Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0003333

Physical Location & Seq

Genomic Coordinates Forward (+)

21101546 .. 21105307

Gene Structure 3762 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000001806

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2340 bp

ATGGCCTCCTCCTTTCTCTGTTCCTCTGTTCAGAACAGAATACTTCAATACAGAGCAGTGCCGAAGGCCTTGCTCTGTTTCACTCTTTGTTACATACTGTTGTTATCTCTCTCTGTGAGCTCAGTTTCCGGCCAGTCGTTTGCCTGCGGCGACGGTGCCAGCAGCTTCCCGTTCTGCGACAAGTCGTTGGCGGCCGATGCGCGGGTGGCGGACCTGGTGCAGAGGCTGACATTGCAGGAGAAGACTACATTTCTGGTGGACAGTGCAGGGAATGTGAGCAGGCTTGGAATACCCAACTACCAGTGGTGGTCGGAGGCTTTACACGGAGTGTCGTCCATCGGCCGCCCGGGGGCCAAATATTCTACTGACATTCCGGGAGCTACCAGCTTCCCTCAGCCCATTTTGACCGCCGCGTCGTTCAACAACTCCCTCTACGAAGCCATTGGAAGGGTGGTGTCAACTGAGGCCAGAGCAATGTACAATATGGGATTGGCAGGATTGACATTCTGGGCCCCAAACATTAACATTTTCCGAGACCCGAGATGGGGAAGAGGCCAGGAGACTCCGGGAGAAGATCCATTGCTCACGAGTAACTACAGTTCGGGATACGTTAGAGGTCTTCAACAAACCGATAGCGAAGACAAAAACAGGCTTAAAGTTGCAGCATGCTGTAAACATTATACAGCCTATGATTTGGACCATTGGAACGGATACGACAGATATACCTTCAATGCAGTGGTAACAAAACAAGATATGGATGATACATTTCAACCACCATTCAGAAGTTGTGTTCTTGATGGGAATGCTGCTAGTGTCATGTGTTCATACCAACAGGTTAATGGAAAACCAACCTGCGCAGACCCAGACCTTCTTTCTGGGGTTATCCGAGGCGAATGGAAGTTGAATGGATACATAGTCACCGATTGTGATTCAATAGAGGTGTACTACGACAACCAAACCTACACCAAGACACCAGAAGAAGCTGCAGCTACGGCTATATTGGCAGGAGTGGATCTTGACTGTGGATTTTTCCTAAGCAATTACACAGAAGGAGCAGTGAGAGGAGGACTTATAACTGAGGCAGCCATTGACAAGGCCATCACAAACAATTTTGGCACTTTGATGCGTCTAGGCTTCTTCGATGGTGATCCAAGCAAGCAACCATATGGAGATCTCGGTCCAAAGGATGTGTGCACTCCAGAGAACCAGGAGCTGGCACGTGAAACCGCGAGACAAGGGATCGTGTTGCTCAAGAACACTCCAGGATCACTGCCCCTGTCTCCAACAGCCATCAAATCCTTGGCAGTTATAGGTCCCAATAGCAATGCCACAAACACTATGATTGGCAACTACGCAGGCACCCCTTGCAACTATACAACTCCTTTGCAAGGCCTAACAGCCGTAGTTTCCACAACTTTGGTGGCCGGGTGCGTTGATGTGGCTTGTGGCACTGCCCAGGTAGATGATGCTACCAAGTTAGCAGCCACAGCAGATGCAACTGTACTTATAGTGGGTGCAGATCTATCATTAGAGGCAGAGAGTCATGATAGAACCGACCTCTATCTTCCAGGACAGCAAACTCTTCTAATAACTGAAGTAGCGAAGGCTTCTAAAGGACCTGTAATCCTTGTCATAATGTCTGGAGGAGGGTTCGATATTACCTTTGCAAAAAATGATGATAAAATTACAAGCATTCTATGGGTTGGTTACCCCGGCGAAGCTGGTGGAGCTGCCATTGCTGACGTTATTTTTGGCTTTTATAATCCAAGTGGAAGACTACCCATGACGTGGTATCCACAAGCTTATTTAGACAAGGTCCCTATGACAAACATGAATATGAGACCTGATCCTGCCAGTGGATACCCGGGCAGGACATACCGGTTTTACACTGGTGACACGGTTTATGCATTTGGATACGGAATAAGCTACTCCACCTTCAATCACAGCCTAGTTCGAGCACTGAAGCAAGTTTCCATTCCCTTAGAGGAGGATCATGTATGCCACTCATCAAGTTGCCAATCACTTGATGTTGTAGAAGAAAGGTGTCAAAATCTAGCTTTCGATATCCATTTGGGGGTGAAAAACATGGGCAAAATGAGTGGAAGTCATACAGTCTTATTGTATTCGAGTCCTCCATCTGTGCACAATTCTCCTAAAAAGCACTTGTTGGGATTCGAGAAGGTGTTCCTTAGCTCTCAGGGAGAAGCATTGGTCAAGTTCAATGTGGATGTTTGCAAGCACTTGAGTGTGGTTGATGAGCGAGGAAATAGGAAAGTTGCTTTGGGAGATCATGTACTACATGTTGGAGACTTGAAACAGACATTGAGTGTGAGGATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0002376 GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005576 GO:0005618 GO:0005623 GO:0005975 GO:0005976 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009044 GO:0009056 GO:0009057 GO:0009605 GO:0009607 GO:0009627 GO:0009814 GO:0009987 GO:0010383 GO:0010410 GO:0016052 GO:0016787 GO:0016798 GO:0030312 GO:0031221 GO:0031222 GO:0043170 GO:0043207 GO:0044036 GO:0044237 GO:0044238 GO:0044260 GO:0044464 GO:0045087 GO:0045491 GO:0045493 GO:0046556 GO:0048046 GO:0050896 GO:0051704 GO:0051707 GO:0071554 GO:0071704 GO:0071944 GO:0097599 GO:0098542 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00520 ko01100 map00520 map01100

Pfam Domains

Protein Families

Fn3-like Glyco_hydro_3 Glyco_hydro_3_C

Protein Analysis

780

Amino Acids

84.21

Weight (kDa)

5.46

Isoelectric Point (pI)

33.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_3	PF00933	126 - 367	3e-33	Glycosyl hydrolase family 3 N terminal domain
Glyco_hydro_3_C	PF01915	414 - 643	5.1e-50	Glycosyl hydrolase family 3 C-terminal domain
Fn3-like	PF14310	703 - 770	1.3e-10	Fibronectin type III-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003333)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G09730 AT5G64570 AT5G64570 AT5G64570
fragaria_vesca	FvH4_5g30690 FvH4_5g30710 FvH4_5g30710 FvH4_5g30710 FvH4_5g30710
malus_domestica	MD08G1221800.v1.1 MD15G1414100.v1.1
prunus_persica	Prupe.1G559400_v2.0.a1 Prupe.1G559400_v2.0.a1
pyrus_communis	pycom08g19240 pycom15g36840
rosa_chinensis	RchiOBHm_Chr7g0225551 RchiOBHm_Chr7g0225581
rosa_laevigata	RLG00000001804 RLG00000001806
rosa_multiflora	Rmu_co8377913.1_g000001 Rmu_sc0003876.1_g000021 Rmu_sc0006321.1_g000006
rosa_roxburghii	Rroxscaffold_3G00233670 Rroxscaffold_3G00233690
rosa_rugosa	Rorug07G0231600 Rorug07G0231800
rosa_samantha	Rh7AG372300 Rh7AG372500 Rh7BG365400 Rh7BG365500 Rh7CG390600 Rh7CG390800 Rh7DG376200 Rh7DG376300
rosa_wichuraiana	Rw7G031750 Rw7G031760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1073, 1761
AasI	GACNNNNNNGTC	1 cut(s)	412
Acc16I	TGCGCA	1 cut(s)	856
Acc36I	ACCTGC	1 cut(s)	860
AccB1I	GGYRCC	2 cut(s)	155, 1358
AccB7I	CCANNNNNTGG	2 cut(s)	1213, 1788
AccII	CGCG	3 cut(s)	202, 413, 1229
AciI	CCGC	8 cut(s)	147, 191, 202, 209, 343, 408, 411, 1227
AclWI	GGATC	7 cut(s)	569, 1020, 1142, 1247, 1273, 1841, 1998
AcoI	YGGCCR	4 cut(s)	130, 192, 340, 1422
AcuI	CTGAAG	2 cut(s)	1614, 1982
AcvI	CACGTG	1 cut(s)	1220
AdeI	CACNNNGTG	1 cut(s)	328
AfaI	GTAC	4 cut(s)	479, 944, 1503, 2295
AflIII	ACRYGT	1 cut(s)	2299
AgeI	ACCGGT	1 cut(s)	1878
AjiI	CACGTC	1 cut(s)	1788
AjnI	CCWGG	6 cut(s)	213, 555, 1206, 1261, 1455, 1567
AjuI	GAANNNNNNNTTGG	2 cut(s)	2264, 2296
AleI	CACNNNNGTG	1 cut(s)	2244
Alw21I	GWGCWC	4 cut(s)	122, 1196, 1960, 2145
Alw26I	GTCTC	6 cut(s)	528, 554, 1225, 1284, 1834, 2301
Alw44I	GTGCAC	2 cut(s)	1192, 2141
AlwI	GGATC	7 cut(s)	569, 1020, 1142, 1247, 1273, 1841, 1998
AlwNI	CAGNNNCTG	2 cut(s)	226, 1213
Ama87I	CYCGRG	3 cut(s)	346, 538, 1864
ApaI	GGGCCC	1 cut(s)	514
ApaLI	GTGCAC	2 cut(s)	1192, 2141
ApeKI	GCWGC	8 cut(s)	162, 662, 806, 983, 986, 1082, 1481, 1730
ArsI	GACNNNNNNTTYG	2 cut(s)	1733, 1765
AsiGI	ACCGGT	1 cut(s)	1878
Asp700I	GAANNNNTTC	1 cut(s)	2183
AspLEI	GCGC	2 cut(s)	202, 857
AspS9I	GGNCC	9 cut(s)	211, 351, 510, 511, 697, 1178, 1313, 1616, 1816
AsuC2I	CCSGG	8 cut(s)	347, 348, 375, 567, 1426, 1713, 1865, 1866
AsuHPI	GGTGA	4 cut(s)	910, 1157, 1904, 2089
AvaI	CYCGRG	3 cut(s)	346, 538, 1864
AvaII	GGWCC	6 cut(s)	211, 697, 1178, 1313, 1616, 1816
BaeGI	GKGCMC	3 cut(s)	514, 1196, 2145
BanI	GGYRCC	2 cut(s)	155, 1358
BanII	GRGCYC	2 cut(s)	122, 514
BauI	CACGAG	1 cut(s)	586
BbrPI	CACGTG	1 cut(s)	1220
BbsI	GAAGAC	4 cut(s)	248, 611, 645, 1780
Bbv12I	GWGCWC	4 cut(s)	122, 1196, 1960, 2145
BbvCI	CCTCAGC	1 cut(s)	393
BbvI	GCAGC	8 cut(s)	174, 674, 793, 970, 998, 1094, 1493, 1717
BccI	CCATC	7 cut(s)	344, 537, 791, 1106, 1136, 1298, 2143
BceAI	ACGGC	2 cut(s)	1008, 1385
BcgI	CGANNNNNNTGC	2 cut(s)	52, 86
BciT130I	CCWGG	6 cut(s)	215, 557, 1208, 1263, 1457, 1569
BciVI	GTATCC	6 cut(s)	599, 704, 902, 1803, 1853, 1907
BcnI	CCSGG	8 cut(s)	347, 348, 375, 567, 1426, 1713, 1865, 1866
BcoDI	GTCTC	6 cut(s)	528, 554, 1225, 1284, 1834, 2301
BfaI	CTAG	4 cut(s)	810, 1130, 1949, 2054
BfmI	CTRYAG	2 cut(s)	595, 984
BfuAI	ACCTGC	1 cut(s)	860
BfuI	GTATCC	6 cut(s)	599, 704, 902, 1803, 1853, 1907
BglII	AGATCT	2 cut(s)	1171, 1519
Bme18I	GGWCC	6 cut(s)	211, 697, 1178, 1313, 1616, 1816
BmeT110I	CYCGRG	3 cut(s)	346, 538, 1864
BmgBI	CACGTC	1 cut(s)	1788
BmgT120I	GGNCC	9 cut(s)	211, 351, 510, 511, 697, 1178, 1313, 1616, 1816
BmiI	GGNNCC	7 cut(s)	157, 352, 512, 513, 1315, 1360, 1818
BmsI	GCATC	4 cut(s)	187, 1113, 1456, 1483
BpiI	GAAGAC	4 cut(s)	248, 611, 645, 1780
BpmI	CTGGAG	3 cut(s)	1182, 1245, 1662
Bpu10I	CCTNAGC	3 cut(s)	393, 1034, 2189
BpuEI	CTTGAG	2 cut(s)	1235, 2263
BpuMI	CCSGG	8 cut(s)	347, 348, 375, 567, 1426, 1713, 1865, 1866
BsaAI	YACGTR	1 cut(s)	1220
BsaBI	GATNNNNATC	1 cut(s)	1146
BsaI	GGTCTC	2 cut(s)	528, 1834
BsaJI	CCNNGG	7 cut(s)	346, 347, 886, 1299, 1455, 1711, 1864
BsaWI	WCCGGW	1 cut(s)	1878
BsaXI	ACNNNNNCTCC	2 cut(s)	2277, 2307
Bse118I	RCCGGY	1 cut(s)	1878
Bse1I	ACTGG	4 cut(s)	133, 301, 1854, 1894
Bse3DI	GCAATG	5 cut(s)	230, 480, 578, 1330, 1734
Bse8I	GATNNNNATC	1 cut(s)	1146
BseBI	CCWGG	6 cut(s)	215, 557, 1208, 1263, 1457, 1569
BseDI	CCNNGG	7 cut(s)	346, 347, 886, 1299, 1455, 1711, 1864
BseGI	GGATG	3 cut(s)	763, 1192, 2233
BseJI	GATNNNNATC	1 cut(s)	1146
BseMI	GCAATG	5 cut(s)	230, 480, 578, 1330, 1734
BseMII	CTCAG	5 cut(s)	135, 407, 453, 1068, 2210
BseNI	ACTGG	4 cut(s)	133, 301, 1854, 1894
BseRI	GAGGAG	3 cut(s)	1077, 1659, 2000
BseSI	GKGCMC	3 cut(s)	514, 1196, 2145
BseX3I	CGGCCG	2 cut(s)	192, 340
BseXI	GCAGC	8 cut(s)	174, 674, 793, 970, 998, 1094, 1493, 1717
BsgI	GTGCAG	3 cut(s)	239, 285, 1536
Bsh1236I	CGCG	3 cut(s)	202, 413, 1229
Bsh1285I	CGRYCG	2 cut(s)	195, 343
BshNI	GGYRCC	2 cut(s)	155, 1358
BshTI	ACCGGT	1 cut(s)	1878
BsiEI	CGRYCG	2 cut(s)	195, 343
BsiHKAI	GWGCWC	4 cut(s)	122, 1196, 1960, 2145
BsiHKCI	CYCGRG	3 cut(s)	346, 538, 1864
BsiSI	CCGG	8 cut(s)	129, 347, 374, 566, 1425, 1713, 1865, 1879
BslFI	GGGAC	2 cut(s)	1299, 1802
BsmAI	GTCTC	6 cut(s)	528, 554, 1225, 1284, 1834, 2301
BsmFI	GGGAC	2 cut(s)	1299, 1802
BsmI	GAATGC	2 cut(s)	808, 1692
Bso31I	GGTCTC	2 cut(s)	528, 1834
BsoBI	CYCGRG	3 cut(s)	346, 538, 1864
Bsp120I	GGGCCC	1 cut(s)	510
Bsp1286I	GDGCHC	5 cut(s)	122, 514, 1196, 1960, 2145
Bsp1407I	TGTACA	1 cut(s)	477
BspACI	CCGC	8 cut(s)	147, 191, 202, 209, 343, 408, 411, 1227
BspCNI	CTCAG	5 cut(s)	134, 406, 454, 1069, 2209
BspFNI	CGCG	3 cut(s)	202, 413, 1229
BspHI	TCATGA	1 cut(s)	1543
BspLI	GGNNCC	7 cut(s)	157, 352, 512, 513, 1315, 1360, 1818
BspMAI	CTGCAG	1 cut(s)	988
BspMI	ACCTGC	1 cut(s)	860
BspPI	GGATC	7 cut(s)	569, 1020, 1142, 1247, 1273, 1841, 1998
BspT107I	GGYRCC	2 cut(s)	155, 1358
BspTNI	GGTCTC	2 cut(s)	528, 1834
BsrDI	GCAATG	5 cut(s)	230, 480, 578, 1330, 1734
BsrFI	RCCGGY	1 cut(s)	1878
BsrGI	TGTACA	1 cut(s)	477
BsrI	ACTGG	4 cut(s)	133, 301, 1854, 1894
BssAI	RCCGGY	1 cut(s)	1878
BssECI	CCNNGG	7 cut(s)	346, 347, 886, 1299, 1455, 1711, 1864
BssSI	CACGAG	1 cut(s)	586
BssT1I	CCWWGG	1 cut(s)	1299
Bst2BI	CACGAG	1 cut(s)	586
Bst2UI	CCWGG	6 cut(s)	215, 557, 1208, 1263, 1457, 1569
Bst4CI	ACNGT	8 cut(s)	99, 155, 263, 599, 1022, 1501, 1900, 2113
Bst6I	CTCTTC	2 cut(s)	544, 1587
BstAPI	GCANNNNNTGC	1 cut(s)	1365
BstAUI	TGTACA	1 cut(s)	477
BstBAI	YACGTR	1 cut(s)	1220
BstC8I	GCNNGC	8 cut(s)	145, 160, 281, 667, 1157, 1215, 1357, 2237
BstDEI	CTNAG	8 cut(s)	121, 393, 462, 1034, 1077, 1981, 2189, 2196
BstEII	GGTNACC	1 cut(s)	1706
BstENI	CCTNNNNNAGG	1 cut(s)	1386
BstF5I	GGATG	3 cut(s)	763, 1192, 2233
BstFNI	CGCG	3 cut(s)	202, 413, 1229
BstHHI	GCGC	2 cut(s)	202, 857
BstMAI	GTCTC	6 cut(s)	528, 554, 1225, 1284, 1834, 2301
BstMCI	CGRYCG	2 cut(s)	195, 343
BstMWI	GCNNNNNNNGC	9 cut(s)	197, 206, 232, 992, 1001, 1365, 1487, 1727, 1736
BstNI	CCWGG	6 cut(s)	215, 557, 1208, 1263, 1457, 1569
BstNSI	RCATGY	2 cut(s)	669, 2303
BstPI	GGTNACC	1 cut(s)	1706
BstSFI	CTRYAG	2 cut(s)	595, 984
BstSLI	GKGCMC	3 cut(s)	514, 1196, 2145
BstUI	CGCG	3 cut(s)	202, 413, 1229
BstV1I	GCAGC	8 cut(s)	174, 674, 793, 970, 998, 1094, 1493, 1717
BstV2I	GAAGAC	4 cut(s)	248, 611, 645, 1780
BstX2I	RGATCY	4 cut(s)	574, 1012, 1171, 1519
BstXI	CCANNNNNNTGG	1 cut(s)	1417
BstYI	RGATCY	4 cut(s)	574, 1012, 1171, 1519
BstZI	CGGCCG	2 cut(s)	192, 340
BsuI	GTATCC	6 cut(s)	599, 704, 902, 1803, 1853, 1907
BtrI	CACGTC	1 cut(s)	1788
BtsCI	GGATG	3 cut(s)	763, 1192, 2233
BtsI	GCAGTG	5 cut(s)	63, 741, 1062, 1268, 1449
BveI	ACCTGC	1 cut(s)	860
Cac8I	GCNNGC	8 cut(s)	145, 160, 281, 667, 1157, 1215, 1357, 2237
CaiI	CAGNNNCTG	2 cut(s)	226, 1213
CciI	TCATGA	1 cut(s)	1543
CfoI	GCGC	2 cut(s)	202, 857
Cfr10I	RCCGGY	1 cut(s)	1878
Cfr13I	GGNCC	9 cut(s)	211, 351, 510, 511, 697, 1178, 1313, 1616, 1816
Cfr9I	CCCGGG	2 cut(s)	346, 1864
CseI	GACGC	2 cut(s)	402, 1115
CsiI	ACCWGGT	1 cut(s)	213
Csp6I	GTAC	4 cut(s)	478, 943, 1502, 2294
CspAI	ACCGGT	1 cut(s)	1878
CspCI	CAANNNNNGTGG	4 cut(s)	1401, 1436, 2080, 2115
CviAII	CATG	9 cut(s)	666, 817, 1544, 1783, 1831, 1994, 2086, 2291, 2300
CviQI	GTAC	4 cut(s)	478, 943, 1502, 2294
DdeI	CTNAG	8 cut(s)	121, 393, 462, 1034, 1077, 1981, 2189, 2196
DraIII	CACNNNGTG	1 cut(s)	328
DrdI	GACNNNNNNGTC	1 cut(s)	412
DseDI	GACNNNNNNGTC	1 cut(s)	412
EaeI	YGGCCR	4 cut(s)	130, 192, 340, 1422
EagI	CGGCCG	2 cut(s)	192, 340
Eam1104I	CTCTTC	2 cut(s)	544, 1587
EarI	CTCTTC	2 cut(s)	544, 1587
EciI	GGCGGA	1 cut(s)	224
Ecl136II	GAGCTC	1 cut(s)	120
EclXI	CGGCCG	2 cut(s)	192, 340
Eco130I	CCWWGG	1 cut(s)	1299
Eco147I	AGGCCT	2 cut(s)	68, 1392
Eco24I	GRGCYC	2 cut(s)	122, 514
Eco31I	GGTCTC	2 cut(s)	528, 1834
Eco32I	GATATC	1 cut(s)	2065
Eco47I	GGWCC	6 cut(s)	211, 697, 1178, 1313, 1616, 1816
Eco52I	CGGCCG	2 cut(s)	192, 340
Eco53kI	GAGCTC	1 cut(s)	120
Eco57I	CTGAAG	2 cut(s)	1614, 1982
Eco72I	CACGTG	1 cut(s)	1220
Eco88I	CYCGRG	3 cut(s)	346, 538, 1864
Eco91I	GGTNACC	1 cut(s)	1706
EcoICRI	GAGCTC	1 cut(s)	120
EcoNI	CCTNNNNNAGG	1 cut(s)	1386
EcoO109I	RGGNCCY	4 cut(s)	511, 1313, 1616, 1816
EcoO65I	GGTNACC	1 cut(s)	1706
EcoRII	CCWGG	6 cut(s)	213, 555, 1206, 1261, 1455, 1567
EcoRV	GATATC	1 cut(s)	2065
EcoT14I	CCWWGG	1 cut(s)	1299
EcoT22I	ATGCAT	1 cut(s)	1909
EcoT38I	GRGCYC	2 cut(s)	122, 514
ErhI	CCWWGG	1 cut(s)	1299
FaeI	CATG	9 cut(s)	669, 820, 1547, 1786, 1834, 1997, 2089, 2294, 2303
FaqI	GGGAC	2 cut(s)	1299, 1802
FatI	CATG	9 cut(s)	665, 816, 1543, 1782, 1830, 1993, 2085, 2290, 2299
FauI	CCCGC	1 cut(s)	195
FauNDI	CATATG	1 cut(s)	1165
FokI	GGATG	3 cut(s)	770, 1199, 2240
FriOI	GRGCYC	2 cut(s)	122, 514
FspBI	CTAG	4 cut(s)	810, 1130, 1949, 2054
FspI	TGCGCA	1 cut(s)	856
GlaI	GCGC	2 cut(s)	201, 856
GsuI	CTGGAG	3 cut(s)	1182, 1245, 1662
HapII	CCGG	8 cut(s)	129, 347, 374, 566, 1425, 1713, 1865, 1879
HgaI	GACGC	2 cut(s)	402, 1115
HhaI	GCGC	2 cut(s)	202, 857
Hin1II	CATG	9 cut(s)	669, 820, 1547, 1786, 1834, 1997, 2089, 2294, 2303
Hin6I	GCGC	2 cut(s)	200, 855
HinP1I	GCGC	2 cut(s)	200, 855
HincII	GTYRAC	1 cut(s)	459
HindII	GTYRAC	1 cut(s)	459
HindIII	AAGCTT	1 cut(s)	1800
HinfI	GANTC	5 cut(s)	562, 929, 1540, 2128, 2172
HpaII	CCGG	8 cut(s)	129, 347, 374, 566, 1425, 1713, 1865, 1879
HphI	GGTGA	4 cut(s)	910, 1157, 1904, 2089
Hpy166II	GTNNAC	6 cut(s)	259, 459, 674, 943, 1194, 2143
Hpy188I	TCNGA	5 cut(s)	33, 313, 533, 782, 887
Hpy188III	TCNNGA	9 cut(s)	586, 603, 794, 1016, 1199, 1252, 1544, 1641, 2176
Hpy8I	GTNNAC	6 cut(s)	259, 459, 674, 943, 1194, 2143
Hpy99I	CGWCG	2 cut(s)	155, 418
HpyAV	CCTTC	8 cut(s)	58, 441, 736, 878, 1043, 1597, 1945, 2173
HpyCH4III	ACNGT	8 cut(s)	99, 155, 263, 599, 1022, 1501, 1900, 2113
HpyCH4IV	ACGT	4 cut(s)	609, 1219, 1743, 1787
HpyF10VI	GCNNNNNNNGC	9 cut(s)	197, 206, 232, 992, 1001, 1365, 1487, 1727, 1736
HpyF3I	CTNAG	8 cut(s)	121, 393, 462, 1034, 1077, 1981, 2189, 2196
HpySE526I	ACGT	4 cut(s)	609, 1219, 1743, 1787
Hsp92II	CATG	9 cut(s)	669, 820, 1547, 1786, 1834, 1997, 2089, 2294, 2303
HspAI	GCGC	2 cut(s)	200, 855
LmnI	GCTCC	4 cut(s)	377, 1052, 1210, 1727
Lsp1109I	GCAGC	8 cut(s)	174, 674, 793, 970, 998, 1094, 1493, 1717
LweI	GCATC	4 cut(s)	187, 1113, 1456, 1483
MabI	ACCWGGT	1 cut(s)	213
MaeI	CTAG	4 cut(s)	810, 1130, 1949, 2054
MaeII	ACGT	4 cut(s)	609, 1219, 1743, 1787
MaeIII	GTNAC	6 cut(s)	89, 590, 739, 916, 1706, 1892
MflI	RGATCY	4 cut(s)	574, 1012, 1171, 1519
MhlI	GDGCHC	5 cut(s)	122, 514, 1196, 1960, 2145
MluCI	AATT	4 cut(s)	1039, 1108, 1683, 2146
MlyI	GAGTC	3 cut(s)	556, 1549, 2137
MmeI	TCCRAC	3 cut(s)	291, 1307, 2284
Mph1103I	ATGCAT	1 cut(s)	1909
MroXI	GAANNNNTTC	1 cut(s)	2183
MseI	TTAA	3 cut(s)	522, 654, 837
MslI	CAYNNNNRTG	3 cut(s)	1121, 1835, 2244
MspI	CCGG	8 cut(s)	129, 347, 374, 566, 1425, 1713, 1865, 1879
Mva1269I	GAATGC	2 cut(s)	808, 1692
MvaI	CCWGG	6 cut(s)	215, 557, 1208, 1263, 1457, 1569
MvnI	CGCG	3 cut(s)	202, 413, 1229
MwoI	GCNNNNNNNGC	9 cut(s)	197, 206, 232, 992, 1001, 1365, 1487, 1727, 1736
NciI	CCSGG	8 cut(s)	347, 348, 375, 567, 1426, 1713, 1865, 1866
NdeI	CATATG	1 cut(s)	1165
NlaIII	CATG	9 cut(s)	669, 820, 1547, 1786, 1834, 1997, 2089, 2294, 2303
NlaIV	GGNNCC	7 cut(s)	157, 352, 512, 513, 1315, 1360, 1818
NmuCI	GTSAC	2 cut(s)	916, 1892
NsbI	TGCGCA	1 cut(s)	856
NsiI	ATGCAT	1 cut(s)	1909
NspI	RCATGY	2 cut(s)	669, 2303
OliI	CACNNNNGTG	1 cut(s)	2244
PaeI	GCATGC	1 cut(s)	669
PagI	TCATGA	1 cut(s)	1543
PceI	AGGCCT	2 cut(s)	68, 1392
PciI	ACATGT	1 cut(s)	2299
PctI	GAATGC	2 cut(s)	808, 1692
PdmI	GAANNNNTTC	1 cut(s)	2183
PfeI	GAWTC	2 cut(s)	929, 2172
PflFI	GACNNNGTC	1 cut(s)	1814
PflMI	CCANNNNNTGG	2 cut(s)	1213, 1788
PfoI	TCCNGGA	4 cut(s)	373, 565, 1261, 1567
PinAI	ACCGGT	1 cut(s)	1878
PleI	GAGTC	3 cut(s)	556, 1548, 2136
PmaCI	CACGTG	1 cut(s)	1220
PmlI	CACGTG	1 cut(s)	1220
PpsI	GAGTC	3 cut(s)	556, 1548, 2136
Ppu21I	YACGTR	1 cut(s)	1220
PpuMI	RGGWCCY	3 cut(s)	1313, 1616, 1816
PscI	ACATGT	1 cut(s)	2299
PsiI	TTATAA	2 cut(s)	1073, 1761
Psp124BI	GAGCTC	1 cut(s)	122
Psp5II	RGGWCCY	3 cut(s)	1313, 1616, 1816
Psp6I	CCWGG	6 cut(s)	213, 555, 1206, 1261, 1455, 1567
PspCI	CACGTG	1 cut(s)	1220
PspEI	GGTNACC	1 cut(s)	1706
PspGI	CCWGG	6 cut(s)	213, 555, 1206, 1261, 1455, 1567
PspN4I	GGNNCC	7 cut(s)	157, 352, 512, 513, 1315, 1360, 1818
PspOMI	GGGCCC	1 cut(s)	510
PspPI	GGNCC	9 cut(s)	211, 351, 510, 511, 697, 1178, 1313, 1616, 1816
PspPPI	RGGWCCY	3 cut(s)	1313, 1616, 1816
PsrI	GAACNNNNNNTAC	2 cut(s)	583, 615
PstI	CTGCAG	1 cut(s)	988
PstNI	CAGNNNCTG	2 cut(s)	226, 1213
PsuI	RGATCY	4 cut(s)	574, 1012, 1171, 1519
PsyI	GACNNNGTC	1 cut(s)	1814
RsaI	GTAC	4 cut(s)	479, 944, 1503, 2295
RsaNI	GTAC	4 cut(s)	478, 943, 1502, 2294
RseI	CAYNNNNRTG	3 cut(s)	1121, 1835, 2244
SacI	GAGCTC	1 cut(s)	122
SaqAI	TTAA	3 cut(s)	522, 654, 837
Sau96I	GGNCC	9 cut(s)	211, 351, 510, 511, 697, 1178, 1313, 1616, 1816
SchI	GAGTC	3 cut(s)	556, 1549, 2137
SduI	GDGCHC	5 cut(s)	122, 514, 1196, 1960, 2145
SexAI	ACCWGGT	1 cut(s)	213
SfaNI	GCATC	4 cut(s)	187, 1113, 1456, 1483
SfcI	CTRYAG	2 cut(s)	595, 984
SinI	GGWCC	6 cut(s)	211, 697, 1178, 1313, 1616, 1816
SmaI	CCCGGG	2 cut(s)	348, 1866
SmiMI	CAYNNNNRTG	3 cut(s)	1121, 1835, 2244
SmlI	CTYRAG	2 cut(s)	1250, 2242
SmoI	CTYRAG	2 cut(s)	1250, 2242
SphI	GCATGC	1 cut(s)	669
Sse9I	AATT	4 cut(s)	1039, 1108, 1683, 2146
SseBI	AGGCCT	2 cut(s)	68, 1392
SsiI	CCGC	8 cut(s)	147, 191, 202, 209, 343, 408, 411, 1227
SspI	AATATT	1 cut(s)	359
SspMI	CTAG	4 cut(s)	810, 1130, 1949, 2054
SstI	GAGCTC	1 cut(s)	122
StuI	AGGCCT	2 cut(s)	68, 1392
StyI	CCWWGG	1 cut(s)	1299
TaaI	ACNGT	8 cut(s)	99, 155, 263, 599, 1022, 1501, 1900, 2113
TaiI	ACGT	4 cut(s)	612, 1222, 1746, 1790
TaqI	TCGA	6 cut(s)	1140, 1653, 1954, 2061, 2126, 2175
TaqII	GACCGA	1 cut(s)	1166
TasI	AATT	4 cut(s)	1039, 1108, 1683, 2146
TatI	WGTACW	4 cut(s)	477, 942, 1501, 2293
TauI	GCSGC	4 cut(s)	150, 194, 345, 413
TfiI	GAWTC	2 cut(s)	929, 2172
Tru1I	TTAA	3 cut(s)	522, 654, 837
Tru9I	TTAA	3 cut(s)	522, 654, 837
TseFI	GTSAC	2 cut(s)	916, 1892
TseI	GCWGC	8 cut(s)	162, 662, 806, 983, 986, 1082, 1481, 1730
Tsp45I	GTSAC	2 cut(s)	916, 1892
TspDTI	ATGAA	2 cut(s)	813, 1847
TspGWI	ACGGA	3 cut(s)	339, 723, 1932
TspMI	CCCGGG	2 cut(s)	346, 1864
Tth111I	GACNNNGTC	1 cut(s)	1814
Van91I	CCANNNNNTGG	2 cut(s)	1213, 1788
VneI	GTGCAC	2 cut(s)	1192, 2141
VpaK11BI	GGWCC	6 cut(s)	211, 697, 1178, 1313, 1616, 1816
XagI	CCTNNNNNAGG	1 cut(s)	1386
XceI	RCATGY	2 cut(s)	669, 2303
XcmI	CCANNNNNNNNNTGG	4 cut(s)	448, 836, 1297, 1417
XmaI	CCCGGG	2 cut(s)	346, 1864
XmnI	GAANNNNTTC	1 cut(s)	2183
XspI	CTAG	4 cut(s)	810, 1130, 1949, 2054
Zsp2I	ATGCAT	1 cut(s)	1909

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.