Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0008806.1

Orthogroup ID

OG0004392

Physical Location & Seq

Genomic Coordinates Forward (+)

35354 .. 41638

Gene Structure 6285 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0008806.1_g000009.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2202 bp

atggcggacgctagtccccccaaccccaagaaacaagtaatcaaggactcggaagaacaatttgaggacccaacccctttgaagaaattaaaagtaggccgaacagacaacgaatctattgaaaataaccctcttcttgaagatcttcagttccctcgttttgatgctattactgcccatcacattcgcgatgggatacctatattggtgaagaagctggaagaagattttactgaattggagaatatgatagagcttggaacacaagtgacatggtctacaattgtattgccatttgagaagattgttgaacggttgactaagccttgcgagattgtctgtctccttaagaatcttaaaaactctgaaaagcttcgtgatgctcttaaagaagtcttgccactccaggtgagttttgatatgaaaatgactcaaagcaaagcaatttataaggccttcaaatctattcgagaatctcatgattgggagacaatgagtgatgcacggaaacgaatagttgaatggcatatcaaggagtcggacctggccggtatcaatcttgatgatgctaagagacagtatcttagagatattgaactgaaactagaagatcaatataaaaaatttgaggagaatgtgctagacgccacagaagcgactcaaatgctagttaccgaagtaggcaatgttttgggattggatattggtctacttcaggcggctgcggaacgagcaatattgaagggacatgaagatgcaacatctgaaaaggggccttggctattcactctcgaagattatgagcaaattatgacatatgctgaaaaccggtcttttcgtgaagaggtttacttagctcctgtaacttgtgtctcaaccggagatttaaataacactcctgtcatcgagtcaattttgtcgctcagattgcagaaggctaagcttctgggttataataactatgccgaggtaagcatgaaaacaaagtgtgctaccattgaaaaagcgaaaaatctgctagaagaactccaaaataagctttggaaagctggacttgaagagattgaagaacttaagcatattgctagagaacagaaagctgaagaagctgaggacttcaggccttgggacaccgccttttggacagaactgctacttgaaaccaaagttccaggctatcaggagggcacaaaccgttacttcatctattccgatgtcatggatgcactattctacctagcatctgtgatgttcgacattcatattgcacctgctgatggcacagctccggtttggcacaaggatgtgaaattatattctgtctcagattctcacaccactgttggatacgtatatttcgatccattttctcgccctgagaaaatgggaggggcagcgacgggtggattcttttccagaactgtagattatgacatgagttctagaaggttgcctatggcatacatttactgtaatataagtcggccatcaaaggggagcaatcggatttttatgtcttttgatgaggtgcgaactcttttccatgaatttggacatgcatttcagcatgtactgacaaagcaagatgaagtactagtggctggttttcagaagatagagcaagattgtgttgaggtaccctccacattcatggaaaaatggtgttaccacggggacactttaagaagaattgcaggagttcaaccgaagagaaaagggaaaaaagggagaagaggtggaaacttgcagcctcttaaagataaaactccaattttggatactcttgatgagataaggacggcaattgttgatttagagctgcatacaagttatacaccttctgggtcagagtctattcatgatgtttatcttcgaccacgaagtgtgattcctatacatcctggggacaagtcaattttgcggcggcgtcccttggctccgatctgcagcagggcgctccagcgtcgttttccagaccaagggggacgagacttcgatctcgggttgcgttgtggtcgagcccgttcttggttctttccggctgcgttgtggtcaccggcagtggtcggcattaggcttttgggggaggctcttcctgcatcatcggtttccagtcggagtgaatcggcgtcgggactagaagaggagatcggtcgtggtttcggaactagaagaggagcgagatcggagctttcctactag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004222 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0005829 GO:0006465 GO:0006508 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0010035 GO:0010038 GO:0010467 GO:0016485 GO:0016787 GO:0019538 GO:0031974 GO:0034641 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043603 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044429 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0048046 GO:0050896 GO:0051604 GO:0070011 GO:0070013 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_M3

Protein Analysis

733

Amino Acids

83.45

Weight (kDa)

5.81

Isoelectric Point (pI)

57.21

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004392)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10540 AT5G65620 AT5G65620
fragaria_vesca	FvH4_1g19050 FvH4_1g19050 FvH4_1g19050
malus_domestica	MD01G1044200.v1.1
prunus_persica	Prupe.6G167100_v2.0.a1 Prupe.6G167100_v2.0.a1 Prupe.6G209200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0110061 RchiOBHm_Chr7g0233391
rosa_laevigata	RLG00000001272 RLG00000017783
rosa_multiflora	Rmu_co8163522.1_g000001 Rmu_co8337137.1_g000001 Rmu_sc0008806.1_g000009 Rmu_sc0009935.1_g000003 Rmu_sc0013750.1_g000001 Rmu_sc0024311.1_g000001
rosa_roxburghii	Rroxscaffold_2G00133750
rosa_rugosa	Rorug02G0165400 Rorug02G0165400
rosa_samantha	Rh2AG217200 Rh2BG227200 Rh2CG219400 Rh2DG222900 Rh7CG455700
rosa_wichuraiana	Rw0G010890 Rw2G016780 Rw7G035960 Rw7G035980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	450, 954
AarI	CACCTGC	1 cut(s)	1279
Acc36I	ACCTGC	1 cut(s)	1279
Acc65I	GGTACC	1 cut(s)	1636
AccB1I	GGYRCC	1 cut(s)	1636
AccI	GTMKAC	2 cut(s)	278, 709
AccII	CGCG	1 cut(s)	189
AciI	CCGC	6 cut(s)	5, 719, 725, 1134, 1921, 1924
AclWI	GGATC	1 cut(s)	1355
AcoI	YGGCCR	2 cut(s)	546, 1484
AcsI	RAATTY	2 cut(s)	623, 1547
AcuI	CTGAAG	4 cut(s)	131, 698, 1102, 1122
AcyI	GRCGYC	3 cut(s)	645, 1927, 2129
AdeI	CACNNNGTG	1 cut(s)	1883
AfaI	GTAC	3 cut(s)	1572, 1593, 1638
AfiI	CCNNNNNNNGG	5 cut(s)	1140, 1277, 1493, 1979, 2028
AflII	CTTAAG	2 cut(s)	347, 1073
AgeI	ACCGGT	1 cut(s)	828
AhlI	ACTAGT	1 cut(s)	1594
AjnI	CCWGG	4 cut(s)	405, 543, 1171, 1900
Alw26I	GTCTC	6 cut(s)	347, 482, 568, 877, 1327, 1983
AlwI	GGATC	1 cut(s)	1355
Ama87I	CYCGRG	1 cut(s)	2000
AoxI	GGCC	6 cut(s)	97, 453, 546, 773, 1121, 1484
ApeKI	GCWGC	6 cut(s)	722, 1394, 1747, 1819, 1947, 2042
ApoI	RAATTY	2 cut(s)	623, 1547
AsiGI	ACCGGT	1 cut(s)	828
Asp700I	GAANNNNTTC	2 cut(s)	144, 372
Asp718I	GGTACC	1 cut(s)	1636
AspLEI	GCGC	1 cut(s)	1957
AspS9I	GGNCC	3 cut(s)	67, 541, 773
AsuHPI	GGTGA	3 cut(s)	220, 421, 2046
AvaI	CYCGRG	1 cut(s)	2000
AvaII	GGWCC	2 cut(s)	67, 541
BaeGI	GKGCMC	1 cut(s)	1190
BanI	GGYRCC	1 cut(s)	1636
BanII	GRGCYC	1 cut(s)	2023
BbvCI	CCTCAGC	1 cut(s)	1110
BbvI	GCAGC	6 cut(s)	709, 1406, 1759, 1806, 1959, 2029
BccI	CCATC	4 cut(s)	185, 186, 1271, 1495
BceAI	ACGGC	1 cut(s)	1815
BcgI	CGANNNNNNTGC	4 cut(s)	646, 680, 997, 1031
BciT130I	CCWGG	4 cut(s)	407, 545, 1173, 1902
BciVI	GTATCC	3 cut(s)	189, 1340, 1771
BcoDI	GTCTC	6 cut(s)	347, 482, 568, 877, 1327, 1983
BcuI	ACTAGT	1 cut(s)	1594
BfmI	CTRYAG	2 cut(s)	1422, 1945
BfoI	RGCGCY	1 cut(s)	1958
BfrI	CTTAAG	2 cut(s)	347, 1073
BfuAI	ACCTGC	1 cut(s)	1279
BfuI	GTATCC	3 cut(s)	189, 1340, 1771
BglII	AGATCT	1 cut(s)	142
BisI	GCNGC	9 cut(s)	720, 723, 1395, 1748, 1820, 1922, 1925, 1948, 2043
BlpI	GCTNAGC	1 cut(s)	939
BlsI	GCNGC	9 cut(s)	721, 724, 1396, 1749, 1821, 1923, 1926, 1949, 2044
BmcAI	AGTACT	1 cut(s)	1593
Bme1390I	CCNGG	4 cut(s)	407, 545, 1173, 1902
Bme18I	GGWCC	2 cut(s)	67, 541
BmeT110I	CYCGRG	1 cut(s)	2000
BmgT120I	GGNCC	3 cut(s)	67, 541, 773
BmiI	GGNNCC	4 cut(s)	69, 774, 1638, 1938
BmrFI	CCNGG	4 cut(s)	407, 545, 1173, 1902
BmsI	GCATC	8 cut(s)	154, 370, 490, 556, 745, 1213, 1250, 2108
BoxI	GACNNNNGTC	1 cut(s)	12
BplI	GAGNNNNNCTC	2 cut(s)	1625, 1657
BpmI	CTGGAG	2 cut(s)	389, 1943
Bpu10I	CCTNAGC	1 cut(s)	1110
Bpu1102I	GCTNAGC	1 cut(s)	939
BsaAI	YACGTR	1 cut(s)	1351
BsaBI	GATNNNNATC	1 cut(s)	1866
BsaHI	GRCGYC	3 cut(s)	645, 1927, 2129
BsaJI	CCNNGG	7 cut(s)	776, 966, 1124, 1669, 1901, 1932, 1978
BsaWI	WCCGGW	3 cut(s)	828, 878, 1288
BsaXI	ACNNNNNCTCC	2 cut(s)	1720, 1750
Bsc4I	CCNNNNNNNGG	5 cut(s)	1140, 1277, 1493, 1979, 2028
Bse118I	RCCGGY	3 cut(s)	548, 828, 2056
Bse1I	ACTGG	1 cut(s)	2112
Bse3DI	GCAATG	1 cut(s)	691
Bse8I	GATNNNNATC	1 cut(s)	1866
BseBI	CCWGG	4 cut(s)	407, 545, 1173, 1902
BseDI	CCNNGG	7 cut(s)	776, 966, 1124, 1669, 1901, 1932, 1978
BseGI	GGATG	3 cut(s)	1228, 1309, 1897
BseJI	GATNNNNATC	1 cut(s)	1866
BseLI	CCNNNNNNNGG	5 cut(s)	1140, 1277, 1493, 1979, 2028
BseMI	GCAATG	1 cut(s)	691
BseMII	CTCAG	4 cut(s)	937, 1101, 1338, 1368
BseNI	ACTGG	1 cut(s)	2112
BseRI	GAGGAG	3 cut(s)	644, 2159, 2190
BseSI	GKGCMC	1 cut(s)	1190
BseXI	GCAGC	6 cut(s)	709, 1406, 1759, 1806, 1959, 2029
Bsh1236I	CGCG	1 cut(s)	189
Bsh1285I	CGRYCG	1 cut(s)	2155
BshFI	GGCC	6 cut(s)	99, 455, 548, 775, 1123, 1486
BshNI	GGYRCC	1 cut(s)	1636
BshTI	ACCGGT	1 cut(s)	828
BsiEI	CGRYCG	1 cut(s)	2155
BsiHKCI	CYCGRG	1 cut(s)	2000
BsiSI	CCGG	6 cut(s)	549, 829, 879, 1289, 2039, 2057
BslFI	GGGAC	7 cut(s)	759, 1142, 1688, 1914, 1919, 1998, 2148
BslI	CCNNNNNNNGG	5 cut(s)	1140, 1277, 1493, 1979, 2028
BsmAI	GTCTC	6 cut(s)	347, 482, 568, 877, 1327, 1983
BsmFI	GGGAC	7 cut(s)	759, 1142, 1688, 1914, 1919, 1998, 2148
BsnI	GGCC	6 cut(s)	99, 455, 548, 775, 1123, 1486
BsoBI	CYCGRG	1 cut(s)	2000
Bsp1286I	GDGCHC	2 cut(s)	1190, 2023
Bsp143I	GATC	7 cut(s)	142, 610, 1360, 1941, 1996, 2148, 2183
Bsp1720I	GCTNAGC	1 cut(s)	939
Bsp68I	TCGCGA	1 cut(s)	189
BspACI	CCGC	6 cut(s)	5, 719, 725, 1134, 1921, 1924
BspANI	GGCC	6 cut(s)	99, 455, 548, 775, 1123, 1486
BspCNI	CTCAG	4 cut(s)	936, 1102, 1337, 1369
BspFNI	CGCG	1 cut(s)	189
BspHI	TCATGA	2 cut(s)	478, 1858
BspLI	GGNNCC	4 cut(s)	69, 774, 1638, 1938
BspMAI	CTGCAG	1 cut(s)	1949
BspMI	ACCTGC	1 cut(s)	1279
BspPI	GGATC	1 cut(s)	1355
BspQI	GCTCTTC	1 cut(s)	2097
BspT107I	GGYRCC	1 cut(s)	1636
BspTI	CTTAAG	2 cut(s)	347, 1073
BsrDI	GCAATG	1 cut(s)	691
BsrFI	RCCGGY	3 cut(s)	548, 828, 2056
BsrI	ACTGG	1 cut(s)	2112
BssAI	RCCGGY	3 cut(s)	548, 828, 2056
BssECI	CCNNGG	7 cut(s)	776, 966, 1124, 1669, 1901, 1932, 1978
BssMI	GATC	7 cut(s)	142, 610, 1360, 1941, 1996, 2148, 2183
BssNI	GRCGYC	3 cut(s)	645, 1927, 2129
BssT1I	CCWWGG	4 cut(s)	776, 1124, 1932, 1978
Bst2UI	CCWGG	4 cut(s)	407, 545, 1173, 1902
Bst4CI	ACNGT	6 cut(s)	315, 579, 1196, 1342, 1423, 1472
Bst6I	CTCTTC	8 cut(s)	138, 837, 1053, 1703, 1726, 2097, 2136, 2167
BstACI	GRCGYC	3 cut(s)	645, 1927, 2129
BstAFI	CTTAAG	2 cut(s)	347, 1073
BstBAI	YACGTR	1 cut(s)	1351
BstDEI	CTNAG	9 cut(s)	321, 570, 584, 853, 923, 939, 1110, 1324, 1377
BstDSI	CCRYGG	1 cut(s)	1669
BstEII	GGTNACC	1 cut(s)	2052
BstF5I	GGATG	3 cut(s)	1228, 1309, 1897
BstFNI	CGCG	1 cut(s)	189
BstH2I	RGCGCY	1 cut(s)	1958
BstHHI	GCGC	1 cut(s)	1957
BstKTI	GATC	7 cut(s)	145, 613, 1363, 1944, 1999, 2151, 2186
BstMAI	GTCTC	6 cut(s)	347, 482, 568, 877, 1327, 1983
BstMBI	GATC	7 cut(s)	142, 610, 1360, 1941, 1996, 2148, 2183
BstMCI	CGRYCG	1 cut(s)	2155
BstMWI	GCNNNNNNNGC	6 cut(s)	173, 653, 731, 928, 1106, 2096
BstNI	CCWGG	4 cut(s)	407, 545, 1173, 1902
BstNSI	RCATGY	2 cut(s)	1559, 1571
BstPAI	GACNNNNGTC	1 cut(s)	12
BstPI	GGTNACC	1 cut(s)	2052
BstSCI	CCNGG	4 cut(s)	405, 543, 1171, 1900
BstSFI	CTRYAG	2 cut(s)	1422, 1945
BstSLI	GKGCMC	1 cut(s)	1190
BstSNI	TACGTA	1 cut(s)	1351
BstUI	CGCG	1 cut(s)	189
BstV1I	GCAGC	6 cut(s)	709, 1406, 1759, 1806, 1959, 2029
BstX2I	RGATCY	1 cut(s)	142
BstXI	CCANNNNNNTGG	2 cut(s)	1550, 1651
BstYI	RGATCY	1 cut(s)	142
BsuI	GTATCC	3 cut(s)	189, 1340, 1771
BsuRI	GGCC	6 cut(s)	99, 455, 548, 775, 1123, 1486
BtgI	CCRYGG	1 cut(s)	1669
BtgZI	GCGATG	1 cut(s)	204
BtsCI	GGATG	3 cut(s)	1228, 1309, 1897
BtsI	GCAGTG	1 cut(s)	2067
BtsIMutI	CAGTG	2 cut(s)	1338, 2067
BtuMI	TCGCGA	1 cut(s)	189
BveI	ACCTGC	1 cut(s)	1279
CciI	TCATGA	2 cut(s)	478, 1858
CfoI	GCGC	1 cut(s)	1957
Cfr10I	RCCGGY	3 cut(s)	548, 828, 2056
Cfr13I	GGNCC	3 cut(s)	67, 541, 773
CseI	GACGC	5 cut(s)	17, 653, 1916, 1952, 2118
Csp6I	GTAC	3 cut(s)	1571, 1592, 1637
CspAI	ACCGGT	1 cut(s)	828
CviQI	GTAC	3 cut(s)	1571, 1592, 1637
DdeI	CTNAG	9 cut(s)	321, 570, 584, 853, 923, 939, 1110, 1324, 1377
DpnI	GATC	7 cut(s)	144, 612, 1362, 1943, 1998, 2150, 2185
DpnII	GATC	7 cut(s)	142, 610, 1360, 1941, 1996, 2148, 2183
DraI	TTTAAA	1 cut(s)	888
DraIII	CACNNNGTG	1 cut(s)	1883
EaeI	YGGCCR	2 cut(s)	546, 1484
Eam1104I	CTCTTC	8 cut(s)	138, 837, 1053, 1703, 1726, 2097, 2136, 2167
EarI	CTCTTC	8 cut(s)	138, 837, 1053, 1703, 1726, 2097, 2136, 2167
EciI	GGCGGA	1 cut(s)	20
Eco105I	TACGTA	1 cut(s)	1351
Eco130I	CCWWGG	4 cut(s)	776, 1124, 1932, 1978
Eco147I	AGGCCT	2 cut(s)	455, 1123
Eco24I	GRGCYC	1 cut(s)	2023
Eco47I	GGWCC	2 cut(s)	67, 541
Eco57I	CTGAAG	4 cut(s)	131, 698, 1102, 1122
Eco88I	CYCGRG	1 cut(s)	2000
Eco91I	GGTNACC	1 cut(s)	2052
EcoO109I	RGGNCCY	2 cut(s)	67, 773
EcoO65I	GGTNACC	1 cut(s)	2052
EcoRII	CCWGG	4 cut(s)	405, 543, 1171, 1900
EcoT14I	CCWWGG	4 cut(s)	776, 1124, 1932, 1978
EcoT22I	ATGCAT	1 cut(s)	1561
EcoT38I	GRGCYC	1 cut(s)	2023
ErhI	CCWWGG	4 cut(s)	776, 1124, 1932, 1978
FalI	AAGNNNNNCTT	2 cut(s)	1038, 1070
FaqI	GGGAC	7 cut(s)	759, 1142, 1688, 1914, 1919, 1998, 2148
FauNDI	CATATG	1 cut(s)	817
FblI	GTMKAC	2 cut(s)	278, 709
Fnu4HI	GCNGC	9 cut(s)	720, 723, 1395, 1748, 1820, 1922, 1925, 1948, 2043
FokI	GGATG	3 cut(s)	1235, 1316, 1884
FriOI	GRGCYC	1 cut(s)	2023
Fsp4HI	GCNGC	9 cut(s)	720, 723, 1395, 1748, 1820, 1922, 1925, 1948, 2043
GlaI	GCGC	1 cut(s)	1956
GluI	GCNGC	9 cut(s)	720, 723, 1395, 1748, 1820, 1922, 1925, 1948, 2043
GsuI	CTGGAG	2 cut(s)	389, 1943
HaeII	RGCGCY	1 cut(s)	1958
HaeIII	GGCC	6 cut(s)	99, 455, 548, 775, 1123, 1486
HapII	CCGG	6 cut(s)	549, 829, 879, 1289, 2039, 2057
HgaI	GACGC	5 cut(s)	17, 653, 1916, 1952, 2118
HhaI	GCGC	1 cut(s)	1957
Hin1I	GRCGYC	3 cut(s)	645, 1927, 2129
Hin6I	GCGC	1 cut(s)	1955
HinP1I	GCGC	1 cut(s)	1955
HincII	GTYRAC	1 cut(s)	318
HindII	GTYRAC	1 cut(s)	318
HindIII	AAGCTT	3 cut(s)	371, 941, 1037
HpaII	CCGG	6 cut(s)	549, 829, 879, 1289, 2039, 2057
HphI	GGTGA	3 cut(s)	220, 421, 2046
Hpy166II	GTNNAC	4 cut(s)	279, 318, 710, 850
Hpy8I	GTNNAC	4 cut(s)	279, 318, 710, 850
Hpy99I	CGWCG	3 cut(s)	1402, 1968, 2134
HpyAV	CCTTC	5 cut(s)	466, 736, 928, 1440, 1848
HpyCH4III	ACNGT	6 cut(s)	315, 579, 1196, 1342, 1423, 1472
HpyCH4IV	ACGT	1 cut(s)	1350
HpyF10VI	GCNNNNNNNGC	6 cut(s)	173, 653, 731, 928, 1106, 2096
HpyF3I	CTNAG	9 cut(s)	321, 570, 584, 853, 923, 939, 1110, 1324, 1377
HpySE526I	ACGT	1 cut(s)	1350
Hsp92I	GRCGYC	3 cut(s)	645, 1927, 2129
HspAI	GCGC	1 cut(s)	1955
KpnI	GGTACC	1 cut(s)	1640
Kzo9I	GATC	7 cut(s)	142, 610, 1360, 1941, 1996, 2148, 2183
LguI	GCTCTTC	1 cut(s)	2097
LmnI	GCTCC	7 cut(s)	862, 1291, 1497, 1942, 1962, 2177, 2188
Lsp1109I	GCAGC	6 cut(s)	709, 1406, 1759, 1806, 1959, 2029
LweI	GCATC	8 cut(s)	154, 370, 490, 556, 745, 1213, 1250, 2108
MaeII	ACGT	1 cut(s)	1350
MaeIII	GTNAC	6 cut(s)	268, 670, 862, 1196, 1664, 2052
MalI	GATC	7 cut(s)	144, 612, 1362, 1943, 1998, 2150, 2185
MboI	GATC	7 cut(s)	142, 610, 1360, 1941, 1996, 2148, 2183
MfeI	CAATTG	2 cut(s)	282, 1803
MflI	RGATCY	1 cut(s)	142
MhlI	GDGCHC	2 cut(s)	1190, 2023
MlyI	GAGTC	6 cut(s)	41, 424, 545, 652, 917, 1859
MmeI	TCCRAC	3 cut(s)	519, 1324, 2096
Mph1103I	ATGCAT	1 cut(s)	1561
MroXI	GAANNNNTTC	2 cut(s)	144, 372
MseI	TTAA	8 cut(s)	89, 348, 357, 387, 887, 1074, 1682, 1755
MslI	CAYNNNNRTG	3 cut(s)	753, 1302, 1649
MspCI	CTTAAG	2 cut(s)	347, 1073
MspI	CCGG	6 cut(s)	549, 829, 879, 1289, 2039, 2057
MspR9I	CCNGG	4 cut(s)	407, 545, 1173, 1902
MunI	CAATTG	2 cut(s)	282, 1803
MvaI	CCWGG	4 cut(s)	407, 545, 1173, 1902
MvnI	CGCG	1 cut(s)	189
MwoI	GCNNNNNNNGC	6 cut(s)	173, 653, 731, 928, 1106, 2096
NdeI	CATATG	1 cut(s)	817
NdeII	GATC	7 cut(s)	142, 610, 1360, 1941, 1996, 2148, 2183
NlaIV	GGNNCC	4 cut(s)	69, 774, 1638, 1938
NmeAIII	GCCGAG	1 cut(s)	991
NmuCI	GTSAC	2 cut(s)	268, 2052
NruI	TCGCGA	1 cut(s)	189
NsiI	ATGCAT	1 cut(s)	1561
NspI	RCATGY	2 cut(s)	1559, 1571
PagI	TCATGA	2 cut(s)	478, 1858
PaqCI	CACCTGC	1 cut(s)	1279
PceI	AGGCCT	2 cut(s)	455, 1123
PciSI	GCTCTTC	1 cut(s)	2097
PcsI	WCGNNNNNNNCGW	1 cut(s)	1356
PdmI	GAANNNNTTC	2 cut(s)	144, 372
PfeI	GAWTC	7 cut(s)	113, 352, 473, 1328, 1407, 1888, 2123
PflFI	GACNNNGTC	1 cut(s)	274
PinAI	ACCGGT	1 cut(s)	828
PkrI	GCNGC	9 cut(s)	721, 724, 1396, 1749, 1821, 1923, 1926, 1949, 2044
PleI	GAGTC	6 cut(s)	41, 424, 544, 652, 916, 1858
PpsI	GAGTC	6 cut(s)	41, 424, 544, 652, 916, 1858
Ppu21I	YACGTR	1 cut(s)	1351
PpuMI	RGGWCCY	1 cut(s)	67
PshAI	GACNNNNGTC	1 cut(s)	12
PsiI	TTATAA	2 cut(s)	450, 954
Psp5II	RGGWCCY	1 cut(s)	67
Psp6I	CCWGG	4 cut(s)	405, 543, 1171, 1900
PspEI	GGTNACC	1 cut(s)	2052
PspGI	CCWGG	4 cut(s)	405, 543, 1171, 1900
PspN4I	GGNNCC	4 cut(s)	69, 774, 1638, 1938
PspPI	GGNCC	3 cut(s)	67, 541, 773
PspPPI	RGGWCCY	1 cut(s)	67
PstI	CTGCAG	1 cut(s)	1949
PsuI	RGATCY	1 cut(s)	142
PsyI	GACNNNGTC	1 cut(s)	274
RruI	TCGCGA	1 cut(s)	189
RsaI	GTAC	3 cut(s)	1572, 1593, 1638
RsaNI	GTAC	3 cut(s)	1571, 1592, 1637
RseI	CAYNNNNRTG	3 cut(s)	753, 1302, 1649
SapI	GCTCTTC	1 cut(s)	2097
SaqAI	TTAA	8 cut(s)	89, 348, 357, 387, 887, 1074, 1682, 1755
SatI	GCNGC	9 cut(s)	720, 723, 1395, 1748, 1820, 1922, 1925, 1948, 2043
Sau3AI	GATC	7 cut(s)	142, 610, 1360, 1941, 1996, 2148, 2183
Sau96I	GGNCC	3 cut(s)	67, 541, 773
ScaI	AGTACT	1 cut(s)	1593
SchI	GAGTC	6 cut(s)	41, 424, 545, 652, 917, 1859
ScrFI	CCNGG	4 cut(s)	407, 545, 1173, 1902
SduI	GDGCHC	2 cut(s)	1190, 2023
SfaNI	GCATC	8 cut(s)	154, 370, 490, 556, 745, 1213, 1250, 2108
SfcI	CTRYAG	2 cut(s)	1422, 1945
SinI	GGWCC	2 cut(s)	67, 541
SmiI	ATTTAAAT	1 cut(s)	888
SmiMI	CAYNNNNRTG	3 cut(s)	753, 1302, 1649
SmlI	CTYRAG	2 cut(s)	347, 1073
SmoI	CTYRAG	2 cut(s)	347, 1073
SnaBI	TACGTA	1 cut(s)	1351
SpeI	ACTAGT	1 cut(s)	1594
SseBI	AGGCCT	2 cut(s)	455, 1123
SsiI	CCGC	6 cut(s)	5, 719, 725, 1134, 1921, 1924
SspI	AATATT	1 cut(s)	738
StuI	AGGCCT	2 cut(s)	455, 1123
StyD4I	CCNGG	4 cut(s)	405, 543, 1171, 1900
StyI	CCWWGG	4 cut(s)	776, 1124, 1932, 1978
SwaI	ATTTAAAT	1 cut(s)	888
TaaI	ACNGT	6 cut(s)	315, 579, 1196, 1342, 1423, 1472
TaiI	ACGT	1 cut(s)	1353
TaqI	TCGA	8 cut(s)	469, 792, 906, 1254, 1359, 1873, 1995, 2017
TaqII	GACCGA	1 cut(s)	2141
TatI	WGTACW	2 cut(s)	1570, 1591
TauI	GCSGC	3 cut(s)	722, 1924, 1927
TfiI	GAWTC	7 cut(s)	113, 352, 473, 1328, 1407, 1888, 2123
Tru1I	TTAA	8 cut(s)	89, 348, 357, 387, 887, 1074, 1682, 1755
Tru9I	TTAA	8 cut(s)	89, 348, 357, 387, 887, 1074, 1682, 1755
TscAI	CASTG	2 cut(s)	1345, 2067
TseFI	GTSAC	2 cut(s)	268, 2052
TseI	GCWGC	6 cut(s)	722, 1394, 1747, 1819, 1947, 2042
Tsp45I	GTSAC	2 cut(s)	268, 2052
TspDTI	ATGAA	9 cut(s)	437, 765, 992, 1192, 1250, 1560, 1602, 1639, 1847
TspGWI	ACGGA	1 cut(s)	520
TspRI	CASTG	2 cut(s)	1345, 2067
Tth111I	GACNNNGTC	1 cut(s)	274
Vha464I	CTTAAG	2 cut(s)	347, 1073
VpaK11BI	GGWCC	2 cut(s)	67, 541
XapI	RAATTY	2 cut(s)	623, 1547
XbaI	TCTAGA	1 cut(s)	1442
XceI	RCATGY	2 cut(s)	1559, 1571
XmiI	GTMKAC	2 cut(s)	278, 709
XmnI	GAANNNNTTC	2 cut(s)	144, 372
ZrmI	AGTACT	1 cut(s)	1593
Zsp2I	ATGCAT	1 cut(s)	1561

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.