s)	855
TaaI	ACNGT	5 cut(s)	155, 578, 1057, 1456, 1669
TaiI	ACGT	3 cut(s)	168, 778, 1346
TaqI	TCGA	6 cut(s)	696, 1209, 1510, 1617, 1682, 1731
TaqII	GACCGA	1 cut(s)	722
TasI	AATT	5 cut(s)	595, 664, 1239, 1567, 1702
TatI	WGTACW	4 cut(s)	33, 498, 1057, 1849
TfiI	GAWTC	3 cut(s)	485, 821, 1728
Tru1I	TTAA	5 cut(s)	78, 210, 393, 590, 990
Tru9I	TTAA	5 cut(s)	78, 210, 393, 590, 990
TscAI	CASTG	6 cut(s)	297, 618, 831, 1012, 1417, 1450
TseFI	GTSAC	2 cut(s)	472, 1448
TseI	GCWGC	7 cut(s)	218, 362, 539, 542, 638, 1037, 1286
Tsp45I	GTSAC	2 cut(s)	472, 1448
TspDTI	ATGAA	2 cut(s)	369, 1403
TspGWI	ACGGA	2 cut(s)	279, 1488
TspMI	CCCGGG	1 cut(s)	1420
TspRI	CASTG	6 cut(s)	297, 618, 831, 1012, 1417, 1450
Tth111I	GACNNNGTC	1 cut(s)	1370
Van91I	CCANNNNNTGG	2 cut(s)	769, 1344
Vha464I	CTTAAG	1 cut(s)	589
VneI	GTGCAC	2 cut(s)	748, 1697
VpaK11BI	GGWCC	5 cut(s)	253, 734, 869, 1172, 1372
XagI	CCTNNNNNAGG	1 cut(s)	942
XbaI	TCTAGA	1 cut(s)	571
XceI	RCATGY	2 cut(s)	225, 1859
XcmI	CCANNNNNNNNNTGG	3 cut(s)	392, 853, 973
XmaI	CCCGGG	1 cut(s)	1420
XmiI	GTMKAC	1 cut(s)	14
XmnI	GAANNNNTTC	1 cut(s)	1739
XspI	CTAG	5 cut(s)	366, 572, 686, 1505, 1610
Zsp2I	ATGCAT	1 cut(s)	1465

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.