Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0003333

Physical Location & Seq

Genomic Coordinates Reverse (-)

39041174 .. 39045679

Gene Structure 4506 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG365500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1896 bp

ATGCAGGTGGTGTCAACTGAGGCCAGAGCAATGTACAATGTGGGATTGGCAGGATTGACATTCTGGTCCCCAAACATTAACATTTTCCGAGACCCGAGATGGGGAAGAGGCCAAGAGACTCCGGGAGAAGACCCATTGCTCACGAGTAACTACGGATCAGGATACGTTAGAGGTCTTCAACAAACCGATAGCGGAGACAAAAATAGGCTTAAAGTTGCAGCATGTTGTAAACATTATACAGCCTATGATTTGGACAATTGGAAAGGAACTGACAGATACCATTTCAATGCAGTGGTAACAAAACAAGACATGGATGATACATTTCAGCCACCATTCAAAAGTTGTGTTCTTGATGGGAATGTTGCTAGTGTCATGTGTTCTTACAACCAGGTTAATGGAATACCAACCTGCGCAGGCCCAAACCTTCTTTCTGGGGTTATCCGAGGCGAATGGAAGTTGAATGGATACATAGTCACTGATTGCGATTCAATAGATGTGTACTACAAGAACCAACACTACACCAAGACACCAGAAGAGGCTGCAGCTAAGGCTATATTAGCAGGTTTGGATCTAAACTGTGGATCATTCTTAGGACAGTACACAGAAGGAGCAGTGAAAGGAGGACTTGTGACTGAGGCAGCCATTGACAAGGCCATCACAAACAATTTTGGCACATTGATGCGTCTAGGCTTCTTCGATGGTGATCCAAGCAAGCAACCATATGGAGATCTCGGTCCAAAGGATGTGTGCACTCCACAGAACCAGGAGCTGGCACGTGAAACAGCGAGACAAGGGATAGTGTTGCTGAAGAACACTCCAGGATCACTGCCTCTGTCTCCCACAGCCATCAAATCCTTGGCAGTTATAGGTCCCAATGGCAATGTCACAAAGACTATGATTGGAAACTACGAAGGCACCCCTTGCAAATATACAACTCCTTTGCAAGGCCTAACAGCCGTAGTTCCCACAACATTTGTGGCCGGGTGCGTTGATGTGGCTTGTGGCACTGCCCAGGTAGATGATGCTACCAAGTTAGCAGCCGCAGCAGATGCAACTGTACTTATAGTGGGTGAAAATCAATCAATTGAGACTGAAAGTCATGATAGAATCGACCTCCATCTTCCAGGACAGCAAACTCTTCTAATAACTGAAGTAGCGAAGGCTTCTAAAGGACCTGTAATCCTTGTCATAATGTCTGGAGGAGGGTTCGATATTACCTTTGCGAAAAATGATGATAAAATTACAAGCATTCTATGGGTTGGTTACCCTGGCGAAGCTGGTGGAGCTGCCATTGCTGACGTGATTTTTGGCTTTTATAATCCAAGTGGAAGACTACCTATGACGTGGTATCCTCAAGCTTATGTAGACAAGGTCCCTATGACAAACATGAATATGAGACCAGATCCTGCAAGTGGTTACCCGGGCAGGACTTACCGGTTTTACACTGGTGACACTGTTTATGAATTTGGATACGGAATAAGCTACTCCACCTTCAATCACCGCCTAGTTCGAGCACCGAAGCAAGTATCCATTCCCTTAGAGGAGGATCATGTATGCCACTCATCAAGTTGCCAATCACTTTATGTTGTAGAAGAAAGGTGTCAAAATCTAGCTTTCGATATCCATTTGGGGGTGAAAAACATGGGCAAAATGAGTGGAAGTCATACAGTCTTATTGTATTCGAGTCCTCCATCTGTGCACAATTCTCCTAAAAAGCACTTGTTGGGATTTGAGAAGGTGTTCCTTAGCTCTCAGGGTGAAGCATTGGTCAAGTTCAATGTGGATGTTTGCAAGCACTTGAGTGTGGTTGATGAGCTAGGAAGTAGGAAAGTTGCTTTGGGAGATCATGTACTACATGTGGGAGACTTGAAACAGACATTGAGTGTGAGGATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0002376 GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005576 GO:0005618 GO:0005623 GO:0005975 GO:0005976 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009044 GO:0009056 GO:0009057 GO:0009605 GO:0009607 GO:0009627 GO:0009814 GO:0009987 GO:0010383 GO:0010410 GO:0016052 GO:0016787 GO:0016798 GO:0030312 GO:0031221 GO:0031222 GO:0043170 GO:0043207 GO:0044036 GO:0044237 GO:0044238 GO:0044260 GO:0044464 GO:0045087 GO:0045491 GO:0045493 GO:0046556 GO:0048046 GO:0050896 GO:0051704 GO:0051707 GO:0071554 GO:0071704 GO:0071944 GO:0097599 GO:0098542 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00520 ko01100 map00520 map01100

Pfam Domains

Protein Families

Fn3-like Glyco_hydro_3 Glyco_hydro_3_C

Protein Analysis

631

Amino Acids

68.41

Weight (kDa)

6.03

Isoelectric Point (pI)

30.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_3	PF00933	6 - 219	3.2e-29	Glycosyl hydrolase family 3 N terminal domain
Glyco_hydro_3_C	PF01915	266 - 495	5e-51	Glycosyl hydrolase family 3 C-terminal domain
Fn3-like	PF14310	555 - 622	5.6e-10	Fibronectin type III-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0003333)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G09730 AT5G64570 AT5G64570 AT5G64570
fragaria_vesca	FvH4_5g30690 FvH4_5g30710 FvH4_5g30710 FvH4_5g30710 FvH4_5g30710
malus_domestica	MD08G1221800.v1.1 MD15G1414100.v1.1
prunus_persica	Prupe.1G559400_v2.0.a1 Prupe.1G559400_v2.0.a1
pyrus_communis	pycom08g19240 pycom15g36840
rosa_chinensis	RchiOBHm_Chr7g0225551 RchiOBHm_Chr7g0225581
rosa_laevigata	RLG00000001804 RLG00000001806
rosa_multiflora	Rmu_co8377913.1_g000001 Rmu_sc0003876.1_g000021 Rmu_sc0006321.1_g000006
rosa_roxburghii	Rroxscaffold_3G00233670 Rroxscaffold_3G00233690
rosa_rugosa	Rorug07G0231600 Rorug07G0231800
rosa_samantha	Rh7AG372300 Rh7AG372500 Rh7BG365400 Rh7BG365500 Rh7CG390600 Rh7CG390800 Rh7DG376200 Rh7DG376300
rosa_wichuraiana	Rw7G031750 Rw7G031760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1317
AasI	GACNNNNNNGTC	1 cut(s)	64
Acc16I	TGCGCA	1 cut(s)	412
Acc36I	ACCTGC	2 cut(s)	416, 551
AccB1I	GGYRCC	1 cut(s)	914
AccB7I	CCANNNNNTGG	1 cut(s)	769
AccI	GTMKAC	1 cut(s)	1365
AciI	CCGC	3 cut(s)	192, 1041, 1501
AclWI	GGATC	7 cut(s)	163, 576, 589, 698, 829, 1397, 1554
AcoI	YGGCCR	1 cut(s)	978
AcsI	RAATTY	1 cut(s)	1463
AcuI	CTGAAG	2 cut(s)	827, 1170
AcvI	CACGTG	1 cut(s)	776
AfaI	GTAC	5 cut(s)	35, 500, 599, 1059, 1851
AfiI	CCNNNNNNNGG	6 cut(s)	100, 101, 769, 944, 1412, 1630
AflIII	ACRYGT	1 cut(s)	1855
AgeI	ACCGGT	1 cut(s)	1434
AgsI	TTSAA	8 cut(s)	179, 286, 337, 460, 489, 1495, 1777, 1870
AhdI	GACNNNNNGTC	1 cut(s)	1095
AjiI	CACGTC	2 cut(s)	1300, 1344
AjnI	CCWGG	6 cut(s)	387, 762, 817, 1011, 1123, 1267
AjuI	GAANNNNNNNTTGG	4 cut(s)	412, 444, 1820, 1852
AleI	CACNNNNGTG	1 cut(s)	1800
AluBI	AGCT	9 cut(s)	545, 769, 1277, 1286, 1358, 1482, 1613, 1749, 1816
AluI	AGCT	9 cut(s)	545, 769, 1277, 1286, 1358, 1482, 1613, 1749, 1816
Alw21I	GWGCWC	3 cut(s)	752, 1516, 1701
Alw26I	GTCTC	8 cut(s)	84, 110, 189, 781, 840, 1082, 1390, 1857
Alw44I	GTGCAC	2 cut(s)	748, 1697
AlwI	GGATC	7 cut(s)	163, 576, 589, 698, 829, 1397, 1554
AlwNI	CAGNNNCTG	2 cut(s)	769, 1406
Ama87I	CYCGRG	2 cut(s)	94, 1420
AoxI	GGCC	6 cut(s)	21, 109, 415, 651, 946, 978
ApaLI	GTGCAC	2 cut(s)	748, 1697
ApeKI	GCWGC	7 cut(s)	218, 539, 542, 638, 1037, 1043, 1286
ApoI	RAATTY	1 cut(s)	1463
ArsI	GACNNNNNNTTYG	2 cut(s)	1289, 1321
AsiGI	ACCGGT	1 cut(s)	1434
Asp700I	GAANNNNTTC	1 cut(s)	1739
AspLEI	GCGC	1 cut(s)	413
AspS9I	GGNCC	6 cut(s)	66, 416, 734, 869, 1172, 1372
AsuC2I	CCSGG	4 cut(s)	123, 982, 1421, 1422
AsuHPI	GGTGA	6 cut(s)	713, 1082, 1460, 1490, 1645, 1769
AvaI	CYCGRG	2 cut(s)	94, 1420
AvaII	GGWCC	5 cut(s)	66, 734, 869, 1172, 1372
BaeGI	GKGCMC	2 cut(s)	752, 1701
BanI	GGYRCC	1 cut(s)	914
BauI	CACGAG	1 cut(s)	142
BbrPI	CACGTG	1 cut(s)	776
BbsI	GAAGAC	3 cut(s)	135, 167, 1336
Bbv12I	GWGCWC	3 cut(s)	752, 1516, 1701
BbvI	GCAGC	7 cut(s)	230, 526, 554, 650, 1049, 1055, 1273
BccI	CCATC	7 cut(s)	93, 347, 662, 692, 854, 1125, 1699
BceAI	ACGGC	1 cut(s)	941
BciT130I	CCWGG	6 cut(s)	389, 764, 819, 1013, 1125, 1269
BciVI	GTATCC	5 cut(s)	155, 458, 1359, 1463, 1537
BcnI	CCSGG	4 cut(s)	123, 982, 1421, 1422
BcoDI	GTCTC	8 cut(s)	84, 110, 189, 781, 840, 1082, 1390, 1857
BfaI	CTAG	5 cut(s)	366, 686, 1505, 1610, 1817
BfmI	CTRYAG	1 cut(s)	540
BfuAI	ACCTGC	2 cut(s)	416, 551
BfuI	GTATCC	5 cut(s)	155, 458, 1359, 1463, 1537
BglII	AGATCT	1 cut(s)	727
BisI	GCNGC	8 cut(s)	219, 540, 543, 639, 1038, 1041, 1044, 1287
BlsI	GCNGC	8 cut(s)	220, 541, 544, 640, 1039, 1042, 1045, 1288
Bme18I	GGWCC	5 cut(s)	66, 734, 869, 1172, 1372
BmeRI	GACNNNNNGTC	1 cut(s)	1095
BmeT110I	CYCGRG	2 cut(s)	94, 1420
BmgBI	CACGTC	2 cut(s)	1300, 1344
BmgT120I	GGNCC	6 cut(s)	66, 416, 734, 869, 1172, 1372
BmiI	GGNNCC	4 cut(s)	68, 871, 916, 1374
BmsI	GCATC	3 cut(s)	669, 1012, 1039
BpiI	GAAGAC	3 cut(s)	135, 167, 1336
BpmI	CTGGAG	2 cut(s)	801, 1218
Bpu10I	CCTNAGC	2 cut(s)	546, 1745
BpuEI	CTTGAG	2 cut(s)	1338, 1819
BpuMI	CCSGG	4 cut(s)	123, 982, 1421, 1422
BsaAI	YACGTR	1 cut(s)	776
BsaBI	GATNNNNATC	1 cut(s)	702
BsaI	GGTCTC	2 cut(s)	84, 1390
BsaJI	CCNNGG	5 cut(s)	442, 855, 1011, 1267, 1420
BsaWI	WCCGGW	1 cut(s)	1434
BsaXI	ACNNNNNCTCC	4 cut(s)	612, 642, 1833, 1863
Bsc4I	CCNNNNNNNGG	6 cut(s)	100, 101, 769, 944, 1412, 1630
Bse118I	RCCGGY	1 cut(s)	1434
Bse1I	ACTGG	1 cut(s)	1450
Bse3DI	GCAATG	4 cut(s)	36, 134, 886, 1290
Bse8I	GATNNNNATC	1 cut(s)	702
BseBI	CCWGG	6 cut(s)	389, 764, 819, 1013, 1125, 1269
BseDI	CCNNGG	5 cut(s)	442, 855, 1011, 1267, 1420
BseGI	GGATG	3 cut(s)	319, 748, 1789
BseJI	GATNNNNATC	1 cut(s)	702
BseLI	CCNNNNNNNGG	6 cut(s)	100, 101, 769, 944, 1412, 1630
BseMI	GCAATG	4 cut(s)	36, 134, 886, 1290
BseMII	CTCAG	3 cut(s)	9, 624, 1766
BseNI	ACTGG	1 cut(s)	1450
BseRI	GAGGAG	2 cut(s)	1215, 1556
BseSI	GKGCMC	2 cut(s)	752, 1701
BseXI	GCAGC	7 cut(s)	230, 526, 554, 650, 1049, 1055, 1273
BshFI	GGCC	6 cut(s)	23, 111, 417, 653, 948, 980
BshNI	GGYRCC	1 cut(s)	914
BshTI	ACCGGT	1 cut(s)	1434
BsiHKAI	GWGCWC	3 cut(s)	752, 1516, 1701
BsiHKCI	CYCGRG	2 cut(s)	94, 1420
BsiSI	CCGG	4 cut(s)	122, 981, 1421, 1435
BslFI	GGGAC	3 cut(s)	52, 855, 1358
BslI	CCNNNNNNNGG	6 cut(s)	100, 101, 769, 944, 1412, 1630
BsmAI	GTCTC	8 cut(s)	84, 110, 189, 781, 840, 1082, 1390, 1857
BsmFI	GGGAC	3 cut(s)	52, 855, 1358
BsmI	GAATGC	1 cut(s)	1248
BsnI	GGCC	6 cut(s)	23, 111, 417, 653, 948, 980
Bso31I	GGTCTC	2 cut(s)	84, 1390
BsoBI	CYCGRG	2 cut(s)	94, 1420
Bsp1286I	GDGCHC	3 cut(s)	752, 1516, 1701
Bsp1407I	TGTACA	1 cut(s)	33
Bsp143I	GATC	9 cut(s)	155, 568, 581, 703, 727, 821, 1402, 1546, 1843
BspACI	CCGC	3 cut(s)	192, 1041, 1501
BspANI	GGCC	6 cut(s)	23, 111, 417, 653, 948, 980
BspCNI	CTCAG	3 cut(s)	10, 625, 1765
BspHI	TCATGA	1 cut(s)	1099
BspLI	GGNNCC	4 cut(s)	68, 871, 916, 1374
BspMAI	CTGCAG	1 cut(s)	544
BspMI	ACCTGC	2 cut(s)	416, 551
BspPI	GGATC	7 cut(s)	163, 576, 589, 698, 829, 1397, 1554
BspT107I	GGYRCC	1 cut(s)	914
BspTNI	GGTCTC	2 cut(s)	84, 1390
BsrDI	GCAATG	4 cut(s)	36, 134, 886, 1290
BsrFI	RCCGGY	1 cut(s)	1434
BsrGI	TGTACA	1 cut(s)	33
BsrI	ACTGG	1 cut(s)	1450
BssAI	RCCGGY	1 cut(s)	1434
BssECI	CCNNGG	5 cut(s)	442, 855, 1011, 1267, 1420
BssMI	GATC	9 cut(s)	155, 568, 581, 703, 727, 821, 1402, 1546, 1843
BssSI	CACGAG	1 cut(s)	142
BssT1I	CCWWGG	1 cut(s)	855
Bst2BI	CACGAG	1 cut(s)	142
Bst2UI	CCWGG	6 cut(s)	389, 764, 819, 1013, 1125, 1269
Bst4CI	ACNGT	5 cut(s)	578, 597, 1057, 1456, 1669
Bst6I	CTCTTC	3 cut(s)	100, 528, 1143
BstAPI	GCANNNNNTGC	2 cut(s)	921, 1049
BstAUI	TGTACA	1 cut(s)	33
BstBAI	YACGTR	1 cut(s)	776
BstC8I	GCNNGC	4 cut(s)	415, 713, 771, 1793
BstDEI	CTNAG	7 cut(s)	18, 546, 589, 633, 1537, 1745, 1752
BstEII	GGTNACC	2 cut(s)	1262, 1415
BstENI	CCTNNNNNAGG	1 cut(s)	942
BstF5I	GGATG	3 cut(s)	319, 748, 1789
BstHHI	GCGC	1 cut(s)	413
BstKTI	GATC	9 cut(s)	158, 571, 584, 706, 730, 824, 1405, 1549, 1846
BstMAI	GTCTC	8 cut(s)	84, 110, 189, 781, 840, 1082, 1390, 1857
BstMBI	GATC	9 cut(s)	155, 568, 581, 703, 727, 821, 1402, 1546, 1843
BstMWI	GCNNNNNNNGC	7 cut(s)	548, 557, 921, 1043, 1049, 1283, 1292
BstNI	CCWGG	6 cut(s)	389, 764, 819, 1013, 1125, 1269
BstNSI	RCATGY	2 cut(s)	225, 1859
BstPI	GGTNACC	2 cut(s)	1262, 1415
BstSFI	CTRYAG	1 cut(s)	540
BstSLI	GKGCMC	2 cut(s)	752, 1701
BstV1I	GCAGC	7 cut(s)	230, 526, 554, 650, 1049, 1055, 1273
BstV2I	GAAGAC	3 cut(s)	135, 167, 1336
BstX2I	RGATCY	3 cut(s)	568, 727, 1402
BstXI	CCANNNNNNTGG	1 cut(s)	395
BstYI	RGATCY	3 cut(s)	568, 727, 1402
BsuI	GTATCC	5 cut(s)	155, 458, 1359, 1463, 1537
BsuRI	GGCC	6 cut(s)	23, 111, 417, 653, 948, 980
BtrI	CACGTC	2 cut(s)	1300, 1344
BtsCI	GGATG	3 cut(s)	319, 748, 1789
BtsI	GCAGTG	4 cut(s)	297, 618, 824, 1005
BtsIMutI	CAGTG	7 cut(s)	297, 474, 618, 824, 1005, 1443, 1452
BveI	ACCTGC	2 cut(s)	416, 551
Cac8I	GCNNGC	4 cut(s)	415, 713, 771, 1793
CaiI	CAGNNNCTG	2 cut(s)	769, 1406
CciI	TCATGA	1 cut(s)	1099
CfoI	GCGC	1 cut(s)	413
Cfr10I	RCCGGY	1 cut(s)	1434
Cfr13I	GGNCC	6 cut(s)	66, 416, 734, 869, 1172, 1372
Cfr9I	CCCGGG	1 cut(s)	1420
CseI	GACGC	1 cut(s)	671
CsiI	ACCWGGT	1 cut(s)	387
Csp6I	GTAC	5 cut(s)	34, 499, 598, 1058, 1850
CspAI	ACCGGT	1 cut(s)	1434
CspCI	CAANNNNNGTGG	6 cut(s)	955, 957, 990, 992, 1636, 1671
CviAII	CATG	9 cut(s)	222, 310, 373, 1100, 1387, 1550, 1642, 1847, 1856
CviQI	GTAC	5 cut(s)	34, 499, 598, 1058, 1850
DdeI	CTNAG	7 cut(s)	18, 546, 589, 633, 1537, 1745, 1752
DpnI	GATC	9 cut(s)	157, 570, 583, 705, 729, 823, 1404, 1548, 1845
DpnII	GATC	9 cut(s)	155, 568, 581, 703, 727, 821, 1402, 1546, 1843
DrdI	GACNNNNNNGTC	1 cut(s)	64
DriI	GACNNNNNGTC	1 cut(s)	1095
DseDI	GACNNNNNNGTC	1 cut(s)	64
EaeI	YGGCCR	1 cut(s)	978
Eam1104I	CTCTTC	3 cut(s)	100, 528, 1143
Eam1105I	GACNNNNNGTC	1 cut(s)	1095
EarI	CTCTTC	3 cut(s)	100, 528, 1143
Eco130I	CCWWGG	1 cut(s)	855
Eco147I	AGGCCT	1 cut(s)	948
Eco31I	GGTCTC	2 cut(s)	84, 1390
Eco32I	GATATC	1 cut(s)	1621
Eco47I	GGWCC	5 cut(s)	66, 734, 869, 1172, 1372
Eco57I	CTGAAG	2 cut(s)	827, 1170
Eco72I	CACGTG	1 cut(s)	776
Eco88I	CYCGRG	2 cut(s)	94, 1420
Eco91I	GGTNACC	2 cut(s)	1262, 1415
EcoNI	CCTNNNNNAGG	1 cut(s)	942
EcoO109I	RGGNCCY	3 cut(s)	869, 1172, 1372
EcoO65I	GGTNACC	2 cut(s)	1262, 1415
EcoRII	CCWGG	6 cut(s)	387, 762, 817, 1011, 1123, 1267
EcoRV	GATATC	1 cut(s)	1621
EcoT14I	CCWWGG	1 cut(s)	855
ErhI	CCWWGG	1 cut(s)	855
FaeI	CATG	9 cut(s)	225, 313, 376, 1103, 1390, 1553, 1645, 1850, 1859
FalI	AAGNNNNNCTT	2 cut(s)	609, 641
FaqI	GGGAC	3 cut(s)	52, 855, 1358
FatI	CATG	9 cut(s)	221, 309, 372, 1099, 1386, 1549, 1641, 1846, 1855
FauNDI	CATATG	1 cut(s)	721
FblI	GTMKAC	1 cut(s)	1365
Fnu4HI	GCNGC	8 cut(s)	219, 540, 543, 639, 1038, 1041, 1044, 1287
FokI	GGATG	3 cut(s)	326, 755, 1796
Fsp4HI	GCNGC	8 cut(s)	219, 540, 543, 639, 1038, 1041, 1044, 1287
FspBI	CTAG	5 cut(s)	366, 686, 1505, 1610, 1817
FspI	TGCGCA	1 cut(s)	412
GlaI	GCGC	1 cut(s)	412
GluI	GCNGC	8 cut(s)	219, 540, 543, 639, 1038, 1041, 1044, 1287
GsuI	CTGGAG	2 cut(s)	801, 1218
HaeIII	GGCC	6 cut(s)	23, 111, 417, 653, 948, 980
HapII	CCGG	4 cut(s)	122, 981, 1421, 1435
HgaI	GACGC	1 cut(s)	671
HhaI	GCGC	1 cut(s)	413
Hin1II	CATG	9 cut(s)	225, 313, 376, 1103, 1390, 1553, 1645, 1850, 1859
Hin6I	GCGC	1 cut(s)	411
HinP1I	GCGC	1 cut(s)	411
HincII	GTYRAC	1 cut(s)	15
HindII	GTYRAC	1 cut(s)	15
HindIII	AAGCTT	1 cut(s)	1356
HinfI	GANTC	4 cut(s)	118, 485, 1107, 1684
HpaII	CCGG	4 cut(s)	122, 981, 1421, 1435
HphI	GGTGA	6 cut(s)	713, 1082, 1460, 1490, 1645, 1769
Hpy166II	GTNNAC	7 cut(s)	15, 230, 499, 600, 750, 1366, 1699
Hpy188I	TCNGA	2 cut(s)	89, 443
Hpy188III	TCNNGA	5 cut(s)	142, 159, 350, 1100, 1197
Hpy8I	GTNNAC	7 cut(s)	15, 230, 499, 600, 750, 1366, 1699
HpyAV	CCTTC	6 cut(s)	434, 599, 905, 1153, 1501, 1729
HpyCH4III	ACNGT	5 cut(s)	578, 597, 1057, 1456, 1669
HpyCH4IV	ACGT	4 cut(s)	165, 775, 1299, 1343
HpyF10VI	GCNNNNNNNGC	7 cut(s)	548, 557, 921, 1043, 1049, 1283, 1292
HpyF3I	CTNAG	7 cut(s)	18, 546, 589, 633, 1537, 1745, 1752
HpySE526I	ACGT	4 cut(s)	165, 775, 1299, 1343
Hsp92II	CATG	9 cut(s)	225, 313, 376, 1103, 1390, 1553, 1645, 1850, 1859
HspAI	GCGC	1 cut(s)	411
Kzo9I	GATC	9 cut(s)	155, 568, 581, 703, 727, 821, 1402, 1546, 1843
LmnI	GCTCC	3 cut(s)	608, 766, 1283
Lsp1109I	GCAGC	7 cut(s)	230, 526, 554, 650, 1049, 1055, 1273
LweI	GCATC	3 cut(s)	669, 1012, 1039
MabI	ACCWGGT	1 cut(s)	387
MaeI	CTAG	5 cut(s)	366, 686, 1505, 1610, 1817
MaeII	ACGT	4 cut(s)	165, 775, 1299, 1343
MaeIII	GTNAC	8 cut(s)	146, 295, 472, 628, 883, 1262, 1415, 1448
MalI	GATC	9 cut(s)	157, 570, 583, 705, 729, 823, 1404, 1548, 1845
MboI	GATC	9 cut(s)	155, 568, 581, 703, 727, 821, 1402, 1546, 1843
MfeI	CAATTG	2 cut(s)	256, 1083
MflI	RGATCY	3 cut(s)	568, 727, 1402
MhlI	GDGCHC	3 cut(s)	752, 1516, 1701
MluCI	AATT	6 cut(s)	256, 664, 1083, 1239, 1463, 1702
MlyI	GAGTC	2 cut(s)	112, 1693
MroXI	GAANNNNTTC	1 cut(s)	1739
MseI	TTAA	3 cut(s)	78, 210, 393
MslI	CAYNNNNRTG	4 cut(s)	285, 677, 1391, 1800
MspI	CCGG	4 cut(s)	122, 981, 1421, 1435
MunI	CAATTG	2 cut(s)	256, 1083
Mva1269I	GAATGC	1 cut(s)	1248
MvaI	CCWGG	6 cut(s)	389, 764, 819, 1013, 1125, 1269
MwoI	GCNNNNNNNGC	7 cut(s)	548, 557, 921, 1043, 1049, 1283, 1292
NciI	CCSGG	4 cut(s)	123, 982, 1421, 1422
NdeI	CATATG	1 cut(s)	721
NdeII	GATC	9 cut(s)	155, 568, 581, 703, 727, 821, 1402, 1546, 1843
NlaIII	CATG	9 cut(s)	225, 313, 376, 1103, 1390, 1553, 1645, 1850, 1859
NlaIV	GGNNCC	4 cut(s)	68, 871, 916, 1374
NmuCI	GTSAC	4 cut(s)	472, 628, 883, 1448
NsbI	TGCGCA	1 cut(s)	412
NspI	RCATGY	2 cut(s)	225, 1859
OliI	CACNNNNGTG	1 cut(s)	1800
PagI	TCATGA	1 cut(s)	1099
PceI	AGGCCT	1 cut(s)	948
PciI	ACATGT	1 cut(s)	1855
PctI	GAATGC	1 cut(s)	1248
PdmI	GAANNNNTTC	1 cut(s)	1739
PfeI	GAWTC	2 cut(s)	485, 1107
PflFI	GACNNNGTC	1 cut(s)	1370
PflMI	CCANNNNNTGG	1 cut(s)	769
PfoI	TCCNGGA	3 cut(s)	121, 817, 1123
PinAI	ACCGGT	1 cut(s)	1434
PkrI	GCNGC	8 cut(s)	220, 541, 544, 640, 1039, 1042, 1045, 1288
PleI	GAGTC	2 cut(s)	112, 1692
PmaCI	CACGTG	1 cut(s)	776
PmlI	CACGTG	1 cut(s)	776
PpsI	GAGTC	2 cut(s)	112, 1692
Ppu21I	YACGTR	1 cut(s)	776
PpuMI	RGGWCCY	3 cut(s)	869, 1172, 1372
PscI	ACATGT	1 cut(s)	1855
PsiI	TTATAA	1 cut(s)	1317
Psp5II	RGGWCCY	3 cut(s)	869, 1172, 1372
Psp6I	CCWGG	6 cut(s)	387, 762, 817, 1011, 1123, 1267
PspCI	CACGTG	1 cut(s)	776
PspEI	GGTNACC	2 cut(s)	1262, 1415
PspGI	CCWGG	6 cut(s)	387, 762, 817, 1011, 1123, 1267
PspN4I	GGNNCC	4 cut(s)	68, 871, 916, 1374
PspPI	GGNCC	6 cut(s)	66, 416, 734, 869, 1172, 1372
PspPPI	RGGWCCY	3 cut(s)	869, 1172, 1372
PsrI	GAACNNNNNNTAC	2 cut(s)	500, 532
PstI	CTGCAG	1 cut(s)	544
PstNI	CAGNNNCTG	2 cut(s)	769, 1406
PsuI	RGATCY	3 cut(s)	568, 727, 1402
PsyI	GACNNNGTC	1 cut(s)	1370
RsaI	GTAC	5 cut(s)	35, 500, 599, 1059, 1851
RsaNI	GTAC	5 cut(s)	34, 499, 598, 1058, 1850
RseI	CAYNNNNRTG	4 cut(s)	285, 677, 1391, 1800
SaqAI	TTAA	3 cut(s)	78, 210, 393
SatI	GCNGC	8 cut(s)	219, 540, 543, 639, 1038, 1041, 1044, 1287
Sau3AI	GATC	9 cut(s)	155, 568, 581, 703, 727, 821, 1402, 1546, 1843
Sau96I	GGNCC	6 cut(s)	66, 416, 734, 869, 1172, 1372
SchI	GAGTC	2 cut(s)	112, 1693
SduI	GDGCHC	3 cut(s)	752, 1516, 1701
SexAI	ACCWGGT	1 cut(s)	387
SfaNI	GCATC	3 cut(s)	669, 1012, 1039
SfcI	CTRYAG	1 cut(s)	540
SinI	GGWCC	5 cut(s)	66, 734, 869, 1172, 1372
SmaI	CCCGGG	1 cut(s)	1422
SmiMI	CAYNNNNRTG	4 cut(s)	285, 677, 1391, 1800
SmlI	CTYRAG	2 cut(s)	1353, 1798
SmoI	CTYRAG	2 cut(s)	1353, 1798
Sse9I	AATT	6 cut(s)	256, 664, 1083, 1239, 1463, 1702
SseBI	AGGCCT	1 cut(s)	948
SsiI	CCGC	3 cut(s)	192, 1041, 1501
SspMI	CTAG	5 cut(s)	366, 686, 1505, 1610, 1817
StuI	AGGCCT	1 cut(s)	948
StyI	CCWWGG	1 cut(s)	855
TaaI	ACNGT	5 cut(s)	578, 597, 1057, 1456, 1669
TaiI	ACGT	4 cut(s)	168, 778, 1302, 1346
TaqI	TCGA	6 cut(s)	696, 1110, 1209, 1510, 1617, 1682
TaqII	GACCGA	1 cut(s)	722
TasI	AATT	6 cut(s)	256, 664, 1083, 1239, 1463, 1702
TatI	WGTACW	5 cut(s)	33, 498, 597, 1057, 1849
TauI	GCSGC	1 cut(s)	1043
TfiI	GAWTC	2 cut(s)	485, 1107
Tru1I	TTAA	3 cut(s)	78, 210, 393
Tru9I	TTAA	3 cut(s)	78, 210, 393
TscAI	CASTG	7 cut(s)	297, 481, 618, 831, 1012, 1450, 1459
TseFI	GTSAC	4 cut(s)	472, 628, 883, 1448
TseI	GCWGC	7 cut(s)	218, 539, 542, 638, 1037, 1043, 1286
Tsp45I	GTSAC	4 cut(s)	472, 628, 883, 1448
TspDTI	ATGAA	2 cut(s)	1403, 1476
TspGWI	ACGGA	2 cut(s)	168, 1488
TspMI	CCCGGG	1 cut(s)	1420
TspRI	CASTG	7 cut(s)	297, 481, 618, 831, 1012, 1450, 1459
Tth111I	GACNNNGTC	1 cut(s)	1370
Van91I	CCANNNNNTGG	1 cut(s)	769
VneI	GTGCAC	2 cut(s)	748, 1697
VpaK11BI	GGWCC	5 cut(s)	66, 734, 869, 1172, 1372
XagI	CCTNNNNNAGG	1 cut(s)	942
XapI	RAATTY	1 cut(s)	1463
XceI	RCATGY	2 cut(s)	225, 1859
XcmI	CCANNNNNNNNNTGG	2 cut(s)	853, 973
XmaI	CCCGGG	1 cut(s)	1420
XmiI	GTMKAC	1 cut(s)	1365
XmnI	GAANNNNTTC	1 cut(s)	1739
XspI	CTAG	5 cut(s)	366, 686, 1505, 1610, 1817

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.