Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0003333

Physical Location & Seq

Genomic Coordinates Reverse (-)

21600798 .. 21604855

Gene Structure 4058 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g30690.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2325 bp

ATGGCCTCCCCTGTTTTATGTTCCCCTGTTCAAAACAGGGCCTTGCTCTGGTTCTGTTTCACTATTTGCTACATACTGTTATGTCTCTGCTCTGTGAGCTCAGTTTCAGGCCAGTCGTATGCCTGCGGCGACGGGTTTAATGCCAGAAGCTTCCCGTTCTGCGACAAGTCGTTGGCGGTGGATGCGAGGGTGGCGGACCTGGTGCAGAGGCTGACATTGCAGGAGAAGATTACATTTCTGGTGGACGCAGCAGGGAATGTGAGCAGGCTTGGAATACCAACGTACCAATGGTGGTCGGAAGCGTTACACGGTGTGTCGAAAGTCGGCCGTGGAGGGACCAAGTTTACTGAACTCGTTCCCGGAGCAACCAGCTTTCCTCAGCCCATTTTGACGGCGGCGTCGTTCAACAACTCTCTCTTCGAAGCTATTGGAAGGGTGGTGTCAACTGAGGCCAGAGCAATGTACAATGTGGGATTGGCCGGATTGACATACTGGGCTCCTAACATTAACATTTTCCGAGACCCGAGATGGGGAAGAGGCCAGGAGACTCCGGGAGAAGATCCATTGCTCACTAGTAACTACGGGGCGGGATACGTTCGAGGTCTTCAACAAACTGATAGCCAAGACAAGAATAGGCTTAAAGTTGCAGCATGTTGTAAACATTATACAGCCTATGATTTGGACCATTGGAAAGGATATGACAGATACACCTTCAATGCAGTGGTTACACAACAAGATATGGAAGATACATTTCAACCACCATTGAAAAGTTGTGTCCTTGAGGGGAATGCTGCTAGTGTCATGTGTTCTTACCAACAGGTTAATGGAAAACCAACCTGCGCAGACCCGGACCTACTTTCTGGTGTAATCCGAGGCGAATGGAACTTGAATGGATACATAGTCACTGATTGTGATTCAATAGATGTGTACTACAACTACCAACATTACACCAAGACACCAGAAGAAGCTGCAGCTATGGGTATATTGGCAGGAGTGGATCTAGACTGTGGACCATACTTTGGAATGTATACAGAAGGAGCAGTGAAAGGGGGACTTGTGACTGAGGCAGCCATTGACAAGGCCATCACAAACAATTTCGGCACTTTGATGCGTCTAGGCTTCTTTGATGGTGATCCAAGCAAGCAACCATATGGAGATCTGGGTCCAAAAGATGTGTGTACTCCAGAGAACCAGGAGCTGGCACGTGAAACAGCGAGACAAGGGATAGTGTTGCTCAAGAACAGTGCAGGATCACTACCTCTGTCTCCCACAGCCATTAAATCCTTGGCAGTTATAGGTCCCAATGGCAATGCCACAGACACTATGATCGGCGACTATTTTGGCATCCCTTGCAAATATACATCTCCATTGCAAGGCCTAACAGCCGTAGTTCCTGCAACGTTTGTGGCAGGATGCCCTGATGTGGCCTGTGGCACTGCCCAGGTAGATGATGCTACCAAGTTAGCAGCAGCAGCAGATGCAACTGTAGTTATAGTGGGTGAAAATCAATTAATTGAGACAGAGAGTCATGATAGAACCGACCTCTATCTTCCAGGACAGCAAACTCTTCTAATATCTGAAGTAGCAAAGGCATCTAAAGGACCTGTAATCCTTGTCATAATGTCTGGAGGAGGGTACGATATCACCTTTGCGAAAAATGATGATAAAATTACAAGCATTCTTTGGGTTGGATACCCCGGCGAAGCTGGTGGAGCTGCCATTGCTGACGTGATTTTTGGCTTTTATAATCCAAGTGGAAGACTACCTATGACCTGGTATCCACAAGCTTATGTAGACAAGGTTCCTATGAATAACATGAATATGAGACCAGATCCTGCAAGTGGTTACCCCGGCAGGACTTACCGGTTTTACACTGGTGACACGGTTTATGAATTTGGACACGGATTAAGCTACTCCAACTTCAGTCACCGCCTAGTTCAAGCACCGAAGCAAGTTTCCATTCCCTTAGAGCAGGATCATGTATGCCACTCATCAAGTTGCCAATCACTTGATGTTGTCGAAGAAAGGTGCCAAAATCTAGCTTTTGATATTCATGTGGGGGTGAAAAACATGGGCAAAATGAGTGGAAGTCATACAGTGATATTGTATTCAAGCCCTCCATCAGTGCACAACGCGCCTAAAAAGCACTTGTTAGGATTTGAGAAGGTTTTCCTTAGCTCTCAGAAGGAAGCATTGGTCAAGTTCAATGTGGATGTTTGCAAGCACTTGAGTGTGGTTGATGAGTTAGGAAACAGGAAAGTTGCTTTGGGAGATCATGTACTGCATGTGGGAGACTTGAAGCAGACACTGAGTGTGAGGATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0002376 GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005576 GO:0005618 GO:0005623 GO:0005975 GO:0005976 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009044 GO:0009056 GO:0009057 GO:0009605 GO:0009607 GO:0009627 GO:0009814 GO:0009987 GO:0010383 GO:0010410 GO:0016052 GO:0016787 GO:0016798 GO:0030312 GO:0031221 GO:0031222 GO:0043170 GO:0043207 GO:0044036 GO:0044237 GO:0044238 GO:0044260 GO:0044464 GO:0045087 GO:0045491 GO:0045493 GO:0046556 GO:0048046 GO:0050896 GO:0051704 GO:0051707 GO:0071554 GO:0071704 GO:0071944 GO:0097599 GO:0098542 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00520 ko01100 map00520 map01100

Pfam Domains

Protein Families

Fn3-like Glyco_hydro_3 Glyco_hydro_3_C

Protein Analysis

775

Amino Acids

83.91

Weight (kDa)

5.57

Isoelectric Point (pI)

34.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_3	PF00933	120 - 362	3.8e-33	Glycosyl hydrolase family 3 N terminal domain
Glyco_hydro_3_C	PF01915	409 - 638	3.2e-51	Glycosyl hydrolase family 3 C-terminal domain
Fn3-like	PF14310	698 - 765	2.5e-10	Fibronectin type III-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0003333)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G09730 AT5G64570 AT5G64570 AT5G64570
fragaria_vesca	FvH4_5g30690 FvH4_5g30710 FvH4_5g30710 FvH4_5g30710 FvH4_5g30710
malus_domestica	MD08G1221800.v1.1 MD15G1414100.v1.1
prunus_persica	Prupe.1G559400_v2.0.a1 Prupe.1G559400_v2.0.a1
pyrus_communis	pycom08g19240 pycom15g36840
rosa_chinensis	RchiOBHm_Chr7g0225551 RchiOBHm_Chr7g0225581
rosa_laevigata	RLG00000001804 RLG00000001806
rosa_multiflora	Rmu_co8377913.1_g000001 Rmu_sc0003876.1_g000021 Rmu_sc0006321.1_g000006
rosa_roxburghii	Rroxscaffold_3G00233670 Rroxscaffold_3G00233690
rosa_rugosa	Rorug07G0231600 Rorug07G0231800
rosa_samantha	Rh7AG372300 Rh7AG372500 Rh7BG365400 Rh7BG365500 Rh7CG390600 Rh7CG390800 Rh7DG376200 Rh7DG376300
rosa_wichuraiana	Rw7G031750 Rw7G031760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1746
AasI	GACNNNNNNGTC	1 cut(s)	397
Acc16I	TGCGCA	1 cut(s)	841
Acc36I	ACCTGC	1 cut(s)	845
AccB1I	GGYRCC	1 cut(s)	2028
AccB7I	CCANNNNNTGG	2 cut(s)	1019, 1198
AccI	GTMKAC	2 cut(s)	1028, 1794
AccII	CGCG	1 cut(s)	2135
AciI	CCGC	6 cut(s)	126, 176, 194, 395, 587, 1930
AclI	AACGTT	1 cut(s)	1400
AclWI	GGATC	6 cut(s)	554, 1005, 1127, 1258, 1826, 1983
AcoI	YGGCCR	2 cut(s)	325, 477
AcsI	RAATTY	1 cut(s)	1892
AcuI	CTGAAG	2 cut(s)	1599, 1906
AcvI	CACGTG	1 cut(s)	1205
AcyI	GRCGYC	1 cut(s)	398
AdeI	CACNNNGTG	2 cut(s)	313, 2312
AfaI	GTAC	6 cut(s)	284, 464, 929, 1180, 1637, 2280
AfiI	CCNNNNNNNGG	8 cut(s)	48, 529, 530, 1019, 1198, 1373, 1423, 1841
AgeI	ACCGGT	1 cut(s)	1863
AhdI	GACNNNNNGTC	1 cut(s)	1524
AhlI	ACTAGT	1 cut(s)	572
AjiI	CACGTC	1 cut(s)	1729
AjnI	CCWGG	6 cut(s)	198, 540, 1191, 1440, 1552, 1772
AjuI	GAANNNNNNNTTGG	4 cut(s)	2177, 2209, 2249, 2281
AleI	CACNNNNGTG	1 cut(s)	2229
Alw21I	GWGCWC	2 cut(s)	101, 2130
Alw26I	GTCTC	8 cut(s)	89, 513, 539, 1210, 1269, 1511, 1819, 2286
Alw44I	GTGCAC	1 cut(s)	2126
AlwI	GGATC	6 cut(s)	554, 1005, 1127, 1258, 1826, 1983
AlwNI	CAGNNNCTG	4 cut(s)	211, 1198, 1835, 2308
Ama87I	CYCGRG	1 cut(s)	523
ApaLI	GTGCAC	1 cut(s)	2126
ApoI	RAATTY	1 cut(s)	1892
ArsI	GACNNNNNNTTYG	2 cut(s)	1718, 1750
AseI	ATTAAT	1 cut(s)	1511
AsiGI	ACCGGT	1 cut(s)	1863
Asp700I	GAANNNNTTC	2 cut(s)	354, 2168
AspLEI	GCGC	2 cut(s)	842, 2137
AspS9I	GGNCC	9 cut(s)	39, 196, 336, 682, 850, 1010, 1163, 1298, 1601
AsuC2I	CCSGG	5 cut(s)	360, 552, 848, 1698, 1851
AsuHPI	GGTGA	6 cut(s)	1142, 1511, 1636, 1889, 1919, 2074
AsuII	TTCGAA	1 cut(s)	420
AvaI	CYCGRG	1 cut(s)	523
AvaII	GGWCC	8 cut(s)	196, 336, 682, 850, 1010, 1163, 1298, 1601
BaeGI	GKGCMC	1 cut(s)	2130
BaeI	ACNNNNGTAYC	2 cut(s)	266, 299
BanI	GGYRCC	1 cut(s)	2028
BanII	GRGCYC	2 cut(s)	101, 499
BbrPI	CACGTG	1 cut(s)	1205
BbsI	GAAGAC	2 cut(s)	596, 1765
Bbv12I	GWGCWC	2 cut(s)	101, 2130
BbvCI	CCTCAGC	1 cut(s)	378
BccI	CCATC	4 cut(s)	522, 1091, 1121, 2128
BceAI	ACGGC	3 cut(s)	312, 408, 1370
BciT130I	CCWGG	6 cut(s)	200, 542, 1193, 1442, 1554, 1774
BciVI	GTATCC	4 cut(s)	584, 887, 1685, 1788
BcnI	CCSGG	5 cut(s)	360, 552, 848, 1698, 1851
BcoDI	GTCTC	8 cut(s)	89, 513, 539, 1210, 1269, 1511, 1819, 2286
BcuI	ACTAGT	1 cut(s)	572
BfaI	CTAG	6 cut(s)	573, 795, 1001, 1115, 1934, 2039
BfmI	CTRYAG	2 cut(s)	969, 1485
BfuAI	ACCTGC	1 cut(s)	845
BfuI	GTATCC	4 cut(s)	584, 887, 1685, 1788
BglII	AGATCT	1 cut(s)	1156
Bme18I	GGWCC	8 cut(s)	196, 336, 682, 850, 1010, 1163, 1298, 1601
BmeRI	GACNNNNNGTC	1 cut(s)	1524
BmeT110I	CYCGRG	1 cut(s)	523
BmgBI	CACGTC	1 cut(s)	1729
BmgT120I	GGNCC	9 cut(s)	39, 196, 336, 682, 850, 1010, 1163, 1298, 1601
BmiI	GGNNCC	6 cut(s)	337, 498, 1164, 1300, 1803, 2030
BmrI	ACTGGG	1 cut(s)	502
BmsI	GCATC	7 cut(s)	172, 1098, 1353, 1403, 1441, 1468, 1601
BmuI	ACTGGG	1 cut(s)	502
BpiI	GAAGAC	2 cut(s)	596, 1765
BpmI	CTGGAG	2 cut(s)	1167, 1647
Bpu10I	CCTNAGC	2 cut(s)	378, 2174
Bpu14I	TTCGAA	1 cut(s)	420
BpuEI	CTTGAG	3 cut(s)	800, 1220, 2248
BpuMI	CCSGG	5 cut(s)	360, 552, 848, 1698, 1851
BsaAI	YACGTR	1 cut(s)	1205
BsaBI	GATNNNNATC	1 cut(s)	1131
BsaHI	GRCGYC	1 cut(s)	398
BsaI	GGTCTC	2 cut(s)	513, 1819
BsaJI	CCNNGG	6 cut(s)	328, 871, 1284, 1440, 1696, 1849
BsaWI	WCCGGW	1 cut(s)	1863
BsaXI	ACNNNNNCTCC	2 cut(s)	2262, 2292
Bsc4I	CCNNNNNNNGG	8 cut(s)	48, 529, 530, 1019, 1198, 1373, 1423, 1841
Bse118I	RCCGGY	1 cut(s)	1863
Bse1I	ACTGG	3 cut(s)	112, 497, 1879
Bse3DI	GCAATG	6 cut(s)	215, 465, 563, 1315, 1367, 1719
Bse8I	GATNNNNATC	1 cut(s)	1131
BseBI	CCWGG	6 cut(s)	200, 542, 1193, 1442, 1554, 1774
BseDI	CCNNGG	6 cut(s)	328, 871, 1284, 1440, 1696, 1849
BseGI	GGATG	4 cut(s)	187, 1344, 1418, 2218
BseJI	GATNNNNATC	1 cut(s)	1131
BseLI	CCNNNNNNNGG	8 cut(s)	48, 529, 530, 1019, 1198, 1373, 1423, 1841
BseMI	GCAATG	6 cut(s)	215, 465, 563, 1315, 1367, 1719
BseMII	CTCAG	6 cut(s)	114, 392, 438, 1053, 2195, 2300
BseNI	ACTGG	3 cut(s)	112, 497, 1879
BseRI	GAGGAG	1 cut(s)	1644
BseSI	GKGCMC	1 cut(s)	2130
BseX3I	CGGCCG	1 cut(s)	325
BsgI	GTGCAG	2 cut(s)	224, 1266
Bsh1236I	CGCG	1 cut(s)	2135
Bsh1285I	CGRYCG	1 cut(s)	328
BshNI	GGYRCC	1 cut(s)	2028
BshTI	ACCGGT	1 cut(s)	1863
BsiEI	CGRYCG	1 cut(s)	328
BsiHKAI	GWGCWC	2 cut(s)	101, 2130
BsiHKCI	CYCGRG	1 cut(s)	523
BsiSI	CCGG	7 cut(s)	360, 480, 551, 848, 1698, 1851, 1864
BslFI	GGGAC	3 cut(s)	349, 1065, 1284
BslI	CCNNNNNNNGG	8 cut(s)	48, 529, 530, 1019, 1198, 1373, 1423, 1841
BsmAI	GTCTC	8 cut(s)	89, 513, 539, 1210, 1269, 1511, 1819, 2286
BsmFI	GGGAC	3 cut(s)	349, 1065, 1284
BsmI	GAATGC	2 cut(s)	793, 1677
Bso31I	GGTCTC	2 cut(s)	513, 1819
BsoBI	CYCGRG	1 cut(s)	523
Bsp119I	TTCGAA	1 cut(s)	420
Bsp1286I	GDGCHC	3 cut(s)	101, 499, 2130
Bsp1407I	TGTACA	1 cut(s)	462
Bsp143I	GATC	9 cut(s)	559, 997, 1132, 1156, 1250, 1326, 1831, 1975, 2272
BspACI	CCGC	6 cut(s)	126, 176, 194, 395, 587, 1930
BspCNI	CTCAG	6 cut(s)	113, 391, 439, 1054, 2194, 2301
BspFNI	CGCG	1 cut(s)	2135
BspHI	TCATGA	1 cut(s)	1528
BspLI	GGNNCC	6 cut(s)	337, 498, 1164, 1300, 1803, 2030
BspMAI	CTGCAG	1 cut(s)	973
BspMI	ACCTGC	1 cut(s)	845
BspPI	GGATC	6 cut(s)	554, 1005, 1127, 1258, 1826, 1983
BspT104I	TTCGAA	1 cut(s)	420
BspT107I	GGYRCC	1 cut(s)	2028
BspTNI	GGTCTC	2 cut(s)	513, 1819
BsrDI	GCAATG	6 cut(s)	215, 465, 563, 1315, 1367, 1719
BsrFI	RCCGGY	1 cut(s)	1863
BsrGI	TGTACA	1 cut(s)	462
BsrI	ACTGG	3 cut(s)	112, 497, 1879
BssAI	RCCGGY	1 cut(s)	1863
BssECI	CCNNGG	6 cut(s)	328, 871, 1284, 1440, 1696, 1849
BssMI	GATC	9 cut(s)	559, 997, 1132, 1156, 1250, 1326, 1831, 1975, 2272
BssNAI	GTATAC	1 cut(s)	1029
BssNI	GRCGYC	1 cut(s)	398
BssT1I	CCWWGG	1 cut(s)	1284
Bst1107I	GTATAC	1 cut(s)	1029
Bst2UI	CCWGG	6 cut(s)	200, 542, 1193, 1442, 1554, 1774
Bst4CI	ACNGT	7 cut(s)	78, 311, 1007, 1244, 1486, 1885, 2098
Bst6I	CTCTTC	3 cut(s)	422, 529, 1572
BstACI	GRCGYC	1 cut(s)	398
BstAPI	GCANNNNNTGC	2 cut(s)	1350, 1478
BstAUI	TGTACA	1 cut(s)	462
BstBAI	YACGTR	1 cut(s)	1205
BstBI	TTCGAA	1 cut(s)	420
BstC8I	GCNNGC	5 cut(s)	124, 266, 1142, 1200, 2222
BstDEI	CTNAG	8 cut(s)	100, 378, 447, 1062, 1966, 2174, 2181, 2309
BstDSI	CCRYGG	1 cut(s)	328
BstEII	GGTNACC	1 cut(s)	1844
BstF5I	GGATG	4 cut(s)	187, 1344, 1418, 2218
BstFNI	CGCG	1 cut(s)	2135
BstHHI	GCGC	2 cut(s)	842, 2137
BstKTI	GATC	9 cut(s)	562, 1000, 1135, 1159, 1253, 1329, 1834, 1978, 2275
BstMAI	GTCTC	8 cut(s)	89, 513, 539, 1210, 1269, 1511, 1819, 2286
BstMBI	GATC	9 cut(s)	559, 997, 1132, 1156, 1250, 1326, 1831, 1975, 2272
BstMCI	CGRYCG	1 cut(s)	328
BstNI	CCWGG	6 cut(s)	200, 542, 1193, 1442, 1554, 1774
BstNSI	RCATGY	2 cut(s)	654, 2288
BstPI	GGTNACC	1 cut(s)	1844
BstSFI	CTRYAG	2 cut(s)	969, 1485
BstSLI	GKGCMC	1 cut(s)	2130
BstUI	CGCG	1 cut(s)	2135
BstV2I	GAAGAC	2 cut(s)	596, 1765
BstX2I	RGATCY	4 cut(s)	559, 997, 1156, 1831
BstYI	RGATCY	4 cut(s)	559, 997, 1156, 1831
BstZ17I	GTATAC	1 cut(s)	1029
BstZI	CGGCCG	1 cut(s)	325
BsuI	GTATCC	4 cut(s)	584, 887, 1685, 1788
BtgI	CCRYGG	1 cut(s)	328
BtrI	CACGTC	1 cut(s)	1729
BtsCI	GGATG	4 cut(s)	187, 1344, 1418, 2218
BtsI	GCAGTG	3 cut(s)	726, 1047, 1434
BtsIMutI	CAGTG	9 cut(s)	726, 903, 1047, 1249, 1434, 1872, 2103, 2130, 2306
BveI	ACCTGC	1 cut(s)	845
Cac8I	GCNNGC	5 cut(s)	124, 266, 1142, 1200, 2222
CaiI	CAGNNNCTG	4 cut(s)	211, 1198, 1835, 2308
CciI	TCATGA	1 cut(s)	1528
CfoI	GCGC	2 cut(s)	842, 2137
Cfr10I	RCCGGY	1 cut(s)	1863
Cfr13I	GGNCC	9 cut(s)	39, 196, 336, 682, 850, 1010, 1163, 1298, 1601
CseI	GACGC	3 cut(s)	254, 387, 1100
CsiI	ACCWGGT	2 cut(s)	198, 1772
Csp6I	GTAC	6 cut(s)	283, 463, 928, 1179, 1636, 2279
CspAI	ACCGGT	1 cut(s)	1863
CspCI	CAANNNNNGTGG	4 cut(s)	1386, 1421, 2065, 2100
CviAII	CATG	9 cut(s)	651, 802, 1529, 1816, 1979, 2054, 2071, 2276, 2285
CviQI	GTAC	6 cut(s)	283, 463, 928, 1179, 1636, 2279
DdeI	CTNAG	8 cut(s)	100, 378, 447, 1062, 1966, 2174, 2181, 2309
DpnI	GATC	9 cut(s)	561, 999, 1134, 1158, 1252, 1328, 1833, 1977, 2274
DpnII	GATC	9 cut(s)	559, 997, 1132, 1156, 1250, 1326, 1831, 1975, 2272
DraIII	CACNNNGTG	2 cut(s)	313, 2312
DrdI	GACNNNNNNGTC	1 cut(s)	397
DriI	GACNNNNNGTC	1 cut(s)	1524
DseDI	GACNNNNNNGTC	1 cut(s)	397
EaeI	YGGCCR	2 cut(s)	325, 477
EagI	CGGCCG	1 cut(s)	325
Eam1104I	CTCTTC	3 cut(s)	422, 529, 1572
Eam1105I	GACNNNNNGTC	1 cut(s)	1524
EarI	CTCTTC	3 cut(s)	422, 529, 1572
EciI	GGCGGA	1 cut(s)	209
Ecl136II	GAGCTC	1 cut(s)	99
EclXI	CGGCCG	1 cut(s)	325
Eco130I	CCWWGG	1 cut(s)	1284
Eco147I	AGGCCT	1 cut(s)	1377
Eco24I	GRGCYC	2 cut(s)	101, 499
Eco31I	GGTCTC	2 cut(s)	513, 1819
Eco32I	GATATC	1 cut(s)	1642
Eco47I	GGWCC	8 cut(s)	196, 336, 682, 850, 1010, 1163, 1298, 1601
Eco52I	CGGCCG	1 cut(s)	325
Eco53kI	GAGCTC	1 cut(s)	99
Eco57I	CTGAAG	2 cut(s)	1599, 1906
Eco72I	CACGTG	1 cut(s)	1205
Eco88I	CYCGRG	1 cut(s)	523
Eco91I	GGTNACC	1 cut(s)	1844
EcoICRI	GAGCTC	1 cut(s)	99
EcoO109I	RGGNCCY	3 cut(s)	39, 1298, 1601
EcoO65I	GGTNACC	1 cut(s)	1844
EcoRII	CCWGG	6 cut(s)	198, 540, 1191, 1440, 1552, 1772
EcoRV	GATATC	1 cut(s)	1642
EcoT14I	CCWWGG	1 cut(s)	1284
EcoT38I	GRGCYC	2 cut(s)	101, 499
ErhI	CCWWGG	1 cut(s)	1284
FaeI	CATG	9 cut(s)	654, 805, 1532, 1819, 1982, 2057, 2074, 2279, 2288
FalI	AAGNNNNNCTT	2 cut(s)	1038, 1070
FaqI	GGGAC	3 cut(s)	349, 1065, 1284
FatI	CATG	9 cut(s)	650, 801, 1528, 1815, 1978, 2053, 2070, 2275, 2284
FauI	CCCGC	1 cut(s)	580
FauNDI	CATATG	1 cut(s)	1150
FblI	GTMKAC	2 cut(s)	1028, 1794
FokI	GGATG	4 cut(s)	194, 1331, 1425, 2225
FriOI	GRGCYC	2 cut(s)	101, 499
FspBI	CTAG	6 cut(s)	573, 795, 1001, 1115, 1934, 2039
FspI	TGCGCA	1 cut(s)	841
GlaI	GCGC	2 cut(s)	841, 2136
GsuI	CTGGAG	2 cut(s)	1167, 1647
HapII	CCGG	7 cut(s)	360, 480, 551, 848, 1698, 1851, 1864
HgaI	GACGC	3 cut(s)	254, 387, 1100
HhaI	GCGC	2 cut(s)	842, 2137
Hin1I	GRCGYC	1 cut(s)	398
Hin1II	CATG	9 cut(s)	654, 805, 1532, 1819, 1982, 2057, 2074, 2279, 2288
Hin6I	GCGC	2 cut(s)	840, 2135
HinP1I	GCGC	2 cut(s)	840, 2135
HincII	GTYRAC	1 cut(s)	444
HindII	GTYRAC	1 cut(s)	444
HindIII	AAGCTT	2 cut(s)	148, 1785
HinfI	GANTC	3 cut(s)	547, 914, 1525
HpaII	CCGG	7 cut(s)	360, 480, 551, 848, 1698, 1851, 1864
HphI	GGTGA	6 cut(s)	1142, 1511, 1636, 1889, 1919, 2074
Hpy188I	TCNGA	5 cut(s)	298, 518, 872, 1579, 2184
Hpy188III	TCNNGA	5 cut(s)	1001, 1184, 1237, 1529, 1626
Hpy99I	CGWCG	2 cut(s)	134, 403
HpyAV	CCTTC	5 cut(s)	426, 721, 1028, 2158, 2179
HpyCH4III	ACNGT	7 cut(s)	78, 311, 1007, 1244, 1486, 1885, 2098
HpyCH4IV	ACGT	5 cut(s)	281, 594, 1204, 1400, 1728
HpyF3I	CTNAG	8 cut(s)	100, 378, 447, 1062, 1966, 2174, 2181, 2309
HpySE526I	ACGT	5 cut(s)	281, 594, 1204, 1400, 1728
Hsp92I	GRCGYC	1 cut(s)	398
Hsp92II	CATG	9 cut(s)	654, 805, 1532, 1819, 1982, 2057, 2074, 2279, 2288
HspAI	GCGC	2 cut(s)	840, 2135
Kzo9I	GATC	9 cut(s)	559, 997, 1132, 1156, 1250, 1326, 1831, 1975, 2272
LmnI	GCTCC	5 cut(s)	362, 502, 1037, 1195, 1712
LweI	GCATC	7 cut(s)	172, 1098, 1353, 1403, 1441, 1468, 1601
MabI	ACCWGGT	2 cut(s)	198, 1772
MaeI	CTAG	6 cut(s)	573, 795, 1001, 1115, 1934, 2039
MaeII	ACGT	5 cut(s)	281, 594, 1204, 1400, 1728
MaeIII	GTNAC	8 cut(s)	303, 575, 724, 901, 1057, 1844, 1877, 1925
MalI	GATC	9 cut(s)	561, 999, 1134, 1158, 1252, 1328, 1833, 1977, 2274
MboI	GATC	9 cut(s)	559, 997, 1132, 1156, 1250, 1326, 1831, 1975, 2272
MflI	RGATCY	4 cut(s)	559, 997, 1156, 1831
MhlI	GDGCHC	3 cut(s)	101, 499, 2130
MluCI	AATT	5 cut(s)	1093, 1508, 1512, 1668, 1892
MlyI	GAGTC	2 cut(s)	541, 1534
MmeI	TCCRAC	3 cut(s)	276, 1669, 1941
MroXI	GAANNNNTTC	2 cut(s)	354, 2168
MseI	TTAA	7 cut(s)	138, 507, 639, 822, 1278, 1511, 1907
MslI	CAYNNNNRTG	3 cut(s)	1106, 1820, 2229
MspI	CCGG	7 cut(s)	360, 480, 551, 848, 1698, 1851, 1864
Mva1269I	GAATGC	2 cut(s)	793, 1677
MvaI	CCWGG	6 cut(s)	200, 542, 1193, 1442, 1554, 1774
MvnI	CGCG	1 cut(s)	2135
NciI	CCSGG	5 cut(s)	360, 552, 848, 1698, 1851
NdeI	CATATG	1 cut(s)	1150
NdeII	GATC	9 cut(s)	559, 997, 1132, 1156, 1250, 1326, 1831, 1975, 2272
NlaIII	CATG	9 cut(s)	654, 805, 1532, 1819, 1982, 2057, 2074, 2279, 2288
NlaIV	GGNNCC	6 cut(s)	337, 498, 1164, 1300, 1803, 2030
NmuCI	GTSAC	4 cut(s)	901, 1057, 1877, 1925
NsbI	TGCGCA	1 cut(s)	841
NspI	RCATGY	2 cut(s)	654, 2288
NspV	TTCGAA	1 cut(s)	420
OliI	CACNNNNGTG	1 cut(s)	2229
PagI	TCATGA	1 cut(s)	1528
PceI	AGGCCT	1 cut(s)	1377
PcsI	WCGNNNNNNNCGW	1 cut(s)	398
PctI	GAATGC	2 cut(s)	793, 1677
PdmI	GAANNNNTTC	2 cut(s)	354, 2168
PfeI	GAWTC	1 cut(s)	914
PflMI	CCANNNNNTGG	2 cut(s)	1019, 1198
PfoI	TCCNGGA	3 cut(s)	358, 550, 1552
PinAI	ACCGGT	1 cut(s)	1863
PleI	GAGTC	2 cut(s)	541, 1533
PmaCI	CACGTG	1 cut(s)	1205
PmlI	CACGTG	1 cut(s)	1205
PpsI	GAGTC	2 cut(s)	541, 1533
Ppu21I	YACGTR	1 cut(s)	1205
PpuMI	RGGWCCY	2 cut(s)	1298, 1601
PshBI	ATTAAT	1 cut(s)	1511
PsiI	TTATAA	1 cut(s)	1746
Psp124BI	GAGCTC	1 cut(s)	101
Psp1406I	AACGTT	1 cut(s)	1400
Psp5II	RGGWCCY	2 cut(s)	1298, 1601
Psp6I	CCWGG	6 cut(s)	198, 540, 1191, 1440, 1552, 1772
PspCI	CACGTG	1 cut(s)	1205
PspEI	GGTNACC	1 cut(s)	1844
PspGI	CCWGG	6 cut(s)	198, 540, 1191, 1440, 1552, 1772
PspN4I	GGNNCC	6 cut(s)	337, 498, 1164, 1300, 1803, 2030
PspPI	GGNCC	9 cut(s)	39, 196, 336, 682, 850, 1010, 1163, 1298, 1601
PspPPI	RGGWCCY	2 cut(s)	1298, 1601
PsrI	GAACNNNNNNTAC	2 cut(s)	1785, 1817
PstI	CTGCAG	1 cut(s)	973
PstNI	CAGNNNCTG	4 cut(s)	211, 1198, 1835, 2308
PsuI	RGATCY	4 cut(s)	559, 997, 1156, 1831
RsaI	GTAC	6 cut(s)	284, 464, 929, 1180, 1637, 2280
RsaNI	GTAC	6 cut(s)	283, 463, 928, 1179, 1636, 2279
RseI	CAYNNNNRTG	3 cut(s)	1106, 1820, 2229
SacI	GAGCTC	1 cut(s)	101
SaqAI	TTAA	7 cut(s)	138, 507, 639, 822, 1278, 1511, 1907
Sau3AI	GATC	9 cut(s)	559, 997, 1132, 1156, 1250, 1326, 1831, 1975, 2272
Sau96I	GGNCC	9 cut(s)	39, 196, 336, 682, 850, 1010, 1163, 1298, 1601
SchI	GAGTC	2 cut(s)	541, 1534
SduI	GDGCHC	3 cut(s)	101, 499, 2130
SexAI	ACCWGGT	2 cut(s)	198, 1772
SfaNI	GCATC	7 cut(s)	172, 1098, 1353, 1403, 1441, 1468, 1601
SfcI	CTRYAG	2 cut(s)	969, 1485
SfuI	TTCGAA	1 cut(s)	420
SinI	GGWCC	8 cut(s)	196, 336, 682, 850, 1010, 1163, 1298, 1601
SmiMI	CAYNNNNRTG	3 cut(s)	1106, 1820, 2229
SmlI	CTYRAG	3 cut(s)	779, 1235, 2227
SmoI	CTYRAG	3 cut(s)	779, 1235, 2227
SpeI	ACTAGT	1 cut(s)	572
Sse9I	AATT	5 cut(s)	1093, 1508, 1512, 1668, 1892
SseBI	AGGCCT	1 cut(s)	1377
SsiI	CCGC	6 cut(s)	126, 176, 194, 395, 587, 1930
SspMI	CTAG	6 cut(s)	573, 795, 1001, 1115, 1934, 2039
SstI	GAGCTC	1 cut(s)	101
StuI	AGGCCT	1 cut(s)	1377
StyI	CCWWGG	1 cut(s)	1284
TaaI	ACNGT	7 cut(s)	78, 311, 1007, 1244, 1486, 1885, 2098
TaiI	ACGT	5 cut(s)	284, 597, 1207, 1403, 1731
TaqI	TCGA	4 cut(s)	317, 420, 598, 2019
TasI	AATT	5 cut(s)	1093, 1508, 1512, 1668, 1892
TatI	WGTACW	4 cut(s)	462, 927, 1178, 2278
TauI	GCSGC	2 cut(s)	129, 398
TfiI	GAWTC	1 cut(s)	914
Tru1I	TTAA	7 cut(s)	138, 507, 639, 822, 1278, 1511, 1907
Tru9I	TTAA	7 cut(s)	138, 507, 639, 822, 1278, 1511, 1907
TscAI	CASTG	9 cut(s)	726, 910, 1047, 1249, 1441, 1879, 2103, 2130, 2313
TseFI	GTSAC	4 cut(s)	901, 1057, 1877, 1925
Tsp45I	GTSAC	4 cut(s)	901, 1057, 1877, 1925
TspDTI	ATGAA	4 cut(s)	1823, 1832, 1905, 2042
TspGWI	ACGGA	1 cut(s)	1917
TspRI	CASTG	9 cut(s)	726, 910, 1047, 1249, 1441, 1879, 2103, 2130, 2313
Van91I	CCANNNNNTGG	2 cut(s)	1019, 1198
VneI	GTGCAC	1 cut(s)	2126
VpaK11BI	GGWCC	8 cut(s)	196, 336, 682, 850, 1010, 1163, 1298, 1601
VspI	ATTAAT	1 cut(s)	1511
XapI	RAATTY	1 cut(s)	1892
XbaI	TCTAGA	1 cut(s)	1000
XceI	RCATGY	2 cut(s)	654, 2288
XcmI	CCANNNNNNNNNTGG	3 cut(s)	285, 821, 1282
XmiI	GTMKAC	2 cut(s)	1028, 1794
XmnI	GAANNNNTTC	2 cut(s)	354, 2168
XspI	CTAG	6 cut(s)	573, 795, 1001, 1115, 1934, 2039

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.