Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0003333

Physical Location & Seq

Genomic Coordinates Reverse (-)

21619488 .. 21624116

Gene Structure 4629 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g30710.t4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2400 bp

ATGAAACAGAGAAGCCATTTTTGTTCCTTCTCTTCAAACTCTCCCCTCAAGGCCACAACTTCAATGTCCTCCTCCTCTTCCTGCTCCTCTGTTCACAACAGAGCAGCACCCCCGAAGGCCTTGCTCTGCTTCTGCTTCGCTCTTTGTTACATACTGTTATGTCTCTGCTCTGTGAGCTCTGTTTCCGGCCAGTCGTTCGCCTGCGGCGAAAGCGGTAATGCCAGCAGCTTCCCGTTCTGCGACAAGTCGTTGGCGGCCGATGCGAGGGTGGCGGACCTGGTGCAGAGGCTGACATTGCAAGAGAAGATTACGTTTCTGGTGAACAGTGCAGGGAGCGTGAGCAGGCTTGGGATACCAAAGTACGAGTGGTGGTCGGAGGCTTTACACGGTGTGTCGTACGTCGGCCCAGGAACTAGGTTTTCTAGTGTCGTCCCCGGAGCGACCAGCTTCCCTCAGCCCATTTTGACCGCCGCGTCGTTCAACAACTCTCTGTTTGAAGCCATTGGAAGGGTGGTGTCAACTGAGGCTAGAGCAATGTACAATGTGGGATTGGCAGGATTGACATACTGGTCTCCAAACATTAACATTTTCCGAGACCCGAGATGGGGAAGAGGCCAGGAGACTCCGGGAGAAGACCCATTGCTTACGAGTAACTACGGATCAGGATATGTTAGAGGTCTTCAACAAACCGATAGCGAAGACAAGAGTAGGCTTAAAGTTGCAGCATGTTGTAAACATTATACAGCCTATGATTTGGACAATTGGAAAGGAGTTGACAGATACACCTTCAATGCAGTGGTAACAAAACAAGATATGGATGATACATTTCAACCACCATTCAAAAGTTGTGTTCTTGATGGGAATGTTGCTAGTGTCATGTGTTCTTACAACAAGGTGAATGGAACACCAACCTGTGCAGATCCCGACCTTCTTTCTGGGGTTATCCGAGGCGAATGGAAGTTGAATGGATACATTGTTACTGATTGTGATTCAATAGATGTCTACTACAAGAACCAACACTACACCAAGACGCCTGAAGAGGCTGCAGCAAAGGGCATATTGGCAGGAGTGGATCTAGACTGTGGATCATTTCTAGGAAAATACACAGAAGGAGCAGTGAAAGGGGGACTTGTTACTGAGGCAGCTATTGACAAGGCAATCACAAACAATTTTGGCACTTTGATGCGTCTCGGCTTTTTTGATGGAGATCCAAGGAAGCAACCATATGGAAATCTTGGTCCAAAAGATGTGTGCACTGCAGCAAACCAGGAACTGGCACGTGAAACAGCAAGACAAGGGATAGTGTTGCTCAAGAATGCTCCAGGATCACTGCCTCTGTCTCCCACAGCCATCAAATCCTTGGCAGTTATAGGTCCCAATGGCAATGTCACAAAGACCATGATCGGCAACTACGAAGGCAACCCTTGCAAATATACCACTCCTTTGCAAGGCCTAACAGCAGTAGTTCCCACAACATTTGTGGCCGGGTGCCCGGATGTGGCTTGTGGCACTGCCAAGGTTGATGATGCTACCAAGTTAGCAGCAGCAGCAGATGCAACTGTAGTTATAGTGGGTGAAAATCAATCAATTGAGACTGAGAGTCATGATAGAATCGACCTCTATCTTCCAGGACAGCAAACTCTTCTAATAACTGAAGTAGCAAAGGCATCTAAAGGACCTGTAATACTTGTCATAATGTCTGGAGGAGGTTTTGATATCACCTTTGCAAAAAATAATGACAAAATTACAAGCATTCTTTGGGTTGGCTACCCCGGCGAAGCTGGTGGAGCTGCCATTGCTGACGTGATTTTTGGCTTCTATAATCCATGTGGAAGACTACCTATGACGTGGTATCCACAAGCTTATGTAGACAAGGTCCCTATGACAAACATGAATATGAGAGCAGATCCTGCAAGTGGTTACCCAGGAAGGACTTACCGGTTTTACACTGGTGACACGGTTTATGCATTTGGAGATGGAATAAGCTACTCCACCTTCAATCACCGCCTTGTTCGAGCACCGAACCAAGTTTCCATTCCCTTAGAAGAAGATCATGTGTGCTACTCATCAAGTTGCCAATCACTTGATGTTGTCGAAGAAAGGTGTCAAAATCTAGCCTTTGATATCCATTTGGGGGTGAAAAACATGGGCAAAATGTGTGGAAGTCATACAGTCTTGCTGTATTCGAGTCCTCCATCTGTGCACAATGCACCAAAAAAGCACTTGTTGGGATTTGAAAAGGTTTTCCTTAGCTCTCAGGGAGAAGCATTGGTCAAGTTCAATGTGGATGTTTGCAAGCACTTGAGTGTGGTTGATGAGCTAGGAAATAGGAAAGTTGCTTTGGGAGATCATGTGCTGCATGTAGGAGATTTGAGACAGACATTGAGTGTGAGGATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0002376 GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005576 GO:0005618 GO:0005623 GO:0005975 GO:0005976 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009044 GO:0009056 GO:0009057 GO:0009605 GO:0009607 GO:0009627 GO:0009814 GO:0009987 GO:0010383 GO:0010410 GO:0016052 GO:0016787 GO:0016798 GO:0030312 GO:0031221 GO:0031222 GO:0043170 GO:0043207 GO:0044036 GO:0044237 GO:0044238 GO:0044260 GO:0044464 GO:0045087 GO:0045491 GO:0045493 GO:0046556 GO:0048046 GO:0050896 GO:0051704 GO:0051707 GO:0071554 GO:0071704 GO:0071944 GO:0097599 GO:0098542 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00520 ko01100 map00520 map01100

Pfam Domains

Protein Families

Fn3-like Glyco_hydro_3 Glyco_hydro_3_C

Protein Analysis

800

Amino Acids

86.09

Weight (kDa)

6.57

Isoelectric Point (pI)

33.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_3	PF00933	145 - 387	4.2e-34	Glycosyl hydrolase family 3 N terminal domain
Glyco_hydro_3_C	PF01915	434 - 610	7.4e-40	Glycosyl hydrolase family 3 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003333)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G09730 AT5G64570 AT5G64570 AT5G64570
fragaria_vesca	FvH4_5g30690 FvH4_5g30710 FvH4_5g30710 FvH4_5g30710 FvH4_5g30710
malus_domestica	MD08G1221800.v1.1 MD15G1414100.v1.1
prunus_persica	Prupe.1G559400_v2.0.a1 Prupe.1G559400_v2.0.a1
pyrus_communis	pycom08g19240 pycom15g36840
rosa_chinensis	RchiOBHm_Chr7g0225551 RchiOBHm_Chr7g0225581
rosa_laevigata	RLG00000001804 RLG00000001806
rosa_multiflora	Rmu_co8377913.1_g000001 Rmu_sc0003876.1_g000021 Rmu_sc0006321.1_g000006
rosa_roxburghii	Rroxscaffold_3G00233670 Rroxscaffold_3G00233690
rosa_rugosa	Rorug07G0231600 Rorug07G0231800
rosa_samantha	Rh7AG372300 Rh7AG372500 Rh7BG365400 Rh7BG365500 Rh7CG390600 Rh7CG390800 Rh7DG376200 Rh7DG376300
rosa_wichuraiana	Rw7G031750 Rw7G031760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	472, 568
AccB1I	GGYRCC	1 cut(s)	1488
AccB7I	CCANNNNNTGG	1 cut(s)	1273
AccI	GTMKAC	2 cut(s)	1002, 1869
AccII	CGCG	1 cut(s)	473
AciI	CCGC	7 cut(s)	204, 213, 254, 272, 468, 471, 2005
AclWI	GGATC	7 cut(s)	667, 914, 1080, 1093, 1202, 1333, 1901
AcoI	YGGCCR	3 cut(s)	187, 255, 1482
AcuI	CTGAAG	2 cut(s)	1056, 1674
AcvI	CACGTG	1 cut(s)	1280
AcyI	GRCGYC	1 cut(s)	1031
AdeI	CACNNNGTG	1 cut(s)	391
AfaI	GTAC	3 cut(s)	362, 398, 539
AfiI	CCNNNNNNNGG	9 cut(s)	264, 507, 604, 605, 1273, 1448, 1498, 1916, 2134
AgeI	ACCGGT	1 cut(s)	1938
AhdI	GACNNNNNGTC	1 cut(s)	1599
AjiI	CACGTC	2 cut(s)	1804, 1848
AjnI	CCWGG	7 cut(s)	276, 406, 615, 1266, 1321, 1627, 1924
AjuI	GAANNNNNNNTTGG	4 cut(s)	2019, 2051, 2324, 2356
AleI	CACNNNNGTG	1 cut(s)	2304
AloI	GAACNNNNNNTCC	2 cut(s)	2015, 2047
Alw21I	GWGCWC	4 cut(s)	179, 1256, 2020, 2205
Alw26I	GTCTC	8 cut(s)	167, 576, 588, 614, 1193, 1344, 1586, 2368
Alw44I	GTGCAC	2 cut(s)	1252, 2201
AlwI	GGATC	7 cut(s)	667, 914, 1080, 1093, 1202, 1333, 1901
AlwNI	CAGNNNCTG	3 cut(s)	289, 1273, 1910
Ama87I	CYCGRG	1 cut(s)	598
AoxI	GGCC	8 cut(s)	51, 117, 187, 255, 403, 613, 1450, 1482
ApaLI	GTGCAC	2 cut(s)	1252, 2201
ArsI	GACNNNNNNTTYG	2 cut(s)	1793, 1825
AsiGI	ACCGGT	1 cut(s)	1938
AspS9I	GGNCC	6 cut(s)	274, 404, 1238, 1373, 1676, 1876
AsuC2I	CCSGG	5 cut(s)	435, 627, 1486, 1493, 1773
AsuHPI	GGTGA	7 cut(s)	331, 907, 1586, 1711, 1964, 1994, 2149
AvaI	CYCGRG	1 cut(s)	598
AvaII	GGWCC	5 cut(s)	274, 1238, 1373, 1676, 1876
BaeGI	GKGCMC	3 cut(s)	1256, 1493, 2205
BaeI	ACNNNNGTAYC	2 cut(s)	344, 377
BanI	GGYRCC	1 cut(s)	1488
BanII	GRGCYC	1 cut(s)	179
BbrPI	CACGTG	1 cut(s)	1280
BbsI	GAAGAC	4 cut(s)	639, 671, 705, 1840
Bbv12I	GWGCWC	4 cut(s)	179, 1256, 2020, 2205
BbvCI	CCTCAGC	1 cut(s)	453
BccI	CCATC	6 cut(s)	597, 851, 1196, 1358, 1970, 2203
BcgI	CGANNNNNNTGC	2 cut(s)	103, 137
BciT130I	CCWGG	7 cut(s)	278, 408, 617, 1268, 1323, 1629, 1926
BciVI	GTATCC	3 cut(s)	345, 962, 1863
BcnI	CCSGG	5 cut(s)	435, 627, 1486, 1493, 1773
BcoDI	GTCTC	8 cut(s)	167, 576, 588, 614, 1193, 1344, 1586, 2368
BfaI	CTAG	8 cut(s)	414, 423, 528, 870, 1076, 1094, 2114, 2321
BfmI	CTRYAG	3 cut(s)	1044, 1257, 1560
BfuI	GTATCC	3 cut(s)	345, 962, 1863
Bme18I	GGWCC	5 cut(s)	274, 1238, 1373, 1676, 1876
BmeRI	GACNNNNNGTC	1 cut(s)	1599
BmeT110I	CYCGRG	1 cut(s)	598
BmgBI	CACGTC	2 cut(s)	1804, 1848
BmgT120I	GGNCC	6 cut(s)	274, 404, 1238, 1373, 1676, 1876
BmiI	GGNNCC	3 cut(s)	1375, 1490, 1878
BmsI	GCATC	5 cut(s)	250, 1173, 1516, 1543, 1676
BpiI	GAAGAC	4 cut(s)	639, 671, 705, 1840
BpmI	CTGGAG	2 cut(s)	1305, 1722
Bpu10I	CCTNAGC	2 cut(s)	453, 2249
BpuEI	CTTGAG	3 cut(s)	32, 1295, 2323
BpuMI	CCSGG	5 cut(s)	435, 627, 1486, 1493, 1773
BsaAI	YACGTR	1 cut(s)	1280
BsaBI	GATNNNNATC	1 cut(s)	1206
BsaHI	GRCGYC	1 cut(s)	1031
BsaI	GGTCTC	2 cut(s)	576, 588
BsaJI	CCNNGG	8 cut(s)	406, 433, 946, 1211, 1359, 1515, 1771, 1924
BsaWI	WCCGGW	1 cut(s)	1938
BsaXI	ACNNNNNCTCC	2 cut(s)	2337, 2367
Bsc4I	CCNNNNNNNGG	9 cut(s)	264, 507, 604, 605, 1273, 1448, 1498, 1916, 2134
Bse118I	RCCGGY	1 cut(s)	1938
Bse1I	ACTGG	4 cut(s)	190, 572, 1278, 1954
Bse3DI	GCAATG	5 cut(s)	293, 540, 638, 1390, 1794
Bse8I	GATNNNNATC	1 cut(s)	1206
BseBI	CCWGG	7 cut(s)	278, 408, 617, 1268, 1323, 1629, 1926
BseDI	CCNNGG	8 cut(s)	406, 433, 946, 1211, 1359, 1515, 1771, 1924
BseGI	GGATG	3 cut(s)	823, 1501, 2293
BseJI	GATNNNNATC	1 cut(s)	1206
BseLI	CCNNNNNNNGG	9 cut(s)	264, 507, 604, 605, 1273, 1448, 1498, 1916, 2134
BseMI	GCAATG	5 cut(s)	293, 540, 638, 1390, 1794
BseMII	CTCAG	5 cut(s)	467, 513, 1128, 1587, 2270
BseNI	ACTGG	4 cut(s)	190, 572, 1278, 1954
BseRI	GAGGAG	4 cut(s)	61, 64, 76, 1719
BseSI	GKGCMC	3 cut(s)	1256, 1493, 2205
BseX3I	CGGCCG	1 cut(s)	255
BsgI	GTGCAG	3 cut(s)	302, 348, 936
Bsh1236I	CGCG	1 cut(s)	473
Bsh1285I	CGRYCG	1 cut(s)	258
BshFI	GGCC	8 cut(s)	53, 119, 189, 257, 405, 615, 1452, 1484
BshNI	GGYRCC	1 cut(s)	1488
BshTI	ACCGGT	1 cut(s)	1938
BsiEI	CGRYCG	1 cut(s)	258
BsiHKAI	GWGCWC	4 cut(s)	179, 1256, 2020, 2205
BsiHKCI	CYCGRG	1 cut(s)	598
BsiSI	CCGG	7 cut(s)	186, 435, 626, 1485, 1493, 1773, 1939
BsiWI	CGTACG	1 cut(s)	396
BslFI	GGGAC	4 cut(s)	416, 1140, 1359, 1862
BslI	CCNNNNNNNGG	9 cut(s)	264, 507, 604, 605, 1273, 1448, 1498, 1916, 2134
BsmAI	GTCTC	8 cut(s)	167, 576, 588, 614, 1193, 1344, 1586, 2368
BsmBI	CGTCTC	1 cut(s)	1193
BsmFI	GGGAC	4 cut(s)	416, 1140, 1359, 1862
BsmI	GAATGC	2 cut(s)	1321, 1752
BsnI	GGCC	8 cut(s)	53, 119, 189, 257, 405, 615, 1452, 1484
Bso31I	GGTCTC	2 cut(s)	576, 588
BsoBI	CYCGRG	1 cut(s)	598
Bsp1286I	GDGCHC	5 cut(s)	179, 1256, 1493, 2020, 2205
Bsp1407I	TGTACA	1 cut(s)	537
BspACI	CCGC	7 cut(s)	204, 213, 254, 272, 468, 471, 2005
BspANI	GGCC	8 cut(s)	53, 119, 189, 257, 405, 615, 1452, 1484
BspCNI	CTCAG	5 cut(s)	466, 514, 1129, 1588, 2269
BspFNI	CGCG	1 cut(s)	473
BspHI	TCATGA	1 cut(s)	1603
BspLI	GGNNCC	3 cut(s)	1375, 1490, 1878
BspMAI	CTGCAG	2 cut(s)	1048, 1261
BspPI	GGATC	7 cut(s)	667, 914, 1080, 1093, 1202, 1333, 1901
BspT107I	GGYRCC	1 cut(s)	1488
BspTNI	GGTCTC	2 cut(s)	576, 588
BsrDI	GCAATG	5 cut(s)	293, 540, 638, 1390, 1794
BsrFI	RCCGGY	1 cut(s)	1938
BsrGI	TGTACA	1 cut(s)	537
BsrI	ACTGG	4 cut(s)	190, 572, 1278, 1954
BssAI	RCCGGY	1 cut(s)	1938
BssECI	CCNNGG	8 cut(s)	406, 433, 946, 1211, 1359, 1515, 1771, 1924
BssNI	GRCGYC	1 cut(s)	1031
BssT1I	CCWWGG	3 cut(s)	1211, 1359, 1515
Bst2UI	CCWGG	7 cut(s)	278, 408, 617, 1268, 1323, 1629, 1926
Bst4CI	ACNGT	7 cut(s)	156, 326, 389, 1082, 1561, 1960, 2173
Bst6I	CTCTTC	5 cut(s)	37, 82, 604, 1032, 1647
BstACI	GRCGYC	1 cut(s)	1031
BstAPI	GCANNNNNTGC	3 cut(s)	1425, 1553, 1910
BstAUI	TGTACA	1 cut(s)	537
BstBAI	YACGTR	1 cut(s)	1280
BstC8I	GCNNGC	4 cut(s)	202, 223, 344, 2297
BstDEI	CTNAG	7 cut(s)	453, 522, 1137, 1596, 2041, 2249, 2256
BstEII	GGTNACC	1 cut(s)	1919
BstENI	CCTNNNNNAGG	1 cut(s)	1446
BstF5I	GGATG	3 cut(s)	823, 1501, 2293
BstFNI	CGCG	1 cut(s)	473
BstMAI	GTCTC	8 cut(s)	167, 576, 588, 614, 1193, 1344, 1586, 2368
BstMCI	CGRYCG	1 cut(s)	258
BstNI	CCWGG	7 cut(s)	278, 408, 617, 1268, 1323, 1629, 1926
BstNSI	RCATGY	2 cut(s)	729, 2363
BstPI	GGTNACC	1 cut(s)	1919
BstSFI	CTRYAG	3 cut(s)	1044, 1257, 1560
BstSLI	GKGCMC	3 cut(s)	1256, 1493, 2205
BstUI	CGCG	1 cut(s)	473
BstV2I	GAAGAC	4 cut(s)	639, 671, 705, 1840
BstX2I	RGATCY	4 cut(s)	919, 1072, 1207, 1906
BstYI	RGATCY	4 cut(s)	919, 1072, 1207, 1906
BstZI	CGGCCG	1 cut(s)	255
BsuI	GTATCC	3 cut(s)	345, 962, 1863
BsuRI	GGCC	8 cut(s)	53, 119, 189, 257, 405, 615, 1452, 1484
BtrI	CACGTC	2 cut(s)	1804, 1848
BtsCI	GGATG	3 cut(s)	823, 1501, 2293
BtsI	GCAGTG	5 cut(s)	801, 1122, 1254, 1328, 1509
BtsIMutI	CAGTG	7 cut(s)	331, 801, 1122, 1254, 1328, 1509, 1947
Cac8I	GCNNGC	4 cut(s)	202, 223, 344, 2297
CaiI	CAGNNNCTG	3 cut(s)	289, 1273, 1910
CciI	TCATGA	1 cut(s)	1603
Cfr10I	RCCGGY	1 cut(s)	1938
Cfr13I	GGNCC	6 cut(s)	274, 404, 1238, 1373, 1676, 1876
CseI	GACGC	3 cut(s)	462, 1039, 1175
CsiI	ACCWGGT	1 cut(s)	276
Csp6I	GTAC	3 cut(s)	361, 397, 538
CspAI	ACCGGT	1 cut(s)	1938
CspCI	CAANNNNNGTGG	6 cut(s)	1459, 1461, 1494, 1496, 2140, 2175
CviQI	GTAC	3 cut(s)	361, 397, 538
DdeI	CTNAG	7 cut(s)	453, 522, 1137, 1596, 2041, 2249, 2256
DraIII	CACNNNGTG	1 cut(s)	391
DrdI	GACNNNNNNGTC	2 cut(s)	472, 568
DriI	GACNNNNNGTC	1 cut(s)	1599
DseDI	GACNNNNNNGTC	2 cut(s)	472, 568
EaeI	YGGCCR	3 cut(s)	187, 255, 1482
EagI	CGGCCG	1 cut(s)	255
Eam1104I	CTCTTC	5 cut(s)	37, 82, 604, 1032, 1647
Eam1105I	GACNNNNNGTC	1 cut(s)	1599
EarI	CTCTTC	5 cut(s)	37, 82, 604, 1032, 1647
EciI	GGCGGA	1 cut(s)	287
Ecl136II	GAGCTC	1 cut(s)	177
EclXI	CGGCCG	1 cut(s)	255
Eco130I	CCWWGG	3 cut(s)	1211, 1359, 1515
Eco147I	AGGCCT	2 cut(s)	119, 1452
Eco24I	GRGCYC	1 cut(s)	179
Eco31I	GGTCTC	2 cut(s)	576, 588
Eco32I	GATATC	2 cut(s)	1717, 2125
Eco47I	GGWCC	5 cut(s)	274, 1238, 1373, 1676, 1876
Eco52I	CGGCCG	1 cut(s)	255
Eco53kI	GAGCTC	1 cut(s)	177
Eco57I	CTGAAG	2 cut(s)	1056, 1674
Eco72I	CACGTG	1 cut(s)	1280
Eco88I	CYCGRG	1 cut(s)	598
Eco91I	GGTNACC	1 cut(s)	1919
EcoICRI	GAGCTC	1 cut(s)	177
EcoNI	CCTNNNNNAGG	1 cut(s)	1446
EcoO109I	RGGNCCY	3 cut(s)	1373, 1676, 1876
EcoO65I	GGTNACC	1 cut(s)	1919
EcoRII	CCWGG	7 cut(s)	276, 406, 615, 1266, 1321, 1627, 1924
EcoRV	GATATC	2 cut(s)	1717, 2125
EcoT14I	CCWWGG	3 cut(s)	1211, 1359, 1515
EcoT22I	ATGCAT	1 cut(s)	1969
EcoT38I	GRGCYC	1 cut(s)	179
ErhI	CCWWGG	3 cut(s)	1211, 1359, 1515
Esp3I	CGTCTC	1 cut(s)	1193
FalI	AAGNNNNNCTT	2 cut(s)	1113, 1145
FaqI	GGGAC	4 cut(s)	416, 1140, 1359, 1862
FauNDI	CATATG	1 cut(s)	1225
FblI	GTMKAC	2 cut(s)	1002, 1869
FokI	GGATG	3 cut(s)	830, 1508, 2300
FriOI	GRGCYC	1 cut(s)	179
FspBI	CTAG	8 cut(s)	414, 423, 528, 870, 1076, 1094, 2114, 2321
GsuI	CTGGAG	2 cut(s)	1305, 1722
HaeIII	GGCC	8 cut(s)	53, 119, 189, 257, 405, 615, 1452, 1484
HapII	CCGG	7 cut(s)	186, 435, 626, 1485, 1493, 1773, 1939
HgaI	GACGC	3 cut(s)	462, 1039, 1175
Hin1I	GRCGYC	1 cut(s)	1031
HincII	GTYRAC	2 cut(s)	519, 775
HindII	GTYRAC	2 cut(s)	519, 775
HindIII	AAGCTT	1 cut(s)	1860
HinfI	GANTC	5 cut(s)	622, 989, 1600, 1611, 2188
HpaII	CCGG	7 cut(s)	186, 435, 626, 1485, 1493, 1773, 1939
HphI	GGTGA	7 cut(s)	331, 907, 1586, 1711, 1964, 1994, 2149
Hpy166II	GTNNAC	9 cut(s)	94, 322, 519, 734, 775, 1003, 1254, 1870, 2203
Hpy188I	TCNGA	3 cut(s)	376, 593, 947
Hpy188III	TCNNGA	7 cut(s)	663, 854, 923, 1076, 1312, 1604, 1701
Hpy8I	GTNNAC	9 cut(s)	94, 322, 519, 734, 775, 1003, 1254, 1870, 2203
Hpy99I	CGWCG	2 cut(s)	404, 478
HpyAV	CCTTC	9 cut(s)	37, 109, 501, 796, 938, 1103, 1409, 1923, 2005
HpyCH4III	ACNGT	7 cut(s)	156, 326, 389, 1082, 1561, 1960, 2173
HpyCH4IV	ACGT	5 cut(s)	311, 399, 1279, 1803, 1847
HpyF3I	CTNAG	7 cut(s)	453, 522, 1137, 1596, 2041, 2249, 2256
HpySE526I	ACGT	5 cut(s)	311, 399, 1279, 1803, 1847
Hsp92I	GRCGYC	1 cut(s)	1031
LmnI	GCTCC	6 cut(s)	89, 333, 437, 1112, 1324, 1787
LweI	GCATC	5 cut(s)	250, 1173, 1516, 1543, 1676
MabI	ACCWGGT	1 cut(s)	276
MaeI	CTAG	8 cut(s)	414, 423, 528, 870, 1076, 1094, 2114, 2321
MaeII	ACGT	5 cut(s)	311, 399, 1279, 1803, 1847
MaeIII	GTNAC	8 cut(s)	146, 650, 799, 976, 1132, 1387, 1919, 1952
MfeI	CAATTG	2 cut(s)	760, 1587
MflI	RGATCY	4 cut(s)	919, 1072, 1207, 1906
MhlI	GDGCHC	5 cut(s)	179, 1256, 1493, 2020, 2205
MluCI	AATT	4 cut(s)	760, 1168, 1587, 1743
MlyI	GAGTC	3 cut(s)	616, 1609, 2197
MmeI	TCCRAC	1 cut(s)	354
Mph1103I	ATGCAT	1 cut(s)	1969
MseI	TTAA	2 cut(s)	582, 714
MslI	CAYNNNNRTG	3 cut(s)	1181, 1895, 2304
MspI	CCGG	7 cut(s)	186, 435, 626, 1485, 1493, 1773, 1939
MunI	CAATTG	2 cut(s)	760, 1587
Mva1269I	GAATGC	2 cut(s)	1321, 1752
MvaI	CCWGG	7 cut(s)	278, 408, 617, 1268, 1323, 1629, 1926
MvnI	CGCG	1 cut(s)	473
NciI	CCSGG	5 cut(s)	435, 627, 1486, 1493, 1773
NdeI	CATATG	1 cut(s)	1225
NlaIV	GGNNCC	3 cut(s)	1375, 1490, 1878
NmeAIII	GCCGAG	1 cut(s)	1170
NmuCI	GTSAC	2 cut(s)	1387, 1952
NsiI	ATGCAT	1 cut(s)	1969
NspI	RCATGY	2 cut(s)	729, 2363
OliI	CACNNNNGTG	1 cut(s)	2304
PagI	TCATGA	1 cut(s)	1603
PceI	AGGCCT	2 cut(s)	119, 1452
PcsI	WCGNNNNNNNCGW	2 cut(s)	204, 1410
PctI	GAATGC	2 cut(s)	1321, 1752
PfeI	GAWTC	2 cut(s)	989, 1611
Pfl23II	CGTACG	1 cut(s)	396
PflFI	GACNNNGTC	1 cut(s)	1874
PflMI	CCANNNNNTGG	1 cut(s)	1273
PfoI	TCCNGGA	3 cut(s)	625, 1321, 1627
PinAI	ACCGGT	1 cut(s)	1938
PleI	GAGTC	3 cut(s)	616, 1608, 2196
PmaCI	CACGTG	1 cut(s)	1280
PmlI	CACGTG	1 cut(s)	1280
PpsI	GAGTC	3 cut(s)	616, 1608, 2196
Ppu21I	YACGTR	1 cut(s)	1280
PpuMI	RGGWCCY	3 cut(s)	1373, 1676, 1876
Psp124BI	GAGCTC	1 cut(s)	179
Psp5II	RGGWCCY	3 cut(s)	1373, 1676, 1876
Psp6I	CCWGG	7 cut(s)	276, 406, 615, 1266, 1321, 1627, 1924
PspCI	CACGTG	1 cut(s)	1280
PspEI	GGTNACC	1 cut(s)	1919
PspGI	CCWGG	7 cut(s)	276, 406, 615, 1266, 1321, 1627, 1924
PspLI	CGTACG	1 cut(s)	396
PspN4I	GGNNCC	3 cut(s)	1375, 1490, 1878
PspPI	GGNCC	6 cut(s)	274, 404, 1238, 1373, 1676, 1876
PspPPI	RGGWCCY	3 cut(s)	1373, 1676, 1876
PsrI	GAACNNNNNNTAC	2 cut(s)	1004, 1036
PstI	CTGCAG	2 cut(s)	1048, 1261
PstNI	CAGNNNCTG	3 cut(s)	289, 1273, 1910
PsuI	RGATCY	4 cut(s)	919, 1072, 1207, 1906
PsyI	GACNNNGTC	1 cut(s)	1874
RsaI	GTAC	3 cut(s)	362, 398, 539
RsaNI	GTAC	3 cut(s)	361, 397, 538
RseI	CAYNNNNRTG	3 cut(s)	1181, 1895, 2304
SacI	GAGCTC	1 cut(s)	179
SaqAI	TTAA	2 cut(s)	582, 714
Sau96I	GGNCC	6 cut(s)	274, 404, 1238, 1373, 1676, 1876
SchI	GAGTC	3 cut(s)	616, 1609, 2197
SduI	GDGCHC	5 cut(s)	179, 1256, 1493, 2020, 2205
SexAI	ACCWGGT	1 cut(s)	276
SfaNI	GCATC	5 cut(s)	250, 1173, 1516, 1543, 1676
SfcI	CTRYAG	3 cut(s)	1044, 1257, 1560
SinI	GGWCC	5 cut(s)	274, 1238, 1373, 1676, 1876
SmiMI	CAYNNNNRTG	3 cut(s)	1181, 1895, 2304
SmlI	CTYRAG	3 cut(s)	47, 1310, 2302
SmoI	CTYRAG	3 cut(s)	47, 1310, 2302
Sse9I	AATT	4 cut(s)	760, 1168, 1587, 1743
SseBI	AGGCCT	2 cut(s)	119, 1452
SsiI	CCGC	7 cut(s)	204, 213, 254, 272, 468, 471, 2005
SspMI	CTAG	8 cut(s)	414, 423, 528, 870, 1076, 1094, 2114, 2321
SstI	GAGCTC	1 cut(s)	179
StuI	AGGCCT	2 cut(s)	119, 1452
StyI	CCWWGG	3 cut(s)	1211, 1359, 1515
TaaI	ACNGT	7 cut(s)	156, 326, 389, 1082, 1561, 1960, 2173
TaiI	ACGT	5 cut(s)	314, 402, 1282, 1806, 1850
TaqI	TCGA	4 cut(s)	1614, 2014, 2094, 2186
TasI	AATT	4 cut(s)	760, 1168, 1587, 1743
TatI	WGTACW	1 cut(s)	537
TauI	GCSGC	3 cut(s)	207, 257, 473
TfiI	GAWTC	2 cut(s)	989, 1611
Tru1I	TTAA	2 cut(s)	582, 714
Tru9I	TTAA	2 cut(s)	582, 714
TscAI	CASTG	7 cut(s)	331, 801, 1122, 1261, 1335, 1516, 1954
TseFI	GTSAC	2 cut(s)	1387, 1952
Tsp45I	GTSAC	2 cut(s)	1387, 1952
TspDTI	ATGAA	2 cut(s)	17, 1907
TspGWI	ACGGA	1 cut(s)	672
TspRI	CASTG	7 cut(s)	331, 801, 1122, 1261, 1335, 1516, 1954
Tth111I	GACNNNGTC	1 cut(s)	1874
Van91I	CCANNNNNTGG	1 cut(s)	1273
VneI	GTGCAC	2 cut(s)	1252, 2201
VpaK11BI	GGWCC	5 cut(s)	274, 1238, 1373, 1676, 1876
XagI	CCTNNNNNAGG	1 cut(s)	1446
XbaI	TCTAGA	1 cut(s)	1075
XceI	RCATGY	2 cut(s)	729, 2363
XcmI	CCANNNNNNNNNTGG	4 cut(s)	363, 508, 1357, 1477
XmiI	GTMKAC	2 cut(s)	1002, 1869
XspI	CTAG	8 cut(s)	414, 423, 528, 870, 1076, 1094, 2114, 2321
Zsp2I	ATGCAT	1 cut(s)	1969

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.