Rmu_sc0024311.1_g000001

Oligopeptidase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0024311.1
Physical Location & Seq
Forward (+)
1 .. 7017
7017 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0024311.1_g000001.1.cds

Sequence Viewer

Length: 1782 bp
ccactccaggtgagttttgatatgaaaatgactcaaagcaaagcaatttataaggccttcaaatctattcgagaatctcatgattgggagacaatgagtgatgcacggaaacgaatagttgaatggcatatcaaggagtcggacctggccggtatcaatcttgatgatgctaagagacagtatcttagagatattgaactgaaactagaagatcaatataaaaaatttgaggagaatgtgctagacgccacagaagcgactcaaatgctagttaccgaagtaggcaatgttttgggattggatattggtctacttcaggcggctgcggaacgagcaatattgaagggacatgaagatgcaacatctgaaaaggggccttggctattcactctcgaagattatgagcaaattatgacatatgctgaaaaccggtcttttcgtgaagaggtttacttagctcctgtaacttgtgtctcaaccggagatttaaataacactcctgtcatcgagtcaattttgtcgctcagattgcagaaggctaagcttctgggttataataactatgccgaggtaagcatgaaaacaaagtgtgctaccattgaaaaagcgaaaaatctgctagaagaactccaaaataagctttggaaagctggacttgaagagattgaagaacttaagcatattgctagagaacagaaagctgaagaagctgaggacttcaggccttgggacaccgccttttggacagaactgctacttgaaaccaaagttccaggctatcaggagggcacaaaccgttacttcatctattccgatgtcatggatgcactattctacctagcatctgtgatgttcgacattcatattgcacctgctgatggcacagctccggtttggcacaaggatgtgaaattatattctgtctcagattctcacaccactgttggatacgtatatttcgatccattttctcgccctgagaaaatgggaggggcagcgacgggtggattcttttccagaactgtagattatgacatgagttctagaaggttgcctatggcatacatttactgtaatataagtcggccatcaaaggggagcaatcggatttttatgtcttttgatgaggtgcgaactcttttccatgaatttggacatgcatttcagcatgtactgacaaagcaagatgaagtactagtggctggttttcagaagatagagcaagattgtgttgaggtaccctccacattcatggaaaaatggtgttaccacggggacactttaagaagaattgcaggagttcaaccgaagagaaaagggaaaaaagggagaagaggtggaaacttgcagcctcttaaagataaaactccaattttggatactcttgatgagataaggacggcaattgttgatttagagctgcatacaagttatacaccttctgggtcagagtctattcatgatgtttatcttcgaccacgaagtgtgattcctatacatcctggggacaagtcaatttgtacctggatccatatatttggaggtggatatgaagctgggatgtatggctataagtggtctgagatgttttcgaccgatgctttctcagtatttgaagatgccggactggacaatgaaaaggttctcataacaaaagggtgcgagttccgagattctgttcttgctgttggaggtgggaaagcacccgaaaagatttttgaggatttcctgggacgtcaacctacattggatgcacttgtcaagcacaagcttagtttgtag

Protein Analysis

593

Amino Acids

67.53

Weight (kDa)

5.48

Isoelectric Point (pI)

51.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 51, 555
AarI CACCTGC 1 cut(s) 880
AatII GACGTC 1 cut(s) 1738
Acc36I ACCTGC 1 cut(s) 880
Acc65I GGTACC 1 cut(s) 1237
AccB1I GGYRCC 1 cut(s) 1237
AccI GTMKAC 1 cut(s) 310
AciI CCGC 3 cut(s) 320, 326, 735
AclWI GGATC 3 cut(s) 956, 1522, 1535
AcoI YGGCCR 2 cut(s) 147, 1085
AcsI RAATTY 2 cut(s) 224, 1148
AcuI CTGAAG 3 cut(s) 299, 703, 723
AcyI GRCGYC 2 cut(s) 246, 1735
AdeI CACNNNGTG 1 cut(s) 1484
AfaI GTAC 4 cut(s) 1173, 1194, 1239, 1522
AfiI CCNNNNNNNGG 3 cut(s) 741, 878, 1094
AflII CTTAAG 1 cut(s) 674
AgeI ACCGGT 1 cut(s) 429
AhlI ACTAGT 1 cut(s) 1195
AjnI CCWGG 6 cut(s) 6, 144, 772, 1501, 1523, 1728
Alw26I GTCTC 4 cut(s) 83, 169, 478, 928
AlwI GGATC 3 cut(s) 956, 1522, 1535
AoxI GGCC 5 cut(s) 54, 147, 374, 722, 1085
ApeKI GCWGC 4 cut(s) 323, 995, 1348, 1420
ApoI RAATTY 2 cut(s) 224, 1148
AsiGI ACCGGT 1 cut(s) 429
Asp700I GAANNNNTTC 1 cut(s) 1641
Asp718I GGTACC 1 cut(s) 1237
AspS9I GGNCC 2 cut(s) 142, 374
AsuHPI GGTGA 1 cut(s) 22
AvaII GGWCC 1 cut(s) 142
BaeGI GKGCMC 1 cut(s) 791
BamHI GGATCC 1 cut(s) 1527
BanI GGYRCC 1 cut(s) 1237
BbvCI CCTCAGC 1 cut(s) 711
BbvI GCAGC 4 cut(s) 310, 1007, 1360, 1407
BccI CCATC 2 cut(s) 872, 1096
BceAI ACGGC 1 cut(s) 1416
BcgI CGANNNNNNTGC 4 cut(s) 247, 281, 598, 632
BciT130I CCWGG 6 cut(s) 8, 146, 774, 1503, 1525, 1730
BciVI GTATCC 2 cut(s) 941, 1372
BcoDI GTCTC 4 cut(s) 83, 169, 478, 928
BcuI ACTAGT 1 cut(s) 1195
BfaI CTAG 8 cut(s) 206, 242, 269, 620, 687, 839, 1044, 1196
BfmI CTRYAG 1 cut(s) 1023
BfrI CTTAAG 1 cut(s) 674
BfuAI ACCTGC 1 cut(s) 880
BfuI GTATCC 2 cut(s) 941, 1372
BisI GCNGC 5 cut(s) 321, 324, 996, 1349, 1421
BlpI GCTNAGC 1 cut(s) 540
BlsI GCNGC 5 cut(s) 322, 325, 997, 1350, 1422
BmcAI AGTACT 1 cut(s) 1194
Bme1390I CCNGG 6 cut(s) 8, 146, 774, 1503, 1525, 1730
Bme18I GGWCC 1 cut(s) 142
BmgT120I GGNCC 2 cut(s) 142, 374
BmiI GGNNCC 3 cut(s) 375, 1239, 1529
BmrFI CCNGG 6 cut(s) 8, 146, 774, 1503, 1525, 1730
BmsI GCATC 8 cut(s) 91, 157, 346, 814, 851, 1588, 1609, 1741
BplI GAGNNNNNCTC 2 cut(s) 1226, 1258
Bpu10I CCTNAGC 1 cut(s) 711
Bpu1102I GCTNAGC 1 cut(s) 540
BsaAI YACGTR 1 cut(s) 952
BsaBI GATNNNNATC 1 cut(s) 1467
BsaHI GRCGYC 2 cut(s) 246, 1735
BsaJI CCNNGG 6 cut(s) 377, 567, 725, 1270, 1502, 1729
BsaWI WCCGGW 3 cut(s) 429, 479, 889
BsaXI ACNNNNNCTCC 2 cut(s) 1321, 1351
Bsc4I CCNNNNNNNGG 3 cut(s) 741, 878, 1094
Bse118I RCCGGY 2 cut(s) 149, 429
Bse1I ACTGG 1 cut(s) 1632
Bse3DI GCAATG 1 cut(s) 292
Bse8I GATNNNNATC 1 cut(s) 1467
BseBI CCWGG 6 cut(s) 8, 146, 774, 1503, 1525, 1730
BseDI CCNNGG 6 cut(s) 377, 567, 725, 1270, 1502, 1729
BseGI GGATG 5 cut(s) 829, 910, 1498, 1566, 1756
BseJI GATNNNNATC 1 cut(s) 1467
BseLI CCNNNNNNNGG 3 cut(s) 741, 878, 1094
BseMI GCAATG 1 cut(s) 292
BseMII CTCAG 6 cut(s) 538, 702, 939, 969, 1572, 1620
BseNI ACTGG 1 cut(s) 1632
BseRI GAGGAG 1 cut(s) 245
BseSI GKGCMC 1 cut(s) 791
BseXI GCAGC 4 cut(s) 310, 1007, 1360, 1407
BseYI CCCAGC 1 cut(s) 1556
Bsh1285I CGRYCG 1 cut(s) 1596
BshFI GGCC 5 cut(s) 56, 149, 376, 724, 1087
BshNI GGYRCC 1 cut(s) 1237
BshTI ACCGGT 1 cut(s) 429
BsiEI CGRYCG 1 cut(s) 1596
BsiSI CCGG 5 cut(s) 150, 430, 480, 890, 1623
BslFI GGGAC 5 cut(s) 360, 743, 1289, 1520, 1746
BslI CCNNNNNNNGG 3 cut(s) 741, 878, 1094
BsmAI GTCTC 4 cut(s) 83, 169, 478, 928
BsmFI GGGAC 5 cut(s) 360, 743, 1289, 1520, 1746
BsnI GGCC 5 cut(s) 56, 149, 376, 724, 1087
Bsp1286I GDGCHC 1 cut(s) 791
Bsp143I GATC 3 cut(s) 211, 961, 1527
Bsp1720I GCTNAGC 1 cut(s) 540
BspACI CCGC 3 cut(s) 320, 326, 735
BspANI GGCC 5 cut(s) 56, 149, 376, 724, 1087
BspCNI CTCAG 6 cut(s) 537, 703, 938, 970, 1573, 1619
BspHI TCATGA 2 cut(s) 79, 1459
BspLI GGNNCC 3 cut(s) 375, 1239, 1529
BspMI ACCTGC 1 cut(s) 880
BspPI GGATC 3 cut(s) 956, 1522, 1535
BspT107I GGYRCC 1 cut(s) 1237
BspTI CTTAAG 1 cut(s) 674
BsrDI GCAATG 1 cut(s) 292
BsrFI RCCGGY 2 cut(s) 149, 429
BsrI ACTGG 1 cut(s) 1632
BssAI RCCGGY 2 cut(s) 149, 429
BssECI CCNNGG 6 cut(s) 377, 567, 725, 1270, 1502, 1729
BssMI GATC 3 cut(s) 211, 961, 1527
BssNI GRCGYC 2 cut(s) 246, 1735
BssT1I CCWWGG 2 cut(s) 377, 725
Bst2UI CCWGG 6 cut(s) 8, 146, 774, 1503, 1525, 1730
Bst4CI ACNGT 5 cut(s) 180, 797, 943, 1024, 1073
Bst6I CTCTTC 4 cut(s) 438, 654, 1304, 1327
BstACI GRCGYC 2 cut(s) 246, 1735
BstAFI CTTAAG 1 cut(s) 674
BstBAI YACGTR 1 cut(s) 952
BstDSI CCRYGG 1 cut(s) 1270
BstF5I GGATG 5 cut(s) 829, 910, 1498, 1566, 1756
BstKTI GATC 3 cut(s) 214, 964, 1530
BstMAI GTCTC 4 cut(s) 83, 169, 478, 928
BstMBI GATC 3 cut(s) 211, 961, 1527
BstMCI CGRYCG 1 cut(s) 1596
BstMWI GCNNNNNNNGC 4 cut(s) 254, 332, 529, 707
BstNI CCWGG 6 cut(s) 8, 146, 774, 1503, 1525, 1730
BstNSI RCATGY 2 cut(s) 1160, 1172
BstSCI CCNGG 6 cut(s) 6, 144, 772, 1501, 1523, 1728
BstSFI CTRYAG 1 cut(s) 1023
BstSLI GKGCMC 1 cut(s) 791
BstSNI TACGTA 1 cut(s) 952
BstV1I GCAGC 4 cut(s) 310, 1007, 1360, 1407
BstX2I RGATCY 1 cut(s) 1527
BstXI CCANNNNNNTGG 3 cut(s) 1151, 1252, 1538
BstYI RGATCY 1 cut(s) 1527
BsuI GTATCC 2 cut(s) 941, 1372
BsuRI GGCC 5 cut(s) 56, 149, 376, 724, 1087
BtgI CCRYGG 1 cut(s) 1270
BtsCI GGATG 5 cut(s) 829, 910, 1498, 1566, 1756
BtsIMutI CAGTG 1 cut(s) 939
BveI ACCTGC 1 cut(s) 880
CciI TCATGA 2 cut(s) 79, 1459
Cfr10I RCCGGY 2 cut(s) 149, 429
Cfr13I GGNCC 2 cut(s) 142, 374
CseI GACGC 1 cut(s) 254
Csp6I GTAC 4 cut(s) 1172, 1193, 1238, 1521
CspAI ACCGGT 1 cut(s) 429
CviQI GTAC 4 cut(s) 1172, 1193, 1238, 1521
DpnI GATC 3 cut(s) 213, 963, 1529
DpnII GATC 3 cut(s) 211, 961, 1527
DraI TTTAAA 1 cut(s) 489
DraIII CACNNNGTG 1 cut(s) 1484
EaeI YGGCCR 2 cut(s) 147, 1085
Eam1104I CTCTTC 4 cut(s) 438, 654, 1304, 1327
EarI CTCTTC 4 cut(s) 438, 654, 1304, 1327
Eco105I TACGTA 1 cut(s) 952
Eco130I CCWWGG 2 cut(s) 377, 725
Eco147I AGGCCT 2 cut(s) 56, 724
Eco47I GGWCC 1 cut(s) 142
Eco57I CTGAAG 3 cut(s) 299, 703, 723
EcoO109I RGGNCCY 1 cut(s) 374
EcoRII CCWGG 6 cut(s) 6, 144, 772, 1501, 1523, 1728
EcoT14I CCWWGG 2 cut(s) 377, 725
EcoT22I ATGCAT 1 cut(s) 1162
ErhI CCWWGG 2 cut(s) 377, 725
FalI AAGNNNNNCTT 2 cut(s) 639, 671
FaqI GGGAC 5 cut(s) 360, 743, 1289, 1520, 1746
FauNDI CATATG 1 cut(s) 418
FblI GTMKAC 1 cut(s) 310
Fnu4HI GCNGC 5 cut(s) 321, 324, 996, 1349, 1421
FokI GGATG 5 cut(s) 836, 917, 1485, 1573, 1763
Fsp4HI GCNGC 5 cut(s) 321, 324, 996, 1349, 1421
FspBI CTAG 8 cut(s) 206, 242, 269, 620, 687, 839, 1044, 1196
GluI GCNGC 5 cut(s) 321, 324, 996, 1349, 1421
GsaI CCCAGC 1 cut(s) 1560
HaeIII GGCC 5 cut(s) 56, 149, 376, 724, 1087
HapII CCGG 5 cut(s) 150, 430, 480, 890, 1623
HgaI GACGC 1 cut(s) 254
Hin1I GRCGYC 2 cut(s) 246, 1735
HincII GTYRAC 1 cut(s) 1739
HindII GTYRAC 1 cut(s) 1739
HindIII AAGCTT 3 cut(s) 542, 638, 1769
HpaII CCGG 5 cut(s) 150, 430, 480, 890, 1623
HphI GGTGA 1 cut(s) 22
Hpy166II GTNNAC 3 cut(s) 311, 451, 1739
Hpy8I GTNNAC 3 cut(s) 311, 451, 1739
Hpy99I CGWCG 1 cut(s) 1003
HpyAV CCTTC 5 cut(s) 67, 337, 529, 1041, 1449
HpyCH4III ACNGT 5 cut(s) 180, 797, 943, 1024, 1073
HpyCH4IV ACGT 2 cut(s) 951, 1735
HpyF10VI GCNNNNNNNGC 4 cut(s) 254, 332, 529, 707
HpySE526I ACGT 2 cut(s) 951, 1735
Hsp92I GRCGYC 2 cut(s) 246, 1735
KpnI GGTACC 1 cut(s) 1241
Kzo9I GATC 3 cut(s) 211, 961, 1527
LmnI GCTCC 3 cut(s) 463, 892, 1098
Lsp1109I GCAGC 4 cut(s) 310, 1007, 1360, 1407
LweI GCATC 8 cut(s) 91, 157, 346, 814, 851, 1588, 1609, 1741
MaeI CTAG 8 cut(s) 206, 242, 269, 620, 687, 839, 1044, 1196
MaeII ACGT 2 cut(s) 951, 1735
MaeIII GTNAC 4 cut(s) 271, 463, 797, 1265
MalI GATC 3 cut(s) 213, 963, 1529
MboI GATC 3 cut(s) 211, 961, 1527
MfeI CAATTG 1 cut(s) 1404
MflI RGATCY 1 cut(s) 1527
MhlI GDGCHC 1 cut(s) 791
MlyI GAGTC 5 cut(s) 25, 146, 253, 518, 1460
MmeI TCCRAC 3 cut(s) 120, 925, 1669
Mph1103I ATGCAT 1 cut(s) 1162
MroXI GAANNNNTTC 1 cut(s) 1641
MseI TTAA 4 cut(s) 488, 675, 1283, 1356
MslI CAYNNNNRTG 3 cut(s) 354, 903, 1250
MspCI CTTAAG 1 cut(s) 674
MspI CCGG 5 cut(s) 150, 430, 480, 890, 1623
MspR9I CCNGG 6 cut(s) 8, 146, 774, 1503, 1525, 1730
MunI CAATTG 1 cut(s) 1404
MvaI CCWGG 6 cut(s) 8, 146, 774, 1503, 1525, 1730
MwoI GCNNNNNNNGC 4 cut(s) 254, 332, 529, 707
NdeI CATATG 1 cut(s) 418
NdeII GATC 3 cut(s) 211, 961, 1527
NlaIV GGNNCC 3 cut(s) 375, 1239, 1529
NmeAIII GCCGAG 1 cut(s) 592
NsiI ATGCAT 1 cut(s) 1162
NspI RCATGY 2 cut(s) 1160, 1172
PagI TCATGA 2 cut(s) 79, 1459
PaqCI CACCTGC 1 cut(s) 880
PceI AGGCCT 2 cut(s) 56, 724
PcsI WCGNNNNNNNCGW 1 cut(s) 957
PdmI GAANNNNTTC 1 cut(s) 1641
PfeI GAWTC 5 cut(s) 74, 929, 1008, 1489, 1673
PinAI ACCGGT 1 cut(s) 429
PkrI GCNGC 5 cut(s) 322, 325, 997, 1350, 1422
PleI GAGTC 5 cut(s) 25, 145, 253, 517, 1459
PpsI GAGTC 5 cut(s) 25, 145, 253, 517, 1459
Ppu21I YACGTR 1 cut(s) 952
PsiI TTATAA 2 cut(s) 51, 555
Psp6I CCWGG 6 cut(s) 6, 144, 772, 1501, 1523, 1728
PspFI CCCAGC 1 cut(s) 1556
PspGI CCWGG 6 cut(s) 6, 144, 772, 1501, 1523, 1728
PspN4I GGNNCC 3 cut(s) 375, 1239, 1529
PspPI GGNCC 2 cut(s) 142, 374
PsuI RGATCY 1 cut(s) 1527
RsaI GTAC 4 cut(s) 1173, 1194, 1239, 1522
RsaNI GTAC 4 cut(s) 1172, 1193, 1238, 1521
RseI CAYNNNNRTG 3 cut(s) 354, 903, 1250
SaqAI TTAA 4 cut(s) 488, 675, 1283, 1356
SatI GCNGC 5 cut(s) 321, 324, 996, 1349, 1421
Sau3AI GATC 3 cut(s) 211, 961, 1527
Sau96I GGNCC 2 cut(s) 142, 374
ScaI AGTACT 1 cut(s) 1194
SchI GAGTC 5 cut(s) 25, 146, 253, 518, 1460
ScrFI CCNGG 6 cut(s) 8, 146, 774, 1503, 1525, 1730
SduI GDGCHC 1 cut(s) 791
SfaNI GCATC 8 cut(s) 91, 157, 346, 814, 851, 1588, 1609, 1741
SfcI CTRYAG 1 cut(s) 1023
SinI GGWCC 1 cut(s) 142
SmiI ATTTAAAT 1 cut(s) 489
SmiMI CAYNNNNRTG 3 cut(s) 354, 903, 1250
SmlI CTYRAG 1 cut(s) 674
SmoI CTYRAG 1 cut(s) 674
SnaBI TACGTA 1 cut(s) 952
SpeI ACTAGT 1 cut(s) 1195
SseBI AGGCCT 2 cut(s) 56, 724
SsiI CCGC 3 cut(s) 320, 326, 735
SspI AATATT 1 cut(s) 339
SspMI CTAG 8 cut(s) 206, 242, 269, 620, 687, 839, 1044, 1196
StuI AGGCCT 2 cut(s) 56, 724
StyD4I CCNGG 6 cut(s) 6, 144, 772, 1501, 1523, 1728
StyI CCWWGG 2 cut(s) 377, 725
SwaI ATTTAAAT 1 cut(s) 489
TaaI ACNGT 5 cut(s) 180, 797, 943, 1024, 1073
TaiI ACGT 2 cut(s) 954, 1738
TaqI TCGA 7 cut(s) 70, 393, 507, 855, 960, 1474, 1592
TaqII GACCGA 1 cut(s) 1610
TatI WGTACW 2 cut(s) 1171, 1192
TauI GCSGC 1 cut(s) 323
TfiI GAWTC 5 cut(s) 74, 929, 1008, 1489, 1673
Tru1I TTAA 4 cut(s) 488, 675, 1283, 1356
Tru9I TTAA 4 cut(s) 488, 675, 1283, 1356
TscAI CASTG 1 cut(s) 946
TseI GCWGC 4 cut(s) 323, 995, 1348, 1420
TspGWI ACGGA 1 cut(s) 121
TspRI CASTG 1 cut(s) 946
Vha464I CTTAAG 1 cut(s) 674
VpaK11BI GGWCC 1 cut(s) 142
XapI RAATTY 2 cut(s) 224, 1148
XbaI TCTAGA 1 cut(s) 1043
XceI RCATGY 2 cut(s) 1160, 1172
XmiI GTMKAC 1 cut(s) 310
XmnI GAANNNNTTC 1 cut(s) 1641
XspI CTAG 8 cut(s) 206, 242, 269, 620, 687, 839, 1044, 1196
ZraI GACGTC 1 cut(s) 1736
ZrmI AGTACT 1 cut(s) 1194
Zsp2I ATGCAT 1 cut(s) 1162
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.