Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004392

Physical Location & Seq

Genomic Coordinates Forward (+)

3324812 .. 3334971

Gene Structure 10160 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G10540.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2106 bp

ATGGCTTCTGAAGATACTCTCTCCTCGAATCCTCTATTGCAGAATTTTGACTTCCCTCCGTTTGACTCCGTTGATGCTCACCATGTCAGACCTGGGATTCGTGCTCTGTTGCAGCAGCTCGAAGCTGAATTGGAGCAGCTAGAAAAAGCTGTAGAGCCTTCATGGCCAAAACTAGTGGAGCCATTAGAGAAGATTATTGATCGGTTATCTGTTGTTTGGGGAATGATCAATCATCTTAAGGCTGTCAAGGACACACCTGAGCTTCGTGCTGCCATTGAAGAAGTTCAGCCGGAGAAGGTGAAGTTCCAGCTCAGGTTGGGACAGAGCAAACCCATTTACAATGCATTTAAGGCTATTCGAGAATCTCCAGACTGGAATTCATTGAGCGAAGCTCGTCAACGATTAGTTGAAGCCCAAATAAAGGAGGCGGTTCTGAGTGGTATTGCTCTTGAAGATGATAAGAGGGAAGAATTTAACAAAATTGAACAGGAACTTGAAAAACTTTCTCATAAGTTTTCTGAGAATGTTTTGGACGCTACAAAGAAGTTTGAAAAGTTGATAACAGACAAGAAAGAGATTGAGGGGTTGCCACCATCTGCACTTGGATTGTTCGCACAAGCAGCTGTTTCCAAGGGCCATGAAACTGCAACTGCTGACACTGGACCATGGCTCATTACACTCGATGCTCCTAGTTATCTTCCCGTTATGCAACATGCCAAAAACCGAGCTCTGCGCGAGGAAGTCTACCGTGCTTACTTATCCCGTGCCTCTTCGGGTGATTTAGATAATACAGCAATTATCGACCAAATCTTGAAGCTTCGACTGGAAAAGGCTAAGCTTCTTGGTTACAGAAATTATGCTGAGGTAAGCATGGCCACGAAAATGGCTACTGTGGAGAAAGCAGATGAGCTACTAGAAAAGCTTCGCAGTGCTTCATGGGATCCGGCTGTTCAAGACATAGAAGACCTTAAGAGTTTTGCGAAGAACCAAGGTGCTGCAGAGGCTGACAGTTTGACTCACTGGGACATCACTTTCTGGAGTGAGAGGCTTCGTGAATCCAAATACGATATTAATGAGGAAGAACTGCGACCTTACTTCTCATTGCCAAAGGTTATGGATGCGTTATTCGGTCTAGCTAAGACACTATTTGGAATTGATGTTGTGCCAGCAGACGGTGTAGCGCCGGTCTGGAACAGCGATGTTAGGTTCTACTGTGTCAAAGATTCTTCTGGAAATCCAACTGCTTATTTCTACTTTGATCCCTACTCTCGCCCTTCAGAAAAGAGAGACGGCGCTTGGATGGATGAAGTTTTTTCTCGTAGCCGAGTCATGGCCCAGAAGGGTTCCTCCGTTAGACTCCCTGTTGCTCAAATGGTCTGCAACCAAACTCCACCTGTTGGTGACAAGCCAAGCCTTATGACATTCCGTGAGGTAGAGACTGTGTTCCATGAATTTGGCCATGCTCTTCAGCATATGCTTACCAAAGAGGATGAGGGGCTAGTGGCTGGTATCCGGAATATCGAGTGGGATGCAGTTGAATTACCGTCACAGTTTATGGAGAACTGGTGCTACCACAGGGATACCTTAATGAGCATTGCTAAGCATTATCAAACAGGAGAAACTCTTCCCGAGAATGTATACAAGAAGCTACTGGCTGCAAGAACATTCCGTGCAGGGTCCCTTAGTCTTCGCCAGTTGAAGTTTGCTACAGTTGATCTGGAGCTGCACACAAAATACATGCCAGGTGGGGCAGAGACCATCTACGAAGTTGATCAAAGGGTGTCCATAAAAACACAAGTGATCCCTCCACTTCCTGAAGATAGATTCCTCTGTAGCTTCAGTCATATATTTGCAGGTGGTTATGCAGCTGGATACTACAGTTACAAGTGGGCGGAGGTTTTGTCTGCAGATGCGTTTTCAGCTTTTGAAGATGCTGGGTTGGATGACATTAAGGCTGTCAAAGAAACAGGACAGAGATTCAGAAACACTATACTTGCTCTGGGAGGAGGAAAAGCTCCTCTAAAAGTGTTTGTGGAGTTCAGAGGACGAGAACCTTCCCCAGAGCCTCTGCTCAGACACAATGGACTCTTGGCTGCTTCTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004222 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0005829 GO:0006465 GO:0006508 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0010035 GO:0010038 GO:0010467 GO:0016485 GO:0016787 GO:0019538 GO:0031974 GO:0034641 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043603 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044429 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0048046 GO:0050896 GO:0051604 GO:0070011 GO:0070013 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_M3

Protein Analysis

701

Amino Acids

79.04

Weight (kDa)

5.45

Isoelectric Point (pI)

44.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TOP_N	PF19310	33 - 155	2.3e-57	Neurolysin/Thimet oligopeptidase, N-terminal domain
Peptidase_M3	PF01432	235 - 695	7.6e-137	Peptidase family M3

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004392)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10540 AT5G65620 AT5G65620
fragaria_vesca	FvH4_1g19050 FvH4_1g19050 FvH4_1g19050
malus_domestica	MD01G1044200.v1.1
prunus_persica	Prupe.6G167100_v2.0.a1 Prupe.6G167100_v2.0.a1 Prupe.6G209200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0110061 RchiOBHm_Chr7g0233391
rosa_laevigata	RLG00000001272 RLG00000017783
rosa_multiflora	Rmu_co8163522.1_g000001 Rmu_co8337137.1_g000001 Rmu_sc0008806.1_g000009 Rmu_sc0009935.1_g000003 Rmu_sc0013750.1_g000001 Rmu_sc0024311.1_g000001
rosa_roxburghii	Rroxscaffold_2G00133750
rosa_rugosa	Rorug02G0165400 Rorug02G0165400
rosa_samantha	Rh2AG217200 Rh2BG227200 Rh2CG219400 Rh2DG222900 Rh7CG455700
rosa_wichuraiana	Rw0G010890 Rw2G016780 Rw7G035960 Rw7G035980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1844
Acc36I	ACCTGC	1 cut(s)	1844
AccB7I	CCANNNNNTGG	1 cut(s)	1397
AccI	GTMKAC	2 cut(s)	744, 1638
AccII	CGCG	1 cut(s)	735
AccIII	TCCGGA	1 cut(s)	1512
AciI	CCGC	2 cut(s)	428, 1892
AclWI	GGATC	4 cut(s)	935, 948, 1253, 1795
AcoI	YGGCCR	3 cut(s)	164, 873, 1456
AcsI	RAATTY	4 cut(s)	43, 376, 470, 1451
AcuI	CTGAAG	5 cut(s)	30, 1260, 1451, 1822, 1836
AfiI	CCNNNNNNNGG	4 cut(s)	421, 1172, 1330, 1397
AflII	CTTAAG	2 cut(s)	236, 968
AhlI	ACTAGT	1 cut(s)	172
AjnI	CCWGG	2 cut(s)	91, 1741
Alw21I	GWGCWC	2 cut(s)	106, 730
Alw26I	GTCTC	3 cut(s)	1281, 1430, 1748
AlwI	GGATC	4 cut(s)	935, 948, 1253, 1795
AlwNI	CAGNNNCTG	1 cut(s)	1004
Ama87I	CYCGRG	1 cut(s)	1628
Aor13HI	TCCGGA	1 cut(s)	1512
AoxI	GGCC	5 cut(s)	164, 634, 873, 1332, 1456
ApoI	RAATTY	4 cut(s)	43, 376, 470, 1451
ArsI	GACNNNNNNTTYG	2 cut(s)	81, 113
AseI	ATTAAT	1 cut(s)	1071
Asp700I	GAANNNNTTC	3 cut(s)	282, 921, 1623
AspLEI	GCGC	3 cut(s)	735, 1183, 1295
AspS9I	GGNCC	4 cut(s)	634, 662, 1333, 1677
AsuHPI	GGTGA	4 cut(s)	71, 310, 788, 1412
AvaI	CYCGRG	1 cut(s)	1628
AvaII	GGWCC	2 cut(s)	662, 1677
BaeI	ACNNNNGTAYC	2 cut(s)	1864, 1897
BalI	TGGCCA	3 cut(s)	166, 875, 1458
BamHI	GGATCC	1 cut(s)	940
BanII	GRGCYC	1 cut(s)	730
BbsI	GAAGAC	2 cut(s)	969, 1679
Bbv12I	GWGCWC	2 cut(s)	106, 730
BbvCI	CCTCAGC	1 cut(s)	861
BccI	CCATC	3 cut(s)	601, 1294, 1766
BceAI	ACGGC	1 cut(s)	1306
BcgI	CGANNNNNNTGC	2 cut(s)	1511, 1545
BciT130I	CCWGG	2 cut(s)	93, 1743
BciVI	GTATCC	3 cut(s)	1520, 1573, 1865
BclI	TGATCA	2 cut(s)	225, 1771
BcoDI	GTCTC	3 cut(s)	1281, 1430, 1748
BcuI	ACTAGT	1 cut(s)	172
BfaI	CTAG	6 cut(s)	140, 173, 690, 914, 1133, 1499
BfmI	CTRYAG	6 cut(s)	150, 996, 1707, 1831, 1876, 1905
BfoI	RGCGCY	2 cut(s)	1184, 1296
BfrI	CTTAAG	2 cut(s)	236, 968
BfuAI	ACCTGC	1 cut(s)	1844
BfuI	GTATCC	3 cut(s)	1520, 1573, 1865
BglI	GCCNNNNNGGC	1 cut(s)	163
BlpI	GCTNAGC	2 cut(s)	834, 1599
Bme1390I	CCNGG	2 cut(s)	93, 1743
Bme18I	GGWCC	2 cut(s)	662, 1677
BmeT110I	CYCGRG	1 cut(s)	1628
BmgT120I	GGNCC	4 cut(s)	634, 662, 1333, 1677
BmiI	GGNNCC	5 cut(s)	180, 942, 1345, 1678, 1679
BmrFI	CCNGG	2 cut(s)	93, 1743
BmrI	ACTGGG	1 cut(s)	1030
BmsI	GCATC	6 cut(s)	64, 673, 1108, 1519, 1900, 1921
BmuI	ACTGGG	1 cut(s)	1030
BpiI	GAAGAC	2 cut(s)	969, 1679
BplI	GAGNNNNNCTC	2 cut(s)	376, 408
BpmI	CTGGAG	3 cut(s)	351, 1057, 1739
Bpu10I	CCTNAGC	3 cut(s)	258, 311, 861
Bpu1102I	GCTNAGC	2 cut(s)	834, 1599
BsaI	GGTCTC	1 cut(s)	1748
BsaJI	CCNNGG	4 cut(s)	92, 630, 665, 988
BsaWI	WCCGGW	1 cut(s)	1512
BsaXI	ACNNNNNCTCC	4 cut(s)	1550, 1580, 1886, 1916
Bsc4I	CCNNNNNNNGG	4 cut(s)	421, 1172, 1330, 1397
Bse118I	RCCGGY	1 cut(s)	1183
Bse1I	ACTGG	7 cut(s)	377, 664, 828, 1025, 1568, 1656, 1693
Bse3DI	GCAATG	2 cut(s)	1100, 1593
BseAI	TCCGGA	1 cut(s)	1512
BseBI	CCWGG	2 cut(s)	93, 1743
BseDI	CCNNGG	4 cut(s)	92, 630, 665, 988
BseGI	GGATG	6 cut(s)	1123, 1305, 1309, 1495, 1534, 1948
BseLI	CCNNNNNNNGG	4 cut(s)	421, 1172, 1330, 1397
BseMI	GCAATG	2 cut(s)	1100, 1593
BseMII	CTCAG	6 cut(s)	249, 325, 425, 510, 852, 2086
BseNI	ACTGG	7 cut(s)	377, 664, 828, 1025, 1568, 1656, 1693
BseRI	GAGGAG	3 cut(s)	13, 2007, 2019
BseYI	CCCAGC	1 cut(s)	1934
BsgI	GTGCAG	3 cut(s)	582, 1692, 1709
Bsh1236I	CGCG	1 cut(s)	735
BshFI	GGCC	5 cut(s)	166, 636, 875, 1334, 1458
BsiHKAI	GWGCWC	2 cut(s)	106, 730
BsiHKCI	CYCGRG	1 cut(s)	1628
BsiSI	CCGG	4 cut(s)	290, 944, 1184, 1513
BslFI	GGGAC	3 cut(s)	333, 1037, 1663
BslI	CCNNNNNNNGG	4 cut(s)	421, 1172, 1330, 1397
BsmAI	GTCTC	3 cut(s)	1281, 1430, 1748
BsmBI	CGTCTC	1 cut(s)	1281
BsmFI	GGGAC	3 cut(s)	333, 1037, 1663
BsnI	GGCC	5 cut(s)	166, 636, 875, 1334, 1458
Bso31I	GGTCTC	1 cut(s)	1748
BsoBI	CYCGRG	1 cut(s)	1628
Bsp1286I	GDGCHC	2 cut(s)	106, 730
Bsp13I	TCCGGA	1 cut(s)	1512
Bsp143I	GATC	7 cut(s)	199, 225, 940, 1258, 1714, 1771, 1800
Bsp1720I	GCTNAGC	2 cut(s)	834, 1599
Bsp19I	CCATGG	1 cut(s)	665
BspACI	CCGC	2 cut(s)	428, 1892
BspANI	GGCC	5 cut(s)	166, 636, 875, 1334, 1458
BspCNI	CTCAG	6 cut(s)	250, 324, 426, 511, 853, 2085
BspEI	TCCGGA	1 cut(s)	1512
BspFNI	CGCG	1 cut(s)	735
BspLI	GGNNCC	5 cut(s)	180, 942, 1345, 1678, 1679
BspMAI	CTGCAG	2 cut(s)	1000, 1909
BspMI	ACCTGC	1 cut(s)	1844
BspPI	GGATC	4 cut(s)	935, 948, 1253, 1795
BspQI	GCTCTTC	1 cut(s)	1470
BspTI	CTTAAG	2 cut(s)	236, 968
BspTNI	GGTCTC	1 cut(s)	1748
BsrDI	GCAATG	2 cut(s)	1100, 1593
BsrFI	RCCGGY	1 cut(s)	1183
BsrI	ACTGG	7 cut(s)	377, 664, 828, 1025, 1568, 1656, 1693
BssAI	RCCGGY	1 cut(s)	1183
BssECI	CCNNGG	4 cut(s)	92, 630, 665, 988
BssMI	GATC	7 cut(s)	199, 225, 940, 1258, 1714, 1771, 1800
BssNAI	GTATAC	1 cut(s)	1639
BssT1I	CCWWGG	3 cut(s)	630, 665, 988
Bst1107I	GTATAC	1 cut(s)	1639
Bst2UI	CCWGG	2 cut(s)	93, 1743
Bst6I	CTCTTC	3 cut(s)	775, 1470, 1629
BstAFI	CTTAAG	2 cut(s)	236, 968
BstC8I	GCNNGC	1 cut(s)	1167
BstDSI	CCRYGG	1 cut(s)	665
BstF5I	GGATG	6 cut(s)	1123, 1305, 1309, 1495, 1534, 1948
BstFNI	CGCG	1 cut(s)	735
BstH2I	RGCGCY	2 cut(s)	1184, 1296
BstHHI	GCGC	3 cut(s)	735, 1183, 1295
BstKTI	GATC	7 cut(s)	202, 228, 943, 1261, 1717, 1774, 1803
BstMAI	GTCTC	3 cut(s)	1281, 1430, 1748
BstMBI	GATC	7 cut(s)	199, 225, 940, 1258, 1714, 1771, 1800
BstMWI	GCNNNNNNNGC	6 cut(s)	163, 350, 620, 1001, 1919, 2099
BstNI	CCWGG	2 cut(s)	93, 1743
BstNSI	RCATGY	2 cut(s)	716, 1741
BstSCI	CCNGG	2 cut(s)	91, 1741
BstSFI	CTRYAG	6 cut(s)	150, 996, 1707, 1831, 1876, 1905
BstUI	CGCG	1 cut(s)	735
BstV2I	GAAGAC	2 cut(s)	969, 1679
BstX2I	RGATCY	1 cut(s)	940
BstXI	CCANNNNNNTGG	2 cut(s)	883, 1454
BstYI	RGATCY	1 cut(s)	940
BstZ17I	GTATAC	1 cut(s)	1639
BsuI	GTATCC	3 cut(s)	1520, 1573, 1865
BsuRI	GGCC	5 cut(s)	166, 636, 875, 1334, 1458
BtgI	CCRYGG	1 cut(s)	665
BtgZI	GCGATG	1 cut(s)	1212
BtsCI	GGATG	6 cut(s)	1123, 1305, 1309, 1495, 1534, 1948
BtsI	GCAGTG	1 cut(s)	934
BtsIMutI	CAGTG	3 cut(s)	657, 934, 1018
BveI	ACCTGC	1 cut(s)	1844
Cac8I	GCNNGC	1 cut(s)	1167
CaiI	CAGNNNCTG	1 cut(s)	1004
CfoI	GCGC	3 cut(s)	735, 1183, 1295
Cfr10I	RCCGGY	1 cut(s)	1183
Cfr13I	GGNCC	4 cut(s)	634, 662, 1333, 1677
CseI	GACGC	1 cut(s)	542
CspCI	CAANNNNNGTGG	2 cut(s)	156, 191
DpnI	GATC	7 cut(s)	201, 227, 942, 1260, 1716, 1773, 1802
DpnII	GATC	7 cut(s)	199, 225, 940, 1258, 1714, 1771, 1800
EaeI	YGGCCR	3 cut(s)	164, 873, 1456
Eam1104I	CTCTTC	3 cut(s)	775, 1470, 1629
EarI	CTCTTC	3 cut(s)	775, 1470, 1629
EciI	GGCGGA	1 cut(s)	1907
Ecl136II	GAGCTC	1 cut(s)	728
Eco130I	CCWWGG	3 cut(s)	630, 665, 988
Eco24I	GRGCYC	1 cut(s)	730
Eco31I	GGTCTC	1 cut(s)	1748
Eco47I	GGWCC	2 cut(s)	662, 1677
Eco53kI	GAGCTC	1 cut(s)	728
Eco57I	CTGAAG	5 cut(s)	30, 1260, 1451, 1822, 1836
Eco88I	CYCGRG	1 cut(s)	1628
EcoICRI	GAGCTC	1 cut(s)	728
EcoO109I	RGGNCCY	1 cut(s)	1677
EcoRI	GAATTC	1 cut(s)	376
EcoRII	CCWGG	2 cut(s)	91, 1741
EcoT14I	CCWWGG	3 cut(s)	630, 665, 988
EcoT22I	ATGCAT	1 cut(s)	346
EcoT38I	GRGCYC	1 cut(s)	730
ErhI	CCWWGG	3 cut(s)	630, 665, 988
Esp3I	CGTCTC	1 cut(s)	1281
FaqI	GGGAC	3 cut(s)	333, 1037, 1663
FauNDI	CATATG	1 cut(s)	1473
FbaI	TGATCA	2 cut(s)	225, 1771
FblI	GTMKAC	2 cut(s)	744, 1638
FokI	GGATG	6 cut(s)	1130, 1312, 1316, 1502, 1541, 1955
FriOI	GRGCYC	1 cut(s)	730
FspBI	CTAG	6 cut(s)	140, 173, 690, 914, 1133, 1499
GlaI	GCGC	3 cut(s)	734, 1182, 1294
GsaI	CCCAGC	1 cut(s)	1938
GsuI	CTGGAG	3 cut(s)	351, 1057, 1739
HaeII	RGCGCY	2 cut(s)	1184, 1296
HaeIII	GGCC	5 cut(s)	166, 636, 875, 1334, 1458
HapII	CCGG	4 cut(s)	290, 944, 1184, 1513
HgaI	GACGC	1 cut(s)	542
HhaI	GCGC	3 cut(s)	735, 1183, 1295
Hin6I	GCGC	3 cut(s)	733, 1181, 1293
HinP1I	GCGC	3 cut(s)	733, 1181, 1293
HincII	GTYRAC	1 cut(s)	398
HindII	GTYRAC	1 cut(s)	398
HindIII	AAGCTT	3 cut(s)	815, 836, 920
HpaII	CCGG	4 cut(s)	290, 944, 1184, 1513
HphI	GGTGA	4 cut(s)	71, 310, 788, 1412
Hpy166II	GTNNAC	3 cut(s)	398, 745, 1639
Hpy188I	TCNGA	8 cut(s)	10, 89, 435, 520, 1279, 1982, 2042, 2075
Hpy8I	GTNNAC	3 cut(s)	398, 745, 1639
HpyAV	CCTTC	5 cut(s)	168, 289, 1284, 1333, 2064
HpyF10VI	GCNNNNNNNGC	6 cut(s)	163, 350, 620, 1001, 1919, 2099
HspAI	GCGC	3 cut(s)	733, 1181, 1293
KflI	GGGWCCC	1 cut(s)	1677
Kpn2I	TCCGGA	1 cut(s)	1512
Ksp22I	TGATCA	2 cut(s)	225, 1771
Kzo9I	GATC	7 cut(s)	199, 225, 940, 1258, 1714, 1771, 1800
LguI	GCTCTTC	1 cut(s)	1470
LmnI	GCTCC	5 cut(s)	133, 178, 691, 1720, 2020
LweI	GCATC	6 cut(s)	64, 673, 1108, 1519, 1900, 1921
MaeI	CTAG	6 cut(s)	140, 173, 690, 914, 1133, 1499
MaeIII	GTNAC	4 cut(s)	845, 1400, 1545, 1880
MalI	GATC	7 cut(s)	201, 227, 942, 1260, 1716, 1773, 1802
MboI	GATC	7 cut(s)	199, 225, 940, 1258, 1714, 1771, 1800
MflI	RGATCY	1 cut(s)	940
MhlI	GDGCHC	2 cut(s)	106, 730
MlsI	TGGCCA	3 cut(s)	166, 875, 1458
MluNI	TGGCCA	3 cut(s)	166, 875, 1458
MlyI	GAGTC	5 cut(s)	59, 1009, 1335, 1350, 2079
MmeI	TCCRAC	2 cut(s)	1262, 1920
Mox20I	TGGCCA	3 cut(s)	166, 875, 1458
Mph1103I	ATGCAT	1 cut(s)	346
MroI	TCCGGA	1 cut(s)	1512
MroXI	GAANNNNTTC	3 cut(s)	282, 921, 1623
MscI	TGGCCA	3 cut(s)	166, 875, 1458
MseI	TTAA	7 cut(s)	237, 348, 474, 969, 1071, 1586, 1950
MslI	CAYNNNNRTG	1 cut(s)	881
Msp20I	TGGCCA	3 cut(s)	166, 875, 1458
MspA1I	CMGCKG	2 cut(s)	623, 1868
MspCI	CTTAAG	2 cut(s)	236, 968
MspI	CCGG	4 cut(s)	290, 944, 1184, 1513
MspR9I	CCNGG	2 cut(s)	93, 1743
MvaI	CCWGG	2 cut(s)	93, 1743
MvnI	CGCG	1 cut(s)	735
MwoI	GCNNNNNNNGC	6 cut(s)	163, 350, 620, 1001, 1919, 2099
NcoI	CCATGG	1 cut(s)	665
NdeI	CATATG	1 cut(s)	1473
NdeII	GATC	7 cut(s)	199, 225, 940, 1258, 1714, 1771, 1800
NlaIV	GGNNCC	5 cut(s)	180, 942, 1345, 1678, 1679
NmeAIII	GCCGAG	1 cut(s)	1349
NmuCI	GTSAC	2 cut(s)	1400, 1545
NsiI	ATGCAT	1 cut(s)	346
NspI	RCATGY	2 cut(s)	716, 1741
PaqCI	CACCTGC	1 cut(s)	1844
PciSI	GCTCTTC	1 cut(s)	1470
PdmI	GAANNNNTTC	3 cut(s)	282, 921, 1623
PfeI	GAWTC	7 cut(s)	28, 97, 362, 1055, 1223, 1824, 1977
PflMI	CCANNNNNTGG	1 cut(s)	1397
PleI	GAGTC	5 cut(s)	59, 1009, 1334, 1350, 2079
PpsI	GAGTC	5 cut(s)	59, 1009, 1334, 1350, 2079
PpuMI	RGGWCCY	1 cut(s)	1677
PshBI	ATTAAT	1 cut(s)	1071
Psp124BI	GAGCTC	1 cut(s)	730
Psp5II	RGGWCCY	1 cut(s)	1677
Psp6I	CCWGG	2 cut(s)	91, 1741
PspFI	CCCAGC	1 cut(s)	1934
PspGI	CCWGG	2 cut(s)	91, 1741
PspN4I	GGNNCC	5 cut(s)	180, 942, 1345, 1678, 1679
PspPI	GGNCC	4 cut(s)	634, 662, 1333, 1677
PspPPI	RGGWCCY	1 cut(s)	1677
PsrI	GAACNNNNNNTAC	2 cut(s)	1553, 1585
PstI	CTGCAG	2 cut(s)	1000, 1909
PstNI	CAGNNNCTG	1 cut(s)	1004
PsuI	RGATCY	1 cut(s)	940
PvuII	CAGCTG	2 cut(s)	623, 1868
RseI	CAYNNNNRTG	1 cut(s)	881
SacI	GAGCTC	1 cut(s)	730
SapI	GCTCTTC	1 cut(s)	1470
SaqAI	TTAA	7 cut(s)	237, 348, 474, 969, 1071, 1586, 1950
Sau3AI	GATC	7 cut(s)	199, 225, 940, 1258, 1714, 1771, 1800
Sau96I	GGNCC	4 cut(s)	634, 662, 1333, 1677
SchI	GAGTC	5 cut(s)	59, 1009, 1335, 1350, 2079
ScrFI	CCNGG	2 cut(s)	93, 1743
SduI	GDGCHC	2 cut(s)	106, 730
SfaNI	GCATC	6 cut(s)	64, 673, 1108, 1519, 1900, 1921
SfcI	CTRYAG	6 cut(s)	150, 996, 1707, 1831, 1876, 1905
SinI	GGWCC	2 cut(s)	662, 1677
SmiMI	CAYNNNNRTG	1 cut(s)	881
SmlI	CTYRAG	2 cut(s)	236, 968
SmoI	CTYRAG	2 cut(s)	236, 968
SpeI	ACTAGT	1 cut(s)	172
SsiI	CCGC	2 cut(s)	428, 1892
SspMI	CTAG	6 cut(s)	140, 173, 690, 914, 1133, 1499
SstI	GAGCTC	1 cut(s)	730
StyD4I	CCNGG	2 cut(s)	91, 1741
StyI	CCWWGG	3 cut(s)	630, 665, 988
TaqI	TCGA	7 cut(s)	26, 120, 358, 681, 801, 820, 1521
TaqII	GACCGA	1 cut(s)	1118
TfiI	GAWTC	7 cut(s)	28, 97, 362, 1055, 1223, 1824, 1977
Tru1I	TTAA	7 cut(s)	237, 348, 474, 969, 1071, 1586, 1950
Tru9I	TTAA	7 cut(s)	237, 348, 474, 969, 1071, 1586, 1950
TscAI	CASTG	3 cut(s)	664, 934, 1025
TseFI	GTSAC	2 cut(s)	1400, 1545
Tsp45I	GTSAC	2 cut(s)	1400, 1545
TspDTI	ATGAA	6 cut(s)	150, 369, 654, 924, 1320, 1464
TspGWI	ACGGA	5 cut(s)	48, 58, 1339, 1415, 1658
TspRI	CASTG	3 cut(s)	664, 934, 1025
Van91I	CCANNNNNTGG	1 cut(s)	1397
Vha464I	CTTAAG	2 cut(s)	236, 968
VpaK11BI	GGWCC	2 cut(s)	662, 1677
VspI	ATTAAT	1 cut(s)	1071
XapI	RAATTY	4 cut(s)	43, 376, 470, 1451
XceI	RCATGY	2 cut(s)	716, 1741
XcmI	CCANNNNNNNNNTGG	1 cut(s)	89
XmiI	GTMKAC	2 cut(s)	744, 1638
XmnI	GAANNNNTTC	3 cut(s)	282, 921, 1623
XspI	CTAG	6 cut(s)	140, 173, 690, 914, 1133, 1499
Zsp2I	ATGCAT	1 cut(s)	346

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.