Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0003333

Physical Location & Seq

Genomic Coordinates Reverse (-)

38993341 .. 38997482

Gene Structure 4142 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG365400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1779 bp

ATGGCCTCCTCCTTTCTCTGTTCCTCTGTTCAGAACAGACTACTTCAATACAGAGCAGTGCCGAAGGCCTTGCTCTGTTTCACTCTTTGTTACGTACTGTTGTTATCTCTCTCTGTGAGCTCAGCTTCCGGCCAGTCGTTTGCCTGCGGCGACGGTGGCAGAAGCTTCCCGTTCTGCGACAAGTCGTTGGCGGCCGATGCGCGGGTGGTGGACCTGGTGCAGAGGCTGACATTGCAGGAGAAGATTACATTTCTGGTGGACAGTGCAGGGAATGTGAGCAGGCTTGGAATACCCAACTACCAGTGGTGGTCGGAGGCTTTACACGGAGTGTCGTCCATCGGCCGCCCGGGGGCCAAATATTCGACTGACATTCCGGGAGCTACCAGCTTCCCTCAGCCCATTTTGACCGCCGCGTCGTTCAACAACTCACTCTACGAAGCCATTGGAAGGGTGGTGTCAACTGAGGCCAGAGCAATGTACAATATGGGATTGGCAGGATTGACATTCTGGGCCCCAAACATTAACATTTTCCGAGACCCGAGATGGGGAAGAGGCCAGGAGACTCCGGGAGAAGACCCATTGCTCACGAGTAACTACAGTTCGGGTTACGTTAGAGGTCTTCAACAAACCGATAGCGAAGACAAAAACAGGCTTAAAGTTGCAGCATGTTGTAAACATTATACAGCCTATGATTTGGACCATTGGAACGGATATGACAGATATACCTTCAATGCAGTGGTAACAAAACAAGATATGGATGATACATTTCAACCACCATTCAGAAGTTGTGTTCTTGATGGGAATGCTGCTAGTGTCATGTGTTCATACCAACAGGTTAATGGAAAACCAACCTGCGCAGACCCAGACCTTCTTTCTGGGGTTATCCGAGGCGAATGGAAGTTGAATGGATACATAGTCACCGATTGTGATTCAATAGAGGTGTACTACGACAACCAACACTACACCAAGACACCAGAAGAAGCTGCAGCTACGGCTATATTGGCAGGAGTGGATCTAGACTGTGGATTTTTCCTAAGCAATTACACAGAAGGAGCAGTGAGAGGAGGACTTATAACTGAGGCAGCCATTGACAAGGCCATCACAAACAATTTTGGCACTTTGATGCGTCTAGGCTTCTTCGATGGTGATCCAAGCAAGCAACCATATGGAGATCTCGGTCCAAAGGATGTGTGCACTCCAGAGAACCAGGAGCTGGCACGTGAAACCGCGAGACAAGGGATAGTGTTGCTCAAGAACACTCCAGAATCACTGCCTCTGTCTCCAACAGCCATCAAATCCTTGGCAGTTATAGGTCCCAATAGCAATGCCACAAACACTATGATTGGCAACTACGCAGGCACCCCTTGCAACTATACAACTCCTTTGCAAGGCCTAACAGCCGTAGTTTCCACAACTTTGGTGGCCGGGTGCGTTGATGTGGCTTGTGGCACTGCCCAGGTAGATGATGCTACCAAGTTAGCAGCCACAGCAGATGCAACTGTACTTATAGTGGGTGCAGATCTATCAATAGAGGCAGAGAGTCATGATAGAACCGACCTCTATCTTCCAGGACAGCAAACTCTTCTAATAACTGAAGTAGCGAAGGCTTCTAAAGGACCTGTAATCCTTGTCATAATGTCTGGAGGAGGGTTCGATATTACCTTTGCAAAAAATGATGATAAAATTATAAGCATTCTATGGGTTGGTTACCCCGGCGAAGCTGGTGGAGCTGCCATTGCTGACGTTATTTTTGGCTTTTATAATCCAAGTAAGCTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0002376 GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005576 GO:0005618 GO:0005623 GO:0005975 GO:0005976 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009044 GO:0009056 GO:0009057 GO:0009605 GO:0009607 GO:0009627 GO:0009814 GO:0009987 GO:0010383 GO:0010410 GO:0016052 GO:0016787 GO:0016798 GO:0030312 GO:0031221 GO:0031222 GO:0043170 GO:0043207 GO:0044036 GO:0044237 GO:0044238 GO:0044260 GO:0044464 GO:0045087 GO:0045491 GO:0045493 GO:0046556 GO:0048046 GO:0050896 GO:0051704 GO:0051707 GO:0071554 GO:0071704 GO:0071944 GO:0097599 GO:0098542 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00520 ko01100 map00520 map01100

Pfam Domains

Protein Families

Fn3-like Glyco_hydro_3 Glyco_hydro_3_C

Protein Analysis

592

Amino Acids

63.5

Weight (kDa)

4.81

Isoelectric Point (pI)

34.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_3	PF00933	126 - 367	2.1e-33	Glycosyl hydrolase family 3 N terminal domain
Glyco_hydro_3_C	PF01915	414 - 590	2.2e-38	Glycosyl hydrolase family 3 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003333)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G09730 AT5G64570 AT5G64570 AT5G64570
fragaria_vesca	FvH4_5g30690 FvH4_5g30710 FvH4_5g30710 FvH4_5g30710 FvH4_5g30710
malus_domestica	MD08G1221800.v1.1 MD15G1414100.v1.1
prunus_persica	Prupe.1G559400_v2.0.a1 Prupe.1G559400_v2.0.a1
pyrus_communis	pycom08g19240 pycom15g36840
rosa_chinensis	RchiOBHm_Chr7g0225551 RchiOBHm_Chr7g0225581
rosa_laevigata	RLG00000001804 RLG00000001806
rosa_multiflora	Rmu_co8377913.1_g000001 Rmu_sc0003876.1_g000021 Rmu_sc0006321.1_g000006
rosa_roxburghii	Rroxscaffold_3G00233670 Rroxscaffold_3G00233690
rosa_rugosa	Rorug07G0231600 Rorug07G0231800
rosa_samantha	Rh7AG372300 Rh7AG372500 Rh7BG365400 Rh7BG365500 Rh7CG390600 Rh7CG390800 Rh7DG376200 Rh7DG376300
rosa_wichuraiana	Rw7G031750 Rw7G031760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	1073, 1688, 1761
AasI	GACNNNNNNGTC	1 cut(s)	412
Acc16I	TGCGCA	1 cut(s)	856
Acc36I	ACCTGC	1 cut(s)	860
AccB1I	GGYRCC	1 cut(s)	1358
AccB7I	CCANNNNNTGG	1 cut(s)	1213
AccII	CGCG	3 cut(s)	202, 413, 1229
AciI	CCGC	7 cut(s)	147, 191, 202, 343, 408, 411, 1227
AclWI	GGATC	2 cut(s)	1020, 1142
AcoI	YGGCCR	4 cut(s)	130, 192, 340, 1422
AcuI	CTGAAG	1 cut(s)	1614
AcvI	CACGTG	1 cut(s)	1220
AdeI	CACNNNGTG	1 cut(s)	328
AfaI	GTAC	4 cut(s)	96, 479, 944, 1503
AfiI	CCNNNNNNNGG	7 cut(s)	201, 349, 447, 544, 545, 1213, 1388
AgsI	TTSAA	7 cut(s)	47, 421, 623, 730, 770, 904, 933
AjnI	CCWGG	5 cut(s)	213, 555, 1206, 1455, 1567
Alw21I	GWGCWC	2 cut(s)	122, 1196
Alw26I	GTCTC	4 cut(s)	528, 554, 1225, 1284
Alw44I	GTGCAC	1 cut(s)	1192
AlwI	GGATC	2 cut(s)	1020, 1142
AlwNI	CAGNNNCTG	2 cut(s)	226, 1213
Ama87I	CYCGRG	2 cut(s)	346, 538
ApaI	GGGCCC	1 cut(s)	514
ApaLI	GTGCAC	1 cut(s)	1192
ApeKI	GCWGC	7 cut(s)	662, 806, 983, 986, 1082, 1481, 1730
ArsI	GACNNNNNNTTYG	2 cut(s)	1733, 1765
AspLEI	GCGC	2 cut(s)	202, 857
AspS9I	GGNCC	8 cut(s)	211, 351, 510, 511, 697, 1178, 1313, 1616
AsuC2I	CCSGG	6 cut(s)	347, 348, 375, 567, 1426, 1713
AsuHPI	GGTGA	2 cut(s)	910, 1157
AvaI	CYCGRG	2 cut(s)	346, 538
AvaII	GGWCC	5 cut(s)	211, 697, 1178, 1313, 1616
BaeGI	GKGCMC	2 cut(s)	514, 1196
BanI	GGYRCC	1 cut(s)	1358
BanII	GRGCYC	2 cut(s)	122, 514
BauI	CACGAG	1 cut(s)	586
BbrPI	CACGTG	1 cut(s)	1220
BbsI	GAAGAC	3 cut(s)	579, 611, 645
Bbv12I	GWGCWC	2 cut(s)	122, 1196
BbvCI	CCTCAGC	1 cut(s)	393
BbvI	GCAGC	7 cut(s)	674, 793, 970, 998, 1094, 1493, 1717
BccI	CCATC	6 cut(s)	344, 537, 791, 1106, 1136, 1298
BceAI	ACGGC	2 cut(s)	1008, 1385
BcgI	CGANNNNNNTGC	2 cut(s)	52, 86
BciT130I	CCWGG	5 cut(s)	215, 557, 1208, 1457, 1569
BciVI	GTATCC	1 cut(s)	902
BcnI	CCSGG	6 cut(s)	347, 348, 375, 567, 1426, 1713
BcoDI	GTCTC	4 cut(s)	528, 554, 1225, 1284
BfaI	CTAG	3 cut(s)	810, 1016, 1130
BfmI	CTRYAG	2 cut(s)	595, 984
BfuAI	ACCTGC	1 cut(s)	860
BfuI	GTATCC	1 cut(s)	902
BglII	AGATCT	2 cut(s)	1171, 1519
BlpI	GCTNAGC	1 cut(s)	121
Bme18I	GGWCC	5 cut(s)	211, 697, 1178, 1313, 1616
BmeT110I	CYCGRG	2 cut(s)	346, 538
BmgT120I	GGNCC	8 cut(s)	211, 351, 510, 511, 697, 1178, 1313, 1616
BmiI	GGNNCC	5 cut(s)	352, 512, 513, 1315, 1360
BmsI	GCATC	4 cut(s)	187, 1113, 1456, 1483
BpiI	GAAGAC	3 cut(s)	579, 611, 645
BpmI	CTGGAG	3 cut(s)	1182, 1245, 1662
Bpu10I	CCTNAGC	2 cut(s)	393, 1034
Bpu1102I	GCTNAGC	1 cut(s)	121
BpuEI	CTTGAG	1 cut(s)	1235
BpuMI	CCSGG	6 cut(s)	347, 348, 375, 567, 1426, 1713
BsaAI	YACGTR	2 cut(s)	94, 1220
BsaBI	GATNNNNATC	1 cut(s)	1146
BsaI	GGTCTC	1 cut(s)	528
BsaJI	CCNNGG	6 cut(s)	346, 347, 886, 1299, 1455, 1711
Bsc4I	CCNNNNNNNGG	7 cut(s)	201, 349, 447, 544, 545, 1213, 1388
Bse1I	ACTGG	2 cut(s)	133, 301
Bse3DI	GCAATG	5 cut(s)	230, 480, 578, 1330, 1734
Bse8I	GATNNNNATC	1 cut(s)	1146
BseBI	CCWGG	5 cut(s)	215, 557, 1208, 1457, 1569
BseDI	CCNNGG	6 cut(s)	346, 347, 886, 1299, 1455, 1711
BseGI	GGATG	2 cut(s)	763, 1192
BseJI	GATNNNNATC	1 cut(s)	1146
BseLI	CCNNNNNNNGG	7 cut(s)	201, 349, 447, 544, 545, 1213, 1388
BseMI	GCAATG	5 cut(s)	230, 480, 578, 1330, 1734
BseMII	CTCAG	4 cut(s)	135, 407, 453, 1068
BseNI	ACTGG	2 cut(s)	133, 301
BseRI	GAGGAG	2 cut(s)	1077, 1659
BseSI	GKGCMC	2 cut(s)	514, 1196
BseX3I	CGGCCG	2 cut(s)	192, 340
BseXI	GCAGC	7 cut(s)	674, 793, 970, 998, 1094, 1493, 1717
BsgI	GTGCAG	3 cut(s)	239, 285, 1536
Bsh1236I	CGCG	3 cut(s)	202, 413, 1229
Bsh1285I	CGRYCG	2 cut(s)	195, 343
BshNI	GGYRCC	1 cut(s)	1358
BsiEI	CGRYCG	2 cut(s)	195, 343
BsiHKAI	GWGCWC	2 cut(s)	122, 1196
BsiHKCI	CYCGRG	2 cut(s)	346, 538
BsiSI	CCGG	6 cut(s)	129, 347, 374, 566, 1425, 1713
BslFI	GGGAC	1 cut(s)	1299
BslI	CCNNNNNNNGG	7 cut(s)	201, 349, 447, 544, 545, 1213, 1388
BsmAI	GTCTC	4 cut(s)	528, 554, 1225, 1284
BsmFI	GGGAC	1 cut(s)	1299
BsmI	GAATGC	2 cut(s)	808, 1692
Bso31I	GGTCTC	1 cut(s)	528
BsoBI	CYCGRG	2 cut(s)	346, 538
Bsp120I	GGGCCC	1 cut(s)	510
Bsp1286I	GDGCHC	3 cut(s)	122, 514, 1196
Bsp1407I	TGTACA	1 cut(s)	477
Bsp143I	GATC	4 cut(s)	1012, 1147, 1171, 1519
Bsp1720I	GCTNAGC	1 cut(s)	121
BspACI	CCGC	7 cut(s)	147, 191, 202, 343, 408, 411, 1227
BspCNI	CTCAG	4 cut(s)	134, 406, 454, 1069
BspFNI	CGCG	3 cut(s)	202, 413, 1229
BspHI	TCATGA	1 cut(s)	1543
BspLI	GGNNCC	5 cut(s)	352, 512, 513, 1315, 1360
BspMAI	CTGCAG	1 cut(s)	988
BspMI	ACCTGC	1 cut(s)	860
BspPI	GGATC	2 cut(s)	1020, 1142
BspT107I	GGYRCC	1 cut(s)	1358
BspTNI	GGTCTC	1 cut(s)	528
BsrDI	GCAATG	5 cut(s)	230, 480, 578, 1330, 1734
BsrGI	TGTACA	1 cut(s)	477
BsrI	ACTGG	2 cut(s)	133, 301
BssECI	CCNNGG	6 cut(s)	346, 347, 886, 1299, 1455, 1711
BssMI	GATC	4 cut(s)	1012, 1147, 1171, 1519
BssSI	CACGAG	1 cut(s)	586
BssT1I	CCWWGG	1 cut(s)	1299
Bst2BI	CACGAG	1 cut(s)	586
Bst2UI	CCWGG	5 cut(s)	215, 557, 1208, 1457, 1569
Bst4CI	ACNGT	6 cut(s)	99, 155, 263, 599, 1022, 1501
Bst6I	CTCTTC	2 cut(s)	544, 1587
BstAPI	GCANNNNNTGC	1 cut(s)	1365
BstAUI	TGTACA	1 cut(s)	477
BstBAI	YACGTR	2 cut(s)	94, 1220
BstC8I	GCNNGC	5 cut(s)	145, 281, 1157, 1215, 1357
BstDEI	CTNAG	5 cut(s)	121, 393, 462, 1034, 1077
BstEII	GGTNACC	1 cut(s)	1706
BstENI	CCTNNNNNAGG	1 cut(s)	1386
BstF5I	GGATG	2 cut(s)	763, 1192
BstFNI	CGCG	3 cut(s)	202, 413, 1229
BstHHI	GCGC	2 cut(s)	202, 857
BstKTI	GATC	4 cut(s)	1015, 1150, 1174, 1522
BstMAI	GTCTC	4 cut(s)	528, 554, 1225, 1284
BstMBI	GATC	4 cut(s)	1012, 1147, 1171, 1519
BstMCI	CGRYCG	2 cut(s)	195, 343
BstMWI	GCNNNNNNNGC	9 cut(s)	156, 197, 232, 992, 1001, 1365, 1487, 1727, 1736
BstNI	CCWGG	5 cut(s)	215, 557, 1208, 1457, 1569
BstNSI	RCATGY	1 cut(s)	669
BstPI	GGTNACC	1 cut(s)	1706
BstSFI	CTRYAG	2 cut(s)	595, 984
BstSLI	GKGCMC	2 cut(s)	514, 1196
BstSNI	TACGTA	1 cut(s)	94
BstUI	CGCG	3 cut(s)	202, 413, 1229
BstV1I	GCAGC	7 cut(s)	674, 793, 970, 998, 1094, 1493, 1717
BstV2I	GAAGAC	3 cut(s)	579, 611, 645
BstX2I	RGATCY	3 cut(s)	1012, 1171, 1519
BstXI	CCANNNNNNTGG	1 cut(s)	1417
BstYI	RGATCY	3 cut(s)	1012, 1171, 1519
BstZI	CGGCCG	2 cut(s)	192, 340
BsuI	GTATCC	1 cut(s)	902
BtsCI	GGATG	2 cut(s)	763, 1192
BtsI	GCAGTG	5 cut(s)	63, 741, 1062, 1268, 1449
BtsIMutI	CAGTG	7 cut(s)	63, 268, 308, 741, 1062, 1268, 1449
BveI	ACCTGC	1 cut(s)	860
Cac8I	GCNNGC	5 cut(s)	145, 281, 1157, 1215, 1357
CaiI	CAGNNNCTG	2 cut(s)	226, 1213
CciI	TCATGA	1 cut(s)	1543
CfoI	GCGC	2 cut(s)	202, 857
Cfr13I	GGNCC	8 cut(s)	211, 351, 510, 511, 697, 1178, 1313, 1616
Cfr9I	CCCGGG	1 cut(s)	346
CseI	GACGC	2 cut(s)	402, 1115
CsiI	ACCWGGT	1 cut(s)	213
Csp6I	GTAC	4 cut(s)	95, 478, 943, 1502
CspCI	CAANNNNNGTGG	2 cut(s)	1401, 1436
CviAII	CATG	3 cut(s)	666, 817, 1544
CviQI	GTAC	4 cut(s)	95, 478, 943, 1502
DdeI	CTNAG	5 cut(s)	121, 393, 462, 1034, 1077
DpnI	GATC	4 cut(s)	1014, 1149, 1173, 1521
DpnII	GATC	4 cut(s)	1012, 1147, 1171, 1519
DraIII	CACNNNGTG	1 cut(s)	328
DrdI	GACNNNNNNGTC	1 cut(s)	412
DseDI	GACNNNNNNGTC	1 cut(s)	412
EaeI	YGGCCR	4 cut(s)	130, 192, 340, 1422
EagI	CGGCCG	2 cut(s)	192, 340
Eam1104I	CTCTTC	2 cut(s)	544, 1587
EarI	CTCTTC	2 cut(s)	544, 1587
Ecl136II	GAGCTC	1 cut(s)	120
EclXI	CGGCCG	2 cut(s)	192, 340
Eco105I	TACGTA	1 cut(s)	94
Eco130I	CCWWGG	1 cut(s)	1299
Eco147I	AGGCCT	2 cut(s)	68, 1392
Eco24I	GRGCYC	2 cut(s)	122, 514
Eco31I	GGTCTC	1 cut(s)	528
Eco47I	GGWCC	5 cut(s)	211, 697, 1178, 1313, 1616
Eco52I	CGGCCG	2 cut(s)	192, 340
Eco53kI	GAGCTC	1 cut(s)	120
Eco57I	CTGAAG	1 cut(s)	1614
Eco72I	CACGTG	1 cut(s)	1220
Eco88I	CYCGRG	2 cut(s)	346, 538
Eco91I	GGTNACC	1 cut(s)	1706
EcoICRI	GAGCTC	1 cut(s)	120
EcoNI	CCTNNNNNAGG	1 cut(s)	1386
EcoO109I	RGGNCCY	3 cut(s)	511, 1313, 1616
EcoO65I	GGTNACC	1 cut(s)	1706
EcoRII	CCWGG	5 cut(s)	213, 555, 1206, 1455, 1567
EcoT14I	CCWWGG	1 cut(s)	1299
EcoT38I	GRGCYC	2 cut(s)	122, 514
ErhI	CCWWGG	1 cut(s)	1299
FaeI	CATG	3 cut(s)	669, 820, 1547
FaqI	GGGAC	1 cut(s)	1299
FatI	CATG	3 cut(s)	665, 816, 1543
FauI	CCCGC	1 cut(s)	195
FauNDI	CATATG	1 cut(s)	1165
FokI	GGATG	2 cut(s)	770, 1199
FriOI	GRGCYC	2 cut(s)	122, 514
FspBI	CTAG	3 cut(s)	810, 1016, 1130
FspI	TGCGCA	1 cut(s)	856
GlaI	GCGC	2 cut(s)	201, 856
GsuI	CTGGAG	3 cut(s)	1182, 1245, 1662
HapII	CCGG	6 cut(s)	129, 347, 374, 566, 1425, 1713
HgaI	GACGC	2 cut(s)	402, 1115
HhaI	GCGC	2 cut(s)	202, 857
Hin1II	CATG	3 cut(s)	669, 820, 1547
Hin6I	GCGC	2 cut(s)	200, 855
HinP1I	GCGC	2 cut(s)	200, 855
HincII	GTYRAC	1 cut(s)	459
HindII	GTYRAC	1 cut(s)	459
HindIII	AAGCTT	1 cut(s)	163
HinfI	GANTC	4 cut(s)	562, 929, 1265, 1540
HpaII	CCGG	6 cut(s)	129, 347, 374, 566, 1425, 1713
HphI	GGTGA	2 cut(s)	910, 1157
Hpy166II	GTNNAC	6 cut(s)	211, 259, 459, 674, 943, 1194
Hpy188I	TCNGA	5 cut(s)	33, 313, 533, 782, 887
Hpy188III	TCNNGA	8 cut(s)	586, 794, 1016, 1199, 1252, 1262, 1544, 1641
Hpy8I	GTNNAC	6 cut(s)	211, 259, 459, 674, 943, 1194
Hpy99I	CGWCG	2 cut(s)	155, 418
HpyAV	CCTTC	6 cut(s)	58, 441, 736, 878, 1043, 1597
HpyCH4III	ACNGT	6 cut(s)	99, 155, 263, 599, 1022, 1501
HpyCH4IV	ACGT	4 cut(s)	93, 609, 1219, 1743
HpyF10VI	GCNNNNNNNGC	9 cut(s)	156, 197, 232, 992, 1001, 1365, 1487, 1727, 1736
HpyF3I	CTNAG	5 cut(s)	121, 393, 462, 1034, 1077
HpySE526I	ACGT	4 cut(s)	93, 609, 1219, 1743
Hsp92II	CATG	3 cut(s)	669, 820, 1547
HspAI	GCGC	2 cut(s)	200, 855
Kzo9I	GATC	4 cut(s)	1012, 1147, 1171, 1519
LmnI	GCTCC	4 cut(s)	377, 1052, 1210, 1727
Lsp1109I	GCAGC	7 cut(s)	674, 793, 970, 998, 1094, 1493, 1717
LweI	GCATC	4 cut(s)	187, 1113, 1456, 1483
MabI	ACCWGGT	1 cut(s)	213
MaeI	CTAG	3 cut(s)	810, 1016, 1130
MaeII	ACGT	4 cut(s)	93, 609, 1219, 1743
MaeIII	GTNAC	6 cut(s)	89, 590, 605, 739, 916, 1706
MalI	GATC	4 cut(s)	1014, 1149, 1173, 1521
MboI	GATC	4 cut(s)	1012, 1147, 1171, 1519
MboII	GAAGA	9 cut(s)	253, 561, 584, 611, 650, 989, 1129, 1556, 1574
MflI	RGATCY	3 cut(s)	1012, 1171, 1519
MhlI	GDGCHC	3 cut(s)	122, 514, 1196
MluCI	AATT	3 cut(s)	1039, 1108, 1683
MlyI	GAGTC	2 cut(s)	556, 1549
MmeI	TCCRAC	2 cut(s)	291, 1307
MseI	TTAA	3 cut(s)	522, 654, 837
MslI	CAYNNNNRTG	1 cut(s)	1121
MspI	CCGG	6 cut(s)	129, 347, 374, 566, 1425, 1713
Mva1269I	GAATGC	2 cut(s)	808, 1692
MvaI	CCWGG	5 cut(s)	215, 557, 1208, 1457, 1569
MvnI	CGCG	3 cut(s)	202, 413, 1229
MwoI	GCNNNNNNNGC	9 cut(s)	156, 197, 232, 992, 1001, 1365, 1487, 1727, 1736
NciI	CCSGG	6 cut(s)	347, 348, 375, 567, 1426, 1713
NdeI	CATATG	1 cut(s)	1165
NdeII	GATC	4 cut(s)	1012, 1147, 1171, 1519
NlaIII	CATG	3 cut(s)	669, 820, 1547
NlaIV	GGNNCC	5 cut(s)	352, 512, 513, 1315, 1360
NmuCI	GTSAC	1 cut(s)	916
NsbI	TGCGCA	1 cut(s)	856
NspI	RCATGY	1 cut(s)	669
PagI	TCATGA	1 cut(s)	1543
PceI	AGGCCT	2 cut(s)	68, 1392
PctI	GAATGC	2 cut(s)	808, 1692
PfeI	GAWTC	2 cut(s)	929, 1265
PflMI	CCANNNNNTGG	1 cut(s)	1213
PfoI	TCCNGGA	3 cut(s)	373, 565, 1567
PleI	GAGTC	2 cut(s)	556, 1548
PmaCI	CACGTG	1 cut(s)	1220
PmlI	CACGTG	1 cut(s)	1220
PpsI	GAGTC	2 cut(s)	556, 1548
Ppu21I	YACGTR	2 cut(s)	94, 1220
PpuMI	RGGWCCY	2 cut(s)	1313, 1616
PsiI	TTATAA	3 cut(s)	1073, 1688, 1761
Psp124BI	GAGCTC	1 cut(s)	122
Psp5II	RGGWCCY	2 cut(s)	1313, 1616
Psp6I	CCWGG	5 cut(s)	213, 555, 1206, 1455, 1567
PspCI	CACGTG	1 cut(s)	1220
PspEI	GGTNACC	1 cut(s)	1706
PspGI	CCWGG	5 cut(s)	213, 555, 1206, 1455, 1567
PspN4I	GGNNCC	5 cut(s)	352, 512, 513, 1315, 1360
PspOMI	GGGCCC	1 cut(s)	510
PspPI	GGNCC	8 cut(s)	211, 351, 510, 511, 697, 1178, 1313, 1616
PspPPI	RGGWCCY	2 cut(s)	1313, 1616
PsrI	GAACNNNNNNTAC	2 cut(s)	583, 615
PstI	CTGCAG	1 cut(s)	988
PstNI	CAGNNNCTG	2 cut(s)	226, 1213
PsuI	RGATCY	3 cut(s)	1012, 1171, 1519
RsaI	GTAC	4 cut(s)	96, 479, 944, 1503
RsaNI	GTAC	4 cut(s)	95, 478, 943, 1502
RseI	CAYNNNNRTG	1 cut(s)	1121
SacI	GAGCTC	1 cut(s)	122
SaqAI	TTAA	3 cut(s)	522, 654, 837
Sau3AI	GATC	4 cut(s)	1012, 1147, 1171, 1519
Sau96I	GGNCC	8 cut(s)	211, 351, 510, 511, 697, 1178, 1313, 1616
SchI	GAGTC	2 cut(s)	556, 1549
SduI	GDGCHC	3 cut(s)	122, 514, 1196
SexAI	ACCWGGT	1 cut(s)	213
SfaNI	GCATC	4 cut(s)	187, 1113, 1456, 1483
SfcI	CTRYAG	2 cut(s)	595, 984
SinI	GGWCC	5 cut(s)	211, 697, 1178, 1313, 1616
SmaI	CCCGGG	1 cut(s)	348
SmiMI	CAYNNNNRTG	1 cut(s)	1121
SmlI	CTYRAG	1 cut(s)	1250
SmoI	CTYRAG	1 cut(s)	1250
SnaBI	TACGTA	1 cut(s)	94
Sse9I	AATT	3 cut(s)	1039, 1108, 1683
SseBI	AGGCCT	2 cut(s)	68, 1392
SsiI	CCGC	7 cut(s)	147, 191, 202, 343, 408, 411, 1227
SspI	AATATT	1 cut(s)	359
SspMI	CTAG	3 cut(s)	810, 1016, 1130
SstI	GAGCTC	1 cut(s)	122
StuI	AGGCCT	2 cut(s)	68, 1392
StyI	CCWWGG	1 cut(s)	1299
TaaI	ACNGT	6 cut(s)	99, 155, 263, 599, 1022, 1501
TaiI	ACGT	4 cut(s)	96, 612, 1222, 1746
TaqI	TCGA	3 cut(s)	362, 1140, 1653
TaqII	GACCGA	1 cut(s)	1166
TasI	AATT	3 cut(s)	1039, 1108, 1683
TatI	WGTACW	3 cut(s)	477, 942, 1501
TauI	GCSGC	4 cut(s)	150, 194, 345, 413
TfiI	GAWTC	2 cut(s)	929, 1265
Tru1I	TTAA	3 cut(s)	522, 654, 837
Tru9I	TTAA	3 cut(s)	522, 654, 837
TscAI	CASTG	7 cut(s)	63, 268, 308, 741, 1062, 1275, 1456
TseFI	GTSAC	1 cut(s)	916
TseI	GCWGC	7 cut(s)	662, 806, 983, 986, 1082, 1481, 1730
Tsp45I	GTSAC	1 cut(s)	916
TspDTI	ATGAA	1 cut(s)	813
TspGWI	ACGGA	2 cut(s)	339, 723
TspMI	CCCGGG	1 cut(s)	346
TspRI	CASTG	7 cut(s)	63, 268, 308, 741, 1062, 1275, 1456
Van91I	CCANNNNNTGG	1 cut(s)	1213
VneI	GTGCAC	1 cut(s)	1192
VpaK11BI	GGWCC	5 cut(s)	211, 697, 1178, 1313, 1616
XagI	CCTNNNNNAGG	1 cut(s)	1386
XbaI	TCTAGA	1 cut(s)	1015
XceI	RCATGY	1 cut(s)	669
XcmI	CCANNNNNNNNNTGG	4 cut(s)	448, 836, 1297, 1417
XmaI	CCCGGG	1 cut(s)	346
XspI	CTAG	3 cut(s)	810, 1016, 1130

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.