Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0004392

Physical Location & Seq

Genomic Coordinates Reverse (-)

11280111 .. 11287343

Gene Structure 7233 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g19050.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2406 bp

ATGAGGCCTAATCCTCCCTTGGCCTTAGCCTTGCAAATTCCAAAGAGAGCCCTCTTGGCTTCTCTTCTTATATTCAACATGCTCATGGCAACTCGCGTCACTCTCTCCCGCTCAGTCTCTCCTCTCCTGAAGCGAGCTCCTCACCATCCCCATTTTGCCCCTAGACCATTACCCAAATCCTTTCCCTGTCCCCTCTGGTCTTCCTCCTTCTCCTCCTGCCTCCTCTCTCTCCCTAAACCCACCGCCACATCCCGACGGCGACGACGACCTCGCTGTTCCTTCTCAATGGCCGCCTCTGCTGCCGTCGACCAAGCTCTCTCCTCCAATCCTCTCCTCCAGGACTTCGACTTCCCTCCCTTCGATGCCGTTGATGCCTCGCACGTCCGGCCTGCGATTCGAGCTCTGCTCAAGAAGCTCGAGTCTGATTTGGAGGAGTTAGAGCGCACGGTGGAGCCTAGCTGGCCGAAGCTGGTGGTGCCATTCGAGAAGATCGTTGACCGGTTGAGTGTGGTTTGGGGAATAGTCAACCACCTCAAGGCTGTTAAGGACTCGTCGGAGCTTCGTGCTGCTATAGAAGAAGTGCAACCAGAGAAAGTGAAGTTTTACCTTCGGTTGGGGCAAAGCAAGCCGATTTACAATGCATTTAAAGCTATTCAAGAATCTCCTGACTGGAAGACATTGAGTGATGCTCAGAAACGTATAGTTGAAAGCCAAATAAAGGAGGCAGTACTAAGTGGAGTTGCCCTTGAGGATGATAAAAGAGAAAGTTTTAACAAAATTGAACAGGAACTAGAAAGACTATCTCAAAAATTTGGGGAGAATGTTCTGGATGCCACAAAAAAATTTGAAAAGTTAATCACAGATAAGAAAGAAATTGATGGATTGCCAGCTACTGCTCTAGGATTGGCTGCACAAACAGCAGTGTCAAAGGGGCATGAAAATGCGACTGCTGAAAATGGGCCTTGGCTATTCACATTAGATGGCCCAAGTTTTCTCTCTGTTATGCAACATGCTCGAAACCGGTCTTTACGTGAGGAAATATACCGTGCTTACGTAACTCGCGCCTCTAGTGGGGAGCTGGATAATACTGCTATTATTGACTCAATCTTGAAGCTTAGGTTGGAAAAGGCTAAGCTTCTGAACTACAACAACTATGCTGAGGTAAGCATGGCAACCAAAATGGCCACTGTTGAAAAAGCAGAAGAGCTTCTAGAGAAACTTCGAAGTGCTTCTTGGAATGCTGGAGTTCAAGATATGGACGACCTTCAGAATTTCTCCAAAAGCCAAGATGCTCCAGAAGCCAATGATTTGAACCACTGGGACATTAGCTTTTGGAGTGAGAGACTTCGGGAGTCCAAATTTGATATCAACGAGGAAGAACTGCGCCCCTATTTCTCCTTGCCAAAGGTTATGGATGGCCTATTTAGCCTAGCGAATAAGATTTTTGGAATTGACATTGAACCGGCCGACGGTTTAGCTCCGGTTTGGAACAATGATGTTAAATTCTATCATGTCAAAGATTCTTCTGGGGATCCTATTGCATATTTTTACTTCGATCCCTATACTCGTCCGTCTGAGAAAAGGGGAGGTGCATGGATGGATGAAGTTTTTGCTAGAAGCCGTGTATTGTCACGTGATGGTACCTCTCCAAGGTTGCCTGTGGCACACATGGTATGCAATCAATCACCACCAGTGGGAGACAAACCCAGCTTGATGACCTTCCGAGAGGTTGAGACTGTCTTCCATGAATTTGGTCATGCACTTCAGCATATGCTGACAAAGCAAGATGAGGGTCTTGTTGCTGGTATCCGAGGTGTAGAATGGGATGCTGTTGAATTGCCCTCACAGTTCATGGAAAATTGGTGTTACCATAGAGACACTTTAATGAGCATTGCTAAGCATTATGAAACTGGGGAAACTCTTCCAGAAGAAGTATTCTTGAAGCTTCTTGCAGCAAGGACTTTCCGTGCTGGCTCCCTAAGCCTTCGACAGATAAGATTTGCAATTGTAGATCTGAAGCTGCATACGGAGTATATACCTGGTGGATCAGAATCAATTTATGATGTTGATCAGAGGGTTAGTGAAAAAACACAAGTGATCCCTCCACTTCCAGAAGATAGGTTCCTTTGTGGTTTCAGCCATATCTTTGCAGGTGGATATGCAGCTGGGTACTATAGTTACAAGTGGGCTGAGGTCTTGTCTGCTGATGCTTTCTCTGCCTTTGAGGATGCTGGATTGGATAATAGCAAGGCTGTAAAAGAAACCGGACACAAGTTCCGAGAAACGGTCCTTGCTCTTGGAGGCGGGAAAGCACCACTGGATGTTTTTGTGGAATTCCGTGGCCGTGAGCCTTCACCGGAGCCACTGCTCAGGCACAATGGCCTATTACAAGTCGCTTCTGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004222 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0005829 GO:0006465 GO:0006508 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0010035 GO:0010038 GO:0010467 GO:0016485 GO:0016787 GO:0019538 GO:0031974 GO:0034641 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043603 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044429 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0048046 GO:0050896 GO:0051604 GO:0070011 GO:0070013 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_M3

Protein Analysis

802

Amino Acids

90.07

Weight (kDa)

6.16

Isoelectric Point (pI)

52.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TOP_N	PF19310	37 - 159	1.6e-57	Neurolysin/Thimet oligopeptidase, N-terminal domain
Peptidase_M3	PF01432	239 - 653	6.1e-122	Peptidase family M3

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004392)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10540 AT5G65620 AT5G65620
fragaria_vesca	FvH4_1g19050 FvH4_1g19050 FvH4_1g19050
malus_domestica	MD01G1044200.v1.1
prunus_persica	Prupe.6G167100_v2.0.a1 Prupe.6G167100_v2.0.a1 Prupe.6G209200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0110061 RchiOBHm_Chr7g0233391
rosa_laevigata	RLG00000001272 RLG00000017783
rosa_multiflora	Rmu_co8163522.1_g000001 Rmu_co8337137.1_g000001 Rmu_sc0008806.1_g000009 Rmu_sc0009935.1_g000003 Rmu_sc0013750.1_g000001 Rmu_sc0024311.1_g000001
rosa_roxburghii	Rroxscaffold_2G00133750
rosa_rugosa	Rorug02G0165400 Rorug02G0165400
rosa_samantha	Rh2AG217200 Rh2BG227200 Rh2CG219400 Rh2DG222900 Rh7CG455700
rosa_wichuraiana	Rw0G010890 Rw2G016780 Rw7G035960 Rw7G035980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2141
Acc36I	ACCTGC	1 cut(s)	2141
Acc65I	GGTACC	1 cut(s)	1640
AccB1I	GGYRCC	2 cut(s)	475, 1640
AccBSI	CCGCTC	1 cut(s)	111
AccI	GTMKAC	1 cut(s)	306
AccII	CGCG	2 cut(s)	96, 1062
AciI	CCGC	4 cut(s)	109, 243, 291, 2304
AclWI	GGATC	5 cut(s)	1526, 1539, 1550, 2053, 2092
AcoI	YGGCCR	5 cut(s)	288, 461, 1182, 1464, 2341
AcsI	RAATTY	8 cut(s)	36, 809, 842, 1270, 1358, 1502, 1748, 2333
AcuI	CTGAAG	4 cut(s)	149, 1250, 1748, 2036
AcvI	CACGTG	1 cut(s)	1634
AfaI	GTAC	3 cut(s)	729, 1642, 2171
AfiI	CCNNNNNNNGG	8 cut(s)	535, 613, 718, 1071, 1469, 1650, 1694, 2284
AgeI	ACCGGT	2 cut(s)	498, 1020
AjiI	CACGTC	1 cut(s)	382
AjnI	CCWGG	2 cut(s)	336, 2038
AjuI	GAANNNNNNNTTGG	4 cut(s)	1103, 1135, 1216, 1248
Alw21I	GWGCWC	2 cut(s)	139, 403
Alw26I	GTCTC	5 cut(s)	121, 1336, 1692, 1727, 1869
AlwI	GGATC	5 cut(s)	1526, 1539, 1550, 2053, 2092
AlwNI	CAGNNNCTG	1 cut(s)	893
Ama87I	CYCGRG	1 cut(s)	416
ApeKI	GCWGC	6 cut(s)	299, 566, 908, 1952, 2020, 2162
ApoI	RAATTY	8 cut(s)	36, 809, 842, 1270, 1358, 1502, 1748, 2333
AsiGI	ACCGGT	2 cut(s)	498, 1020
Asp700I	GAANNNNTTC	3 cut(s)	1206, 1228, 1920
Asp718I	GGTACC	1 cut(s)	1640
AspLEI	GCGC	3 cut(s)	444, 1064, 1386
AspS9I	GGNCC	3 cut(s)	959, 983, 2287
AsuHPI	GGTGA	3 cut(s)	134, 1677, 2346
AsuII	TTCGAA	1 cut(s)	1222
AvaI	CYCGRG	1 cut(s)	416
AvaII	GGWCC	1 cut(s)	2287
BaeI	ACNNNNGTAYC	2 cut(s)	2161, 2194
BalI	TGGCCA	1 cut(s)	1184
BamHI	GGATCC	1 cut(s)	1531
BanI	GGYRCC	2 cut(s)	475, 1640
BanII	GRGCYC	3 cut(s)	52, 139, 403
BbrPI	CACGTG	1 cut(s)	1634
BbsI	GAAGAC	3 cut(s)	192, 680, 1732
Bbv12I	GWGCWC	2 cut(s)	139, 403
BbvCI	CCTCAGC	2 cut(s)	1158, 2190
BbvI	GCAGC	6 cut(s)	286, 553, 895, 1964, 2007, 2174
BccI	CCATC	6 cut(s)	153, 872, 974, 1409, 1591, 1631
BceAI	ACGGC	5 cut(s)	272, 287, 350, 1605, 2328
BcgI	CGANNNNNNTGC	2 cut(s)	995, 1029
BciT130I	CCWGG	2 cut(s)	338, 2040
BciVI	GTATCC	1 cut(s)	1817
BclI	TGATCA	1 cut(s)	2068
BcoDI	GTCTC	5 cut(s)	121, 1336, 1692, 1727, 1869
BfaI	CTAG	8 cut(s)	162, 456, 791, 899, 1068, 1211, 1430, 1614
BfmI	CTRYAG	2 cut(s)	570, 2173
BfuAI	ACCTGC	1 cut(s)	2141
BfuI	GTATCC	1 cut(s)	1817
BglI	GCCNNNNNGGC	2 cut(s)	56, 460
BglII	AGATCT	1 cut(s)	2011
BisI	GCNGC	7 cut(s)	291, 300, 567, 909, 1953, 2021, 2163
BlpI	GCTNAGC	2 cut(s)	1131, 1896
BlsI	GCNGC	7 cut(s)	292, 301, 568, 910, 1954, 2022, 2164
BmcAI	AGTACT	1 cut(s)	729
Bme1390I	CCNGG	2 cut(s)	338, 2040
Bme18I	GGWCC	1 cut(s)	2287
BmeT110I	CYCGRG	1 cut(s)	416
BmgBI	CACGTC	1 cut(s)	382
BmgT120I	GGNCC	3 cut(s)	959, 983, 2287
BmiI	GGNNCC	7 cut(s)	453, 477, 1533, 1642, 1975, 2123, 2361
BmrFI	CCNGG	2 cut(s)	338, 2040
BmrI	ACTGGG	2 cut(s)	1327, 1920
BmsI	GCATC	8 cut(s)	352, 361, 676, 820, 1279, 1816, 2197, 2218
BmuI	ACTGGG	2 cut(s)	1327, 1920
BpiI	GAAGAC	3 cut(s)	192, 680, 1732
BplI	GAGNNNNNCTC	4 cut(s)	390, 422, 673, 705
BpmI	CTGGAG	3 cut(s)	320, 1263, 1278
Bpu10I	CCTNAGC	6 cut(s)	25, 1115, 1158, 1979, 2190, 2369
Bpu1102I	GCTNAGC	2 cut(s)	1131, 1896
Bpu14I	TTCGAA	1 cut(s)	1222
BpuEI	CTTGAG	3 cut(s)	392, 518, 767
BsaAI	YACGTR	3 cut(s)	1031, 1054, 1634
BsaBI	GATNNNNATC	2 cut(s)	2050, 2067
BsaJI	CCNNGG	5 cut(s)	18, 962, 1649, 1810, 2338
BsaWI	WCCGGW	5 cut(s)	498, 1020, 1480, 2264, 2356
Bsc4I	CCNNNNNNNGG	8 cut(s)	535, 613, 718, 1071, 1469, 1650, 1694, 2284
Bse118I	RCCGGY	3 cut(s)	498, 1020, 1462
Bse1I	ACTGG	5 cut(s)	674, 1322, 1691, 1915, 2322
Bse3DI	GCAATG	1 cut(s)	1890
Bse8I	GATNNNNATC	2 cut(s)	2050, 2067
BseBI	CCWGG	2 cut(s)	338, 2040
BseDI	CCNNGG	5 cut(s)	18, 962, 1649, 1810, 2338
BseJI	GATNNNNATC	2 cut(s)	2050, 2067
BseLI	CCNNNNNNNGG	8 cut(s)	535, 613, 718, 1071, 1469, 1650, 1694, 2284
BseMI	GCAATG	1 cut(s)	1890
BseMII	CTCAG	6 cut(s)	126, 704, 1149, 1566, 2181, 2383
BseNI	ACTGG	5 cut(s)	674, 1322, 1691, 1915, 2322
BseRI	GAGGAG	7 cut(s)	111, 129, 202, 212, 310, 323, 446
BseX3I	CGGCCG	1 cut(s)	1464
BseXI	GCAGC	6 cut(s)	286, 553, 895, 1964, 2007, 2174
BseYI	CCCAGC	2 cut(s)	1706, 2165
BsgI	GTGCAG	1 cut(s)	894
Bsh1236I	CGCG	2 cut(s)	96, 1062
Bsh1285I	CGRYCG	1 cut(s)	1467
BshNI	GGYRCC	2 cut(s)	475, 1640
BshTI	ACCGGT	2 cut(s)	498, 1020
BsiEI	CGRYCG	1 cut(s)	1467
BsiHKAI	GWGCWC	2 cut(s)	139, 403
BsiHKCI	CYCGRG	1 cut(s)	416
BsiSI	CCGG	7 cut(s)	385, 499, 1021, 1463, 1481, 2265, 2357
BslFI	GGGAC	2 cut(s)	174, 1334
BslI	CCNNNNNNNGG	8 cut(s)	535, 613, 718, 1071, 1469, 1650, 1694, 2284
BsmAI	GTCTC	5 cut(s)	121, 1336, 1692, 1727, 1869
BsmFI	GGGAC	2 cut(s)	174, 1334
BsmI	GAATGC	1 cut(s)	1243
BsoBI	CYCGRG	1 cut(s)	416
Bsp119I	TTCGAA	1 cut(s)	1222
Bsp1286I	GDGCHC	3 cut(s)	52, 139, 403
Bsp143I	GATC	7 cut(s)	489, 1531, 1555, 2011, 2045, 2068, 2097
Bsp1720I	GCTNAGC	2 cut(s)	1131, 1896
BspACI	CCGC	4 cut(s)	109, 243, 291, 2304
BspCNI	CTCAG	6 cut(s)	125, 703, 1150, 1567, 2182, 2382
BspFNI	CGCG	2 cut(s)	96, 1062
BspLI	GGNNCC	7 cut(s)	453, 477, 1533, 1642, 1975, 2123, 2361
BspMI	ACCTGC	1 cut(s)	2141
BspPI	GGATC	5 cut(s)	1526, 1539, 1550, 2053, 2092
BspQI	GCTCTTC	1 cut(s)	1197
BspT104I	TTCGAA	1 cut(s)	1222
BspT107I	GGYRCC	2 cut(s)	475, 1640
BsrBI	CCGCTC	1 cut(s)	111
BsrDI	GCAATG	1 cut(s)	1890
BsrFI	RCCGGY	3 cut(s)	498, 1020, 1462
BsrI	ACTGG	5 cut(s)	674, 1322, 1691, 1915, 2322
BssAI	RCCGGY	3 cut(s)	498, 1020, 1462
BssECI	CCNNGG	5 cut(s)	18, 962, 1649, 1810, 2338
BssMI	GATC	7 cut(s)	489, 1531, 1555, 2011, 2045, 2068, 2097
BssT1I	CCWWGG	3 cut(s)	18, 962, 1649
Bst2UI	CCWGG	2 cut(s)	338, 2040
Bst4CI	ACNGT	7 cut(s)	448, 1046, 1189, 1472, 1738, 1848, 2287
Bst6I	CTCTTC	3 cut(s)	69, 1197, 1926
BstBAI	YACGTR	3 cut(s)	1031, 1054, 1634
BstBI	TTCGAA	1 cut(s)	1222
BstC8I	GCNNGC	6 cut(s)	135, 390, 461, 626, 888, 1972
BstDSI	CCRYGG	1 cut(s)	2338
BstENI	CCTNNNNNAGG	1 cut(s)	1648
BstFNI	CGCG	2 cut(s)	96, 1062
BstHHI	GCGC	3 cut(s)	444, 1064, 1386
BstKTI	GATC	7 cut(s)	492, 1534, 1558, 2014, 2048, 2071, 2100
BstMAI	GTCTC	5 cut(s)	121, 1336, 1692, 1727, 1869
BstMBI	GATC	7 cut(s)	489, 1531, 1555, 2011, 2045, 2068, 2097
BstMCI	CGRYCG	1 cut(s)	1467
BstNI	CCWGG	2 cut(s)	338, 2040
BstNSI	RCATGY	2 cut(s)	82, 1013
BstSCI	CCNGG	2 cut(s)	336, 2038
BstSFI	CTRYAG	2 cut(s)	570, 2173
BstSNI	TACGTA	1 cut(s)	1054
BstUI	CGCG	2 cut(s)	96, 1062
BstV1I	GCAGC	6 cut(s)	286, 553, 895, 1964, 2007, 2174
BstV2I	GAAGAC	3 cut(s)	192, 680, 1732
BstX2I	RGATCY	2 cut(s)	1531, 2011
BstXI	CCANNNNNNTGG	1 cut(s)	1751
BstYI	RGATCY	2 cut(s)	1531, 2011
BstZI	CGGCCG	1 cut(s)	1464
BsuI	GTATCC	1 cut(s)	1817
BtgI	CCRYGG	1 cut(s)	2338
BtrI	CACGTC	1 cut(s)	382
BtsI	GCAGTG	2 cut(s)	927, 2363
BtsIMutI	CAGTG	6 cut(s)	927, 1185, 1315, 1698, 2315, 2363
BveI	ACCTGC	1 cut(s)	2141
Cac8I	GCNNGC	6 cut(s)	135, 390, 461, 626, 888, 1972
CaiI	CAGNNNCTG	1 cut(s)	893
CfoI	GCGC	3 cut(s)	444, 1064, 1386
Cfr10I	RCCGGY	3 cut(s)	498, 1020, 1462
Cfr13I	GGNCC	3 cut(s)	959, 983, 2287
CseI	GACGC	1 cut(s)	85
CsiI	ACCWGGT	1 cut(s)	2038
Csp6I	GTAC	3 cut(s)	728, 1641, 2170
CspAI	ACCGGT	2 cut(s)	498, 1020
CviQI	GTAC	3 cut(s)	728, 1641, 2170
DpnI	GATC	7 cut(s)	491, 1533, 1557, 2013, 2047, 2070, 2099
DpnII	GATC	7 cut(s)	489, 1531, 1555, 2011, 2045, 2068, 2097
DraI	TTTAAA	1 cut(s)	646
EaeI	YGGCCR	5 cut(s)	288, 461, 1182, 1464, 2341
EagI	CGGCCG	1 cut(s)	1464
Eam1104I	CTCTTC	3 cut(s)	69, 1197, 1926
EarI	CTCTTC	3 cut(s)	69, 1197, 1926
Ecl136II	GAGCTC	2 cut(s)	137, 401
EclXI	CGGCCG	1 cut(s)	1464
Eco105I	TACGTA	1 cut(s)	1054
Eco130I	CCWWGG	3 cut(s)	18, 962, 1649
Eco147I	AGGCCT	1 cut(s)	7
Eco24I	GRGCYC	3 cut(s)	52, 139, 403
Eco32I	GATATC	1 cut(s)	1366
Eco47I	GGWCC	1 cut(s)	2287
Eco52I	CGGCCG	1 cut(s)	1464
Eco53kI	GAGCTC	2 cut(s)	137, 401
Eco57I	CTGAAG	4 cut(s)	149, 1250, 1748, 2036
Eco72I	CACGTG	1 cut(s)	1634
Eco88I	CYCGRG	1 cut(s)	416
EcoICRI	GAGCTC	2 cut(s)	137, 401
EcoNI	CCTNNNNNAGG	1 cut(s)	1648
EcoRI	GAATTC	1 cut(s)	2333
EcoRII	CCWGG	2 cut(s)	336, 2038
EcoRV	GATATC	1 cut(s)	1366
EcoT14I	CCWWGG	3 cut(s)	18, 962, 1649
EcoT22I	ATGCAT	1 cut(s)	643
EcoT38I	GRGCYC	3 cut(s)	52, 139, 403
ErhI	CCWWGG	3 cut(s)	18, 962, 1649
FalI	AAGNNNNNCTT	2 cut(s)	1216, 1248
FaqI	GGGAC	2 cut(s)	174, 1334
FauI	CCCGC	2 cut(s)	116, 2297
FauNDI	CATATG	1 cut(s)	1770
FbaI	TGATCA	1 cut(s)	2068
FblI	GTMKAC	1 cut(s)	306
Fnu4HI	GCNGC	7 cut(s)	291, 300, 567, 909, 1953, 2021, 2163
FriOI	GRGCYC	3 cut(s)	52, 139, 403
Fsp4HI	GCNGC	7 cut(s)	291, 300, 567, 909, 1953, 2021, 2163
FspBI	CTAG	8 cut(s)	162, 456, 791, 899, 1068, 1211, 1430, 1614
GlaI	GCGC	3 cut(s)	443, 1063, 1385
GluI	GCNGC	7 cut(s)	291, 300, 567, 909, 1953, 2021, 2163
GsaI	CCCAGC	2 cut(s)	1710, 2169
GsuI	CTGGAG	3 cut(s)	320, 1263, 1278
HapII	CCGG	7 cut(s)	385, 499, 1021, 1463, 1481, 2265, 2357
HgaI	GACGC	1 cut(s)	85
HhaI	GCGC	3 cut(s)	444, 1064, 1386
Hin6I	GCGC	3 cut(s)	442, 1062, 1384
HinP1I	GCGC	3 cut(s)	442, 1062, 1384
HincII	GTYRAC	3 cut(s)	307, 496, 526
HindII	GTYRAC	3 cut(s)	307, 496, 526
HindIII	AAGCTT	3 cut(s)	1112, 1133, 1943
HinfI	GANTC	8 cut(s)	394, 419, 548, 659, 1100, 1352, 1520, 2051
HpaII	CCGG	7 cut(s)	385, 499, 1021, 1463, 1481, 2265, 2357
HphI	GGTGA	3 cut(s)	134, 1677, 2346
Hpy166II	GTNNAC	3 cut(s)	307, 496, 526
Hpy8I	GTNNAC	3 cut(s)	307, 496, 526
Hpy99I	CGWCG	6 cut(s)	258, 264, 267, 308, 556, 1472
HpyAV	CCTTC	8 cut(s)	217, 289, 367, 617, 1274, 1729, 1994, 2361
HpyCH4III	ACNGT	7 cut(s)	448, 1046, 1189, 1472, 1738, 1848, 2287
HpyCH4IV	ACGT	5 cut(s)	381, 697, 1030, 1053, 1633
HpySE526I	ACGT	5 cut(s)	381, 697, 1030, 1053, 1633
HspAI	GCGC	3 cut(s)	442, 1062, 1384
KpnI	GGTACC	1 cut(s)	1644
Ksp22I	TGATCA	1 cut(s)	2068
Kzo9I	GATC	7 cut(s)	489, 1531, 1555, 2011, 2045, 2068, 2097
LguI	GCTCTTC	1 cut(s)	1197
LmnI	GCTCC	8 cut(s)	142, 451, 556, 1075, 1297, 1483, 1979, 2359
Lsp1109I	GCAGC	6 cut(s)	286, 553, 895, 1964, 2007, 2174
LweI	GCATC	8 cut(s)	352, 361, 676, 820, 1279, 1816, 2197, 2218
MabI	ACCWGGT	1 cut(s)	2038
MaeI	CTAG	8 cut(s)	162, 456, 791, 899, 1068, 1211, 1430, 1614
MaeII	ACGT	5 cut(s)	381, 697, 1030, 1053, 1633
MaeIII	GTNAC	5 cut(s)	97, 1054, 1629, 1865, 2177
MalI	GATC	7 cut(s)	491, 1533, 1557, 2013, 2047, 2070, 2099
MbiI	CCGCTC	1 cut(s)	111
MboI	GATC	7 cut(s)	489, 1531, 1555, 2011, 2045, 2068, 2097
MfeI	CAATTG	1 cut(s)	2004
MflI	RGATCY	2 cut(s)	1531, 2011
MhlI	GDGCHC	3 cut(s)	52, 139, 403
MlsI	TGGCCA	1 cut(s)	1184
MluNI	TGGCCA	1 cut(s)	1184
MlyI	GAGTC	4 cut(s)	428, 542, 1094, 1361
MmeI	TCCRAC	2 cut(s)	534, 1101
Mox20I	TGGCCA	1 cut(s)	1184
Mph1103I	ATGCAT	1 cut(s)	643
MroXI	GAANNNNTTC	3 cut(s)	1206, 1228, 1920
MscI	TGGCCA	1 cut(s)	1184
MseI	TTAA	6 cut(s)	543, 645, 771, 854, 1500, 1883
MslI	CAYNNNNRTG	3 cut(s)	83, 939, 1883
Msp20I	TGGCCA	1 cut(s)	1184
MspA1I	CMGCKG	1 cut(s)	2165
MspI	CCGG	7 cut(s)	385, 499, 1021, 1463, 1481, 2265, 2357
MspR9I	CCNGG	2 cut(s)	338, 2040
MunI	CAATTG	1 cut(s)	2004
Mva1269I	GAATGC	1 cut(s)	1243
MvaI	CCWGG	2 cut(s)	338, 2040
MvnI	CGCG	2 cut(s)	96, 1062
NdeI	CATATG	1 cut(s)	1770
NdeII	GATC	7 cut(s)	489, 1531, 1555, 2011, 2045, 2068, 2097
NlaIV	GGNNCC	7 cut(s)	453, 477, 1533, 1642, 1975, 2123, 2361
NmuCI	GTSAC	2 cut(s)	97, 1629
NsiI	ATGCAT	1 cut(s)	643
NspI	RCATGY	2 cut(s)	82, 1013
NspV	TTCGAA	1 cut(s)	1222
PaeR7I	CTCGAG	1 cut(s)	416
PaqCI	CACCTGC	1 cut(s)	2141
PceI	AGGCCT	1 cut(s)	7
PciSI	GCTCTTC	1 cut(s)	1197
PcsI	WCGNNNNNNNCGW	2 cut(s)	262, 489
PctI	GAATGC	1 cut(s)	1243
PdmI	GAANNNNTTC	3 cut(s)	1206, 1228, 1920
PfeI	GAWTC	4 cut(s)	394, 659, 1520, 2051
PfoI	TCCNGGA	1 cut(s)	336
PinAI	ACCGGT	2 cut(s)	498, 1020
PkrI	GCNGC	7 cut(s)	292, 301, 568, 910, 1954, 2022, 2164
PleI	GAGTC	4 cut(s)	427, 542, 1094, 1360
PmaCI	CACGTG	1 cut(s)	1634
PmlI	CACGTG	1 cut(s)	1634
PpsI	GAGTC	4 cut(s)	427, 542, 1094, 1360
Ppu21I	YACGTR	3 cut(s)	1031, 1054, 1634
Psp124BI	GAGCTC	2 cut(s)	139, 403
Psp6I	CCWGG	2 cut(s)	336, 2038
PspCI	CACGTG	1 cut(s)	1634
PspFI	CCCAGC	2 cut(s)	1706, 2165
PspGI	CCWGG	2 cut(s)	336, 2038
PspN4I	GGNNCC	7 cut(s)	453, 477, 1533, 1642, 1975, 2123, 2361
PspPI	GGNCC	3 cut(s)	959, 983, 2287
PspXI	VCTCGAGB	1 cut(s)	416
PstNI	CAGNNNCTG	1 cut(s)	893
PsuI	RGATCY	2 cut(s)	1531, 2011
PvuII	CAGCTG	1 cut(s)	2165
RsaI	GTAC	3 cut(s)	729, 1642, 2171
RsaNI	GTAC	3 cut(s)	728, 1641, 2170
RseI	CAYNNNNRTG	3 cut(s)	83, 939, 1883
SacI	GAGCTC	2 cut(s)	139, 403
SalI	GTCGAC	1 cut(s)	305
SapI	GCTCTTC	1 cut(s)	1197
SaqAI	TTAA	6 cut(s)	543, 645, 771, 854, 1500, 1883
SatI	GCNGC	7 cut(s)	291, 300, 567, 909, 1953, 2021, 2163
Sau3AI	GATC	7 cut(s)	489, 1531, 1555, 2011, 2045, 2068, 2097
Sau96I	GGNCC	3 cut(s)	959, 983, 2287
ScaI	AGTACT	1 cut(s)	729
SchI	GAGTC	4 cut(s)	428, 542, 1094, 1361
ScrFI	CCNGG	2 cut(s)	338, 2040
SduI	GDGCHC	3 cut(s)	52, 139, 403
SexAI	ACCWGGT	1 cut(s)	2038
SfaNI	GCATC	8 cut(s)	352, 361, 676, 820, 1279, 1816, 2197, 2218
SfcI	CTRYAG	2 cut(s)	570, 2173
Sfr274I	CTCGAG	1 cut(s)	416
SfuI	TTCGAA	1 cut(s)	1222
SinI	GGWCC	1 cut(s)	2287
SlaI	CTCGAG	1 cut(s)	416
SmiMI	CAYNNNNRTG	3 cut(s)	83, 939, 1883
SmlI	CTYRAG	4 cut(s)	407, 416, 533, 746
SmoI	CTYRAG	4 cut(s)	407, 416, 533, 746
SnaBI	TACGTA	1 cut(s)	1054
SseBI	AGGCCT	1 cut(s)	7
SsiI	CCGC	4 cut(s)	109, 243, 291, 2304
SspMI	CTAG	8 cut(s)	162, 456, 791, 899, 1068, 1211, 1430, 1614
SstI	GAGCTC	2 cut(s)	139, 403
StuI	AGGCCT	1 cut(s)	7
StyD4I	CCNGG	2 cut(s)	336, 2038
StyI	CCWWGG	3 cut(s)	18, 962, 1649
TaaI	ACNGT	7 cut(s)	448, 1046, 1189, 1472, 1738, 1848, 2287
TaiI	ACGT	5 cut(s)	384, 700, 1033, 1056, 1636
TatI	WGTACW	1 cut(s)	727
TauI	GCSGC	1 cut(s)	293
TfiI	GAWTC	4 cut(s)	394, 659, 1520, 2051
Tru1I	TTAA	6 cut(s)	543, 645, 771, 854, 1500, 1883
Tru9I	TTAA	6 cut(s)	543, 645, 771, 854, 1500, 1883
TscAI	CASTG	6 cut(s)	927, 1192, 1322, 1698, 2322, 2370
TseFI	GTSAC	2 cut(s)	97, 1629
TseI	GCWGC	6 cut(s)	299, 566, 908, 1952, 2020, 2162
Tsp45I	GTSAC	2 cut(s)	97, 1629
TspDTI	ATGAA	5 cut(s)	951, 1617, 1761, 1840, 1920
TspGWI	ACGGA	4 cut(s)	1560, 1955, 2042, 2327
TspRI	CASTG	6 cut(s)	927, 1192, 1322, 1698, 2322, 2370
VpaK11BI	GGWCC	1 cut(s)	2287
XagI	CCTNNNNNAGG	1 cut(s)	1648
XapI	RAATTY	8 cut(s)	36, 809, 842, 1270, 1358, 1502, 1748, 2333
XbaI	TCTAGA	1 cut(s)	1210
XceI	RCATGY	2 cut(s)	82, 1013
XhoI	CTCGAG	1 cut(s)	416
XmiI	GTMKAC	1 cut(s)	306
XmnI	GAANNNNTTC	3 cut(s)	1206, 1228, 1920
XspI	CTAG	8 cut(s)	162, 456, 791, 899, 1068, 1211, 1430, 1614
ZrmI	AGTACT	1 cut(s)	729
Zsp2I	ATGCAT	1 cut(s)	643

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.