Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0004392

Physical Location & Seq

Genomic Coordinates Forward (+)

54064238 .. 54078242

Gene Structure 14005 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G035980.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2091 bp

ATGGCGGACGCTAGTCCCCCCAACCCCAAGAAACAAGTAATCAAGGACTCGGAAGAACAATTTGAGGACCCAACCCCTTTGAAGAAATTAAAAGTAGGCCGAACAGACAACGAATCTATTGAAAATAACCCTCTTCTTGAAGATCTTCAGTTCCCTCGTTTTGATGCTATTACTGCCCATCACATTCGCGATGGGATAACTATATTGTTGCAGAAGCTGGAAGAAGATTTTACTAAATTGGAGAATATGATAGAGCTTGGAGCAGAACCGACATGGTCTACAGTTGTGTTGCCATTTAAGAAGATTGTTGAACGGATGATTGAGCCTTGCGAGATTGTTGGTCTCCTTAAGAATCTTAAAGACTCTGAAGAGCTTCGTGATGCTCTTAAAAAAGTCTTGCCATTGAAGGTGAAGTTTAATATGAAATTGACTCAAAGCAAAGCAATTTATAAGGCCTTCACAGCTATTCGAGAATCTCATGATTGGGAGACAATGAGTGATGCTAGGAAACGAATAGTTGAATGGCATATCAAGGAGTCAGACCTGGCCGGTATCAATCTTGATGATGATAAGAGAGAGTATCTTAGAGATATTGAACAGAAGCTACAAAATCAATATGAAATTTTTGAGGAGAATGTACTAGACGCCAGAACAGAAAAGCTAGTTACCATAGCAGGCAGTGTTTTGGGATTGCCAATTGCTCTACTTAAATTAGCTGCGGAACGAGCAAGATTGAAGGGACATAAAAAAGCAACGACTAAAAAGGGGCCTTGGCTATTCACTCTCGAAGATTATGAGTGTATTCAGATGTATGCTCGAGAACGGTCTTTTCGTGAAGAAGTTTACTTAGCTTTTGTAACTTCTCTCTCAACTGGAGATTTTGATAATACTCCAGTCATCAAGTCAATTTTGGAACTCAGATTGCAGAAGGCTAAGCTTCTCAATTATAATAACTATGCTGAGGTAAGCATGAAAACAAAGTGTGCTACCACTGAAAAAGCGAAAAATCTGCTAAAAGAACTCCAAAATAAGCTTTGGAAAGCTGGACTTGAAGAGATTGAAGAACTTAAGCATATGGCTAGAGAACAGAATGCTGAAGAAGCTGAGGACTTCAGGCCTTGGGACAATGCCTTTTGGAGAGAACTGCTACTTGAAACAAAAGTTCCAGGCTATAAGGAGGGCAGGAATCGATACTTCATCTTTCCTGATGTCATGGATGCACTACTTCACTTGTCATATGTGTTGTTTGAAATTCATATTGCAGAGGCCGATGGCACAACTCCGGTTTGGGATAGAGATGTGAAATTGTATTCCATCTCAGATTCTCACAGTACCATTGGATATATATTTTTTGATCCATTCTCTCGCCCTGAGAAAATAGGCGAGGCAGCAACGGGTGGATTTTTTTCCAGAAGTGTAGACTATGATGGGAACTCTAAAAGGCTGCCTATGGCATACATATTCTGCAATCTAAGTCGGCCAGCAAAAGAGAGTGCTCAGATTCTTATGCTTTTTGAGGAGGTACGAGTTGTTTTCCATGAATTTGGTCATGCATTTCAGCATGTATTGACAAAGCAAGATGAATCGCTAGTGGCTGGTTTTCGGAATATAGAGCAAGATTGTATTGAAGTACCCTCCACATTCATGGAAAAATGGTGTTACCACAAGGACACTTTTATGAGAATTGCGGGAGGTGCAAACTTGCAGCCTCTTAAAGATAAAACTCCAATTTGCGATACTCTTGATGAGATAAGGACGGCAATGGTTGATTTGGAGCTACATACGAGTTGCATACCTTTTGGGTTAGAGTCTATCCATGCTGCTTATCTCAGACCACCACAGCTGATTCGTCTACATCCTCGTGACAGATCATTCTGCAGTTGGTGGTCTGAGATGTTTTCGGCCGATGCTTTTTCGGCATTTGAAGGTGCTGGACTGGACGATGAAAAGGTTCTCACAACAAAAGGGTGCAAGTTTCGAGATTTCGTTCTTGCTGTTGGAGGTGGGAAAGCACCCGAAAAGGTTTTTGAGGATTTTCTAGGACGTCAACCTACATTGGACGCACTTGTCAAGCACAAGCTTAGTTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004222 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0005829 GO:0006465 GO:0006508 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0010035 GO:0010038 GO:0010467 GO:0016485 GO:0016787 GO:0019538 GO:0031974 GO:0034641 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043603 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044429 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0048046 GO:0050896 GO:0051604 GO:0070011 GO:0070013 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_M3

Protein Analysis

696

Amino Acids

80.04

Weight (kDa)

5.63

Isoelectric Point (pI)

45.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TOP_N	PF19310	66 - 192	1.5e-36	Neurolysin/Thimet oligopeptidase, N-terminal domain
Peptidase_M3	PF01432	269 - 596	7.4e-63	Peptidase family M3
Peptidase_M3	PF01432	629 - 692	2.1e-06	Peptidase family M3

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004392)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10540 AT5G65620 AT5G65620
fragaria_vesca	FvH4_1g19050 FvH4_1g19050 FvH4_1g19050
malus_domestica	MD01G1044200.v1.1
prunus_persica	Prupe.6G167100_v2.0.a1 Prupe.6G167100_v2.0.a1 Prupe.6G209200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0110061 RchiOBHm_Chr7g0233391
rosa_laevigata	RLG00000001272 RLG00000017783
rosa_multiflora	Rmu_co8163522.1_g000001 Rmu_co8337137.1_g000001 Rmu_sc0008806.1_g000009 Rmu_sc0009935.1_g000003 Rmu_sc0013750.1_g000001 Rmu_sc0024311.1_g000001
rosa_roxburghii	Rroxscaffold_2G00133750
rosa_rugosa	Rorug02G0165400 Rorug02G0165400
rosa_samantha	Rh2AG217200 Rh2BG227200 Rh2CG219400 Rh2DG222900 Rh7CG455700
rosa_wichuraiana	Rw0G010890 Rw2G016780 Rw7G035960 Rw7G035980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	450, 948
AasI	GACNNNNNNGTC	1 cut(s)	2066
AatII	GACGTC	1 cut(s)	2047
AccI	GTMKAC	3 cut(s)	278, 1419, 1852
AccII	CGCG	1 cut(s)	189
AciI	CCGC	3 cut(s)	5, 719, 1688
AclWI	GGATC	1 cut(s)	1349
AcoI	YGGCCR	3 cut(s)	546, 1478, 1902
AcsI	RAATTY	3 cut(s)	621, 1251, 1541
AcuI	CTGAAG	4 cut(s)	131, 387, 1096, 1116
AcyI	GRCGYC	2 cut(s)	645, 2044
AfaI	GTAC	4 cut(s)	639, 1333, 1524, 1632
AflII	CTTAAG	2 cut(s)	347, 1067
AjnI	CCWGG	2 cut(s)	543, 1165
Alw21I	GWGCWC	1 cut(s)	1498
Alw26I	GTCTC	2 cut(s)	347, 482
AlwI	GGATC	1 cut(s)	1349
AlwNI	CAGNNNCTG	1 cut(s)	217
Ama87I	CYCGRG	1 cut(s)	816
AoxI	GGCC	8 cut(s)	97, 453, 546, 767, 1115, 1266, 1478, 1902
ApeKI	GCWGC	5 cut(s)	716, 1388, 1444, 1705, 1820
ApoI	RAATTY	3 cut(s)	621, 1251, 1541
Asp700I	GAANNNNTTC	3 cut(s)	144, 372, 1950
AspS9I	GGNCC	2 cut(s)	67, 767
AsuHPI	GGTGA	1 cut(s)	421
AvaI	CYCGRG	1 cut(s)	816
AvaII	GGWCC	1 cut(s)	67
BauI	CACGAG	1 cut(s)	1860
Bbv12I	GWGCWC	1 cut(s)	1498
BbvCI	CCTCAGC	2 cut(s)	960, 1104
BbvI	GCAGC	5 cut(s)	703, 1400, 1431, 1717, 1807
BccI	CCATC	5 cut(s)	185, 186, 1265, 1322, 1421
BceAI	ACGGC	1 cut(s)	1773
BcgI	CGANNNNNNTGC	2 cut(s)	991, 1025
BciT130I	CCWGG	2 cut(s)	545, 1167
BcoDI	GTCTC	2 cut(s)	347, 482
BfaI	CTAG	7 cut(s)	12, 504, 641, 662, 1080, 1589, 2039
BfmI	CTRYAG	2 cut(s)	279, 1876
BfrI	CTTAAG	2 cut(s)	347, 1067
BglII	AGATCT	1 cut(s)	142
BisI	GCNGC	5 cut(s)	717, 1389, 1445, 1706, 1821
BlpI	GCTNAGC	1 cut(s)	933
BlsI	GCNGC	5 cut(s)	718, 1390, 1446, 1707, 1822
Bme1390I	CCNGG	2 cut(s)	545, 1167
Bme18I	GGWCC	1 cut(s)	67
BmeT110I	CYCGRG	1 cut(s)	816
BmgT120I	GGNCC	2 cut(s)	67, 767
BmiI	GGNNCC	2 cut(s)	69, 768
BmrFI	CCNGG	2 cut(s)	545, 1167
BmsI	GCATC	5 cut(s)	154, 370, 490, 1207, 1897
BoxI	GACNNNNGTC	1 cut(s)	12
BpmI	CTGGAG	2 cut(s)	876, 894
Bpu10I	CCTNAGC	2 cut(s)	960, 1104
Bpu1102I	GCTNAGC	1 cut(s)	933
Bsa29I	ATCGAT	1 cut(s)	1189
BsaHI	GRCGYC	2 cut(s)	645, 2044
BsaI	GGTCTC	1 cut(s)	347
BsaJI	CCNNGG	2 cut(s)	770, 1118
BsaWI	WCCGGW	1 cut(s)	1282
Bse118I	RCCGGY	1 cut(s)	548
Bse1I	ACTGG	3 cut(s)	877, 893, 1941
Bse3DI	GCAATG	1 cut(s)	1767
BseBI	CCWGG	2 cut(s)	545, 1167
BseCI	ATCGAT	1 cut(s)	1189
BseDI	CCNNGG	2 cut(s)	770, 1118
BseGI	GGATG	3 cut(s)	321, 1222, 1855
BseMI	GCAATG	1 cut(s)	1767
BseMII	CTCAG	8 cut(s)	931, 951, 1095, 1332, 1362, 1511, 1843, 1881
BseNI	ACTGG	3 cut(s)	877, 893, 1941
BseRI	GAGGAG	2 cut(s)	644, 1532
BseX3I	CGGCCG	1 cut(s)	1902
BseXI	GCAGC	5 cut(s)	703, 1400, 1431, 1717, 1807
Bsh1236I	CGCG	1 cut(s)	189
Bsh1285I	CGRYCG	1 cut(s)	1905
BshFI	GGCC	8 cut(s)	99, 455, 548, 769, 1117, 1268, 1480, 1904
BshVI	ATCGAT	1 cut(s)	1189
BsiEI	CGRYCG	1 cut(s)	1905
BsiHKAI	GWGCWC	1 cut(s)	1498
BsiHKCI	CYCGRG	1 cut(s)	816
BsiSI	CCGG	2 cut(s)	549, 1283
BslFI	GGGAC	2 cut(s)	753, 1136
BsmAI	GTCTC	2 cut(s)	347, 482
BsmFI	GGGAC	2 cut(s)	753, 1136
BsmI	GAATGC	1 cut(s)	1096
BsnI	GGCC	8 cut(s)	99, 455, 548, 769, 1117, 1268, 1480, 1904
Bso31I	GGTCTC	1 cut(s)	347
BsoBI	CYCGRG	1 cut(s)	816
Bsp1286I	GDGCHC	1 cut(s)	1498
Bsp143I	GATC	3 cut(s)	142, 1354, 1868
Bsp1720I	GCTNAGC	1 cut(s)	933
Bsp68I	TCGCGA	1 cut(s)	189
BspACI	CCGC	3 cut(s)	5, 719, 1688
BspANI	GGCC	8 cut(s)	99, 455, 548, 769, 1117, 1268, 1480, 1904
BspCNI	CTCAG	8 cut(s)	930, 952, 1096, 1331, 1363, 1510, 1842, 1882
BspDI	ATCGAT	1 cut(s)	1189
BspFNI	CGCG	1 cut(s)	189
BspHI	TCATGA	1 cut(s)	478
BspLI	GGNNCC	2 cut(s)	69, 768
BspMAI	CTGCAG	1 cut(s)	1880
BspPI	GGATC	1 cut(s)	1349
BspQI	GCTCTTC	1 cut(s)	363
BspTI	CTTAAG	2 cut(s)	347, 1067
BspTNI	GGTCTC	1 cut(s)	347
BsrDI	GCAATG	1 cut(s)	1767
BsrFI	RCCGGY	1 cut(s)	548
BsrI	ACTGG	3 cut(s)	877, 893, 1941
BssAI	RCCGGY	1 cut(s)	548
BssECI	CCNNGG	2 cut(s)	770, 1118
BssMI	GATC	3 cut(s)	142, 1354, 1868
BssNI	GRCGYC	2 cut(s)	645, 2044
BssSI	CACGAG	1 cut(s)	1860
BssT1I	CCWWGG	2 cut(s)	770, 1118
Bst2BI	CACGAG	1 cut(s)	1860
Bst2UI	CCWGG	2 cut(s)	545, 1167
Bst4CI	ACNGT	3 cut(s)	283, 825, 1331
Bst6I	CTCTTC	3 cut(s)	138, 363, 1047
BstACI	GRCGYC	2 cut(s)	645, 2044
BstAFI	CTTAAG	2 cut(s)	347, 1067
BstC8I	GCNNGC	2 cut(s)	676, 1482
BstF5I	GGATG	3 cut(s)	321, 1222, 1855
BstFNI	CGCG	1 cut(s)	189
BstKTI	GATC	3 cut(s)	145, 1357, 1871
BstMAI	GTCTC	2 cut(s)	347, 482
BstMBI	GATC	3 cut(s)	142, 1354, 1868
BstMCI	CGRYCG	1 cut(s)	1905
BstMWI	GCNNNNNNNGC	6 cut(s)	173, 461, 725, 1100, 1694, 1916
BstNI	CCWGG	2 cut(s)	545, 1167
BstNSI	RCATGY	1 cut(s)	1565
BstPAI	GACNNNNGTC	1 cut(s)	12
BstSCI	CCNGG	2 cut(s)	543, 1165
BstSFI	CTRYAG	2 cut(s)	279, 1876
BstUI	CGCG	1 cut(s)	189
BstV1I	GCAGC	5 cut(s)	703, 1400, 1431, 1717, 1807
BstX2I	RGATCY	1 cut(s)	142
BstXI	CCANNNNNNTGG	2 cut(s)	1544, 1645
BstYI	RGATCY	1 cut(s)	142
BstZI	CGGCCG	1 cut(s)	1902
Bsu15I	ATCGAT	1 cut(s)	1189
BsuRI	GGCC	8 cut(s)	99, 455, 548, 769, 1117, 1268, 1480, 1904
BsuTUI	ATCGAT	1 cut(s)	1189
BtgZI	GCGATG	1 cut(s)	204
BtsCI	GGATG	3 cut(s)	321, 1222, 1855
BtsI	GCAGTG	1 cut(s)	685
BtsIMutI	CAGTG	2 cut(s)	685, 990
BtuMI	TCGCGA	1 cut(s)	189
Cac8I	GCNNGC	2 cut(s)	676, 1482
CaiI	CAGNNNCTG	1 cut(s)	217
CciI	TCATGA	1 cut(s)	478
Cfr10I	RCCGGY	1 cut(s)	548
Cfr13I	GGNCC	2 cut(s)	67, 767
ClaI	ATCGAT	1 cut(s)	1189
CseI	GACGC	3 cut(s)	17, 653, 2069
Csp6I	GTAC	4 cut(s)	638, 1332, 1523, 1631
CviAII	CATG	9 cut(s)	273, 479, 970, 1213, 1538, 1550, 1562, 1645, 1817
CviQI	GTAC	4 cut(s)	638, 1332, 1523, 1631
DpnI	GATC	3 cut(s)	144, 1356, 1870
DpnII	GATC	3 cut(s)	142, 1354, 1868
DrdI	GACNNNNNNGTC	1 cut(s)	2066
DseDI	GACNNNNNNGTC	1 cut(s)	2066
EaeI	YGGCCR	3 cut(s)	546, 1478, 1902
EagI	CGGCCG	1 cut(s)	1902
Eam1104I	CTCTTC	3 cut(s)	138, 363, 1047
EarI	CTCTTC	3 cut(s)	138, 363, 1047
EciI	GGCGGA	1 cut(s)	20
EclXI	CGGCCG	1 cut(s)	1902
Eco130I	CCWWGG	2 cut(s)	770, 1118
Eco147I	AGGCCT	2 cut(s)	455, 1117
Eco31I	GGTCTC	1 cut(s)	347
Eco47I	GGWCC	1 cut(s)	67
Eco52I	CGGCCG	1 cut(s)	1902
Eco57I	CTGAAG	4 cut(s)	131, 387, 1096, 1116
Eco88I	CYCGRG	1 cut(s)	816
EcoO109I	RGGNCCY	2 cut(s)	67, 767
EcoRII	CCWGG	2 cut(s)	543, 1165
EcoT14I	CCWWGG	2 cut(s)	770, 1118
EcoT22I	ATGCAT	1 cut(s)	1555
ErhI	CCWWGG	2 cut(s)	770, 1118
FaeI	CATG	9 cut(s)	276, 482, 973, 1216, 1541, 1553, 1565, 1648, 1820
FalI	AAGNNNNNCTT	2 cut(s)	1032, 1064
FaqI	GGGAC	2 cut(s)	753, 1136
FatI	CATG	9 cut(s)	272, 478, 969, 1212, 1537, 1549, 1561, 1644, 1816
FauI	CCCGC	1 cut(s)	1681
FauNDI	CATATG	2 cut(s)	1074, 1237
FblI	GTMKAC	3 cut(s)	278, 1419, 1852
Fnu4HI	GCNGC	5 cut(s)	717, 1389, 1445, 1706, 1821
FokI	GGATG	3 cut(s)	328, 1229, 1842
Fsp4HI	GCNGC	5 cut(s)	717, 1389, 1445, 1706, 1821
FspBI	CTAG	7 cut(s)	12, 504, 641, 662, 1080, 1589, 2039
GluI	GCNGC	5 cut(s)	717, 1389, 1445, 1706, 1821
GsuI	CTGGAG	2 cut(s)	876, 894
HaeIII	GGCC	8 cut(s)	99, 455, 548, 769, 1117, 1268, 1480, 1904
HapII	CCGG	2 cut(s)	549, 1283
HgaI	GACGC	3 cut(s)	17, 653, 2069
Hin1I	GRCGYC	2 cut(s)	645, 2044
Hin1II	CATG	9 cut(s)	276, 482, 973, 1216, 1541, 1553, 1565, 1648, 1820
HincII	GTYRAC	1 cut(s)	2048
HindII	GTYRAC	1 cut(s)	2048
HindIII	AAGCTT	3 cut(s)	935, 1031, 2078
HpaII	CCGG	2 cut(s)	549, 1283
HphI	GGTGA	1 cut(s)	421
Hpy166II	GTNNAC	5 cut(s)	279, 844, 1420, 1853, 2048
Hpy8I	GTNNAC	5 cut(s)	279, 844, 1420, 1853, 2048
HpyAV	CCTTC	5 cut(s)	400, 466, 730, 922, 1919
HpyCH4III	ACNGT	3 cut(s)	283, 825, 1331
HpyCH4IV	ACGT	1 cut(s)	2044
HpyF10VI	GCNNNNNNNGC	6 cut(s)	173, 461, 725, 1100, 1694, 1916
HpySE526I	ACGT	1 cut(s)	2044
Hsp92I	GRCGYC	2 cut(s)	645, 2044
Hsp92II	CATG	9 cut(s)	276, 482, 973, 1216, 1541, 1553, 1565, 1648, 1820
Kzo9I	GATC	3 cut(s)	142, 1354, 1868
LguI	GCTCTTC	1 cut(s)	363
LmnI	GCTCC	2 cut(s)	260, 1774
Lsp1109I	GCAGC	5 cut(s)	703, 1400, 1431, 1717, 1807
LweI	GCATC	5 cut(s)	154, 370, 490, 1207, 1897
MaeI	CTAG	7 cut(s)	12, 504, 641, 662, 1080, 1589, 2039
MaeII	ACGT	1 cut(s)	2044
MaeIII	GTNAC	4 cut(s)	664, 856, 1658, 1862
MalI	GATC	3 cut(s)	144, 1356, 1870
MboI	GATC	3 cut(s)	142, 1354, 1868
MfeI	CAATTG	1 cut(s)	696
MflI	RGATCY	1 cut(s)	142
MhlI	GDGCHC	1 cut(s)	1498
MlyI	GAGTC	5 cut(s)	41, 356, 424, 545, 1817
MmeI	TCCRAC	1 cut(s)	1978
Mph1103I	ATGCAT	1 cut(s)	1555
MroXI	GAANNNNTTC	3 cut(s)	144, 372, 1950
MseI	TTAA	9 cut(s)	89, 297, 348, 357, 387, 417, 708, 1068, 1713
MslI	CAYNNNNRTG	3 cut(s)	1643, 1676, 1860
MspA1I	CMGCKG	1 cut(s)	1843
MspCI	CTTAAG	2 cut(s)	347, 1067
MspI	CCGG	2 cut(s)	549, 1283
MspR9I	CCNGG	2 cut(s)	545, 1167
MunI	CAATTG	1 cut(s)	696
Mva1269I	GAATGC	1 cut(s)	1096
MvaI	CCWGG	2 cut(s)	545, 1167
MvnI	CGCG	1 cut(s)	189
MwoI	GCNNNNNNNGC	6 cut(s)	173, 461, 725, 1100, 1694, 1916
NdeI	CATATG	2 cut(s)	1074, 1237
NdeII	GATC	3 cut(s)	142, 1354, 1868
NlaIII	CATG	9 cut(s)	276, 482, 973, 1216, 1541, 1553, 1565, 1648, 1820
NlaIV	GGNNCC	2 cut(s)	69, 768
NmuCI	GTSAC	1 cut(s)	1862
NruI	TCGCGA	1 cut(s)	189
NsiI	ATGCAT	1 cut(s)	1555
NspI	RCATGY	1 cut(s)	1565
PaeR7I	CTCGAG	1 cut(s)	816
PagI	TCATGA	1 cut(s)	478
PceI	AGGCCT	2 cut(s)	455, 1117
PciSI	GCTCTTC	1 cut(s)	363
PcsI	WCGNNNNNNNCGW	1 cut(s)	829
PctI	GAATGC	1 cut(s)	1096
PdmI	GAANNNNTTC	3 cut(s)	144, 372, 1950
PfeI	GAWTC	8 cut(s)	113, 352, 473, 1186, 1322, 1501, 1583, 1846
PflFI	GACNNNGTC	1 cut(s)	274
PkrI	GCNGC	5 cut(s)	718, 1390, 1446, 1707, 1822
PleI	GAGTC	5 cut(s)	41, 356, 424, 544, 1816
PpsI	GAGTC	5 cut(s)	41, 356, 424, 544, 1816
PpuMI	RGGWCCY	1 cut(s)	67
PshAI	GACNNNNGTC	1 cut(s)	12
PsiI	TTATAA	2 cut(s)	450, 948
Psp5II	RGGWCCY	1 cut(s)	67
Psp6I	CCWGG	2 cut(s)	543, 1165
PspGI	CCWGG	2 cut(s)	543, 1165
PspN4I	GGNNCC	2 cut(s)	69, 768
PspPI	GGNCC	2 cut(s)	67, 767
PspPPI	RGGWCCY	1 cut(s)	67
PsrI	GAACNNNNNNTAC	2 cut(s)	588, 620
PstI	CTGCAG	1 cut(s)	1880
PstNI	CAGNNNCTG	1 cut(s)	217
PsuI	RGATCY	1 cut(s)	142
PsyI	GACNNNGTC	1 cut(s)	274
PvuII	CAGCTG	1 cut(s)	1843
RruI	TCGCGA	1 cut(s)	189
RsaI	GTAC	4 cut(s)	639, 1333, 1524, 1632
RsaNI	GTAC	4 cut(s)	638, 1332, 1523, 1631
RseI	CAYNNNNRTG	3 cut(s)	1643, 1676, 1860
SapI	GCTCTTC	1 cut(s)	363
SaqAI	TTAA	9 cut(s)	89, 297, 348, 357, 387, 417, 708, 1068, 1713
SatI	GCNGC	5 cut(s)	717, 1389, 1445, 1706, 1821
Sau3AI	GATC	3 cut(s)	142, 1354, 1868
Sau96I	GGNCC	2 cut(s)	67, 767
SchI	GAGTC	5 cut(s)	41, 356, 424, 545, 1817
ScrFI	CCNGG	2 cut(s)	545, 1167
SduI	GDGCHC	1 cut(s)	1498
SfaNI	GCATC	5 cut(s)	154, 370, 490, 1207, 1897
SfcI	CTRYAG	2 cut(s)	279, 1876
Sfr274I	CTCGAG	1 cut(s)	816
SinI	GGWCC	1 cut(s)	67
SlaI	CTCGAG	1 cut(s)	816
SmiMI	CAYNNNNRTG	3 cut(s)	1643, 1676, 1860
SmlI	CTYRAG	3 cut(s)	347, 816, 1067
SmoI	CTYRAG	3 cut(s)	347, 816, 1067
SseBI	AGGCCT	2 cut(s)	455, 1117
SsiI	CCGC	3 cut(s)	5, 719, 1688
SspMI	CTAG	7 cut(s)	12, 504, 641, 662, 1080, 1589, 2039
StuI	AGGCCT	2 cut(s)	455, 1117
StyD4I	CCNGG	2 cut(s)	543, 1165
StyI	CCWWGG	2 cut(s)	770, 1118
TaaI	ACNGT	3 cut(s)	283, 825, 1331
TaiI	ACGT	1 cut(s)	2047
TaqI	TCGA	5 cut(s)	469, 786, 817, 1189, 1978
TatI	WGTACW	1 cut(s)	637
TfiI	GAWTC	8 cut(s)	113, 352, 473, 1186, 1322, 1501, 1583, 1846
Tru1I	TTAA	9 cut(s)	89, 297, 348, 357, 387, 417, 708, 1068, 1713
Tru9I	TTAA	9 cut(s)	89, 297, 348, 357, 387, 417, 708, 1068, 1713
TscAI	CASTG	2 cut(s)	685, 997
TseFI	GTSAC	1 cut(s)	1862
TseI	GCWGC	5 cut(s)	716, 1388, 1444, 1705, 1820
Tsp45I	GTSAC	1 cut(s)	1862
TspDTI	ATGAA	9 cut(s)	437, 633, 986, 1186, 1244, 1554, 1596, 1633, 1959
TspGWI	ACGGA	1 cut(s)	328
TspRI	CASTG	2 cut(s)	685, 997
Tth111I	GACNNNGTC	1 cut(s)	274
Vha464I	CTTAAG	2 cut(s)	347, 1067
VpaK11BI	GGWCC	1 cut(s)	67
XapI	RAATTY	3 cut(s)	621, 1251, 1541
XceI	RCATGY	1 cut(s)	1565
XhoI	CTCGAG	1 cut(s)	816
XmiI	GTMKAC	3 cut(s)	278, 1419, 1852
XmnI	GAANNNNTTC	3 cut(s)	144, 372, 1950
XspI	CTAG	7 cut(s)	12, 504, 641, 662, 1080, 1589, 2039
ZraI	GACGTC	1 cut(s)	2045
Zsp2I	ATGCAT	1 cut(s)	1555

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.